BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg470908
Length=1376
Score E
Sequences producing significant alignments: (Bits) Value
AT1G08470.1 | Symbols: SSL3 | strictosidine synthase-like 3 | c... 1910 0.0
AT5G22020.1 | Symbols: | Calcium-dependent phosphotriesterase ... 294 1e-78
> AT1G08470.1 | Symbols: SSL3 | strictosidine synthase-like 3 |
chr1:2682127-2684100 REVERSE LENGTH=1431
Length=1431
Score = 1910 bits (1034), Expect = 0.0
Identities = 1220/1304 (94%), Gaps = 35/1304 (3%)
Strand=Plus/Plus
Query 1 TTTTAAATTTTCAACCAGaaaaaaaaGTGTA---TACT--AACTACTTCCAACTACTTCT 55
|||||||||||||||||| ||||||||| |||| |||||||| | || || ||
Sbjct 1 TTTTAAATTTTCAACCAG----AAAAGTGTACTCTACTGCAACTACTT-CTTCT-CTACT 54
Query 56 TCTCTGCCTTAAAACTTCCCCATCCAATTTCTTCTTC--A--A--ATCATCA-------T 102
||||| |||||||||||||||| ||| |||||||||| | | ||||||| |
Sbjct 55 TCTCTACCTTAAAACTTCCCCAACCATTTTCTTCTTCAAATCATCATCATCATCCCTCGT 114
Query 103 -C----AAAATGGCTTTGAGCATAGTCGCGAAGATCTTTCTCGTCTTTGCCATCTATTGC 157
| |||||||| |||||||| |||||||||||||||||||||||||||||||||||
Sbjct 115 ACAAAGAAAATGGCCATGAGCATACTCGCGAAGATCTTTCTCGTCTTTGCCATCTATTGC 174
Query 158 GCTCTCGATCCCTTCAGTCACAGCTCCATTTCCAAGTTCCCGGACTTCAAAACTTACACG 217
||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
Sbjct 175 GCTATCGATCCCTTCAGTCACAGCTCCATTTCCAAGTTCCCGGATTTCAAAACTTACAAG 234
Query 218 ATTGACATGCCTCCATTATCGTCCCTTCCCAAGGAGAGAGACCGTGAGAATCTGCTT-CA 276
|||||||||||||| |||||||| ||||| |||||||||||||| |||||||| || ||
Sbjct 235 ATTGACATGCCTCCGTTATCGTCACTTCCAAAGGAGAGAGACCGCCAGAATCTG-TTGCA 293
Query 277 GAATTCGGAGATCAGGTTTCTTAACGAGGTTCAAGG-CCCTGAGAGTATTGCTTTCGATC 335
|||||| ||||||||||||||||||||||||||||| ||| ||||| |||||||||||||
Sbjct 294 GAATTCAGAGATCAGGTTTCTTAACGAGGTTCAAGGTCCC-GAGAGCATTGCTTTCGATC 352
Query 336 CGCAAGGTCGTGGTCCTTATACCGGAGTCGCCGACGGTCGAATCCTCTTTTGGAATGGCA 395
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 353 CGCAAGGTCGTGGTCCTTATACCGGAGTCGCCGACGGTCGAATTCTCTTTTGGAATGGCA 412
Query 396 CTCGTTGGACCGATTTCGCCTATACTTCGAACAATCGGTCAGAGCTATGTGATCCAAAGC 455
|||||||||| |||||||| ||||||||||||||||||||||||||||||||||| ||||
Sbjct 413 CTCGTTGGACAGATTTCGCATATACTTCGAACAATCGGTCAGAGCTATGTGATCCTAAGC 472
Query 456 CATCACTTTTGGATTACTTAAAGGATGAAGATATCTGTGGTCGGCCTTTAGGTCTTCGAT 515
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 473 CATCGCTTTTGGATTACTTAAAGGATGAAGATATCTGTGGTCGGCCTTTAGGTCTTCGAT 532
Query 516 TCGACaa-aaaaaCTGGGGATTTGTACATTGCAGATGCGTATTTGGGGATAATGAAAGTT 574
||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 533 TCGACAAGAAAAA-TGGGGATTTGTACATTGCAGATGCGTATTTGGGGATAATGAAAGTT 591
Query 575 GGTCCTGAAGGAGGTTTAGCAACTTGTGTTACAAACGAGGCAGATGGTGTGCCTTTGAGA 634
||||| ||||||||||||||||||| ||||||||||||||| ||||||||||||||||||
Sbjct 592 GGTCCGGAAGGAGGTTTAGCAACTTCTGTTACAAACGAGGCTGATGGTGTGCCTTTGAGA 651
Query 635 TTTACCAATGATCTTGACATTGATGACCAAGGCAATGTTTACTTTACTGATAGCAGTTCT 694
|||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||
Sbjct 652 TTTACCAATGATCTTGACATTGATGATGAAGGCAATGTTTACTTTACTGATAGCAGCTCT 711
Query 695 TTTTTCCAACGAAGGAAATTCATGCTTTTGATTGTCTCGGGGGAAGACAGCGGGAGGGTG 754
|| ||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||
Sbjct 712 TTCTTCCAACGAAGGAAATTTATGCTTTTGATTGTCTCGGGGGAAGACAGTGGGAGGGTG 771
Query 755 TTGAAATACAATCCAAAAACAAAGGAGACTACCACTCTCGTAAGAAATCTCCAGTTTCCT 814
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 772 TTGAAATACAATCCAAAAACAAAGGAGACTACCACTCTCGTGAGAAATCTCCAGTTTCCT 831
Query 815 AATGGATTATCCCTCGGCAAAGACGGCTCCTTTTTCATATTTTGTGAAGGATCAATTGGA 874
|| ||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||
Sbjct 832 AACGGATTATCCCTCGGCAAAGACGGCTCCTTTTTCATCTTTTGTGAAGGATCTATTGGA 891
Query 875 AGATTACGGAAATACTGGTTGAAAGGAGAAAAAGCTGGAACGTCAGAAGTGGTAGCTCTA 934
|||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||
Sbjct 892 AGATTACGGAAATACTGGTTGAAAGGGGAGAAAGCTGGAACGTCAGAAGTGGTAGCTCTA 951
Query 935 TTACATGGGTTCCCAGACAACATCCGCACAAACAAAGACGGGGATTTCTGGGTGGCGGTG 994
|||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||
Sbjct 952 TTACATGGGTTCCCAGACAACATCCGCACAAACAAAGATGGAGATTTCTGGGTGGCGGTG 1011
Query 995 CACTGCCACAGAAACATATTCACACACGTGATGGCGCATCACCCGAGGGTGAGGAAGTTC 1054
||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||
Sbjct 1012 CACTGCCACAGAAACATATTCACACACTTGATGGCGCATTACCCGAGGGTGAGGAAGTTC 1071
Query 1055 TTTCTGAAGCTGCCGATATCAGTGAAGTTTCAGTACTTGCTGCAGGTAGGTGGTTGGCCT 1114
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1072 TTTCTGAAGCTGCCGATATCAGTGAAGTTTCAGTACTTGCTGCAGGTAGGTGGTTGGCCT 1131
Query 1115 CATGCGGTGGCTGTGAAGTACAGTGAAGAAGGGAAGGTGCTAAAGGTGTTGGAAGATAGC 1174
||||| || |||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 1132 CATGCTGTAGCTGTGAAGTACAGTGAAGAAGGGAAAGTGCTAAAGGTGTTGGAAGATAGT 1191
Query 1175 AAAGGGAAAGTGGTGAAGGCAGTGAGTGAAGTGGAGGAGAAAGATGGGAAGCTTTGGATG 1234
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1192 AAAGGGAAAGTGGTGAAGGCAGTGAGTGAAGTGGAGGAGAAAGATGGGAAGCTTTGGATG 1251
Query 1235 GGAAGTGTATTGATGTCTTTCATTGCCGTGTATGACTTGCCTTA 1278
||||||||||||||||| ||||||||||| ||||||||||||||
Sbjct 1252 GGAAGTGTATTGATGTCCTTCATTGCCGTATATGACTTGCCTTA 1295
> AT5G22020.1 | Symbols: | Calcium-dependent phosphotriesterase
superfamily protein | chr5:7287736-7289482 REVERSE LENGTH=1455
Length=1455
Score = 294 bits (159), Expect = 1e-78
Identities = 669/904 (74%), Gaps = 80/904 (9%)
Strand=Plus/Plus
Query 407 GATTTCGCCTATACTTCGAACAATCGGTCAGAGCTATGTGATCCAAAGCCATC-ACTTTT 465
|||||||| |||||||||| ||||| || ||| | |||||||| ||||| || | |||
Sbjct 444 GATTTCGCTTATACTTCGAGTAATCGATCGGAGATTTGTGATCCGAAGCCTTCTGC-TTT 502
Query 466 GGA-TTACTTAAAGG-ATGAAGATATCTGTGGTCGGCCTTTAGGTCTTCGATTCGACaaa 523
|| |||||| ||| ||||| |||| |||||||| |||||||||||||| ||||| ||
Sbjct 503 -GAGTTACTT-GAGGAATGAACATATATGTGGTCGTCCTTTAGGTCTTCGTTTCGATAAG 560
Query 524 aaaaCTGGGGATTTGTACATTGCAGATGCGTATTTGGGGA-TAATGAAAGTTGGTCCTGA 582
| ||| || |||||||| || || ||||| ||| | |||| | ||||||||||||||||
Sbjct 561 AGAACCGGAGATTTGTATATAGCTGATGCTTATAT-GGGACTTTTGAAAGTTGGTCCTGA 619
Query 583 AGGAGGTTTAGCAACTTG-TG-TTACAAAC-GAGGCAGATGGTGTGCCTTTGAGATTTAC 639
||| ||||||||||| | | || ||| || || || |||||||| ||| | |||||
Sbjct 620 AGGTGGTTTAGCAAC--GCCGCTT-GTAACTGAAGCTGAAGGTGTGCCGTTGGGGTTTAC 676
Query 640 CAATGATCTTGACATTGATGACCAAGGCAA-TGTTTACTTTACTGATAGCAGTTC-TT-T 696
|||||||||||||||| ||| | || || |||||||||||| |||||||| | ||
Sbjct 677 TAATGATCTTGACATTGCTGATGATGG-AACTGTTTACTTTACAGATAGCAG--CATTAG 733
Query 697 TTTCCA-ACGAAGGAAATTCATGC-TTTTGATTGTCTCGGGGGA-AGACAGC-GGGAGGG 752
|| ||| | | ||||| ||| ||| | | || |||| || || | | | | |||||||
Sbjct 734 TTACCAGA-GGAGGAACTTCTTGCAGCTCG-TTTTCTCTGGAGACA-ATA-CTGGGAGGG 789
Query 753 TGT-TGAAA-TACAATCCAAAAACAAAGGAGA-CTACCACTCTCGTAAGAAATCTCCAGT 809
| | | ||| || ||||| | | || || | || | | || |||||| ||||
Sbjct 790 T-TCT-AAAGTATGATCCAGTAGCTAA-GAAAGCTGTTGTTTTGGTCTCAAATCTTCAGT 846
Query 810 TTCCTAATGGAT-TATCCCTCGGCAAAGACGGCTCCTTT-TTCATATTTTGTGAAGGATC 867
|||| ||||| | | || || ||| |||||| | |||| || |||| || ||||||
Sbjct 847 TTCCGAATGG-TGTCTCTATCAGCAGAGACGG-TTCTTTCTTTGTATTCTGCGAAGGA-G 903
Query 868 A-ATTGGAAGATTACGGAA-ATACTGGTTGAAAGGAGAAAAAGCTGGAACGTCAGAAGTG 925
| |||||||| ||| ||| ||||||||||||||| || |||||||||||| |||| |||
Sbjct 904 ATATTGGAAGCCTAC-GAAGATACTGGTTGAAAGGCGAGAAAGCTGGAACGACAGATGTG 962
Query 926 GTAGCTCTA-TTA-CATGGG-TTCCCAGACAACATCCGCA-CAAACAAAGACGGG-G-AT 979
| || || ||| || ||| | || || ||| | | | ||| |||| | ||| | ||
Sbjct 963 TTTGC-GTATTTACCA-GGGCAT-CCTGATAACGTAAGAACCAACCAAA-A-GGGTGAAT 1017
Query 980 TTCTGGGTGGCGGTGCACTGCCACA-GAAACATA-TTCACACACGTGATGGC--GCATCA 1035
|| ||||| ||| | || || || | | ||| || | | || || | ||||| | || |
Sbjct 1018 TT-TGGGTAGCGCTTCATTG-CAGACGCAAC-TACTACTCATACTTAATGGCAAG-AT-A 1072
Query 1036 CCCGAGGGTGAGGAAGTTCTTTCTGAAG-CTGCCGATATCAGTG-AAG-TTTCAGTACTT 1092
|| | | |||||| |||| | ||| || ||||| | |||| || || ||| ||||
Sbjct 1073 TCCTAAGCTGAGGATGTTCATACTG-AGACTGCC-A-ATCACTGCGAGAACTCACTACTC 1129
Query 1093 GCTGCAGGTAGGTGGTT--GGCCTCATGCGG-TGGCT-GTGAAGTACAGTGAAGAAGGGA 1148
| | ||| || | |||| |||| || | || ||| | || ||||| ||| |||||||
Sbjct 1130 GTTCCAGATA-G-GGTTACGGCCGCACG-GGTTGG-TGGTTAAGTATAGTCCTGAAGGGA 1185
Query 1149 AGGTGCTAAAGGTGTTGGAAGATAGCAAAGGGAAAGTGGTGAAG-GCAGTGAGTGAAGTG 1207
|| | | | || ||||||||||| |||||||||| ||| || |||| |||||||||
Sbjct 1186 AGCTTATGCATGTTTTGGAAGATAGTGAAGGGAAAGTTGTG-AGATCAGTAAGTGAAGTG 1244
Query 1208 GAGGAGAAAGATGGGAAGCTTTGGATGGGAAGTGTATTGATGT-CTTTCATTGCCGTGTA 1266
|| || ||||||||||||||||||||||||||||| |||||| |||| |||| || ||
Sbjct 1245 GAAGAAAAAGATGGGAAGCTTTGGATGGGAAGTGTGTTGATGAACTTTG-TTGCTGTCTA 1303
Query 1267 TGAC 1270
||||
Sbjct 1304 TGAC 1307
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 67770735750
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5