BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg470767
Length=900
Score E
Sequences producing significant alignments: (Bits) Value
AT1G07450.1 | Symbols: | NAD(P)-binding Rossmann-fold superfam... 1219 0.0
AT2G29300.2 | Symbols: | NAD(P)-binding Rossmann-fold superfam... 200 2e-50
> AT1G07450.1 | Symbols: | NAD(P)-binding Rossmann-fold superfamily
protein | chr1:2287926-2289336 REVERSE LENGTH=975
Length=975
Score = 1219 bits (660), Expect = 0.0
Identities = 849/934 (91%), Gaps = 38/934 (4%)
Strand=Plus/Plus
Query 1 CCAACCATTAAGCTTATCATTCTAACTGATTATATTTGTGGCTATAGTGACTAA--AT-G 57
|||||||||||||||||||||||||||||||||| ||||||||||||||||||| | |
Sbjct 2 CCAACCATTAAGCTTATCATTCTAACTGATTATACTTGTGGCTATAGTGACTAAGTGTCG 61
Query 58 TCACACACACAAGTCACAACGATGGATATTAACAGGTGGAGTCTTCAAGGAATGACTGCT 117
|||||||||||| |||||| ||||||||||||||||||||||||||||| |||||||||
Sbjct 62 TCACACACACAA--CACAACAATGGATATTAACAGGTGGAGTCTTCAAGGTATGACTGCT 119
Query 118 CTTGTAACCGGTGGAGCAAAGGGAATTGGGTATGCGGTAGTGGAGGAACTTGTAGGCTTT 177
||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||
Sbjct 120 CTTGTAACCGGTGGATCAAAGGGAATTGGGTATGCAATAGTGGAGGAACTTGTAGGCTTT 179
Query 178 GGTGCAAGAGTTCACATCTGTGACAGAGACCAAACTCTGCTAAACGAATGCTTAAGTGAA 237
||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||| |
Sbjct 180 GGTGCAAGAGTTCACATCTGTGACATAGACGAAACTCTGCTAAACGAATGCTTAAGTGGA 239
Query 238 TGGCAAGCAAAAGGGTTTGAAGTCAGTGGTTCGGTCTGTGATGTTTCCTCTCGACCTCAG 297
||||| ||||||||||||||||| |||||||| ||||||||||||||||||||||||||
Sbjct 240 TGGCATGCAAAAGGGTTTGAAGTGAGTGGTTCAATCTGTGATGTTTCCTCTCGACCTCAG 299
Query 298 AGAGAGCAATTGATACAGACTGTTTCTTCTCTATTCGGTGCCAAACTCAACATTCTTATA 357
|||| ||||||||| |||||||||||||||||||| ||||||||||||||||| ||||||
Sbjct 300 AGAGTGCAATTGATGCAGACTGTTTCTTCTCTATTTGGTGCCAAACTCAACATCCTTATA 359
Query 358 AACAATGTTGGCAAGTATATATTAAAGCCAACTTTAGAAAGTACAGTTGAAGATTTCTCA 417
||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||
Sbjct 360 AACAATGTTGGCAAGTACATATTAAAGCCAACTTTAGAAAGTACAGCTGAAGATTTCTCA 419
Query 418 AGTTTAATGGCTACCAATTTGGAATCTGCTTACCATATCTCCCAATTGGCACATCCGTTA 477
||||||||||||||||||||||||||||||||| | |||||||||||||||||||| |||
Sbjct 420 AGTTTAATGGCTACCAATTTGGAATCTGCTTACTACATCTCCCAATTGGCACATCCTTTA 479
Query 478 CTTAAAGCCTCGGGATATGGGAATATCGTGTTTATTTCCTCGGTATCGGGGGTTGTCTCT 537
||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 480 CTTAAAGCCTCGGGAAATGGGAATATCGTGTTTATTTCCTCGGTAACGGGGGTTGTCTCT 539
Query 538 GGCATATCCT-CCATATATGGTGCAACAAAAGGAGCCTTAAATCAACTGGCAAAAAACTT 596
|||| ||| | |||||||||||| ||||||||||||||| ||||||||||||| | | ||
Sbjct 540 GGCACATC-TACCATATATGGTGTAACAAAAGGAGCCTTGAATCAACTGGCAAGAGATTT 598
Query 597 GGCGTGTGAATGGGCTAGTGACAACATAAGGGCTAACTCTGTAGCTCCTTGG-T-A-T-C 652
||||||||||||||| |||||||||||||||||||||||||||||||||||| | | | |
Sbjct 599 GGCGTGTGAATGGGCCAGTGACAACATAAGGGCTAACTCTGTAGCTCCTTGGGTCACTGC 658
Query 653 ---TT-----G---AAGA----C--GA-GA--A-AT-TT-GCGGAAGCTATACTT-TCAA 688
|| | || | | || || | || || ||||||||||| || ||||
Sbjct 659 AACTTCTCTTGTCCAAAAATATCTTGAAGACGAGATATTTGCGGAAGCTATG-TTCTCAA 717
Query 689 GAACCCCATTAGGACGTGTATGTGAGCCACGTGAGGTTGCGTCGTTGGTGACATTTCTTT 748
|||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||| |
Sbjct 718 GAACCCCATTAGGACGTGCATGTGAGCCACGTGAGGTTGCGTCGCTGGTGACATTTCTCT 777
Query 749 GTCTCCCTGCGGCTTCTTATATAACAGGACAAACCATTTGTATCGATGGAGGTTTCACTG 808
|||||||||| |||||||||||||||||||||||||||||||| ||||| ||||||||||
Sbjct 778 GTCTCCCTGCAGCTTCTTATATAACAGGACAAACCATTTGTATTGATGGTGGTTTCACTG 837
Query 809 TTAATGGCTTCTCCTATAAGCCATAGGCTCAAACCCTAGAAA-CACTTGTATAATTAACT 867
||||||| ||||||||||||||||||| |||||||||||||| ||||| || |||||||
Sbjct 838 TTAATGGATTCTCCTATAAGCCATAGGGTCAAACCCTAGAAAACACTTCTACAATTAACA 897
Query 868 CTT-CTATGATGTATGAACATTTAGTCAAGTTTT 900
|| ||||||||||||||||||| ||||||||||
Sbjct 898 ATTTCTATGATGTATGAACATTTGGTCAAGTTTT 931
> AT2G29300.2 | Symbols: | NAD(P)-binding Rossmann-fold superfamily
protein | chr2:12588191-12589759 FORWARD LENGTH=1000
Length=1000
Score = 200 bits (108), Expect = 2e-50
Identities = 420/562 (75%), Gaps = 55/562 (10%)
Strand=Plus/Plus
Query 79 ATGGATATTAACAGGTGGAGTCTTCAAGGAATGACTGCTCTTGTAACCGGTGGAGCAAAG 138
||||||| || || |||||||| |||||||||||||||||||||||||||| ||| | |
Sbjct 24 ATGGATA--AA-AGATGGAGTCTACAAGGAATGACTGCTCTTGTAACCGGTGCAGCCA-G 79
Query 139 -GGAATTGGGTATGCGGTAGTGGAGGAACTT-G-TAGGCTTTGGTGCAAGAGTTCACATC 195
|| || || ||||| |||| ||||| || | | || ||||| || ||| | || |
Sbjct 80 CGGTATCGGTTATGCCATAGTAGAGGAG-TTAGCT-GGTTTTGGAGCTAGAATCCATGTA 137
Query 196 TGTGACAGAGACC-AAACTCTGCTAAA-CGAATGCTTAAGTGAATGGCAAGCA-AAAGGG 252
|| |||| | || |||||||||| || | || ||||||| |||||| || | ||||||
Sbjct 138 TGCGACATAT-CCGAAACTCTGCTTAATCAAA-GCTTAAGAGAATGGGAAA-AGAAAGGG 194
Query 253 TTTGAAGTCAGTGGTTCGGTCTGTGATGTTTCCTCTCGACCTC-AGAGAGAGCAATTGAT 311
||| |||| |||||||| ||||||||||| ||||||| || | ||||||| || ||||
Sbjct 195 TTTCAAGTGAGTGGTTCAGTCTGTGATGTAACCTCTCGTCC-CGAGAGAGAAAAACTGAT 253
Query 312 ACAGACTGTTTCTTCTCTATTCGGTGCCAAACTCAACATTCTTATAAACAATGTTGGCAA 371
|| || || ||||| || |||| || |||||| ||||||||| |||||||||| |||
Sbjct 254 GCAAACCGTCTCTTCGCTTTTCGATGGCAAACTAAACATTCTTGTAAACAATGTGGGC-- 311
Query 372 GTA-TATATT--AAAGCCAACTTTAGAAAGTACAGTTG-A-A-GATTTCTCAAGTTTAAT 425
||| | | ||||||||| |||| || || | | | |||||| | ||| ||
Sbjct 312 GTACT-TCGCGCAAAGCCAACAACAGAA--TAT-GTGGCAGACGATTTCACT--TTTCAT 365
Query 426 GGCT-ACCAAT-TTGGAATCTGCTTACCATATCTCCCAA-TTGGCACATCCGT-TACTTA 481
|| | ||| |||||| ||||||||||| | | |||| || ||||||| | | ||||
Sbjct 366 ATCTCAACAAACTTGGAAGCTGCTTACCATTTTTGCCAACTTT-CACATCC-TCT-CTTA 422
Query 482 AAGCCT-CGGGATATGGGAAT-ATCGTGTTTATTTCCTCGGTATCGGGGGTTGT--C--T 535
||| || | || ||||| || |||||||| ||||||| || || |||||||| | |
Sbjct 423 AAGACTTCAGGCTATGG-AAGCATCGTGTTCCTTTCCTCTGTTTCTGGGGTTGTGTCAAT 481
Query 536 --CTGGCATATCC-TC-CATATATGGTGC-AACAAAAGGAGC-CTTAAATCAACTGGCAA 589
||| | | | || | | |||||| | |||||||||||| || |||||| || || |
Sbjct 482 AACTGAC-TGTGGATCACTT-TATGGT-CTAACAAAAGGAGCTCT-AAATCAGCTAGCTA 537
Query 590 AAAACTTGGCGTGTGAATGGGC 611
||| ||||| |||||||||||
Sbjct 538 GAAATTTGGCATGTGAATGGGC 559
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 43954878625
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5