BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg470861
Length=6510
Score E
Sequences producing significant alignments: (Bits) Value
AT1G08060.1 | Symbols: MOM, MOM1 | ATP-dependent helicase famil... 7563 0.0
> AT1G08060.1 | Symbols: MOM, MOM1 | ATP-dependent helicase family
protein | chr1:2501742-2511084 REVERSE LENGTH=6554
Length=6554
Score = 7563 bits (4095), Expect = 0.0
Identities = 4931/5315 (93%), Gaps = 135/5315 (3%)
Strand=Plus/Plus
Query 1101 TTGGTGAAACTAGTTTAG-AGAAGAAATATCCACAAAAGTTTCAAGATGGTAACACAGAT 1159
|||||||||||||||||| | ||| |||||||||||||||||||||||| ||||||||||
Sbjct 1103 TTGGTGAAACTAGTTTAGAAAAAG-AATATCCACAAAAGTTTCAAGATGATAACACAGAT 1161
Query 1160 TGTCTACCACCTGCAAATGCAGAATCAAAGAA-GCTGCCAGTTGGCCAAACTAGTTTAGA 1218
||||||||||||||||||||||||||||| || ||||||||||||| |||||||||||||
Sbjct 1162 TGTCTACCACCTGCAAATGCAGAATCAAA-AAGGCTGCCAGTTGGCGAAACTAGTTTAGA 1220
Query 1219 CAAGGACACTGATTTTCCTTTGAAATCAA-TAACGGAGACCGAAAAGATGGTTCTTTATG 1277
|||||||||||||||||||||||||||| | |||||||| | |||||||||||||||||
Sbjct 1221 AAAGGACACTGATTTTCCTTTGAAATCAACT-ACGGAGACTGGAAAGATGGTTCTTTATG 1279
Query 1278 CATCCCCCATAGTCGAAACTAGGGATGACAGCGTTATA-GCTTCACCATCTGA-AAATTT 1335
||||||||||||| |||||||||||||||||||||||| | |||||||||| | ||||||
Sbjct 1280 CATCCCCCATAGTTGAAACTAGGGATGACAGCGTTATATG-TTCACCATCT-ACAAATTT 1337
Query 1336 AGAAACCCAAAAGCCTT-TTGTCAGTAAAACTGGTTTAGAAACCGACATAGGTTTGCCTT 1394
||||||||||||| ||| |||||||||||||||| |||||||||||||||| ||||||||
Sbjct 1338 AGAAACCCAAAAG-CTTCTTGTCAGTAAAACTGGCTTAGAAACCGACATAGTTTTGCCTT 1396
Query 1395 TGAAAAGAAAAAGAGACACTGCAGGAATTGAGCTGGATGCATGTGCCACAGTTGCAAATG 1454
|||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||
Sbjct 1397 TGAAAAGAAAAAGAGACACTGCAGAAATTGAGCTGGATGCATGTGCTACAGTTGCAAATG 1456
Query 1455 GAGATGACCATGTTATGAGTTCTGATGGGGTCAATCCATCTCCATTTGGGTGCAAAAATG 1514
||||||| || |||||||||||||||||||||| ||||||||||| ||||||||||||||
Sbjct 1457 GAGATGATCACGTTATGAGTTCTGATGGGGTCATTCCATCTCCATCTGGGTGCAAAAATG 1516
Query 1515 ATAATCAACCTGAAATGTGCAACACATGTAAAAAACGGCAAAAGGTCAATGGTGATTTTC 1574
|||||| |||||||||||||||||| ||||||||||||||||||||||| ||||||| ||
Sbjct 1517 ATAATCGACCTGAAATGTGCAACACGTGTAAAAAACGGCAAAAGGTCAACGGTGATTGTC 1576
Query 1575 AAAATCTGAGTGTTTGCTCCTGCATTGCCCAGCCAGTTGAAGAATCTGATCACTTGACAC 1634
||||| |||||||||||||||||||| |||||||||||||||||||||| || ||||||
Sbjct 1577 AAAATAGGAGTGTTTGCTCCTGCATTGTCCAGCCAGTTGAAGAATCTGATAACGTGACAC 1636
Query 1635 AGGATATGAAGGAAACTGGACCAGCTACGAGCAGGGAATATGAGGAGAACGGGCAAATGC 1694
|||||||||| ||||||||||||| ||||||||| ||||||||||||||||||||||| |
Sbjct 1637 AGGATATGAAAGAAACTGGACCAGTTACGAGCAGAGAATATGAGGAGAACGGGCAAATAC 1696
Query 1695 AACACGGTAAATCAAGTGAACCCAAATTGTATTCTTCGATGTACCCAGAGTATTGGGTTC 1754
|||| |||||||||||||| |||||||| ||||||||| |||||||||||||||||||||
Sbjct 1697 AACATGGTAAATCAAGTGATCCCAAATTCTATTCTTCGGTGTACCCAGAGTATTGGGTTC 1756
Query 1755 CTGTGCAGCTATCAGACGTACAGCTGGAGCAATACTGTCGGACTCTCTTCTCCAAATCCT 1814
|||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||
Sbjct 1757 CTGTGCAGCTATCAGATGTACAGCTGGAGCAATACTGTCAGACTCTCTTCTCCAAATCCT 1816
Query 1815 TATCTCTTTCTTCACTGTCGAAGATTGATCTTGGAACTCTCGAAGAAACTCTCAATTCTG 1874
|||||||||||||||| |||||||||||||||||| |||| |||||||||||||||||||
Sbjct 1817 TATCTCTTTCTTCACTTTCGAAGATTGATCTTGGAGCTCTAGAAGAAACTCTCAATTCTG 1876
Query 1875 TAAGGAAAACCTGTGACCATCCATACGTTATGGATGCATCTTTGAAACAACTGCTCACCA 1934
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1877 TAAGAAAAACCTGTGACCATCCATACGTTATGGATGCATCTTTGAAACAACTGCTCACCA 1936
Query 1935 AGAATCTGGAGTTGCATAAAATCCTGGATGTAGAAGTTAAAGCTAGCGGGAAACTTCAGC 1994
||||||||||||||||| ||||||||||||||||| ||||||| |||||||||||||| |
Sbjct 1937 AGAATCTGGAGTTGCATGAAATCCTGGATGTAGAAATTAAAGCGAGCGGGAAACTTCACC 1996
Query 1995 TCCTTGATGAAATGCTTACTCATATAAAAAAGAATGGTTTAAAAGCAGTTGTCTTCTACC 2054
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1997 TCCTTGATAAAATGCTTACTCATATAAAAAAGAATGGTTTAAAAGCAGTTGTCTTCTACC 2056
Query 2055 AGGCAGCACAAACTCCTGAAGGGCTTCTGCTTGGTAATATTCTCGAAGATTTTGTGGGTC 2114
||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2057 AGGCAACACAAACCCCTGAAGGGCTTCTGCTTGGTAATATTCTCGAAGATTTTGTGGGTC 2116
Query 2115 ACAGATTTGGTCCAAAATCTTATGAGCATGGGATCTATTCCTCAAAGAAGAA---CGCTA 2171
| |||||||||||||||||||||||||||||||| ||||||||||||||||| |||||
Sbjct 2117 AAAGATTTGGTCCAAAATCTTATGAGCATGGGATATATTCCTCAAAGAAGAACTCCGCTA 2176
Query 2172 TAAACAATTTCAACAAGGAGAGTCAATGCTGTGTTCTGCTGTTGGAAACACGTGCTTGCA 2231
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 2177 TAAACAATTTCAACAAGGAGAGTCAATGCTGTGTTCTGCTGTTGGAAACACGTGCCTGCA 2236
Query 2232 GTCAAACCATTAAACTCTTGCGGGCTGAAGTGTTTATTCTTTTTGGAAGCAGCTTGAATC 2291
|||||||||||||||||||||| ||||| | |||||||||||||||||||||||||||||
Sbjct 2237 GTCAAACCATTAAACTCTTGCGAGCTGATGCGTTTATTCTTTTTGGAAGCAGCTTGAATC 2296
Query 2292 CATCGCATGATGTTAAGCACTTAGAGAAGATAAAAATCGAGTCATGTTCTGAAAGAACTA 2351
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 2297 CATCGCATGATGTTAAGCACGTAGAGAAGATAAAAATCGAGTCATGTTCTGAAAGAACTA 2356
Query 2352 AGATATTCCGGTTGTACTCAGTTTGTACAGTTGAAGAAAAAGCCCTGATTCTGGCTAGGC 2411
|||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 2357 AGATATTCCGATTGTACTCAGTATGTACAGTTGAAGAAAAAGCCCTGATTCTGGCTAGGC 2416
Query 2412 AAAATAAGCGGCACCATAAGGCTGTAGAGAACCTAAGCCGTTCTCTCACGCATGCACTGC 2471
||||||||||||| |||| |||||||||||||||| ||| ||||||||||| |||||||
Sbjct 2417 AAAATAAGCGGCAAAATAAAGCTGTAGAGAACCTAAACCGCTCTCTCACGCACGCACTGC 2476
Query 2472 TCATGTGGGGGGCGACATACTTATTTGATAGGCTGGATCATTTTCACGGCAGTGAAACCC 2531
|||||||||||||| ||||||||||||||| ||||||||||||||| |||||||||| |
Sbjct 2477 TCATGTGGGGGGCGTCATACTTATTTGATAAACTGGATCATTTTCACAGCAGTGAAACTC 2536
Query 2532 CACATTCAGGAGTTTCATTTGAACAATCTATTATGGACGGTGTGATTCATGAATTCTCGT 2591
|| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 2537 CAGATTCAGGAGTTTCATTTGAACAATCTATTATGGACGGCGTGATTCATGAATTCTCGT 2596
Query 2592 CCATACTTTCTTCCAAAGGTGGAGAAGAAAATGAAGTCAAGCTGTGTCTACTTTTGGAAG 2651
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 2597 CCATACTTTCTTCCAAAGGTGGAGAAGAAAATGAAGTCAAGCTGTGTCTACTTTTGGAGG 2656
Query 2652 CCAAGCATGCTCAGGGAACTTACAGCACTGATTCTACTCTATTTGGTGAAGACCATATTA 2711
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 2657 CCAAGCATGCTCAGGGAACTTACAGCAGTGATTCTACTCTATTTGGTGAAGACCATATTA 2716
Query 2712 AGTTGTCAGATGACGATAGTCATAGTCCAAATATATTTTGGACAAAGCTGTTGGGGGGAA 2771
||||||||||||| || | | ||||||||||||||||| ||||||||||||||||||
Sbjct 2717 AGTTGTCAGATGAAGA--G--A--GTCCAAATATATTTTGGTCAAAGCTGTTGGGGGGAA 2770
Query 2772 AGAATCCTATGTGGAAATACCCTTCAGATACTCCCCAAAGGAATCGAAAAAGAGTTCAGT 2831
| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 2771 AAAATCCTATGTGGAAATACCCTTCAGATACTCCCCAAAGGAATCGAAAACGAGTTCAGT 2830
Query 2832 ATTTTGAGGGCTCTGAAGAGAGTCCCAAAATTGGCGATGGCGGAAATGCAAAGAAGCGAA 2891
|||||||||| ||||||| ||||||||||| ||||||||| |||||||||||||||||||
Sbjct 2831 ATTTTGAGGGTTCTGAAGCGAGTCCCAAAACTGGCGATGGTGGAAATGCAAAGAAGCGAA 2890
Query 2892 AGAAGGCTTCTGATGATGTCACTGATCCCC----C--TG-T-----AG-A--TGATGATG 2936
|||||||||||||||||||||||||||||| | || | || | ||||||||
Sbjct 2891 AGAAGGCTTCTGATGATGTCACTGATCCCCGGGTCACTGATCCGCCAGTAGATGATGATG 2950
Query 2937 AAAGAAAGGCCTCTGGGAAGGATCACATAGGGGCTTTGGAGTCACCAAAAGTCATAGCAC 2996
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||
Sbjct 2951 AAAGAAAGGCCTCTGGGAAGGATCACATGGGGGCTTTGGAGTCACCAAAAGTCATAACAC 3010
Query 2997 TCCAGTCATCATGTAAATCTACTTCTGGTGCACATGGTTCACTGGCTGGAAATGATACTT 3056
|||||||||||||||||||| | ||||| || ||||| || ||| |||||||||| |||
Sbjct 3011 TCCAGTCATCATGTAAATCT--T-CTGGTACAGATGGTACATTGGATGGAAATGATGCTT 3067
Query 3057 ATGGCTTGTATTCTATGGGCGGTCATATCTCTGGAATTCCAGAGGGTATGTTAGCTGGTC 3116
||||||||||||||||||| | |||||||||||||| ||||||| |||||||||| |||
Sbjct 3068 TTGGCTTGTATTCTATGGGCAGCCATATCTCTGGAATCCCAGAGGATATGTTAGCTAGTC 3127
Query 3117 ATGATTGGAGAAAAATACCGGGTGAATCACAGAGGAGGCTCCACGCTGTTTTAAAGCTGA 3176
| |||||| | |||||||||| |||||||||||||||||||||| |||||||||||| ||
Sbjct 3128 AAGATTGGGGGAAAATACCGGATGAATCACAGAGGAGGCTCCACACTGTTTTAAAGCCGA 3187
Query 3177 AGATGGTAAAACTTTGCCAAGTTTTGCATCTTTCAGATGCTTGCACAAGCATGGTCGAAA 3236
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 3188 AGATGGCAAAACTTTGCCAAGTTTTGCATCTTTCAGATGCTTGCACAAGCATGGTCGGAA 3247
Query 3237 ATTTTCTTGAATATGTTATTGAAAATCACCGAATCTACGAAGAGCCAGCCACCACATTGC 3296
||||||| |||||||||||||||||||||||||||||||||||||||||||| || || |
Sbjct 3248 ATTTTCTCGAATATGTTATTGAAAATCACCGAATCTACGAAGAGCCAGCCACTACTTTTC 3307
Query 3297 AGGCATTCCAGTTAGCCCTGAGTTGGATTGCAGCCTTGTTGGTAAAGCAAAATCTTAGCC 3356
||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 3308 AGGCATTCCAGATAGCCCTGAGTTGGATTGCAGCCTTGTTGGTAAAGCAAATTCTTAGCC 3367
Query 3357 ACAAAGAATCTCTGGTCCCTGCAAAATCTGAATTAGCTTTCGATTGCTCTAGAGTAGAGG 3416
|||||||||||||||||| |||||| ||||||||||||||| | ||||||||||||||||
Sbjct 3368 ACAAAGAATCTCTGGTCCGTGCAAATTCTGAATTAGCTTTCAAATGCTCTAGAGTAGAGG 3427
Query 3417 TGGATTATATATATTCGATATTGTCCTGCATGAAGAGTCTGTTCCTGGAGCGCACACAAG 3476
|||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 3428 TGGATTATATTTATTCGATATTGTCCTGCATGAAGAGTCTGTTCCTGGAGCATACACAAG 3487
Query 3477 GTTTGCAGTTCGATTGCTTTGGTACTAATTCTAAACAGTCAATGGTTAGCACACAACTAG 3536
||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||
Sbjct 3488 GTTTGCAGTTCGATTGCTTTGGTACTAATTCTAAACAGTCAGTGGTTAGCACAAAACTAG 3547
Query 3537 TGAATGAAAGTCTCTCAGGGGCTACAGTGCGTGAGGAAAAGAACAATACGAAGTCGATGC 3596
| |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||
Sbjct 3548 TAAATGAAAGTCTCTCAGGGGCTACAGTGCGTGACGAAAAGATTAATACGAAGTCGATGC 3607
Query 3597 GTAATAGTTCAGTGGATGAAGAATGCATTCCTGAGAAGAGATGTAGCCATTATAGCACAG 3656
| ||||| |||| ||||||||| ||||| ||||||||||||||||||||||||||||||
Sbjct 3608 GAAATAGCTCAGAGGATGAAGAGTGCATGACTGAGAAGAGATGTAGCCATTATAGCACAG 3667
Query 3657 CAACAAAAGATGTCGAAAAGACTATTAGCGACATAGAAAAGAAATGGAAGAAGCAAGTGC 3716
|||||| |||| |||||||||||||||| | |||| ||||||||| |||||||||||||
Sbjct 3668 CAACAAGAGATATCGAAAAGACTATTAGTGGCATAAAAAAGAAATACAAGAAGCAAGTGC 3727
Query 3717 AAAAGCTTGTACAAGAGCACGAGGAAAAGAAACTGGAGCTGTTAAATATGTATGCAGACA 3776
||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||
Sbjct 3728 AAAAGCTTGTACAAGAGCATGAGGAAAAGAAAATGGAGCTGTTAAATATGTATGCAGACA 3787
Query 3777 AGAAGCAGAAACTTGAAACTAGGAAAAATGTGGAAGCAGCAGTAATTCGTATTACCTGTT 3836
|||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||
Sbjct 3788 AGAAGCAGAAACTTGAAACTAGTAAAAGTGTGGAAGCAGCAGTAATTCGTATTACCTGTT 3847
Query 3837 CACGGACCAGTACTCAAGTGGATGATCTCAAACTGCTGGATCATAAGTT-TGAAAGAATG 3895
||||||||||||||||||||| |||||||||||||||||||||||| || |||||||| |
Sbjct 3848 CACGGACCAGTACTCAAGTGGGTGATCTCAAACTGCTGGATCATAA-TTATGAAAGAAAG 3906
Query 3896 TTTGATGAAATCAAAAGTGAGAAAAATGAATGCCTCAAAAGTCTGGAGCAAATGCACGAG 3955
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3907 TTTGATGAAATCAAAAGTGAGAAAAATGAATGCCTCAAAAGTCTGGAGCAAATGCACGAT 3966
Query 3956 GCTGCAAAGAAGAAGTTGGCTGAGGATGAAGCCTGTTGGATTAATCGGTTAAAGAGCTGG 4015
| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 3967 GTTGCAAAGAAGAAGTTGGCTGAGGATGAAGCCTGTTGGATTAATCGGATAAAGAGCTGG 4026
Query 4016 GCACAAGCTAATTTAAAAGTTTTTGTTCCCATACAAAGTCGCAACAACAAGCATCTTAGT 4075
||| ||||| |||||||||| ||||||||| |||||| |||| ||||||||| |||||
Sbjct 4027 GCA---GCTAAATTAAAAGTTTGTGTTCCCATTCAAAGTGGCAATAACAAGCATTTTAGT 4083
Query 4076 GGTCTATGCTCATCAAACATTTCCCAAAATGCTCCTGATGTACAAATTTGCAATGATA-T 4134
||| | | ||||||||||||||||||||||||||||||||||||||||||| || |
Sbjct 4084 GGT-T---C--ATCAAACATTTCCCAAAATGCTCCTGATGTACAAATTTGCAATAATGCT 4137
Query 4135 GAACGTTGAAGGTACTTATGCTGATACGAATT---TG-C--C-A-G---AA----G---- 4175
|||||||||| |||||| ||||||||||||| || | | | | || |
Sbjct 4138 -AACGTTGAAGCTACTTACGCTGATACGAATTGCATGGCTTCCAAGGTTAATCAAGTGCC 4196
Query 4176 A-A-G-A-AAA-CACATTAGCAACCATGTCGGGTGGCAGCACTCAACAAGTTCATGAAAT 4230
| | | | ||| |||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 4197 AGAAGCAGAAAACACATTAGGAACCATGTCGGGTGGCAGCACTCAACAAGTTCATGAAAT 4256
Query 4231 GGAGGCTGTAAGAAATGACAAGACGATGGATGTCTCAGATTTGTTTCATGGACAGCCTAC 4290
|| || ||||||||||||| |||| ||||||||||||| ||||| || || ||||| |
Sbjct 4257 GGTGGATGTAAGAAATGACGAGACAATGGATGTCTCAGCTTTGTCTCGTGAACAGC-T-- 4313
Query 4291 AAAGATTATGGTTACAAAGAGCCAGTCCAATGAGCACGCTTCTATCACTGTGCCTGAGAT 4350
| | ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4314 -----T-A------CAAAGAGCCAGTCCAATGAGCACGCTTCTATCACTGTGCCTGAGAT 4361
Query 4351 TTTGGTTCCTGCTGGCTGTCAAGAGGAATTTGCGGCCGTGAACATGCATTTGTCAGAAAA 4410
|||| ||||||||| |||||||||||||||||||||| ||||| |||||||||||||| |
Sbjct 4362 TTTGATTCCTGCTGACTGTCAAGAGGAATTTGCGGCCTTGAACGTGCATTTGTCAGAAGA 4421
Query 4411 CCAGAATTGTGACAGAATAACGTCTGCGGGACCAGATGAAGATGTTTCGTCAAGGGTGCC 4470
||||||||||||||||||||| ||||||| | |||||||||||||||| |||||||||||
Sbjct 4422 CCAGAATTGTGACAGAATAACATCTGCGGCATCAGATGAAGATGTTTCATCAAGGGTGCC 4481
Query 4471 AGAGGTATCCCAGTCACTTGAAAATCTTGCAAAGTCTGCCTCCCCCGAGTTTTCTTTGAA 4530
|||||||||||||||||| ||||||||| ||||||||||||||||||||| | ||
Sbjct 4482 AGAGGTATCCCAGTCACTCGAAAATCTT------TCTGCCTCCCCCGAGTTTTCTCTAAA 4535
Query 4531 TAGAGAGGAGGCTTTGGTTACAACAGAAAATA-ATAGAACAAGTCATGTGG-TTTCTGAT 4588
|||||||||||||||||||||||||||||||| | |||||||||||||||| ||| ||||
Sbjct 4536 TAGAGAGGAGGCTTTGGTTACAACAGAAAATAGA-AGAACAAGTCATGTGGGTTT-TGAT 4593
Query 4589 ACTGATAACATTTTTGACCAGCAGAATAGGGAAGCTTGTTCTCTTGACCAAGATATTCCT 4648
|||||||||||||| |||||||||||||| |||| |||||||||||||||||| ||||||
Sbjct 4594 ACTGATAACATTTTGGACCAGCAGAATAGAGAAGATTGTTCTCTTGACCAAGAGATTCCT 4653
Query 4649 GACGAGTTAGCGTTGCCTATGCCACATCCTGCGTCTGTGGTAGAGACTAGGAGTGCTACT 4708
|||||||||||| ||||| ||| ||||| |||||||||||||||||||||| ||||| ||
Sbjct 4654 GACGAGTTAGCGATGCCTGTGCAACATCTTGCGTCTGTGGTAGAGACTAGGGGTGCTGCT 4713
Query 4709 GAATCTGATCAGGATGGTCAAGATATATCTCCTATGCCTTCTTCTCTGGCTGGAAAGCAA 4768
|||||||||||| ||||||||||||||| ||||||||||||||| |||||||||||||||
Sbjct 4714 GAATCTGATCAGTATGGTCAAGATATATGTCCTATGCCTTCTTCACTGGCTGGAAAGCAA 4773
Query 4769 CCTGACCCAGCAGCAAACACCCTG-G-GCCAAAATCTTGAAGCAGCAATTGAGCTTCAGT 4826
|||||||||||||||||||| || | || |||||||||||| ||||||||||| |||||
Sbjct 4774 CCTGACCCAGCAGCAAACAC--TGAGAGCGAAAATCTTGAAGAAGCAATTGAGCCTCAGT 4831
Query 4827 CTGCTGGATCAGAAACAGTAGAGACCACTGATTTTGCTGCATCACATCAGGGTGATCAAG 4886
||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 4832 CTGCTGGTTCAGAAACAGTAGAGACTACTGATTTTGCTGCATCACATCAGGGTGATCAAG 4891
Query 4887 TTACATGTCCTTTGCCATCTTCACCGGCTGGAAATCAGCCTGCACCAGAAGCAAACATTG 4946
||||||||||||||| |||||||||| |||||||||||||||| ||||||||||| ||||
Sbjct 4892 TTACATGTCCTTTGCTATCTTCACCGACTGGAAATCAGCCTGCGCCAGAAGCAAATATTG 4951
Query 4947 GAAG-CCAAAATATCAATACATCAGCTGAGCCCCATGTAGCTGGTTCAGAGGCAGTAGAG 5005
||| |||||||||||| ||||||||||||||||||||||| ||| |||| |||||||||
Sbjct 4952 -AAGGCCAAAATATCAACACATCAGCTGAGCCCCATGTAGCGGGTCCAGATGCAGTAGAG 5010
Query 5006 AGTGGTGATTATGCAGTA-TCAGATCAGGAAACAATGGGTGCTCAGGATGCATGCTCTCT 5064
|||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||
Sbjct 5011 AGTGGTGATTATGCAGTAAT-AGATCAGGAAACAATGGGTGCTCAGGATGCATGCTCTCT 5069
Query 5065 GCCATCTGCATCGGTTGGAACTCAGTCTGACCTTGGAGCAAACAATGAGGGCCAAAATAT 5124
|||||||| |||||||||||||||||||||||| |||||||||| |||||| |||||| |
Sbjct 5070 GCCATCTGGATCGGTTGGAACTCAGTCTGACCTAGGAGCAAACATTGAGGGTCAAAATGT 5129
Query 5125 CACAACAGTGGCTCAGCTTCCCACAGATGGATCAGATGCAGTAGAAACTGGTGGATCTCC 5184
||||||||||||||| |||||||||||||||||||||||||| | ||| |||||||||||
Sbjct 5130 CACAACAGTGGCTCAACTTCCCACAGATGGATCAGATGCAGTTGTAACCGGTGGATCTCC 5189
Query 5185 TGTATCAGATCAGTGTGCTCAGGATGCATCTCCTATGCCATTATCTTCGCCTGGAAATCA 5244
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 5190 TGTATCAGATCAGTGTGCCCAGGATGCATCTCCTATGCCATTATCTTCGCCTGGAAATCA 5249
Query 5245 CCTTGATACAGCAGTTAACATTGAGGGTTTAAATAACACAACAATAGCTGAACCTCATAT 5304
|| ||||||||||||||| || ||||||||| |||||||| || ||||||| ||||||||
Sbjct 5250 CCCTGATACAGCAGTTAATATCGAGGGTTTAGATAACACATCAGTAGCTGAGCCTCATAT 5309
Query 5305 AAGTGGATCAGATGCATGTGAAATGGAAATTGCAGAACCTGGTCCCCAAGTAGAGCGGTC 5364
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 5310 AAGTGGATCAGATGCATGTGAAATGGAAATTTCAGAACCTGGTCCCCAAGTAGAGCGGTC 5369
Query 5365 AACCTTTGCAAATCTTGTCCATGAAGGTGGCGTGGAGCATTCAGCTGGTGTAACAGCTCT 5424
|||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||
Sbjct 5370 AACCTTTGCAAATCTTTTCCATGAAGGTGGCGTGGAGCATTCAGCAGGTGTAACAGCTCT 5429
Query 5425 TGTTCCATCACTTCTCAACAATGGTACGGAACAGAGTGCCGTTCAACCTGTTCCTCAAAT 5484
||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 5430 TGTTCCATCACTTCTTAACAATGGTACGGAACAGATTGCCGTTCAACCTGTTCCTCAAAT 5489
Query 5485 ACCTTTCCCTGTGTTCAATGACCCGTTTCTGCATGAACTGGAGAAGTTGCGGAGAGAATC 5544
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 5490 ACCTTTCCCTGTGTTCAACGACCCGTTTCTGCATGAACTGGAGAAGTTGCGGAGAGAATC 5549
Query 5545 AGAGAACTCAAAGAAGACTTTTGAAGaaaaaaaaTCAATCTTGAAAGCTGAACTCGAGAG 5604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 5550 AGAGAACTCAAAGAAGACTTTTGAAGAAAAAAAATCAATCTTGAAAGCTGAACTCGAGAG 5609
Query 5605 GAAGATGGCTGAAGTACAAGCAGAGTTTCAAAGAAAATTTAATGAGGTAGAAGCCGAGCA 5664
||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||
Sbjct 5610 GAAGATGGCTGAAGTACAAGCAGAGTTTCGAAGAAAATTTCATGAGGTAGAAGCCGAGCA 5669
Query 5665 TAACACAAGAACGACAAAGATAGAGACGGATAAGAATCTTGTTATAATGAACAAACTGTT 5724
|||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 5670 TAACACCAGAACGACAAAGATAGAGAAGGATAAGAATCTTGTTATAATGAACAAACTGTT 5729
Query 5725 GGCGAATGCGTTCTTGTCCAAATGTACTGACAAGAAGGTATCTCCCTCAGCAGCTCCAAG 5784
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 5730 GGCGAATGCGTTCTTGTCCAAATGTACTGACAAGAAGGTATCTCCCTCAGGAGCTCCAAG 5789
Query 5785 GGGTAGAATTCAGCAGCTAGCACAGAGAGCAACACAAGTGAGCGCACTGAGAAATTACAG 5844
||||| ||||||||||||||||||||||||| |||||||||| ||||||||||||||||
Sbjct 5790 GGGTAAAATTCAGCAGCTAGCACAGAGAGCAGCACAAGTGAGTGCACTGAGAAATTACA- 5848
Query 5845 TGCTTCGGCTCCTCAGCAGCTTCAGGCATCTTCTTTTCCTGCTCCTGCTCTGGTTCCGGC 5904
| | | ||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 5849 T--T--G-CTCCTCAGCAGCTTCAGGCATCTTCTTTTCCTGCTCCTGCTCTGGTTTCGGC 5903
Query 5905 TCCTCTGCAACTTCAGCAATCATCATTTCCTGCTCCTGGTCCGGCTCCTCTGCAGCCTCA 5964
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 5904 TCCTCTGCAACTTCAGCAATCATCATTTCCTGCTCCTGGTCCGGCTCCTCTGCAGCCTCA 5963
Query 5965 GGCATCTTCGTTTGCTTCTTCAGTCTCTCGTCCATCAGCCCTTCCTCTGAATTCCGCAGT 6024
||||||||||||| |||||||||||||||||||||||||||||| |||||||| || ||
Sbjct 5964 GGCATCTTCGTTTCCTTCTTCAGTCTCTCGTCCATCAGCCCTTCTTCTGAATTTTGCGGT 6023
Query 6025 CTGTCCAATGCCTCAGCCCAGACAGCCTCTCATATCCAACATAGCTCCAACTCCATCAGT 6084
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 6024 CTGTCCAATGCCTCAGCCCAGACAGCCTCTCATATCCAACATAGCTCCAACTCCATCAGT 6083
Query 6085 TTCCCCTGCAGCAAATCCAGTTGCCAGTGCAAGTCTGCGATCTCCTGCGCCACACCTAAA 6144
| | |||||| ||||||||| | | ||| || | | || | ||| |||||||||||
Sbjct 6084 TACTCCTGCAACAAATCCAGGT-C---TGC--GT-T-C--TC-C-TGCACCACACCTAAA 6131
Query 6145 CTCATATAGACAATCCTCTTCCACTTCCGTCGCCACAGCTACTCCAACCTCGTCAGTGCC 6204
||||||||||| ||||||||| ||| ||||||||||||||||||||||||||||||||||
Sbjct 6132 CTCATATAGACCATCCTCTTCAACTCCCGTCGCCACAGCTACTCCAACCTCGTCAGTGCC 6191
Query 6205 TCCTCAAGCTTTGACATATTCAGCTGTGTCAATTCAGAAGCAGCAGCAAGAAAAACAGCC 6264
||||||||||||||||||||||||||||||||||||| |||||||||||| |||| ||
Sbjct 6192 TCCTCAAGCTTTGACATATTCAGCTGTGTCAATTCAG---CAGCAGCAAGAACAACAACC 6248
Query 6265 GCAACAGAGCTTGAGGAGTGGAGGATTGCAGATG-AACAATGACGTGGTTTGTCTTTCTG 6323
||||||||||||||| |||||| ||||||| | |||||||| ||||||||||||||||
Sbjct 6249 GCAACAGAGCTTGAGCAGTGGA---TTGCAGA-GCAACAATGAAGTGGTTTGTCTTTCTG 6304
Query 6324 ACGACGAGTGAGCTAATAGGAGAGATGTTTAGGGT 6358
||||||||||| |||| |||||||||| |||||||
Sbjct 6305 ACGACGAGTGACCTAAGAGGAGAGATGGTTAGGGT 6339
Score = 1269 bits (687), Expect = 0.0
Identities = 980/1114 (88%), Gaps = 49/1114 (4%)
Strand=Plus/Plus
Query 1 CCGTACATAATTCTGTGAACCCAGTTCTCGTCTTCTTCAAACTTAAAATTTTCCGAAACC 60
||||||||||| ||| ||||||| |||||||||||||||||| | | ||||||||||||
Sbjct 84 CCGTACATAATCCTGCGAACCCAATTCTCGTCTTCTTCAAAC-T-CAGTTTTCCGAAACC 141
Query 61 CCAAACACCGTGAGGATTGCATGGCCTGAAGAAGCGCTTAATCGAGAATTGTGCTGGAAT 120
|||||||||| |||||||||||||||||||||| | ||||||||||||||||||||||||
Sbjct 142 CCAAACACCGCGAGGATTGCATGGCCTGAAGAACCACTTAATCGAGAATTGTGCTGGAAT 201
Query 121 TCTCAATTTCCAGATTTTACCTCGCG--TTT-TTTCACACTCTCGGAATCGGAAATTGCC 177
|||| | | ||||| ||||||| ||| ||||||||||||||||||||||||| ||
Sbjct 202 TCTC-A-----A-ATTTTCCCTCGCGTTTTTCTTTCACACTCTCGGAATCGGAAATTTCC 254
Query 178 ACCAAGCT-CGTGAAGCGATAGATTCTGACCA-T-CTCACTTTCGCGCAGAGAATATGAA 234
|||||||| ||| ||||||||||||||||| | | | ||||||||||||| |||||||||
Sbjct 255 ACCAAGCTCCGTCAAGCGATAGATTCTGACAATTACACACTTTCGCGCAGTGAATATGAA 314
Query 235 GAAAGATGAAAAGAATAGTTCGGCGGGGAGAACCATTTGCACCAGATCCCTAGCAGCTTC 294
|||||||||||||| | ||| | ||||||||||||||| |||||||||||||||||||||
Sbjct 315 GAAAGATGAAAAGATTGGTTTGACGGGGAGAACCATTTACACCAGATCCCTAGCAGCTTC 374
Query 295 AATTCCTACCTCAGCTGAACAAGAAACCCCTGGTTTGAGGAGGTCAAGCCGGGG-AGCAC 353
||||||| |||||| ||||||||||||||||||||||||||||||||||||||| | |||
Sbjct 375 AATTCCTGCCTCAGTTGAACAAGAAACCCCTGGTTTGAGGAGGTCAAGCCGGGGGA-CAC 433
Query 354 CATCTACGAATCTAGTAACTCCAGCTTCTGCTACTAGAAAGTCAGAGAGACTGGCTCCCT 413
|||||||||| || |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 434 CATCTACGAAGGTAATAACTCCAGCTTCTGCTACTAGAAAGTCAGAGAGACTGGCTCCCT 493
Query 414 CACCTGCTTCTGTTGCGATAAAGTCCGGTGGAATGGAGAAGAATTACACACCAAGTCCTC 473
|||||||||| ||| | | ||||||||||||||| | ||||||| |||||||||| ||
Sbjct 494 CACCTGCTTCAGTTTCAAAAAAGTCCGGTGGAATCGTCAAGAATTCCACACCAAGTTCTT 553
Query 474 TGCGAAGGTCCAATAGGGGAAAGAATGTAGTATCCTTGCAGAATTCCAAAGGATCAGATA 533
||||||||||||||||||| |||| || |||||||||||||| |||||||||||||||||
Sbjct 554 TGCGAAGGTCCAATAGGGGGAAGACTGAAGTATCCTTGCAGAGTTCCAAAGGATCAGATA 613
Query 534 ATTCTGGCAGGAACGCAGACACTTCATCGGATATTGAGCAGAGGAAGGATAAAAGGAAAA 593
||||| |||||| | ||| |||||| |||||||||||||||| ||||||| |
Sbjct 614 ATTCTATCAGGAAAGGAGATACTTCACCGGATATTGAGCAGAGAAAGGATA---G----- 665
Query 594 ACAGTGTTGAAGAGTCGACAAATAAGATCAACAAACAGGGGCCTCTAATGTCAGCCCGAA 653
|||||||||||||||| |||||||||| | ||| |||||||||||||||
Sbjct 666 ----TGTTGAAGAGTCGACAGATAAGATCAA------G---CCTATAATGTCAGCCCGAA 712
Query 654 GTTTCAGAGCGTTGTTTAGAGGGAAGCTCAAGGACTCCGAGGCATTAGTTGATGTTTCTC 713
||| ||| || ||||||||||||||||||||||| || |||||||||||||||| ||| |
Sbjct 713 GTTACAGGGCATTGTTTAGAGGGAAGCTCAAGGAATCTGAGGCATTAGTTGATGCTTCCC 772
Query 714 CAAATGAAGAGGAACTAGTAGTTGTTGGTTGTTCTCGCCGCATACCTGCAGGCAATGATG 773
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 773 CAAATGAAGAGGAACTAGTAGTTGTTGGTTGTTCTCGCCGCATACCTGCAGGCAATGATG 832
Query 774 ATGCTCAAGGTAAAACAGATTGTCCCCCACCTGCAAATGCAGGATCAAAAAGGCTGCCAG 833
||| ||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||
Sbjct 833 ATGTTCAAGGTAAAACAGATTGTCCACCACCTGCAGATGCAGGATCAAAAAGGCTGCCAG 892
Query 834 TTGGCGAAACTAGTTTGGAGAAGGGCACTGACTTTCCTTTGAAATC-GATTACGGACACC 892
||| ||||||||||||||| ||||||||||| |||||||||||||| | ||||||| |||
Sbjct 893 TTGACGAAACTAGTTTGGACAAGGGCACTGATTTTCCTTTGAAATCAG-TTACGGAGACC 951
Query 893 GAAAATATGGTGCTTGATGCATCCCCCATAGTTGAAACTGGGGATGACAGTGTAATTGGT 952
|| || || |||||||||||||||||||||||||||||||||||||||||||| || |||
Sbjct 952 GAGAAGATAGTGCTTGATGCATCCCCCATAGTTGAAACTGGGGATGACAGTGTTATAGGT 1011
Query 953 TCTCCATCTGAGAATTTAGAGACGCAAAAGCTTCAAGATGGTAACACAGATTGTCCACCA 1012
|| |||||||||||||||||||| |||||||||||||||||||| ||||||||| |||||
Sbjct 1012 TCACCATCTGAGAATTTAGAGACACAAAAGCTTCAAGATGGTAAGACAGATTGTTCACCA 1071
Query 1013 CCTGCAAATACAGAATCAAAAAGGCTCGTTA-TAGGTTCACC-A-TCTGAGAAGTTAGAG 1069
||||||||| ||||||| |||| ||| | | | ||| | | | | | |||| |||
Sbjct 1072 CCTGCAAATGCAGAATCGAAAACGCT-GCCAGTTGGTGAAACTAGTTT-AGAAAA-AGAA 1128
Query 1070 -A-C-ACAAAAGCTTCAAGATGGTAACACAGATT 1100
| | ||||||| ||||||||| |||||||||||
Sbjct 1129 TATCCACAAAAGTTTCAAGATGATAACACAGATT 1162
Score = 226 bits (122), Expect = 2e-57
Identities = 178/205 (87%), Gaps = 4/205 (2%)
Strand=Plus/Plus
Query 784 TAAAACAGATTGTCCCCCACCTGCAAATGCAGGATCAAAAAGGCTGCCAGTTGGCGAAAC 843
||| |||||||||| |||||||||||||||| |||||||||||||||||||||||||||
Sbjct 1152 TAACACAGATTGTCTACCACCTGCAAATGCAGAATCAAAAAGGCTGCCAGTTGGCGAAAC 1211
Query 844 TAGTTTGGAGAAGGGCACTGACTTTCCTTTGAAATCGATTACGGACACCGAAAATATGGT 903
|||||| || |||| |||||| |||||||||||||| | |||||| || | ||| |||||
Sbjct 1212 TAGTTTAGAAAAGGACACTGATTTTCCTTTGAAATCAACTACGGAGACTGGAAAGATGGT 1271
Query 904 GCTTGATGCATCCCCCATAGTTGAAACTGGGGATGACAGTGTAAT-TGGTTCTCCATCTG 962
||| ||||||||||||||||||||||| |||||||||| || || || ||| ||||||
Sbjct 1272 TCTTTATGCATCCCCCATAGTTGAAACTAGGGATGACAGCGTTATATG-TTCACCATCT- 1329
Query 963 AGAA-TTTAGAGACGCAAAAGCTTC 986
| || |||||| || ||||||||||
Sbjct 1330 ACAAATTTAGAAACCCAAAAGCTTC 1354
Score = 102 bits (55), Expect = 4e-20
Identities = 59/61 (97%), Gaps = 0/61 (0%)
Strand=Plus/Plus
Query 1040 GTTATAGGTTCACCATCTGAGAAGTTAGAGACACAAAAGCTTCAAGATGGTAACACAGAT 1099
||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||
Sbjct 1003 GTTATAGGTTCACCATCTGAGAATTTAGAGACACAAAAGCTTCAAGATGGTAAGACAGAT 1062
Query 1100 T 1100
|
Sbjct 1063 T 1063
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 324964316362
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5