BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg470736 Length=1304 Score E Sequences producing significant alignments: (Bits) Value AT1G07160.1 | Symbols: | Protein phosphatase 2C family protein... 1766 0.0 > AT1G07160.1 | Symbols: | Protein phosphatase 2C family protein | chr1:2197908-2199748 REVERSE LENGTH=1460 Length=1460 Score = 1766 bits (956), Expect = 0.0 Identities = 1162/1259 (92%), Gaps = 24/1259 (2%) Strand=Plus/Plus Query 1 AAAAAGTAAACTTTTAAGTTTTATACGAAACGATGTCGTTTTCAGTTGCCGTTTGCAACT 60 |||||| ||||||||||||||| |||||||||||||||| |||||||||||||||||||| Sbjct 39 AAAAAGGAAACTTTTAAGTTTTCTACGAAACGATGTCGTCTTCAGTTGCCGTTTGCAACT 98 Query 61 CGCCGGTGTTCTCTCCGTCCTCGTCACTTTTCTGCAACAAACCGTTGATCATTTCTCCTG 120 | ||||||||||||||||| ||||| |||||||||||||||||||||| || |||||| | Sbjct 99 CACCGGTGTTCTCTCCGTCTTCGTCTCTTTTCTGCAACAAACCGTTGAACACTTCTCCGG 158 Query 121 CGCATGAAACCCTAACCCTGTCTCTTTCCCATCTCAATCCTCCCGTTTCTTCTCCTTCTA 180 | ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct 159 CACATGAAACCCTAACCCTGTCTCTTTCCCATCTCAATCCTCCCGTTTCTTCTACTTCTC 218 Query 181 CTTCCTCTGCTGCGTCTCCCACATCTCCGTTCTGCCTCCGTCTCCCGAAACCACAGGCTA 240 ||| | | || |||||||||||||||||||||||||||||||||| |||||| | ||||| Sbjct 219 CTT-C-C-GCCGCGTCTCCCACATCTCCGTTCTGCCTCCGTCTCCTGAAACCGCCGGCTA 275 Query 241 AACAAGGGTTTGGATCCGACCCTGGTCCCGGAGGCGTTCTTAAGAGGAAACGACCGATGA 300 ||| |||||||||||| ||| ||||||| ||| || |||| |||||||||||||||| || Sbjct 276 AACTAGGGTTTGGATCGGACTCTGGTCCGGGAAGCATTCTGAAGAGGAAACGACCGACGA 335 Query 301 GGCTTGATATACCGGTGGCTCCGGTTGGCATTGCAGCTCCGATATCGGAAACGGCGGTGA 360 ||||||||||||||||||||||||||| ||||||||||| ||| | | || Sbjct 336 CGCTTGATATACCGGTGGCTCCGGTTGGTATTGCAGCTCC--TAT-----A--TC---GA 383 Query 361 ATGCACAGACGCCGAGGGAGGAGAGCAGAG-AGGTGGAGAGGGAAGGTGATGGTTACTCG 419 ||||| | ||||||||||||||||| |||| | |||||||||||||||||||||||||| Sbjct 384 ATGCAGATACGCCGAGGGAGGAGAGTAGAGCA-GTGGAGAGGGAAGGTGATGGTTACTCT 442 Query 420 GTTTATTGCAAGAGAGGTAAAAGAGCAGCTATGGAGGATCGTTTCTCTGCCATCACAAAT 479 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||| Sbjct 443 GTTTATTGCAAGAGAGGTAAAAGAGAAGCTATGGAGGATCGTTTCTCTGCCATCACTAAT 502 Query 480 ATTCAAGGAGAACCCAAAAAGGCAATATTCGGAGTCTATGATGGTCATGGAGGACCAATA 539 |||||||||| |||||| |||||||||||||||||||||||||||| |||||||||| | Sbjct 503 CTTCAAGGAGATCCCAAACAGGCAATATTCGGAGTCTATGATGGTCACGGAGGACCAACA 562 Query 540 GCGGCTGAGTTTGCGGCTAAGAACTTGTGTAATAACATTCTAGGAGAGATAGTTGGTGGG 599 ||||||||||||||||||||||||||||||| ||||||||| || ||||||||||||||| Sbjct 563 GCGGCTGAGTTTGCGGCTAAGAACTTGTGTAGTAACATTCTTGGCGAGATAGTTGGTGGG 622 Query 600 GGGAACGAGTCAAAGTTTGAAGAAGCAGTAAAACGTGGTTATCTAGCGACTGATTCTGAG 659 |||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||| Sbjct 623 AGGAACGAGTCAAAGATTGAAGAAGCTGTAAAACGTGGTTATCTAGCGACTGATTCTGAG 682 Query 660 TTTCTCAAGGAAAAAGACGTTAAGGGCGGCTCGTGCTGTGTCACGGCTCTGATCAGCGAC 719 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 683 TTTCTCAAGGAAAAAAACGTTAAGGGCGGCTCGTGCTGTGTCACGGCTCTGATCAGCGAC 742 Query 720 GGGAATCTTGTGGTTGCCAATGCTGGTGACTGCCGTGCTGTTTTGAGCGTTGGAGGATAC 779 || ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| | Sbjct 743 GGAAATCTTGTGGTGGCCAATGCTGGTGACTGCCGTGCTGTTTTGAGCGTTGGAGGATTC 802 Query 780 GCGGAAGCCCTGACTTCTGACCACCGACCTTCGAGGGACGATGAACGAAACAGAATTGAG 839 ||||| ||| |||||||||||||||| ||||| || || ||||||||||||||||||||| Sbjct 803 GCGGAGGCCTTGACTTCTGACCACCGCCCTTCCAGAGATGATGAACGAAACAGAATTGAG 862 Query 840 AGCTCGGGCGGTTATGTCGATACATTCAATAGTGTTTGGAGAATCCAAGGATCTTTAGCG 899 ||||||||||||||||| |||||||||||||||||||||||||| |||||||| |||||| Sbjct 863 AGCTCGGGCGGTTATGTGGATACATTCAATAGTGTTTGGAGAATTCAAGGATCATTAGCG 922 Query 900 GTATCTAGAGGAATAGGAGATGCTCATCTCAAACAATGGATAATATCTGAACCAGAGACA 959 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 923 GTATCTAGAGGAATAGGAGATGCTCATCTCAAACAATGGATAATATCTGAACCAGAGATA 982 Query 960 AAGATTCTCCGAATCAATCCCCAACACGAGTTCTTGATCTTAGCATCAGACGGTCTATGG 1019 || ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 983 AATATTCTCCGAATCAATCCCCAACACGAGTTCTTGATCTTAGCATCAGATGGTCTATGG 1042 Query 1020 GACAAGGTTAGTAATCAGGAGGCAGTAGACATAGCTCGACCATTTTGCATAGGAATCGAT 1079 ||||||||||||||||||||||||||||||||||||||||||||||||| ||| | |||| Sbjct 1043 GACAAGGTTAGTAATCAGGAGGCAGTAGACATAGCTCGACCATTTTGCAAAGGGACCGAT 1102 Query 1080 CAAAAACGGAAGCCATTGTTAGCTTGCAAGAAGCTCGTTGACCTCTCTGTATCACGAGGC 1139 || ||||||||||||||| | ||||||||||||||||||||||||||||||||||||||| Sbjct 1103 CAGAAACGGAAGCCATTGCTGGCTTGCAAGAAGCTCGTTGACCTCTCTGTATCACGAGGC 1162 Query 1140 TCCTTGGACGATATTAGTGTGATGTTGGTTCCGTTGTGCCGCTTCTTCTGACCATAGGAG 1199 ||||||||||||||||||||||||||| ||| |||||||| | ||||||||||||||||| Sbjct 1163 TCCTTGGACGATATTAGTGTGATGTTGATTCAGTTGTGCCACCTCTTCTGACCATAGGAG 1222 Query 1200 AAATGTACAGACAAGATAACAATCTAGACGTTAGAGTTTGAAGTCATTCTTAATT-CTT 1257 ||||||| ||||| || | || | | |||||||||| ||||||||||||||||| ||| Sbjct 1223 AAATGTAGAGACA-GA-AT-AA-C-A-ACGTTAGAGTCTGAAGTCATTCTTAATTTCTT 1275 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 64156296510 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5