BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg470863
Length=2407
Score E
Sequences producing significant alignments: (Bits) Value
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-l... 3770 0.0
> AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2514192-2516605 REVERSE LENGTH=2414
Length=2414
Score = 3770 bits (2041), Expect = 0.0
Identities = 2291/2413 (95%), Gaps = 12/2413 (0%)
Strand=Plus/Plus
Query 1 AAGAAGATGATACCCTCGTGttctcctctcaccgttccttcttcttcttacccattccat 60
||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 AAGAAGATGATGCTCTCGTGTTCTCCTCTCACCGTTCCTTCTTCTTCTTACCCATTCCAT 60
Query 61 ttccttccttcttcttccgatcctccttacgattctctccgaaaccacccttctctttct 120
||||||||||| ||||| ||||| |||||||||||| | ||||| |||||||||||||||
Sbjct 61 TTCCTTCCTTCGTCTTCTGATCCCCCTTACGATTCTATACGAAATCACCCTTCTCTTTCT 120
Query 121 cttctccACAATTGCAAAACTCTTCAATCTCTCCGCATTATCCACGCTCAGATGATCAAA 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 121 CTTCTCCACAATTGCAAAACTCTTCAATCTCTCCGCATTATCCACGCTCAGATGATCAAA 180
Query 181 ACT-GGCCTCCACAACACCAATTACGCTCTCAGCAAGCTTCTTGAGTTATGCGTTATATC 239
| | || |||||||||||||||||||||||||| |||||| ||||||| ||| || | ||
Sbjct 181 A-TCGGTCTCCACAACACCAATTACGCTCTCAGTAAGCTTATTGAGTTCTGCATTCTCTC 239
Query 240 TCCACATTTTGATGGCCTTCCTTATGCGATCTCTGTTTTCGAAACGATTCAGGAGCCGAA 299
|||||| ||||| ||||||||||||||||| ||||||||| |||| ||||||||||| ||
Sbjct 240 TCCACACTTTGAAGGCCTTCCTTATGCGATATCTGTTTTCAAAACTATTCAGGAGCCAAA 299
Query 300 CCTGTTGATTTGGAACACAATGTTTCGTGGACACGCGTTGAGTTCGGACCCTGTTTCTGC 359
|||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||
Sbjct 300 CCTGTTGATTTGGAACACGATGTTTCGTGGGCACGCGTTGAGTTCGGACCCTGTTTCTGC 359
Query 360 TCTGAAGATGTATGTTTGTATGATTTCACTTGGGCTTCTTCCTAATTCCTACACGTTTCC 419
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 360 TCTGAAGCTGTATGTTTGTATGATTTCACTTGGGCTTCTTCCTAATTCCTACACGTTTCC 419
Query 420 ATTTCTATTGAAATCTTGTGCAAAGTCCAAGGCTTTTAAGGAAGGGCAACAGATCCACGG 479
||| |||||||||||||||||||||| || |||||||||||||||||||||||||| ||
Sbjct 420 GTTTGTATTGAAATCTTGTGCAAAGTCGAAAGCTTTTAAGGAAGGGCAACAGATCCATGG 479
Query 480 GCACGTTTTGAAACTTGGGTATGATCTAGATTTGTTTGTACATACTTCTCTGATCTCTGT 539
||| |||||||||||||| | |||||||||||||| |||||||||||||||||||||| |
Sbjct 480 GCATGTTTTGAAACTTGGATGTGATCTAGATTTGTATGTACATACTTCTCTGATCTCTAT 539
Query 540 GTACGTTCAAAACGGGAGATTGGAAGATGCACGTAAGGTGTTCGATAGAAGTCCTCACCG 599
||| || ||||||||||||||||||||||||| |||||||||||||| ||||||||||||
Sbjct 540 GTATGTCCAAAACGGGAGATTGGAAGATGCACATAAGGTGTTCGATAAAAGTCCTCACCG 599
Query 600 AGATGTGGTTTCCTATACAGCTTTGATCAAGGGTTATGCATCAAGAGGCTATATCGAAAG 659
|||||||||||| || |||||||||||||||||||||||||| ||||||||||||||||
Sbjct 600 AGATGTGGTTTCATACACAGCTTTGATCAAGGGTTATGCATCGAGAGGCTATATCGAAAA 659
Query 660 TGCACAGAAGTTGTTCGATGAAATTCCAGTGAAAGACGTAGTGTCATGGAATGCAATGAT 719
||||||||||||||||||||||||||| || ||||||||||| |||||||||||||||||
Sbjct 660 TGCACAGAAGTTGTTCGATGAAATTCCCGTTAAAGACGTAGTATCATGGAATGCAATGAT 719
Query 720 TTCAGGATATGCCGAAACCGGTAACTATAAAGAAGCATTAGAATTGTTTAAAGAGATGAT 779
|||||||||||| ||||||||||||||||| ||||| ||||||||||||||||| |||||
Sbjct 720 TTCAGGATATGCTGAAACCGGTAACTATAAGGAAGCGTTAGAATTGTTTAAAGATATGAT 779
Query 780 GAAGACGAATATTAGGCCAGACGAGAGTACAATGGTCACTGTAGTTTCTGCTTGTGCTCA 839
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 780 GAAGACGAATGTTAGGCCAGACGAGAGTACAATGGTCACTGTAGTTTCTGCTTGTGCTCA 839
Query 840 GTCTGGTAGCATTGAATTGGGGCGTCAGGTACATTCATGGATTGATGATCATGGGTTTGG 899
||||||||| ||||||||||| ||||||||||||| ||||||||||||||||||||||||
Sbjct 840 GTCTGGTAGTATTGAATTGGGTCGTCAGGTACATTTATGGATTGATGATCATGGGTTTGG 899
Query 900 TTCAAATCTTAAGATTGTTAATTCTCTCATGGATTTGTACTCAAAATGTGGGGAATTGGA 959
||||||||| |||||||||||| ||||||| ||||| ||||| |||||||| ||||||||
Sbjct 900 TTCAAATCTCAAGATTGTTAATGCTCTCATTGATTTATACTCGAAATGTGGTGAATTGGA 959
Query 960 GACAGCATGTGGTTTGTTCGAAGGATTGCTGTACAAGGATGTAATTTCTTGGAATACCTT 1019
|||||| ||||||||||||||| |||||| ||||||||||||||||||||||||||||||
Sbjct 960 GACAGCGTGTGGTTTGTTCGAAAGATTGCCGTACAAGGATGTAATTTCTTGGAATACCTT 1019
Query 1020 GATCGGTGGTTACACACATATGAATCTTTACAAAGAAGCATTGTTGTTGTTTCAAGAAAT 1079
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1020 GATCGGTGGTTACACACATATGAATCTTTACAAAGAAGCATTGTTGTTGTTTCAAGAAAT 1079
Query 1080 GCTGAGATCAGGCGAAAGGCCAAACGATGTAACAATGCTAAGTATTCTTCCTGCTTGTGC 1139
||| |||||||| |||| ||||||||||| |||||||||||||||||||||||||||||
Sbjct 1080 GCTTAGATCAGGTGAAACTCCAAACGATGTGACAATGCTAAGTATTCTTCCTGCTTGTGC 1139
Query 1140 ACACCTTGGAGCCATAGATATTGGAAGATGGATTCATGTGTATATCGACAAGAGATTAAA 1199
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1140 ACACCTTGGAGCCATAGATATTGGAAGATGGATTCATGTGTATATCGACAAGAGATTAAA 1199
Query 1200 GAGTGCTACAAATGCTTCTTCTCTCCGGACAAGCCTTATTGACATGTATGCTAAATGTGG 1259
| ||| ||| ||||||||||||||||| |||||||| |||||||||||||||||||||||
Sbjct 1200 GGGTGTTACGAATGCTTCTTCTCTCCGTACAAGCCTGATTGACATGTATGCTAAATGTGG 1259
Query 1260 AGACATAGAGGCAGCACACCAAGTGTTCAACAGTATACTCCATAAAAGCTTGTCGTCTTG 1319
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1260 AGACATAGAGGCAGCACACCAAGTGTTCAACAGTATACTCCATAAAAGCTTGTCGTCTTG 1319
Query 1320 GAACGCAATGATATTTGGGTTTGCGATGCACGGGAGAGCTGATGCAGCATTTGATCTTTT 1379
|||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||
Sbjct 1320 GAACGCAATGATATTTGGGTTTGCAATGCACGGGAGAGCTGATGCATCATTTGATCTTTT 1379
Query 1380 CTCGAGAATGAGAAAGATTGGGATTGAACCAGATGATATCACGTTTGTTGGTTTGTTGTC 1439
||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 1380 CTCAAGAATGAGAAAGATTGGGATTCAACCAGATGATATCACGTTTGTTGGTTTGTTGTC 1439
Query 1440 TGCTTGTAGCCATTCAGGTATGTTAGATCTTGGACGCCATATTTTCAGAACAATGACACA 1499
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 1440 TGCTTGTAGCCATTCAGGTATGCTAGATCTTGGACGCCATATTTTCAGAACAATGACACA 1499
Query 1500 GGACTACAAAATAACCCCGAAATTAGAGCACTACGGTTGCATGATTGATCTTTTGGGTCA 1559
|||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 1500 GGACTACAAAATGACCCCAAAATTAGAGCACTACGGTTGCATGATTGATCTTTTGGGTCA 1559
Query 1560 TTCGGGTCTATTCAAAGAAGCGGAAGAAATGATAAACAAT-ATGGAAATGGAGCCCGATG 1618
|||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||
Sbjct 1560 TTCGGGTCTATTCAAAGAAGCGGAAGAAATGATAAACA-TGATGGAAATGGAGCCCGATG 1618
Query 1619 GAGTGATTTGGTGCTCCCTTCTCAAAGCTTGCAAGATTCATGGGAATGTCGAGTTGGGTG 1678
||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
Sbjct 1619 GAGTGATTTGGTGCTCCCTTCTCAAAGCTTGCAAGATGCATGGGAATGTCGAGTTGGGCG 1678
Query 1679 AATCCTTTGCACAAAACCTCATTAAGATAGAGCCAGAAAACCCAGGTTGTTATGTACTCC 1738
|||| |||||| |||||||||||||||| ||||||||||||||||||| ||||||||| |
Sbjct 1679 AATCATTTGCAGAAAACCTCATTAAGATTGAGCCAGAAAACCCAGGTTCTTATGTACTTC 1738
Query 1739 TATCAAACATTTACGC-TACAGCAGGCAGATGGAACGAAGTAGCAAAAATACGAGCACTC 1797
| || |||||||| || | ||||||| |||||||||||||||||||||| |||||| |||
Sbjct 1739 TGTCTAACATTTATGCCT-CAGCAGGAAGATGGAACGAAGTAGCAAAAACACGAGCTCTC 1797
Query 1798 CTCAATGATAAAGGTATGAAAAAAGTTCCTGGTTGCAGCTATATCGAAATAGATTCTGTG 1857
|||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||
Sbjct 1798 CTCAATGATAAAGGTATGAAGAAAGTTCCTGGTTGCAGCTCTATCGAAATAGATTCTGTG 1857
Query 1858 GTCCATGAGTTCATCATCGGGGATAAATTCCATCCACGGAACAGAGAAATCTACGGAATG 1917
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1858 GTCCATGAGTTCATCATCGGGGATAAATTCCATCCACGGAACAGAGAAATCTACGGAATG 1917
Query 1918 TTAGAAGAAATGGAGGTGTTACTGGAGAAAGCCGGGTTTGTTCCAGATACTTCTGAAGTC 1977
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 1918 TTAGAAGAAATGGAGGTGTTACTAGAGAAAGCCGGGTTTGTTCCAGATACTTCTGAAGTC 1977
Query 1978 TTGCAGGAGATGGAAGAAGAATGGAAAGAAGGAGCGTTGCGGCATCACAGCGAGAAGCTA 2037
|||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||
Sbjct 1978 TTGCAGGAGATGGAAGAAGAATGGAAGGAAGGAGCATTGCGGCATCACAGCGAGAAGCTA 2037
Query 2038 GCTATTGCATTTGGGTTGATCAGTACAAAGCCTGGGACTAAACTTACAATCGTGAAGAAT 2097
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2038 GCTATTGCATTTGGGCTGATCAGTACAAAGCCTGGGACTAAACTTACAATCGTGAAGAAT 2097
Query 2098 CTAAGGGTGTGCAGAAATTGTCATGAGGCTACAAAGTTTATATCAAAGATTTACAAAAGG 2157
|||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 2098 CTAAGGGTATGCAGAAATTGTCATGAGGCTACAAAGCTTATATCAAAGATTTACAAAAGG 2157
Query 2158 GAGATTATTGCTAGAGACAGAACTCG-TTTCCATCATTTTAGAGATGGTGTTTGCTCCTG 2216
|||||||||||||||||||||||||| |||| |||||||||||||||||||||| |||||
Sbjct 2158 GAGATTATTGCTAGAGACAGAACTCGGTTTC-ATCATTTTAGAGATGGTGTTTGTTCCTG 2216
Query 2217 CAATGACTACTGGTAGCCATCATTTCAGAAGATCTTGTTACCAATGATGTTGGTCAAGAA 2276
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 2217 CAATGACTACTGGTAGCCATCATTTCAGAGGATCTTGTTACCAATGATGTTGGTCAAGAA 2276
Query 2277 CTGTAATATAACTTTCTTTGTGTGGCT-GCTGTAGATTTCAACAAGATTAGTCAAGCAAG 2335
||||||||| ||||||||||||||| | |||||| ||| ||| |||||||||||||||||
Sbjct 2277 CTGTAATATGACTTTCTTTGTGTGG-TAGCTGTAAATTACAAGAAGATTAGTCAAGCAAG 2335
Query 2336 TAAATTACATATAAGGCGTTAA-TGATTCATTGATGTAAGTGTATACATGTAAAGAAAGA 2394
|||||| ||||||||| || || ||||||||||||||||| |||||||||||||||||||
Sbjct 2336 TAAATTGCATATAAGGTGT-AACTGATTCATTGATGTAAGGGTATACATGTAAAGAAAGA 2394
Query 2395 GTTTTCACTTTTC 2407
||||||||||||
Sbjct 2395 CTTTTCACTTTTC 2407
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 119527497645
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5