BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg471074 Length=3182 Score E Sequences producing significant alignments: (Bits) Value AT1G09730.1 | Symbols: | Cysteine proteinases superfamily prot... 3051 0.0 > AT1G09730.1 | Symbols: | Cysteine proteinases superfamily protein | chr1:3147667-3154380 REVERSE LENGTH=3386 Length=3386 Score = 3051 bits (1652), Expect = 0.0 Identities = 1972/2116 (93%), Gaps = 64/2116 (3%) Strand=Plus/Plus Query 1078 GACATTGAGGAGTTAAAGATTGCAGTAAAAGAACATAATTGGCCTGAGAAGCAACAAAAG 1137 ||||| ||||||||||||||||| ||||||||||||||||||||| | |||||||||||| Sbjct 1201 GACATGGAGGAGTTAAAGATTGCGGTAAAAGAACATAATTGGCCTAATAAGCAACAAAAG 1260 Query 1138 ATAAACTCCCTGCATGTGAAATACCCGGCTGTGTGGAATGCTGACCTCGAGGGTGACGTG 1197 |||||||| |||||||||||||||||||||||||||||| |||||||||||| ||||||| Sbjct 1261 ATAAACTCGCTGCATGTGAAATACCCGGCTGTGTGGAATACTGACCTCGAGGATGACGTG 1320 Query 1198 GAAGTATCAGGGTATAACTTGAATCAACAGAAGCGTTACTTTCCAAGCTTTGATGAACCT 1257 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 1321 GAAGTATCAGGGTATAACTTGAATCAACAGAAGCGTTATTTTCCAAGCTTTGATGAACCT 1380 Query 1258 TTTGAGGATGTTGTCTATCCGAAA-GGAGACCCAGATGCTGTTTCCATTTGCAAAAGAGA 1316 |||||||||||||||||||| ||| || |||||||||||||||||||||||||||||||| Sbjct 1381 TTTGAGGATGTTGTCTATCC-AAAGGGTGACCCAGATGCTGTTTCCATTTGCAAAAGAGA 1439 Query 1317 TGTTGAGCTCTTGCAGCCAGAGACATTTGTGAATGACACAATCATTGACTTCTATATTAA 1376 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 1440 TGTTGAGCTCTTGCAGCCAGAGACATTTGTAAATGACACAATCATTGACTTCTATATTAA 1499 Query 1377 TTATTTAAAGAATCAGATTCAAACGGAGGAAAAACATAGATTCCATTTCTTTAACAGCTT 1436 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1500 TTATTTGAAGAATCAGATTCAAACGGAGGAAAAACATAGATTCCATTTCTTTAACAGCTT 1559 Query 1437 TTTCTTCCGGAAACTTGCTGATCTCGACAAAGATCCATCAAGTATAGCTGATGGAAAGGC 1496 ||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||| Sbjct 1560 TTTCTTCCGGAAACTCGCTGATCTTGACAAAGATCCATCAAGTATAGCTGATGGAAAGGC 1619 Query 1497 TGCTTTCCTACGTGTCCGTAAGTGGACAAGGAAGGTGGACATGTTTGGAAAGGACTACAT 1556 |||||| ||||||||||| |||||||||||||| |||||||||||||||||||||||||| Sbjct 1620 TGCTTTTCTACGTGTCCGAAAGTGGACAAGGAAAGTGGACATGTTTGGAAAGGACTACAT 1679 Query 1557 TTTCGTGCCGGTGAACTTCAACCTTCACTGGAGTTTAATAGTCATATGTCACCCTGGTGA 1616 ||| ||||| ||||||| |||||||||||||||||||||||||||||| ||||||||||| Sbjct 1680 TTTTGTGCCTGTGAACTACAACCTTCACTGGAGTTTAATAGTCATATGCCACCCTGGTGA 1739 Query 1617 AGTGGCTAATCGTACAGATCTAGACTTGGATGACTCGAAAAAAGTACCGTGCATATTACA 1676 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 1740 AGTGGCTAATCGTACAGATCTAGACTTGGATGACTCAAAAAAAGTACCGTGCATATTACA 1799 Query 1677 TATGGATTCTATAAAAGGGAGCCATGCAGGGCTTAAAAATCTAGTCCAAAGTTACTTGTG 1736 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 1800 TATGGATTCTATAAAAGGGAGCCATGCAGGGCTTAAAAATCTAGTCCAAACTTACTTGTG 1859 Query 1737 CGAGGAGTGGAAGGAGAGGCATAAAGAGACATCGGATGATATTTCTTCCAGATTCATGAA 1796 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1860 CGAGGAGTGGAAGGAGAGGCATAAAGAGACATCGGATGATATTTCTTCCAGATTCATGAA 1919 Query 1797 TTTGCGGTTTGTCTCACTTGAGTTGCCACAGCAGGAAAACTCATTTGACTGTGGCCTCTT 1856 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1920 TTTGCGGTTTGTCTCACTTGAGTTGCCACAGCAGGAAAACTCATTTGACTGTGGCCTCTT 1979 Query 1857 TCTGCTGCACTATCTAGAGCTATTTCTTGCTGAAGCTCCCCTTAATTTTAATCCTTTCAA 1916 ||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||| Sbjct 1980 TCTGCTGCACTATCTGGAGCTATTTCTTGCTGAAGCTCCCCTTAATTTTAGTCCTTTCAA 2039 Query 1917 GATATATAATGCTTCCAACTTTCTTTATCTGAACTGGTTTCCTCCTGCCGAGGCATCATT 1976 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2040 GATATATAATGCTTCCAACTTTCTTTATCTGAACTGGTTTCCTCCTGCCGAGGCATCATT 2099 Query 1977 GAAGCGTACTCTAATTCAGAAGTTAATTTTTGAACTCCTTGAAAACCGGTCACGGGAAGT 2036 |||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 2100 GAAGCGTACTCTGATTCAGAAGTTAATATTTGAACTCCTTGAAAACCGGTCACGGGAAGT 2159 Query 2037 TAGTAATGAACAGAACCAGTCCTGCGAAAGTCCAGTTGCCGTCAATGACAATACGGGCAT 2096 |||||||||||| ||||||||||| |||||||||||||||||||||||| ||| |||||| Sbjct 2160 TAGTAATGAACAAAACCAGTCCTGTGAAAGTCCAGTTGCCGTCAATGACGATATGGGCAT 2219 Query 2097 TGAGGTTCTCTCTGAGAGATGCAGCCCCCTGATAGACTGTAACGGGAATATGACACAGAC 2156 |||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||| Sbjct 2220 TGAGGTTCTCTCTGAGAGATGCAGCCCCCTAATAGACTGTAACGGGGATATGACACAGAC 2279 Query 2157 GCAAGATGATCAAGGAATCGAAATGACTTTGCTTGAAAGATCTTCCATGAGGAACATACA 2216 |||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct 2280 GCAAGACGATCAAGGAATCGAAATGACTTTGCTTGAAAGATCTTCCATGAGGCACATACA 2339 Query 2217 AGCTGCTAATGATTCGGGTATGGTACTAAGAGATTTATTCGATTCTGGAGCCAACAACAC 2276 ||||||||||||||||||||||||||||||||||||||||||||| ||| |||| ||||| Sbjct 2340 AGCTGCTAATGATTCGGGTATGGTACTAAGAGATTTATTCGATTCAGGATCCAATAACAC 2399 Query 2277 AGGATCATTACTTGTACAACTACAAGAACCATTCGAGGAACCATCTTCGTTTTATCATCT 2336 |||||||||||||| |||||||||| ||||||||||||| || ||||||||||||||||| Sbjct 2400 AGGATCATTACTTGAACAACTACAACAACCATTCGAGGATCCGTCTTCGTTTTATCATCT 2459 Query 2337 TAGTAACGACTCGTTGGCAAGAGAGCAAGTGGACATGGAAACTGGTGAACAATTTATGTG 2396 |||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||| Sbjct 2460 TAGTAACGACTCGTCGGCAAGAGAGCAAGTGGACATGGAAACTGGTGAACAGTTTATGTG 2519 Query 2397 TTTGAACGCTGGAGAGGGCAACTTTCAATGCATCACTGAAACTGCCTCTCCGAGAGCATC 2456 |||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||| Sbjct 2520 TTTGAACGCTGGAGAGGGCAACTTTCAATGCATCACGGAAACTACCTCTCCGAGAGCATC 2579 Query 2457 TAATTCATTCACTTCATGGAACCTTGGTATTCCCCTGGTGCAGAAGGAAGATGAGACTGA 2516 |||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 2580 TAATTCATTCTCTTCATGGAACCTTGGTATTCCCCTGGTGCAGAAGGAAGACGAGACTGA 2639 Query 2517 TTTGTTATCTGAAACTTCGAAAAGCACTTCTAATGATTCAGAAGATATCGGTATCATAGA 2576 ||||||||||||||||||||| || ||||||||||||| | | |||||||||||| Sbjct 2640 TTTGTTATCTGAAACTTCGAATAG---TTCTAATGATTCA-A---T--CGGTATCATAGA 2690 Query 2577 AGACAACCAAATAGAAAATACTCATGAAGGAGAAATCGGCGAGAGTCCTCCAAGAGAGAC 2636 |||||||| |||||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct 2691 AGACAACCCAATAGAAAATACTCATGAAGAAGAAATCGACGAGAGTCCTCCAAGAGAGAC 2750 Query 2637 CGTCTCTTTAATATCTGCTACAGTGGGTTCTAACACTG---ACCATAACACTGAGAATGA 2693 ||||||||||| |||||| || |||||||||||||||| |||||| |||||||||||| Sbjct 2751 CGTCTCTTTAAAATCTGCAACCGTGGGTTCTAACACTGCTGACCATACCACTGAGAATGA 2810 Query 2694 AGAGCTCGTTTCTACTCATGTTGAGCTTGTTGTTCCATCGAGTCAAGA-TGACGGAGATG 2752 ||||| ||||||||| || ||||||||||||||||||||||||| || |||| |||||| Sbjct 2811 AGAGCCCGTTTCTACACACATTGAGCTTGTTGTTCCATCGAGTCA-GAATGACAGAGATG 2869 Query 2753 AGGAGAAGCCAGTGGAGCATGATCCTGAAATTGGGGACAAGGCGAGTGAAGATGATGGAG 2812 ||||||||||| |||||||||||| |||||||||||||||| |||||||||||| ||||| Sbjct 2870 AGGAGAAGCCATTGGAGCATGATCTTGAAATTGGGGACAAGACGAGTGAAGATGTTGGAG 2929 Query 2813 ATGAGTGTGATCAGAAGGAGCCAATGGAGGAAGAAGAGGAGAAGCGAGCTGCAAAACGGC 2872 |||| |||||||| |||||||||||||| |||||||| |||||||||||||||||||||| Sbjct 2930 ATGATTGTGATCAAAAGGAGCCAATGGAAGAAGAAGATGAGAAGCGAGCTGCAAAACGGC 2989 Query 2873 CAAGGCTGTCATCTTCCACTGACGAAGCTGAGGAGA---A-A--TAGAGATTGGGTGG-C 2925 | ||||| |||||| |||||| |||||||||||||| | | ||||||||| |||| | Sbjct 2990 CGAGGCTATCATCTCCCACTGGCGAAGCTGAGGAGATGGAGAAATAGAGATTGTGTGGGC 3049 Query 2926 TATCAACGAACACACCACGGGTTTTGTGTTGGGGTCTTGGATGGTTAGAC---TTAGAGT 2982 ||| | | ||||||||||||||||||||||||| |||||||||||||||| |||||| Sbjct 3050 TAT-ATC-AACACACCACGGGTTTTGTGTTGGG-TCTTGGATGGTTAGACGACTTAGAGG 3106 Query 2983 ATTTATATCAAACCAACACCTTTAGGACGTGTTTATATCGTTGTAGGAGTTTTTTA--A- 3039 |||||||||||||| | | ||||||| ||||||||| |||||||||||| ||||| | Sbjct 3107 GTTTATATCAAACCA-C-C-TTTAGGAAGTGTTTATAACGTTGTAGGAGTATTTTACGAA 3163 Query 3040 GAA---G-AAA-AAt----t-ttt--t--t-------GTAAAATTTCGATACGTTAACTT 3078 ||| | ||| ||| | ||| | | ||||||||||||||||||||||| Sbjct 3164 GAAAAAGGAAAGAATAACGTCTTTCATCGTTTTTTATGTAAAATTTCGATACGTTAACTT 3223 Query 3079 A-G-GG-TTGATGAATATATTTAGCC-ATTTTGTGGTTTT-ATTTGAGGTTCTTCCGAGT 3133 | | || ||||||||||||| |||| ||||||||||||| ||||||||||||||||||| Sbjct 3224 AAGAGGGTTGATGAATATAT--AGCCCATTTTGTGGTTTTTATTTGAGGTTCTTCCGAGT 3281 Query 3134 AATTTTT-ACGTATAT 3148 ||||||| || ||||| Sbjct 3282 AATTTTTTACATATAT 3297 Score = 952 bits (515), Expect = 0.0 Identities = 619/669 (93%), Gaps = 8/669 (1%) Strand=Plus/Plus Query 1 ATGAAGAAAAACATGGAAGTCTTCGATTTCAACGAAGAGGACGAGCTCCCTGAGCCTGCA 60 |||||||||||| | ||||| ||||||||||| ||||||||||||||| ||||| ||||| Sbjct 145 ATGAAGAAAAACTTTGAAGTATTCGATTTCAAAGAAGAGGACGAGCTCGCTGAGTCTGCA 204 Query 61 GCTGGAAAGTTATTGGAAAAATTCACAAACCCTAGTCCTTGCAATTCTCCGGTTCTGCAA 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 205 GCTGGAAAGTTATTGGAAAAATTCACAAACCCTAGTCCTTGCAATTCTCCGGTTCTGCAA 264 Query 121 CGCCAACGCATCCACAGCTTCTGCAATGAAAAAAGTGATCA-GAAGGAAGAAATGGAAGG 179 |||||||||||||| |||||||||||||||||| ||| | | ||| |||||||||||||| Sbjct 265 CGCCAACGCATCCAAAGCTTCTGCAATGAAAAACGTGTTGAGGAA-GAAGAAATGGAAGG 323 Query 180 TCCAAGTTGTGCAGAGCCTGCTACTGCTGTAGAGT-TAGACGATCGTCAATGTGAAGATG 238 ||||||||||||||||||||||||||||||||||| | ||||||| |||||||||||||| Sbjct 324 TCCAAGTTGTGCAGAGCCTGCTACTGCTGTAGAGTCT-GACGATCATCAATGTGAAGATG 382 Query 239 CTCCGACTTTTGTAACAGAAGCTGAGGAGTCCAGAACGAGTCTCACATTTCGG-TTGGAA 297 | ||||||| |||||||||||| ||||||||||||||| |||||||||| || |||||| Sbjct 383 ATTCGACTTTGGTAACAGAAGCTAAGGAGTCCAGAACGATTCTCACATTT-GGTTTGGAA 441 Query 298 ACCAGTGACCATTTAAAAGAAACAGATGCCGATCACGTTAATCATGGATTGATGTTTGGT 357 |||| |||||||||| ||||||||||||| || ||||||||||| ||||||||||| ||| Sbjct 442 ACCACTGACCATTTAGAAGAAACAGATGCAGAGCACGTTAATCAGGGATTGATGTTAGGT 501 Query 358 TTGAATACTGAAGACCTGGCAAAGGAAACAGATGA-AGATCAAGATAACCATGGATTGAT 416 || || ||||||||||||||||||||||||||| | |||||| ||||||||||||||||| Sbjct 502 TTAAAAACTGAAGACCTGGCAAAGGAAACAGAT-ATAGATCACGATAACCATGGATTGAT 560 Query 417 GTTTGGTTTGAATACCGAAGACCACATAGAAGAAACTGATGTAGATCATGGATTAGAAAG 476 |||||||||||||| ||||||| ||||||||||||| ||||| |||||| || | || || Sbjct 561 GTTTGGTTTGAATAGCGAAGACGACATAGAAGAAACAGATGTGGATCATAGAGTGGAGAG 620 Query 477 TTTCTCTTGCGAGCCAGGCAGAAGTAGTTTTTACGCTGAAACTTCGTCATATAGTCAACG 536 |||||||||| ||| |||| ||| ||||||||||||||||||||| || ||||||||||| Sbjct 621 TTTCTCTTGCCAGCTAGGCGGAAATAGTTTTTACGCTGAAACTTCATCTTATAGTCAACG 680 Query 537 CCAGCTAAACTCACCCTTTTCAGATTCTTCATCCAGTGAGGAGCAAATTGATATGATGTC 596 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 681 CCAGCTAAACTCACCCTTTTCAGATTCTTCATCCAGTGAGGAGCAAATTGATATGATGTC 740 Query 597 AGCTATTGATGAAAGCTTGAGTGATCGATCTGCGTTAAGTCAAGATTCTGATTCAGAAGA 656 |||||||||||||||||||||||||||||||||||| ||| ||| ||||||||||||||| Sbjct 741 AGCTATTGATGAAAGCTTGAGTGATCGATCTGCGTTGAGTGAAGCTTCTGATTCAGAAGA 800 Query 657 TGATGAAGA 665 ||||||||| Sbjct 801 TGATGAAGA 809 Score = 451 bits (244), Expect = 2e-125 Identities = 281/298 (94%), Gaps = 5/298 (2%) Strand=Plus/Plus Query 662 AAGATTGGATGGCTGAACA---CTTCAGCGATGTA-GAAAAGATTGACCTAAGCACCGCT 717 ||||||||||| ||||||| ||||| ||||| | |||||||||||| ||||||||||| Sbjct 905 AAGATTGGATGACTGAACATTGCTTCAACGATG-AGGAAAAGATTGACTTAAGCACCGCT 963 Query 718 GTTGTAATGACTTCGGAGTATGCTATACTAAAGGATATGCATTGTGCTGCATCTCTAGTA 777 ||| |||||||||||||||||| |||||| ||||||||||||||||||||||| |||||| Sbjct 964 GTTATAATGACTTCGGAGTATGTTATACTTAAGGATATGCATTGTGCTGCATCCCTAGTA 1023 Query 778 ATCTTTTCATGCAATGGCATCAAAATAAAGAGTTTCCTCGCAAATAATGAAGAAGGGCCA 837 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct 1024 ATCTTTTCATGCAATGGCATCAAAATAAAGAGTTTCCTCGCAAATAATGAAGAAGTGCCA 1083 Query 838 TTTTCTTGTGAATTTGGTGTTGAAGACATTGTTAGTATTCAATACAATTGGTACCAAAAT 897 ||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||| Sbjct 1084 TTTTCTTGTGAATTTGGAGTTGAAGACATAGTTAGTATTCAATACAATTGGTACCAAAAT 1143 Query 898 GTTGGATTGATCATTCTCAGACTTCGAGTTCTACTGAAGGATGAAAAATGCCATGAAG 955 ||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||| Sbjct 1144 GTTGGATTGATCATTCTCAGAATTCGAGTTCTACTGAAGGATGAAAATTGCCATGAAG 1201 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 158276705165 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5