BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg470760 Length=3070 Score E Sequences producing significant alignments: (Bits) Value AT1G07390.3 | Symbols: AtRLP1, RLP1 | receptor like protein 1 |... 2270 0.0 > AT1G07390.3 | Symbols: AtRLP1, RLP1 | receptor like protein 1 | chr1:2269893-2274820 FORWARD LENGTH=3418 Length=3418 Score = 2270 bits (1229), Expect = 0.0 Identities = 1384/1460 (95%), Gaps = 5/1460 (0%) Strand=Plus/Plus Query 1612 AGGGTTATGAAGCTCTCCAACAATCAATTACAGGGGAAAATATTTCCTAAGCATGCAAAC 1671 |||||| |||||||||||||||||||||||||||||||||||||| | ||||||||||| Sbjct 1813 AGGGTTCTGAAGCTCTCCAACAATCAATTACAGGGGAAAATATTTTCGAAGCATGCAAAT 1872 Query 1672 CTTACTGGTTTAGTAGGGCTTTTTCTTGATGGCAACAATTTTACTGGGAGTCTCGGAGAA 1731 |||||||||||||| |||||||||||||||||||||||||||||||||||||| | ||| Sbjct 1873 CTTACTGGTTTAGTTGGGCTTTTTCTTGATGGCAACAATTTTACTGGGAGTCTTGAAGAG 1932 Query 1732 GGTCTATTGAAGTCAAAGAATCTAACTCTTTTAGACATATCAGATAATAGGTTTTCGGGC 1791 ||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct 1933 GGTTTATTGAAGTCAAAGAATCTTACTCTTTTAGACATATCAGATAATAGGTTTTCGGGC 1992 Query 1792 ATGCTTCCGCGTTGGATTGGTAGGATGTCATGGCTTTCCTACCTATACATGAGTGGTAAT 1851 |||||||| | ||||||||||||||| ||| ||||||||||||||||||||||||||||| Sbjct 1993 ATGCTTCCACTTTGGATTGGTAGGATATCAAGGCTTTCCTACCTATACATGAGTGGTAAT 2052 Query 1852 CAGCTAAAAGGTCCTTTCCCTTTTCAACAACAGAGTCCTTGGGTTGAGGTTATGGACATC 1911 ||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||| Sbjct 2053 CAGCTAAAAGGTCCTTTCCCTTTTCTACGACAGAGTCCTTGGGTTGAGGTTATGGACATC 2112 Query 1912 TCACACAATAGCTTCTCTGGTTTGATACCAAGGAATGTGAATTTTCCATCTCTCAGAGAA 1971 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct 2113 TCACACAATAGCTTCTCTGGTTCGATACCAAGGAATGTGAATTTTCCATCTCTCAGAGAA 2172 Query 1972 TTAAGACTACAAAACAATGAGTTTATGGGTTCAGTTCCGGGCAATTTATTCAATGCTGCG 2031 |||||||||||||||||||||||| ||||| ||||||||| ||||||||||| |||||| Sbjct 2173 CTAAGACTACAAAACAATGAGTTTACGGGTTTAGTTCCGGGAAATTTATTCAAGGCTGCG 2232 Query 2032 GGATTAGAAGTGCTTGATTTGCGTAACAACAACTTTTCTGGAAAGATACTGAACACTATT 2091 ||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||| Sbjct 2233 GGATTAGAAGTGCTTGATTTGCGGAACAACAATTTTTCTGGAAAGATACTGAACACTATT 2292 Query 2092 GACCAGACATCTAAGTTACGCATTCTTCTTCTACGGAATAACAGCTTTCGAACTTATATT 2151 |||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||| Sbjct 2293 GACCAGACATCTAAGTTACGTATTCTTCTTCTACGGAATAACAGCTTTCAAACTTATATC 2352 Query 2152 CCTGGGAAAATATGTCAGCTAAGTGAAGTTGGTCTCTTGGACTTGTCTCACAATCAATTC 2211 ||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||| Sbjct 2353 CCTGGGAAAATATGTCAGCTAAGTGAAGTTGGTCTGTTAGACTTGTCTCACAATCAATTC 2412 Query 2212 AGAGGCCCCATACCATCATGTTTCAGTAAAATGTCTTTTGGTGCAGAGCAGAATAACGGT 2271 |||||||||||||||||||||||||||||||||||||||||||||||||||||| || || Sbjct 2413 AGAGGCCCCATACCATCATGTTTCAGTAAAATGTCTTTTGGTGCAGAGCAGAATGACCGT 2472 Query 2272 ACCATGTCACTTGTTGCAGATTTTGACTTCTCAGACATTACATTCTTGCGACATTGTCAT 2331 ||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||| Sbjct 2473 ACCATGTCACTTGTTGCAGATTTTGACTTCTCATACATTACATTCTTGCCACATTGTCAA 2532 Query 2332 TATGCATCACATCTTAACTTGGATGATGGTGTCAGGAATGGTTATCAACCAAAACCAGCA 2391 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2533 TATGGATCACATCTTAACTTGGATGATGGTGTCAGGAATGGTTATCAACCAAAACCAGCA 2592 Query 2392 ACCGTAGTGGATTTTTTAACGAAAAGCAGATATGAGGCGTATCAAGGTGATATTCTCCGC 2451 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2593 ACCGTAGTGGATTTTTTAACGAAAAGCAGATATGAGGCGTATCAAGGTGATATTCTCCGC 2652 Query 2452 TATATGCATGGTCTGGATTTGTCGAGCAACGAACTATCGGGTGAAATTCCAATTGAGATT 2511 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 2653 TATATGCATGGTCTGGATTTGTCGAGCAACGAACTATCGGGTGAAATTCCAATCGAGATT 2712 Query 2512 GGAGATCTTGAGAATATCAGATCCCTGAATTTGTCAAGCAATCGCCTCACAGGCTCCATA 2571 ||||||||| |||||||||| ||||||||||||||||| || |||||||||||||||||| Sbjct 2713 GGAGATCTTCAGAATATCAGGTCCCTGAATTTGTCAAGTAACCGCCTCACAGGCTCCATA 2772 Query 2572 CCAGATAGCATT-CAAAAGCTGAAGGGCTTAGAGAGTCTTGATCTATCCAATAATAAGCT 2630 |||||||||||| |||| ||||||||||||||||||||||||||||||||| |||||||| Sbjct 2773 CCAGATAGCATTTCAAA-GCTGAAGGGCTTAGAGAGTCTTGATCTATCCAACAATAAGCT 2831 Query 2631 CTATGGAAGCATCCCTCCTATGCTAGCCGATCTCAACAGTTTAGGATACTTTAACATTTC 2690 ||||||| ||||||||| |||||||||||||||||||||||||||||| || || || Sbjct 2832 AGATGGAAGTATCCCTCCTGCGCTAGCCGATCTCAACAGTTTAGGATACTTGAATATCTC 2891 Query 2691 ATATAACAATTTATCAGGTGAAATCCCTTTCAAAGGCCATCTTGTAACCTTTGACGAGAG 2750 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 2892 ATATAACAATTTATCAGGTGAAATCCCTTTCAAAGGCCATCTTGTTACCTTTGACGAGAG 2951 Query 2751 GAGCTACATAGGCAATGCTCATCTATGTGGACTTCCTACAAATAAAAATTGCATCTCCCA 2810 ||| ||||||||||| |||||||| ||||||||||||||||||||||||||||||||||| Sbjct 2952 GAGTTACATAGGCAACGCTCATCTCTGTGGACTTCCTACAAATAAAAATTGCATCTCCCA 3011 Query 2811 GAGAGTCCCTGAGCCACCAAGTGTACCAACGCAGGCCAAAGAGGAAGACAACGAAGAAGA 2870 |||||||||||||||||||||||| ||||||| |||||||||||||| || |||||||| Sbjct 3012 GAGAGTCCCTGAGCCACCAAGTGTGTCAACGCATGCCAAAGAGGAAGAAAATGAAGAAGA 3071 Query 2871 AGGTGATGTGATAGACATGGTGTGGTTTTATTGGACTTGTGTTGCAGTCTACATAGCTAC 2930 |||| ||||||||||||||||||||||||| |||||||||| ||||||||||||| |||| Sbjct 3072 AGGTAATGTGATAGACATGGTGTGGTTTTACTGGACTTGTGCTGCAGTCTACATATCTAC 3131 Query 2931 ATCCTTGGCCTTGTTTGCTTTCCTCTGCATAGACACACGATGGTCCCGAGAATGGTTTTA 2990 ||||||||| |||||||||||||||| ||||||| ||||||||||||||||||||||||| Sbjct 3132 ATCCTTGGCATTGTTTGCTTTCCTCTACATAGACTCACGATGGTCCCGAGAATGGTTTTA 3191 Query 2991 TCGTGTAGATCTATGCGTTCATCATCTCCTACGGTTCAAGCGTTCCTCTA-TCTGCAACT 3049 ||||||||||||||||||||||||| | |||| ||||||||||||||| | ||||||||| Sbjct 3192 TCGTGTAGATCTATGCGTTCATCATATTCTACAGTTCAAGCGTTCCTC-AGTCTGCAACT 3250 Query 3050 GATTCCGTGGCTC-GCCAAG 3068 ||||| |||| | |||||| Sbjct 3251 GATTCTGTGGATTAGCCAAG 3270 Score = 1197 bits (648), Expect = 0.0 Identities = 783/848 (92%), Gaps = 10/848 (1%) Strand=Plus/Plus Query 4 GGTTTATTGCAACTCAAGTCGTATCTCAAGAATCTCCTTGACGCTgaagaagaagaagaa 63 ||||| ||||| |||||||||||||||||||||||| |||| || ||||||||||||||| Sbjct 4 GGTTTGTTGCAGCTCAAGTCGTATCTCAAGAATCTCGTTGATGCCGAAGAAGAAGAAGAA 63 Query 64 gaagGACTTAGTATTCTCAAGTCATGGACTCATCAT-AATGATGATTGTTGCC-TCTGGG 121 |||||||||||||||||||||||||||||||||||| || | ||||||||||| | |||| Sbjct 64 GAAGGACTTAGTATTCTCAAGTCATGGACTCATCATGAAGG-TGATTGTTGCCGT-TGGG 121 Query 122 AGAGAGTAAAGTGTAGTGACGCTACTAGTGGTCACGTCATCGATCTCTCACTGGATAGAC 181 ||||||||||||||||||| |||| || ||| |||||||||| ||||||||||||||||| Sbjct 122 AGAGAGTAAAGTGTAGTGATGCTATTAATGGCCACGTCATCGGTCTCTCACTGGATAGAC 181 Query 182 TCATACCGGTCGCATTTGAGTCGCAAATTCGGACTTTAAACCTGTCTTTGCTTCATAGTT 241 || |||||||||||||||||||||||| |||| ||||||| ||||||||||||||||||| Sbjct 182 TCGTACCGGTCGCATTTGAGTCGCAAACTCGGTCTTTAAATCTGTCTTTGCTTCATAGTT 241 Query 242 TTCCTCAACTCCAAAGCCTTAACCTCTCGTGGAATTGGTTTACTAATTTGTCTGATCACG 301 |||||||||||||||||||||| || |||||||||||||| |||||||||||||||||| Sbjct 242 TTCCTCAACTCCAAAGCCTTAATCTTTCGTGGAATTGGTTCACTAATTTGTCTGATCACT 301 Query 302 TCCTTGGTTATAAGAGCTTTGGGAGACTAGAGAAGCTCACCACCATAGATTTCTCCCACA 361 ||||||||| |||||||||||||| |||||| |||||||| ||| ||||||||||||| | Sbjct 302 TCCTTGGTTTTAAGAGCTTTGGGACACTAGATAAGCTCACTACCTTAGATTTCTCCCATA 361 Query 362 ATATGTTCGACAACAGTATTGTTCC-TTTCTTAAGTGCTGCGACATCGGTTAGGAATCTA 420 ||||||||||||||||||| || || ||| |||| ||||||||||||| |||||| |||| Sbjct 362 ATATGTTCGACAACAGTATCGTCCCGTTT-TTAAATGCTGCGACATCGATTAGGAGTCTA 420 Query 421 CATCTTGAGTCTAATTACATGGAAGGTGTCTTTCCTCCTCAAGAACTTGCAAACATGACA 480 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 421 CATCTTGAGTCTAATTACATGGAAGGTGTCTTTCCTCCTCAAGAACTTTCAAACATGACA 480 Query 481 AACTTGAGAGTGTTACACTTGAAGGACAACAGTTTCAGCTTCTTATCTGCTCAAGGTTTA 540 ||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||| Sbjct 481 AACTTGAGAGTGTTAAACTTGAAGGACAACAGTTTCAGCTTCTTATCTTCTCAAGGTTTA 540 Query 541 ACCTATTTCAGAGAGTTAGAAGTACTGGATCTCAGTTTCAATGGTGTCAACGTCTCTGAG 600 || |||||||||| || |||||||||||||||||||||||||||||||| | ||||||| Sbjct 541 ACAGATTTCAGAGATTTGGAAGTACTGGATCTCAGTTTCAATGGTGTCAATGACTCTGAG 600 Query 601 GCTAGTCACTGGTTTA-GTACGGCGAAACTGAAAACACTAGATCTTAGTTTCAATCCGTT 659 |||||||| | ||||| |||||||||||||||||||||||||||||| |||||||||||| Sbjct 601 GCTAGTCA-TAGTTTAAGTACGGCGAAACTGAAAACACTAGATCTTAATTTCAATCCGTT 659 Query 660 TTCAGATATTTCTCAACTTAAAGGTTTAGAAAGTCTCCGAGAGTTACTAGTCTTGATATT 719 |||||| ||||||||||||||||||||||||| |||| |||||||| |||||||| ||| Sbjct 660 GTCAGATTTTTCTCAACTTAAAGGTTTAGAAAGCCTCCAAGAGTTACAAGTCTTGAAATT 719 Query 720 ACGAGGCAATAAATTCAACCACACGCTATCTACTCATGCACTGAAAGATCTGAAAAAGTT 779 |||||| ||||||||||||||||||||||||||||||| |||||||||||| |||| ||| Sbjct 720 ACGAGGAAATAAATTCAACCACACGCTATCTACTCATGTACTGAAAGATCTTAAAATGTT 779 Query 780 GCAAGAACTGGATCTCAGTGACAATGGGTTCACAAATTTGGATCTTGGCCGAGAAGT-GA 838 ||||||||||||||||||||||||||||||||||||||| |||| ||||||||| || || Sbjct 780 GCAAGAACTGGATCTCAGTGACAATGGGTTCACAAATTTAGATCATGGCCGAGACGTTGA 839 Query 839 GGAGGAGT 846 ||| ||| Sbjct 840 TGAG-AGT 846 Score = 1024 bits (554), Expect = 0.0 Identities = 603/627 (96%), Gaps = 2/627 (0%) Strand=Plus/Plus Query 997 TATTTAGGGATTTGCAGACTAATGAAACTCAGGGAACTGGATTTGAGCAGCAATGCTTTA 1056 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct 1051 TATTTAGGGATTTGCAGACTAATGAAACTCAGGGAGCTGGATTTGAGCAGCAATGCTTTA 1110 Query 1057 ACAAGTCTACCTTCTTGTTTGGGTAACTTAACGCATCTTCGAACTCTTGATCTATCGAAC 1116 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1111 ACAAGTCTACCTTATTGTTTGGGTAACTTAACGCATCTTCGAACTCTTGATCTATCGAAC 1170 Query 1117 AACCAATTGAATGGAAACCTGTCTTCCTTTGTGTCTGGTCTACCAACAGTTCTTGAGTAC 1176 ||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||| Sbjct 1171 AACCAATTGAATGGAAACCTGTCTTCCTTTGTGTCTGGTCTACCATCAGTGCTTGAGTAC 1230 Query 1177 TTGTCGCTGCTTGATAATAACTTCAACGGTTCGTTCTTATTCAACTCACTGGTCAATCAA 1236 |||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||| Sbjct 1231 TTGTCGCTGCTTGATAATAACTTCGACGGTTCGTTCTTGTTCAACTCACTGGTCAATCAA 1290 Query 1237 ACAAGACTCACAGTATTCAAATTGTCATCAAAAGTTGGTGTGATCCAAGTTCAGACGGAG 1296 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 1291 ACAAGACTCACAGTATTCAAATTGTCATCAAAAGTTGGTGTGATCCAAGTTCAGACTGAG 1350 Query 1297 AGTTCCTGGGCTCCATTGTTTCAATTGAAGATGTTACATTTGTCGAATTGCAATCTTGGC 1356 ||||| |||||||||||||||||||||||||||||| |||| |||||||||| ||||||| Sbjct 1351 AGTTCATGGGCTCCATTGTTTCAATTGAAGATGTTATATTTATCGAATTGCAGTCTTGGC 1410 Query 1357 AGTACAATGC-CTGTCTTTCTCGTGCATCAGCATGACTTGTGCTTCGTTGATCTCTCTTA 1415 || ||||||| | | ||||||||||||||||| ||||||||||||||||||||||||| | Sbjct 1411 AGCACAATGCTCGG-CTTTCTCGTGCATCAGCGTGACTTGTGCTTCGTTGATCTCTCTCA 1469 Query 1416 TAACAAGTTGACAGGAACATTCCCAACGTGGCTTGTGAAGAATAACACAAGGCTGCAGAC 1475 |||||||||||||||||||||||| || |||||||||||||||||||||||||||||||| Sbjct 1470 TAACAAGTTGACAGGAACATTCCCGACTTGGCTTGTGAAGAATAACACAAGGCTGCAGAC 1529 Query 1476 TATTTTACTAAATGGGAACTCATTGACAAAGCTTCAACTACCTATGCTTGTTCACGGCTT 1535 ||||||||||| ||||||||||||||||||||||||||||||||| |||||||| ||||| Sbjct 1530 TATTTTACTAAGTGGGAACTCATTGACAAAGCTTCAACTACCTATTCTTGTTCATGGCTT 1589 Query 1536 GCAAGTTCTCGATATCTCGAGTAATATGATATATGATTCGATTCAAGAAGACATAGGGAT 1595 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 1590 GCAAGTTCTCGATATCTCGAGTAATATGATATATGATTCGATTCAAGAGGACATAGGGAT 1649 Query 1596 GGTGTTTCCAAACCTGAGGGTTATGAA 1622 ||||||||||||||||||| ||||||| Sbjct 1650 GGTGTTTCCAAACCTGAGGTTTATGAA 1676 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 152658007549 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5