BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg470852 Length=1251 Score E Sequences producing significant alignments: (Bits) Value AT1G08010.1 | Symbols: GATA11 | GATA transcription factor 11 | ... 1476 0.0 AT1G08000.1 | Symbols: GATA10 | GATA transcription factor 10 | ... 1158 0.0 > AT1G08010.1 | Symbols: GATA11 | GATA transcription factor 11 | chr1:2485906-2488027 REVERSE LENGTH=1391 Length=1391 Score = 1476 bits (799), Expect = 0.0 Identities = 1083/1211 (89%), Gaps = 55/1211 (5%) Strand=Plus/Plus Query 18 ACCAACTCCGA-TTCGTCATCGTACGAC-TCTTtctctctctctct-ctc-tctGTGTAT 73 |||| |||| | |||||||||||||||| || ||||||||||||| ||| ||| ||||| Sbjct 93 ACCATCTCC-AGTTCGTCATCGTACGACGACTCTCTCTCTCTCTCTCCTCTTCTCTGTAT 151 Query 74 A-TCACAAGGT-TCGTGC-A-TCTATATAGTATAGCATGAATAGGTTACCTGAAGCTGAA 129 | || || | | | | | | || |||| ||||||||||| ||||||||||||||||| Sbjct 152 AGTC-GAA-TTATATTACAAGT-TAGATAG-ATAGCATGAATTGGTTACCTGAAGCTGAA 207 Query 130 GCTGAGGA-GCACTTCAAAGGCCTTCTCTCTGGTGATTTCTTTGATGATCTCATCAATCA 188 |||||||| | |||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 208 GCTGAGGATG-ACTTCAAAGGTCTTCTCTCTGGTGATTTCTTTGATGATCTCATCAATCA 266 Query 189 CCTTGACTG-CCCTCTTGAAGACATCGATTCCACCAATGTTGAGGGTGATTGGGTTGCCA 247 ||||||| | ||||||||| ||||| ||| ||||||||| ||| || |||||||||| || Sbjct 267 CCTTGAC-GTCCCTCTTGATGACATTGATACCACCAATGGTGAAGGAGATTGGGTTGACA 325 Query 248 GGTTTCAAGACCTTGAGCCTCCCCCCATGGATATGTTTCCGAGTTTGCCTTCTGACCTCA 307 |||||||||||||||||||||| |||||||||||||| || | ||||||||||||||||| Sbjct 326 GGTTTCAAGACCTTGAGCCTCCTCCCATGGATATGTTCCCCACTTTGCCTTCTGACCTCA 385 Query 308 TCTCTTG-TGC-C--AC-TGG---AGG----TCGTCTGGGGATTCAAAGGAACATGATTC 355 |||||| || | | ||| ||| |||| ||| |||||||||||| |||| Sbjct 386 CCTCTTGCGGCTCTGGCATGGCCAAGGCCCCTCGTGTGGATATTCAAAGGAAC---ATTC 442 Query 356 CTGCTTTCAAACAGTCCTGTTCTTCTGAAGCCTTGTCCGGCATTAATACCACTCTCCACC 415 ||||||| |||||||||| ||||||||||||||||| | | | ||||||||||| Sbjct 443 CTGCTTTGAAACAGTCCTATTCTTCTGAAGCCTTGT-C--C------AGCACTCTCCACC 493 Query 416 AATCTTCAGCTCCTCCTGATATCAAAGTTTCCAAGCTATTTCAGTCTTTAAGTCCAGTGT 475 ||||||||||||||||||| ||||||||||| || ||||||||||||||||||||||||| Sbjct 494 AATCTTCAGCTCCTCCTGAAATCAAAGTTTCGAAACTATTTCAGTCTTTAAGTCCAGTGT 553 Query 476 CAGTTCTCGAGAACAGTTATGGTTCTCTCTCCACCCAGAACTCCGGATCTCAGAGATTGG 535 ||||||||||||||||||||||||||||||| ||||| ||| |||||||||||||||| Sbjct 554 CAGTTCTCGAGAACAGTTATGGTTCTCTCTCGACCCACAACAATGGATCTCAGAGATTGG 613 Query 536 CTTTCCCTGTGAAAGGCATGAGAAGCAAGCGCAAACGCCCCACAACACTGAGACTTAGCT 595 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 614 CTTTCCCTGTGAAAGGCATGAGAAGCAAGCGCAAACGCCCCACAACACTGAGACTTAGCT 673 Query 596 ACCTTTTCCCCTCTGAACCCAGAAAGCCCGAGAAGTCAACTCCTGGCGAATCAGAATCCG 655 |||||||||||||||||||| ||||||||||||||||||| || ||| || | ||||||| Sbjct 674 ACCTTTTCCCCTCTGAACCCCGAAAGCCCGAGAAGTCAACCCCGGGCAAACCTGAATCCG 733 Query 656 AGAGTTACTATTCTTCTGAGCAACATGCCAAGAAGAAACGCAAGATCCACCTGACCACCC 715 || |||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 734 AGTGTTACTTTTCTTCTGAGCAACATGCCAAGAAGAAACGCAAGATCCACCTGACCACCC 793 Query 716 GCACGGTGTCTTCCAGTTCTG-AGGCAAGCAACTCGGATGGGATAGTCCGGAAATGCACT 774 ||||||| ||||||| | ||| |||||||||||||||||||||||||||| ||||||||| Sbjct 794 GCACGGTCTCTTCCACT-CTGGAGGCAAGCAACTCGGATGGGATAGTCCGCAAATGCACT 852 Query 775 CATTGTGAGACAACCAAGACCCCGCAGTGGAGGGAAGGACCCAAAGGAC-GAAAGACCCT 833 ||||| ||||||||||||||||| ||||||||||||||||||| |||| ||| |||||| Sbjct 853 CATTGCGAGACAACCAAGACCCCACAGTGGAGGGAAGGACCCAGTGGACCGAA-GACCCT 911 Query 834 CTGCAACGCTTGCGGGGTGCGGTTCAGATCTGGTCGTCTAGTTCCAGAATACCGACCAGC 893 |||||| |||||||| ||| |||||||||||||||| ||||||||||||||||||||||| Sbjct 912 CTGCAATGCTTGCGGAGTGAGGTTCAGATCTGGTCGCCTAGTTCCAGAATACCGACCAGC 971 Query 894 CTCAAGCCCGACCTTCATCCCATCAGTGCATTCAAACTCACACAGGAAGATCGTTGAAAT 953 ||||||||| |||||||||||| | ||||||||||||||||||||||||||| |||| || Sbjct 972 CTCAAGCCCCACCTTCATCCCAGCTGTGCATTCAAACTCACACAGGAAGATCATTGAGAT 1031 Query 954 GAGAAGGAAGGACGACGAACAGTTTGATACCAGCATGATTCGGGCAGTGATATCCAGAGG 1013 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 1032 GAGAAGGAAGGACGACGAACAGTTTGATAGCAGCATGATTCGGGCAGTGATATCCAGAGG 1091 Query 1014 GTAAAGCAGTTTT------AA-GTTTGGTCTCTGATCCGCAGAAATGGGAACTCAGTGAA 1066 ||||||||||||| || ||||||||||||||||||||||||||||| |||||| | Sbjct 1092 GTAAAGCAGTTTTTTTTTTAAAGTTTGGTCTCTGATCCGCAGAAATGGGAAGTCAGTGGA 1151 Query 1067 GGAAGAAGATGGTATAAAAGTAGGGGTTAGTGACTGTTTTCAAATCTGATGAAGAGAGTT 1126 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 1152 GGAAGAAGATGGTATAAAAGTAGGGTTTAGTGACTGTTTTCAAATCTGATGAAGAGAGTT 1211 Query 1127 TAGGGGTTTAGTTGAAGTTAGGTATATTAAATATT--GTTGTTTGATTATGTGTTTTTAT 1184 ||| ||||||||| |||||||| |||| ||||||| ||||||| ||||||||||||||| Sbjct 1212 TAGTGGTTTAGTTCAAGTTAGGGATATGAAATATTTTGTTGTTTCATTATGTGTTTTTAT 1271 Query 1185 CTTATATCTCT 1195 ||| ||||||| Sbjct 1272 CTT-TATCTCT 1281 > AT1G08000.1 | Symbols: GATA10 | GATA transcription factor 10 | chr1:2483240-2485109 REVERSE LENGTH=1373 Length=1373 Score = 1158 bits (627), Expect = 0.0 Identities = 833/929 (90%), Gaps = 28/929 (3%) Strand=Plus/Plus Query 102 TAGCATGAATAGGTTACCTGAAGCTGAAGCTGAGGAGCACTTCAAAGGCCTTCTCTCTGG 161 ||| |||||| ||||||||||||||||||||||||||||||| ||||| |||||||||| Sbjct 224 TAG-ATGAATTGGTTACCTGAAGCTGAAGCTGAGGAGCACTTGAAAGGTATTCTCTCTGG 282 Query 162 TGATTTCTTTGATGATCTCATCAATCACCTTGACTGCCCTCTTGAAGACATCGATTCCAC 221 |||||||||||||| ||||| |||||||||||| ||||| |||||||||||||||||||| Sbjct 283 TGATTTCTTTGATGGTCTCACCAATCACCTTGATTGCCCACTTGAAGACATCGATTCCAC 342 Query 222 CAATGTTGAGGGTGATTGGGTTGCCAGGTTTCAAGACCTTGAGCCTCCCCCCATGGATAT 281 ||||| |||||| |||||||| |||||||||||||||||||||||||| ||| ||||||| Sbjct 343 CAATGGTGAGGGAGATTGGGTCGCCAGGTTTCAAGACCTTGAGCCTCCTCCCTTGGATAT 402 Query 282 GTTTCCGAG-TTTGCCTTCTGACCTCATCTCTTGTGCCACTGGAG--G-TCGTCTGGGGA 337 | |||| | ||||||||||||||||| ||||||| ||| || | | |||| || ||| Sbjct 403 G-TTCCCTGCTTTGCCTTCTGACCTCACCTCTTGTCCCAAGGGCGCCGCTCGTGTGCGGA 461 Query 338 TT-CAAAGGAACATGATTCCTGCTTTCAAACAGTCCTGTTCTTCTGAAGCCTTGTCCGGC 396 || | || ||||||||||||||||| || |||||||||||||||||||||||||||||| Sbjct 462 TTCCCAA-CAACATGATTCCTGCTTTGAAGCAGTCCTGTTCTTCTGAAGCCTTGTCCGGC 520 Query 397 ATTAATACCACTCTCCACCAATCTTCAGCTCCTCCTGATATCAAAGTTTCCA-AGCTATT 455 ||||||| ||||| ||||||||||||||||||||||||||||||||||| || | ||||| Sbjct 521 ATTAATAGCACTCCCCACCAATCTTCAGCTCCTCCTGATATCAAAGTTT-CATATCTATT 579 Query 456 TCAGTCTTTAAGTCCAGTGTCAGTTCTCGAGAACAGTTATGGTTCTCTCTCCACCCAGAA 515 ||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 580 TCAGTCTCTAACTCCAGTGTCAGTTCTCGAGAACAGTTATGGTTCTCTCTCCACCCAAAA 639 Query 516 CTCCGGATCTCAGAGATTGGCTTTCCCTGTGAAAGGCATGAGAAGCAAGCGCAAACGCCC 575 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 640 CTCCGGATCTCAGAGATTGGCTTTCCCTGTGAAAGGCATGAGAAGCAAGCGCAGACGCCC 699 Query 576 CACAACACTGAGACTTAGCTACCTTTTCCCCTCTGAACCCAGAAAGCCCGAGAAGTCAAC 635 ||||||| |||||||||||||||||||||||| ||||||||||||| ||||| Sbjct 700 CACAACAGTGAGACTTAGCTACCTTTTCCCCTTTGAACCCAGAAAG---------TCAAC 750 Query 636 TCCTGGCGAATCAG-AATCCGAGAGTTACTATTCTTCTGAGCAACATGCCAAGAAGAAAC 694 ||| || ||||||| || ||||| |||||||||||||||||||||||||||||||||| | Sbjct 751 TCCGGGTGAATCAGTAA-CCGAGGGTTACTATTCTTCTGAGCAACATGCCAAGAAGAAGC 809 Query 695 GCAAGATCCACCTGACCACCCGCACGGTGTCTTCCAGTTCTG-AGGCAAGCAACTCGGAT 753 ||||||| || |||| ||||| ||| | |||||||| || || || |||| || |||||| Sbjct 810 GCAAGATTCATCTGATCACCCACACCGAGTCTTCCACTT-TGGAGTCAAGTAAGTCGGAT 868 Query 754 GGGATAGTCCGGAAATGCACTCATTGTGAGACAACCAAGACCCCGCAGTGGAGGGAAGGA 813 ||||||||||||| |||||||||||||||||||| || |||||| ||||||||| ||||| Sbjct 869 GGGATAGTCCGGATATGCACTCATTGTGAGACAATCACGACCCCACAGTGGAGGCAAGGA 928 Query 814 CCCAAAGGACGAAAGACCCTCTGCAACGCTTGCGGGGTGCGGTTCAGATCTGGTCGTCTA 873 |||| |||| ||||||||||||||||||||||| || ||||||| ||||||||| ||| Sbjct 929 CCCAGTGGACCCAAGACCCTCTGCAACGCTTGCGGAGTCCGGTTCAAATCTGGTCGCCTA 988 Query 874 GTTCCAGAATACCGACCAGCCTCAAGCCCGACCTTCATCCCATCAGTGCATTCAAACTCA 933 |||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||| Sbjct 989 GTTCCAGAATACCGGCCAGCCTCAAGCCCGACCTTCATCCCATCTGTGCATTCAAACTCA 1048 Query 934 CACAGGAAGATCGTTGAAATGAGAAGGAAGGACGACGAACAGTTTGATACCAGCATGATT 993 |||||||||||| |||| ||||||| |||||||||||| ||||||||||||||||||| Sbjct 1049 CACAGGAAGATCATTGAGATGAGAAAGAAGGACGACGA---GTTTGATACCAGCATGATT 1105 Query 994 CGGGCAGTGATATCCAGAGGGTAAAGCAG 1022 || |||||||||||||| |||||||||| Sbjct 1106 CG--CAGTGATATCCAGAAGGTAAAGCAG 1132 Score = 187 bits (101), Expect = 2e-46 Identities = 128/140 (91%), Gaps = 5/140 (4%) Strand=Plus/Plus Query 1066 AGGAAGAAGATGGTATAAAAGTAGGGGTTAGTGACTGTTTTCAAATCTGATGAAGAGAGT 1125 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1136 AGGAAGAAAATGGTATAAAAGTAGGGGTTAGTGACTGTTTTCAAATCTGATGAAGAGAGT 1195 Query 1126 TTAGGGGTTTAGTTGAAGTTAGGTATATTAA-ATATT-GTTGTTTGATTATGTGTTTTTA 1183 ||||||||||||| |||||||| |||| || ||||| ||||||| |||||||| ||| | Sbjct 1196 TTAGGGGTTTAGTC-AAGTTAGGGATAT-AACATATTTGTTGTTTCATTATGTGATTT-A 1252 Query 1184 TCTTATATCTCTCTCttttt 1203 |||||| |||||||| |||| Sbjct 1253 TCTTATCTCTCTCTCATTTT 1272 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 61495667625 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5