BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg470923
Length=3413
Score E
Sequences producing significant alignments: (Bits) Value
AT1G08590.1 | Symbols: | Leucine-rich receptor-like protein ki... 5228 0.0
AT1G08592.1 | Symbols: | Potential natural antisense gene, loc... 2049 0.0
> AT1G08590.1 | Symbols: | Leucine-rich receptor-like protein
kinase family protein | chr1:2718778-2722221 FORWARD LENGTH=3444
Length=3444
Score = 5228 bits (2831), Expect = 0.0
Identities = 3247/3445 (94%), Gaps = 39/3445 (1%)
Strand=Plus/Plus
Query 1 AACTTCGCTTGAGGACCTTCAATCTCAGTTGCACAAAAATGCCATAAAATTAGCCAAAAA 60
||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 1 AACTTCGCTTGGGGACCTTCAATCTCAGTTGCACAAAAATGCCATAAAACTAGCCAAAAA 60
Query 61 GTGAAG-AA-AGAGGAGAAAAATGGCGATCCcttctcaccttttcttcctcttctattac 118
|||||| || |||||||||||||||||||||| || | |||||||||||||||||||||
Sbjct 61 GTGAAGAAATAGAGGAGAAAAATGGCGATCCC-TC-GA-CTTTTCTTCCTCTTCTATTAC 117
Query 119 attggttttgctcttttctcttttgtttcttctGAAACATTTCAAGGTTATGAACAAGAG 178
|||||||| ||||||||| |||||||||||||||||||||||||| | |||||||||
Sbjct 118 ATTGGTTTCGCTCTTTTCCCTTTTGTTTCTTCTGAAACATTTCAAAACTCCGAACAAGAG 177
Query 179 ATCTTGTTGGCCATCAAGTCAGACCTGTTTGATCCTTCAAATAATCTCCAAGATTGGAAG 238
|||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 178 ATCTTGTTGGCCTTCAAGTCAGACCTTTTTGATCCTTCAAATAATCTCCAAGATTGGAAG 237
Query 239 CGACCTGAGAATGCCACAACATTTTCTGAGTTGGTTCATTGTCATTGGACCGGAGTTCAC 298
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 238 AGACCTGAGAATGCCACAACATTTTCTGAGTTGGTTCATTGTCATTGGACAGGAGTTCAC 297
Query 299 TGCGATGCAAATGGCTCTGTGGCTAAGCTTCTTCTCTCCAACATGAATCTCAGCGGAAAC 358
|| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 298 TGTGATGCAAATGGCTATGTGGCTAAGCTTCTTCTCTCCAACATGAATCTCAGCGGAAAC 357
Query 359 GTGTCAAATCAGATTCAGAGCTTCCCTTCTCTGCAAGCCCTTGATCTCAGCAATAACGCA 418
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 358 GTGTCAGATCAGATTCAGAGCTTCCCTTCTCTGCAAGCCCTTGATCTCAGCAATAACGCA 417
Query 419 TTTGAGTCTTCTCTTCCTAAATCTCTTTCTAGTCTCACGTCCTTGAAGGTC-TTCGACGT 477
||||||||||||||||||||||||||||||| ||||||||| ||||||||| || || ||
Sbjct 418 TTTGAGTCTTCTCTTCCTAAATCTCTTTCTAATCTCACGTCTTTGAAGGTCATT-GATGT 476
Query 478 GAGTGTGAACAGCTTCTTTGGAACCTTCCCTTATGGTCTAGGAATGGCCACTGGTCTCAC 537
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||
Sbjct 477 GAGTGTGAACAGCTTCTTTGGAACCTTCCCTTATGGTCTAGGAATGGCAACTGGTCTTAC 536
Query 538 ACACGTCAATGCCTCAAGCAACAATTTTTCTGGGTTTCTCCCTGAAGATCTCAGCAACGC 597
|||||||||||||||||||||||||||||| |||||||| ||||||||||| |||||||
Sbjct 537 ACACGTCAATGCCTCAAGCAACAATTTTTCGGGGTTTCTACCTGAAGATCTTGGCAACGC 596
Query 598 AACTACACTTGAGGTTTTGGACTTTCGAGGAGGTTACTTCGAGGGCTCGGTGCCTTCTTC 657
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 597 AACTACACTTGAGGTTTTGGACTTTCGAGGAGGTTACTTCGAGGGCTCAGTGCCTTCTTC 656
Query 658 CTTCAAGAATCTCAAGAATCTGAAGTTTCTCGGTCTTTCGGGTAATAACTTTGGTGGAAA 717
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 657 TTTCAAGAATCTCAAGAATCTGAAGTTTCTCGGTCTTTCGGGTAACAACTTTGGTGGAAA 716
Query 718 GCTACCAAAGGTGATTGGTGAGCTCTCATCCTTGGAGACCATCATTCTTGGTTACAATGG 777
| |||| |||||||||||||||||||| |||||||||||||| |||||||||||||||||
Sbjct 717 GGTACCGAAGGTGATTGGTGAGCTCTCTTCCTTGGAGACCATTATTCTTGGTTACAATGG 776
Query 778 CTTCACGGGTGAGATTCCAGCAGAGTTTGGGAACCTGACGCACCTTCAGTACCTTGATTT 837
||||| |||||||||||||| |||||||||||| |||||| ||||||||||||||||||
Sbjct 777 CTTCATGGGTGAGATTCCAGAAGAGTTTGGGAAATTGACGCGCCTTCAGTACCTTGATTT 836
Query 838 GGCTGTTGGGAACCTTACGGGCCAGATTCCATCTTCTTTGGGGAAGCTTAAACAGCTTAC 897
||||||||| |||||||| |||||||||||||||||||||||| |||| ||||| |||||
Sbjct 837 GGCTGTTGGAAACCTTACAGGCCAGATTCCATCTTCTTTGGGGCAGCTGAAACAACTTAC 896
Query 898 GACAGTTTACCTCTACCAGAATCGTCTCACGGGGAAGA-TCCCTCGAGAGCTCGGTGATA 956
|||||||| ||||||||||| |||||||| ||||| | | |||||||| || |||| ||
Sbjct 897 AACAGTTTATCTCTACCAGAACCGTCTCACAGGGAA-ACTTCCTCGAGAACTTGGTGGTA 955
Query 957 TGACTTCTCTTGTGTTTCTTGATCTGTCTGATAACCAAATTACAGGACAAATACCTATGG 1016
||||||||||||||||||||||||||||||||||||| || |||||| ||||||||||||
Sbjct 956 TGACTTCTCTTGTGTTTCTTGATCTGTCTGATAACCAGATCACAGGAGAAATACCTATGG 1015
Query 1017 AAGTAGCTGAGTTGAAGAATCTGCAGCTTCTGAATTTGATGAGGAATCAACTCACGGGAA 1076
|||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 1016 AAGTAGGTGAGTTGAAGAATCTGCAGCTTCTAAATTTGATGAGGAATCAACTCACGGGAA 1075
Query 1077 TCATTCCGTCGAAGATTGCTGAGTTACCAAATCTTGAGGTTCTTGAGCTGTGGCAGAACT 1136
|||||||||| || |||||||| |||||||| ||||||||||||||||||||||||||||
Sbjct 1076 TCATTCCGTCAAAAATTGCTGAATTACCAAACCTTGAGGTTCTTGAGCTGTGGCAGAACT 1135
Query 1137 CTCTGATGGGTTCATTACCGGTGCATCTCGGCAAGAATTCCCCATTGAAGTGGTTAGACG 1196
|||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 1136 CTCTCATGGGTTCATTACCGGTGCATCTCGGCAAAAATTCCCCATTGAAGTGGTTAGACG 1195
Query 1197 TCTCATCAAACAAGCTTTCCGGAGAAATACCATCAGGATTGTGCTATTCCAGAAACCTCA 1256
||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||
Sbjct 1196 TCTCATCAAACAAGCTTTCAGGAGATATACCATCAGGATTGTGCTATTCCAGAAACCTCA 1255
Query 1257 CAAAACTCATTCTCTTCGACAACTCATTCTCAGGTCAGATTCCAGAGGAAATTTTCTCAT 1316
|||| |||||||||||| ||||||||||||||||||||||||| |||||||| |||||||
Sbjct 1256 CAAAGCTCATTCTCTTCAACAACTCATTCTCAGGTCAGATTCCGGAGGAAATCTTCTCAT 1315
Query 1317 GTCCGACTTTAGTTCGCGTTCGAATCCAGAAAAATCTCATTTCCGGATCAATACCAGCTG 1376
|||||||||||||||| ||||||||||||||||||| |||||||||||| ||||||||||
Sbjct 1316 GTCCGACTTTAGTTCGTGTTCGAATCCAGAAAAATCACATTTCCGGATCTATACCAGCTG 1375
Query 1377 GTTCAGGTGACTTACCAATGCTTCAGCATCTAGAACTCGCAAAAAACAACCTCACCGGTA 1436
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 1376 GTTCAGGTGACTTACCAATGCTTCAGCATCTAGAGCTCGCAAAAAACAACCTCACCGGTA 1435
Query 1437 AAATTCCAGATGATATAGCCTTATCTACATCACTCTCATTCATAGACATATCATATAATC 1496
||||||||||||||||||||||||| |||||||||||||| ||||||||||||| |||||
Sbjct 1436 AAATTCCAGATGATATAGCCTTATCCACATCACTCTCATTTATAGACATATCATTTAATC 1495
Query 1497 ACCTCTCATCCCTATCTTCCTCCATTTTCTCAAGTCCTAACCTTCAAACCTTCATCGCCT 1556
| |||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||
Sbjct 1496 ATCTCTCATCCCTATCTTCCTCCATTTTCTCAAGTCCTAATCTTCAAACCTTCATTGCCT 1555
Query 1557 CACATAACAACTTTGCCGGAAAAATACCTAACCAGATTCAAGATCGTCCATCTTTGTCTG 1616
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 1556 CACATAACAACTTTGCCGGAAAAATTCCTAACCAGATTCAAGATCGTCCATCTTTGTCTG 1615
Query 1617 TCCTCGATCTTTCCTTCAACCATTTCTCAGGTGAAATCCCAGAAAGGATTGCTTCTTTTG 1676
||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||
Sbjct 1616 TCCTCGATCTTTCCTTCAACCATTTCTCAGGTGGAATCCCAGAAAGGATCGCTTCTTTTG 1675
Query 1677 AAAAACTTGTGAGTCTAAATCTCAAGAGCAACCAATTGGTTGGAAAAATCCCTGAGGCAT 1736
|||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||
Sbjct 1676 AAAAACTTGTGAGTCTAAATCTCAAGAGCAACCAATTGGTTGGAGAAATCCCTAAGGCAT 1735
Query 1737 TAGCTGGGATGCACATGTTAGCTGTTCTTGACCTCTCAAACAACTCTTTAACGGGGAATA 1796
|||| |||||||||||||||||||||||||| ||||||||||||||||| ||||||||||
Sbjct 1736 TAGCCGGGATGCACATGTTAGCTGTTCTTGATCTCTCAAACAACTCTTTGACGGGGAATA 1795
Query 1797 TACCAGTGAACTTGGGAGCTTCCCCAACACTGGAGATGCTAAACGTGTCATTCAACAAAC 1856
|||||| | ||||||||||||| ||||||||||||||| |||||||||||||||||||||
Sbjct 1796 TACCAGCGGACTTGGGAGCTTCTCCAACACTGGAGATGTTAAACGTGTCATTCAACAAAC 1855
Query 1857 TC-ACAGGACCTGTTCCTTCAAACATGTTGTTTGCAGCCATAAACCCAAAAGACCTCATG 1915
|| || ||||| |||||||||||||| |||||||||||||| |||||||||||||| ||
Sbjct 1856 TCGAC-GGACCCATTCCTTCAAACATGCTGTTTGCAGCCATAGACCCAAAAGACCTCGTG 1914
Query 1916 GGAAACGATGGCTTATGCGGTGGAGTTCTATCACCTTGCCCTAAGAGCCTAGCTTTGTCA 1975
|||||| ||||||||||||||||||||||| |||||||| ||||||||||||||||||||
Sbjct 1915 GGAAACAATGGCTTATGCGGTGGAGTTCTACCACCTTGCTCTAAGAGCCTAGCTTTGTCA 1974
Query 1976 GCAAAAGGCAGAAATCCAGGGAGAATTCACGTGAATCATGCAATCTTCGGGTTCATTGTT 2035
||||||||| |||||||||||||||||||||||||||| ||| |||||||||||||||||
Sbjct 1975 GCAAAAGGCCGAAATCCAGGGAGAATTCACGTGAATCACGCAGTCTTCGGGTTCATTGTT 2034
Query 2036 GGAACTTCAGTCATCGTATCTCTGGGAATGATGTTCTTGGCAGGGAGATGGGTATACACA 2095
||||||||||||||||| || |||| |||||||||||||||||||||||| ||||||||
Sbjct 2035 GGAACTTCAGTCATCGTGGCTATGGGGATGATGTTCTTGGCAGGGAGATGGATATACACA 2094
Query 2096 AGATGGGATCTTTACAGCAACTTTGCCAAAGAGTATTTATTCTGCAAGAAACCTCGGGAG 2155
|||||||||||||||||||||||||| | ||||||| |||||||||||||||||||||||
Sbjct 2095 AGATGGGATCTTTACAGCAACTTTGCTAGAGAGTATATATTCTGCAAGAAACCTCGGGAG 2154
Query 2156 GAGTGGCCATGGAGACTCGTGGCTTTCCAGAGACTGTGTTTCACTGCAGGAGACATCTTA 2215
|| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 2155 GAATGGCCATGGAGACTCGTGGCTTTCCAGAGACTGTGCTTCACTGCAGGAGACATCTTA 2214
Query 2216 TCACATATCAAAGAATCAAACATCATTGGAATGGGAGCCATGGGGATCGTTTACAAAGCA 2275
||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||
Sbjct 2215 TCACATATCAAAGAATCAAACATCATTGGAATGGGAGCCATAGGGATTGTTTACAAAGCA 2274
Query 2276 GAAGTCATGAGACGGCCATTACTCACAGTAGCTGTGAAAAAACTGTGGAGATCACCATCA 2335
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 2275 GAAGTCATGAGACGGCCATTACTCACTGTAGCTGTGAAAAAACTGTGGAGATCACCATCA 2334
Query 2336 CCACAGAATGATATCGAAGATCATCATCAAGAAGAAGAAGAAGAGGACGACATACTCAGA 2395
||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 2335 CCACAAAATGATATCGAAGATCATCATCAAGAAGAAGATGAAGAGGACGACATACTCAGA 2394
Query 2396 GAAGTGAACCTACTTGGTGGTCTCCGACATAGAAACATTGTGAAGATTCTAGGTTACATT 2455
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||
Sbjct 2395 GAAGTGAACCTACTTGGTGGTCTACGACATAGAAACATTGTGAAGATTCTAGGTTACGTT 2454
Query 2456 CACAACGAGAGAGAAGTGATGATGGTATACGAGTACATGCCCAATGGAAACCTAGGAACT 2515
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2455 CACAACGAGAGAGAAGTGATGATGGTATACGAGTACATGCCCAATGGAAACCTAGGAACT 2514
Query 2516 GCTTTGCATTCCAAAGATGAGAAATTCTTACTAAGAGATTGGCTCTCACGATACAATGTC 2575
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2515 GCTTTGCATTCCAAAGATGAGAAATTCTTACTAAGAGATTGGCTCTCACGATACAATGTC 2574
Query 2576 GCCGTCGGAGTCGTTCAAGGTCTCAATTACTTGCACAACGATTGCTATCCGCCGATCATT 2635
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 2575 GCCGTCGGAGTCGTTCAAGGTCTCAATTACTTGCACAACGATTGCTATCCTCCGATCATT 2634
Query 2636 CACAGAGACATCAAATCTAACAACATTCTCCTCGATTCAAACCTCGAAGCGAGGATAGCT 2695
|||||||||||||| ||||| ||||| ||||||||||||||||| ||||||||||||||
Sbjct 2635 CACAGAGACATCAAGTCTAATAACATCCTCCTCGATTCAAACCTTGAAGCGAGGATAGCA 2694
Query 2696 GATTTCGGATTGGCGAAGATGATGCTTCATAAGAACGAGACTGTTTCTATGGTGGCTGGA 2755
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 2695 GATTTCGGATTGGCGAAGATGATGCTTCATAAGAACGAGACCGTTTCTATGGTGGCTGGA 2754
Query 2756 TCTTACGGGTATATAGCGCCGGAGTACGGATACACACTGAAGATTGACGAGAAGAGCGAT 2815
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||
Sbjct 2755 TCTTACGGGTATATAGCGCCGGAGTACGGATACACACTGAAGATTGACGAAAAGAGTGAT 2814
Query 2816 ATATACAGTTTAGGCGTTGTGCTTCTGGAATTGGTGACTGGGAAAATGCCGATAGATCCT 2875
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2815 ATATACAGTCTAGGCGTTGTGCTTCTGGAATTGGTGACTGGGAAAATGCCGATAGATCCT 2874
Query 2876 TCGTTTGAGGAATCGATTGACGTAGTTGAGTGGATTCGGAGGAAGGTGAAGAAGAACGAG 2935
||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 2875 TCGTTTGAGGATTCGATTGACGTGGTTGAGTGGATTCGGAGGAAGGTGAAGAAGAACGAG 2934
Query 2936 AGCTTGGAAGAAGTGATTGATGCGAGCATCGCCGGAGATTGTAAACACGTGATCGAAGAA 2995
||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||
Sbjct 2935 AGCTTGGAAGAAGTGATCGACGCGAGCATCGCCGGAGATTGTAAACACGTGATCGAAGAG 2994
Query 2996 ATGCTTCTGGCACTGCGAATCGCTCTTCTCTGCACTGCGAAGCTCCCGAAGGATAGGCCA 3055
||||| ||||||||||||||||||||||||||||| |||||||| ||||||||||| |||
Sbjct 2995 ATGCTCCTGGCACTGCGAATCGCTCTTCTCTGCACCGCGAAGCTACCGAAGGATAGACCA 3054
Query 3056 TCGATTAGAGATGTCATCACGATGCTTGCGGAGGCGAAGCCACGCCGGAAAAGTGTTTGC 3115
||||||||||| |||||||| ||||| |||||||||||||||||||||||||||||||||
Sbjct 3055 TCGATTAGAGACGTCATCACAATGCTCGCGGAGGCGAAGCCACGCCGGAAAAGTGTTTGC 3114
Query 3116 CAAGTCGCCGGAGATTTGCCGATTTTCAGAAACTCGCCAGTGGTAGGGCTGATTTAGATG 3175
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3115 CAAGTCGCCGGGGATTTGCCGATTTTCAGAAACTCGCCAGTGGTAGGGCTGATTTAGATG 3174
Query 3176 ACGGAGGCGATAAGGGTATTTTTGGCATTTCAGCAGCTGGG---AA------CA------ 3220
|||||||||||||||||| ||||| ||||||| |||||||| || ||
Sbjct 3175 ACGGAGGCGATAAGGGTAGTTTTGTCATTTCATCAGCTGGGGCTAATTTTAACATTGGGC 3234
Query 3221 -A----GTTAACCTTGGACTGAATCAACAACCCATGTTTTCAAATCTGATCAGTGCACTA 3275
| |||||| |||| ||||||||| |||||||||||||||||||||| ||||||||
Sbjct 3235 TAACAAGTTAACTTTGGGCTGAATCAAAAACCCATGTTTTCAAATCTGATGGGTGCACTA 3294
Query 3276 A-GCC-ATTGAACCGAATGACATGATTCAAAATTGTAATAGGTCCCTTGTTCGATGGCTG 3333
| ||| |||||||| ||||||||||||||||||||||||||| |||||||| ||||||||
Sbjct 3295 AAGCCCATTGAACCAAATGACATGATTCAAAATTGTAATAGGCCCCTTGTT-GATGGCTG 3353
Query 3334 ATCCTGCAAATTGTAGTTACCGGAGGCTAAACAAGTAATAAATAAAGATTTTAAATAA-- 3391
|||| |||||||||||||||| ||||||||| || ||||||||||||||||||| ||
Sbjct 3354 ATCCAGCAAATTGTAGTTACCAGAGGCTAAAAAAATAATAAATAAAGATTTTAATTAGTT 3413
Query 3392 --GTTA-AATGGGATATTAATCTTT 3413
||| ||||| ||||||||||||
Sbjct 3414 TTGTTTTAATGGAATATTAATCTTT 3438
> AT1G08592.1 | Symbols: | Potential natural antisense gene, locus
overlaps with AT1G08590 | chr1:2718875-2721676 REVERSE
LENGTH=1614
Length=1614
Score = 2049 bits (1109), Expect = 0.0
Identities = 1257/1330 (95%), Gaps = 4/1330 (0%)
Strand=Plus/Minus
Query 99 ttttcttcctcttctattacattggttttgctcttttctcttttgtttcttctGAAACAT 158
|||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||
Sbjct 1614 TTTTCTTCCTCTTCTATTACATTGGTTTCGCTCTTTTCCCTTTTGTTTCTTCTGAAACAT 1555
Query 159 TTCAAGGTTATGAACAAGAGATCTTGTTGGCCATCAAGTCAGACCTGTTTGATCCTTCAA 218
||||| | ||||||||||||||||||||| ||||||||||||| |||||||||||||
Sbjct 1554 TTCAAAACTCCGAACAAGAGATCTTGTTGGCCTTCAAGTCAGACCTTTTTGATCCTTCAA 1495
Query 219 ATAATCTCCAAGATTGGAAGCGACCTGAGAATGCCACAACATTTTCTGAGTTGGTTCATT 278
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 1494 ATAATCTCCAAGATTGGAAGAGACCTGAGAATGCCACAACATTTTCTGAGTTGGTTCATT 1435
Query 279 GTCATTGGACCGGAGTTCACTGCGATGCAAATGGCTCTGTGGCTAAGCTTCTTCTCTCCA 338
|||||||||| ||||||||||| ||||||||||||| |||||||||||||||||||||||
Sbjct 1434 GTCATTGGACAGGAGTTCACTGTGATGCAAATGGCTATGTGGCTAAGCTTCTTCTCTCCA 1375
Query 339 ACATGAATCTCAGCGGAAACGTGTCAAATCAGATTCAGAGCTTCCCTTCTCTGCAAGCCC 398
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 1374 ACATGAATCTCAGCGGAAACGTGTCAGATCAGATTCAGAGCTTCCCTTCTCTGCAAGCCC 1315
Query 399 TTGATCTCAGCAATAACGCATTTGAGTCTTCTCTTCCTAAATCTCTTTCTAGTCTCACGT 458
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 1314 TTGATCTCAGCAATAACGCATTTGAGTCTTCTCTTCCTAAATCTCTTTCTAATCTCACGT 1255
Query 459 CCTTGAAGGTC-TTCGACGTGAGTGTGAACAGCTTCTTTGGAACCTTCCCTTATGGTCTA 517
| ||||||||| || || ||||||||||||||||||||||||||||||||||||||||||
Sbjct 1254 CTTTGAAGGTCATT-GATGTGAGTGTGAACAGCTTCTTTGGAACCTTCCCTTATGGTCTA 1196
Query 518 GGAATGGCCACTGGTCTCACACACGTCAATGCCTCAAGCAACAATTTTTCTGGGTTTCTC 577
|||||||| |||||||| |||||||||||||||||||||||||||||||| ||||||||
Sbjct 1195 GGAATGGCAACTGGTCTTACACACGTCAATGCCTCAAGCAACAATTTTTCGGGGTTTCTA 1136
Query 578 CCTGAAGATCTCAGCAACGCAACTACACTTGAGGTTTTGGACTTTCGAGGAGGTTACTTC 637
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1135 CCTGAAGATCTTGGCAACGCAACTACACTTGAGGTTTTGGACTTTCGAGGAGGTTACTTC 1076
Query 638 GAGGGCTCGGTGCCTTCTTCCTTCAAGAATCTCAAGAATCTGAAGTTTCTCGGTCTTTCG 697
|||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 1075 GAGGGCTCAGTGCCTTCTTCTTTCAAGAATCTCAAGAATCTGAAGTTTCTCGGTCTTTCG 1016
Query 698 GGTAATAACTTTGGTGGAAAGCTACCAAAGGTGATTGGTGAGCTCTCATCCTTGGAGACC 757
||||| ||||||||||||||| |||| |||||||||||||||||||| ||||||||||||
Sbjct 1015 GGTAACAACTTTGGTGGAAAGGTACCGAAGGTGATTGGTGAGCTCTCTTCCTTGGAGACC 956
Query 758 ATCATTCTTGGTTACAATGGCTTCACGGGTGAGATTCCAGCAGAGTTTGGGAACCTGACG 817
|| |||||||||||||||||||||| |||||||||||||| |||||||||||| |||||
Sbjct 955 ATTATTCTTGGTTACAATGGCTTCATGGGTGAGATTCCAGAAGAGTTTGGGAAATTGACG 896
Query 818 CACCTTCAGTACCTTGATTTGGCTGTTGGGAACCTTACGGGCCAGATTCCATCTTCTTTG 877
| ||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||
Sbjct 895 CGCCTTCAGTACCTTGATTTGGCTGTTGGAAACCTTACAGGCCAGATTCCATCTTCTTTG 836
Query 878 GGGAAGCTTAAACAGCTTACGACAGTTTACCTCTACCAGAATCGTCTCACGGGGAAGA-T 936
||| |||| ||||| ||||| |||||||| ||||||||||| |||||||| ||||| | |
Sbjct 835 GGGCAGCTGAAACAACTTACAACAGTTTATCTCTACCAGAACCGTCTCACAGGGAA-ACT 777
Query 937 CCCTCGAGAGCTCGGTGATATGACTTCTCTTGTGTTTCTTGATCTGTCTGATAACCAAAT 996
|||||||| || |||| ||||||||||||||||||||||||||||||||||||||| ||
Sbjct 776 TCCTCGAGAACTTGGTGGTATGACTTCTCTTGTGTTTCTTGATCTGTCTGATAACCAGAT 717
Query 997 TACAGGACAAATACCTATGGAAGTAGCTGAGTTGAAGAATCTGCAGCTTCTGAATTTGAT 1056
|||||| |||||||||||||||||| |||||||||||||||||||||||| ||||||||
Sbjct 716 CACAGGAGAAATACCTATGGAAGTAGGTGAGTTGAAGAATCTGCAGCTTCTAAATTTGAT 657
Query 1057 GAGGAATCAACTCACGGGAATCATTCCGTCGAAGATTGCTGAGTTACCAAATCTTGAGGT 1116
|||||||||||||||||||||||||||||| || |||||||| |||||||| ||||||||
Sbjct 656 GAGGAATCAACTCACGGGAATCATTCCGTCAAAAATTGCTGAATTACCAAACCTTGAGGT 597
Query 1117 TCTTGAGCTGTGGCAGAACTCTCTGATGGGTTCATTACCGGTGCATCTCGGCAAGAATTC 1176
|||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||
Sbjct 596 TCTTGAGCTGTGGCAGAACTCTCTCATGGGTTCATTACCGGTGCATCTCGGCAAAAATTC 537
Query 1177 CCCATTGAAGTGGTTAGACGTCTCATCAAACAAGCTTTCCGGAGAAATACCATCAGGATT 1236
||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||
Sbjct 536 CCCATTGAAGTGGTTAGACGTCTCATCAAACAAGCTTTCAGGAGATATACCATCAGGATT 477
Query 1237 GTGCTATTCCAGAAACCTCACAAAACTCATTCTCTTCGACAACTCATTCTCAGGTCAGAT 1296
|||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||
Sbjct 476 GTGCTATTCCAGAAACCTCACAAAGCTCATTCTCTTCAACAACTCATTCTCAGGTCAGAT 417
Query 1297 TCCAGAGGAAATTTTCTCATGTCCGACTTTAGTTCGCGTTCGAATCCAGAAAAATCTCAT 1356
||| |||||||| ||||||||||||||||||||||| ||||||||||||||||||| |||
Sbjct 416 TCCGGAGGAAATCTTCTCATGTCCGACTTTAGTTCGTGTTCGAATCCAGAAAAATCACAT 357
Query 1357 TTCCGGATCAATACCAGCTGGTTCAGGTGACTTACCAATGCTTCAGCATCTAGAACTCGC 1416
||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 356 TTCCGGATCTATACCAGCTGGTTCAGGTGACTTACCAATGCTTCAGCATCTAGAGCTCGC 297
Query 1417 AAAAAACAAC 1426
||||||||||
Sbjct 296 AAAAAACAAC 287
Score = 473 bits (256), Expect = 4e-132
Identities = 278/289 (96%), Gaps = 0/289 (0%)
Strand=Plus/Minus
Query 2610 ACAACGATTGCTATCCGCCGATCATTCACAGAGACATCAAATCTAACAACATTCTCCTCG 2669
|||||||||||||||| ||||||||||||||||||||||| ||||| ||||| |||||||
Sbjct 291 ACAACGATTGCTATCCTCCGATCATTCACAGAGACATCAAGTCTAATAACATCCTCCTCG 232
Query 2670 ATTCAAACCTCGAAGCGAGGATAGCTGATTTCGGATTGGCGAAGATGATGCTTCATAAGA 2729
|||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 231 ATTCAAACCTTGAAGCGAGGATAGCAGATTTCGGATTGGCGAAGATGATGCTTCATAAGA 172
Query 2730 ACGAGACTGTTTCTATGGTGGCTGGATCTTACGGGTATATAGCGCCGGAGTACGGATACA 2789
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 171 ACGAGACCGTTTCTATGGTGGCTGGATCTTACGGGTATATAGCGCCGGAGTACGGATACA 112
Query 2790 CACTGAAGATTGACGAGAAGAGCGATATATACAGTTTAGGCGTTGTGCTTCTGGAATTGG 2849
|||||||||||||||| ||||| |||||||||||| ||||||||||||||||||||||||
Sbjct 111 CACTGAAGATTGACGAAAAGAGTGATATATACAGTCTAGGCGTTGTGCTTCTGGAATTGG 52
Query 2850 TGACTGGGAAAATGCCGATAGATCCTTCGTTTGAGGAATCGATTGACGT 2898
||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 51 TGACTGGGAAAATGCCGATAGATCCTTCGTTTGAGGATTCGATTGACGT 3
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 169865268998
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5