BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg470766
Length=926
Score E
Sequences producing significant alignments: (Bits) Value
AT1G07440.1 | Symbols: | NAD(P)-binding Rossmann-fold superfam... 1371 0.0
> AT1G07440.1 | Symbols: | NAD(P)-binding Rossmann-fold superfamily
protein | chr1:2286297-2287730 REVERSE LENGTH=1005
Length=1005
Score = 1371 bits (742), Expect = 0.0
Identities = 839/886 (95%), Gaps = 5/886 (1%)
Strand=Plus/Plus
Query 44 GAGAGCAATGGCTGGAGCAGAGCAAAGCCAAAGATGGAGCCTTAAGGACAAGACCGCACT 103
||||| |||||||||||||||||||||||| |||||||||||||||| |||||||| |||
Sbjct 59 GAGAGAAATGGCTGGAGCAGAGCAAAGCCAGAGATGGAGCCTTAAGGCCAAGACCGTACT 118
Query 104 TGTAACCGGTGGAACCAAAGGCATCGGGCATGCTATAGTAGAGGAATTTGCAGGATTTGG 163
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 119 TGTAACCGGTGGAACAAAAGGCATCGGGCATGCTATAGTAGAGGAATTTGCAGGATTTGG 178
Query 164 TGCAGTAATACATACTTGTGCCAGAGACGAATCTCAGCTTAACGAGTGTTTAAGCAAATG 223
|||||||||||||||||||| ||| |||||| | |||||||||||||||||||||||||
Sbjct 179 AGCAGTAATACATACTTGTGCTAGAAACGAATATGAGCTTAACGAGTGTTTAAGCAAATG 238
Query 224 GCAAAAGAAGGGTTTTCAAGTCACTGGTTCGGTCTGTGACGCATCTTCT-AGACCAGACA 282
||||||||||||||||||||||||||||||||||||||||||||||| | |||||||| |
Sbjct 239 GCAAAAGAAGGGTTTTCAAGTCACTGGTTCGGTCTGTGACGCATCTT-TGAGACCAGAGA 297
Query 283 GAGAGAAGCTAATGCAGACTGTGTCTTCAATGTTTGGTGGCAAGCTCGATATCCTCATAA 342
|||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 298 GAGAAAAGCTAATGCAGACTGTGTCTTCAATGTTTGGTGGAAAGCTCGATATCCTCATAA 357
Query 343 ACAATGTGGGAGCGATTCGGTCAAAGCCAACGCTGGATTATACAGCAGAGGATTTCTCGT 402
||||| ||||||||||||||||||| |||||||||||||| |||||||| ||||||||||
Sbjct 358 ACAATTTGGGAGCGATTCGGTCAAAACCAACGCTGGATTACACAGCAGAAGATTTCTCGT 417
Query 403 TTCATATTTCGACAAACTTAGAATCTGCTT-TCCATCTGAGCCAGCTTGCACATCCTCTG 461
|||||||||||||||||||||||||||||| || |||||||||||||||| |||||||||
Sbjct 418 TTCATATTTCGACAAACTTAGAATCTGCTTATC-ATCTGAGCCAGCTTGCGCATCCTCTG 476
Query 462 CTTAAGGCTTCAGGATGTGGGAACATCGTTTTCATGTCCTCTATTGCTGGAGTTGTATCG 521
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 477 CTTAAGGCTTCAGGATGTGGGAACATAATTTTCATGTCCTCTATTGCTGGAGTTGTATCT 536
Query 522 GCTAGTGTCGGCTCCGTCTACTCAGCAACAAAAGGGGCAATGAATCAGCTAGCAAGGAAT 581
||||||||||||||| ||||||| ||||| ||||||||| |||||||||||||||||||
Sbjct 537 GCTAGTGTCGGCTCCATCTACTCTGCAACGAAAGGGGCATTGAATCAGCTAGCAAGGAAC 596
Query 582 TTGGCATGTGAGTGGGCTAGCGATGGCATTAGGGCTAATGCTGTTGCTCCTGCAGTCATT 641
|||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||
Sbjct 597 TTGGCATGTGAGTGGGCTAGTGATGGCATTAGGGCTAATGCTGTGGCTCCTGCAGTCATC 656
Query 642 GCAACTCCTTTGGCTGAAGCTGTGTATGATGATGAGTTCAAGAAAGTGGTGATATCAAGA 701
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 657 GCAACTCCTTTGGCTGAAGCTGTGTATGATGATGAGTTCAAGAAAGTGGTGATATCAAGA 716
Query 702 AAGCCGCTGGGGCGTTTCGGGGAGCCTGAAGAAGTGGCCTCGCTTGTGGCTTTTCTATGT 761
|||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 717 AAGCCGTTGGGGCGTTTCGGGGAGCCTGAAGAAGTGTCCTCGCTTGTGGCTTTTCTATGT 776
Query 762 ATGCCTGCAGCGTCTTATGTAACTGGTCAGACCATTTGCGTCGATGGAGGTCTCTCTGTC 821
||||||||||| |||||| |||||||||| |||||||| ||||||||||||||| |||||
Sbjct 777 ATGCCTGCAGCTTCTTATATAACTGGTCAAACCATTTGTGTCGATGGAGGTCTCACTGTC 836
Query 822 AATGGCTTCTCCTATCAGCCACAAGATTAAAA-CCAATATCCAAAAACAAACAAAGTTTC 880
||||||||||||||||||||||||| |||||| |||||||||||||||||||| | ||||
Sbjct 837 AATGGCTTCTCCTATCAGCCACAAGGTTAAAATCCAATATCCAAAAACAAACACATTTTC 896
Query 881 ATCTTCATTACTTAGAACATTGTCATCTTGGGCTAAGTCCGGTTTG 926
| ||||||||||| ||||||||||||||||||||||| ||||||||
Sbjct 897 AACTTCATTACTTTGAACATTGTCATCTTGGGCTAAGCCCGGTTTG 942
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 45260966447
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5