BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg471112 Length=1464 Score E Sequences producing significant alignments: (Bits) Value AT1G10010.1 | Symbols: AAP8, ATAAP8 | amino acid permease 8 | c... 1260 0.0 > AT1G10010.1 | Symbols: AAP8, ATAAP8 | amino acid permease 8 | chr1:3265976-3268726 FORWARD LENGTH=1428 Length=1428 Score = 1260 bits (682), Expect = 0.0 Identities = 745/776 (96%), Gaps = 2/776 (0%) Strand=Plus/Plus Query 1 ATGGAAGCATACCACAATCCTTCGGCGGTGGAGTCGGGTGACACCGCCGTGAAAGGCGTC 60 ||||| |||||| ||||||| ||||||||||||||||||||| ||||||||||| ||||| Sbjct 1 ATGGACGCATACAACAATCCCTCGGCGGTGGAGTCGGGTGACGCCGCCGTGAAAAGCGTC 60 Query 61 GACGACGATGGTCGAGAGAAGAGAACGGGGACGTTTAT-GACGGCGAGTGCGCACATAAT 119 ||||||||||||||||||||||||||||| || ||| | ||||||||||||||||||||| Sbjct 61 GACGACGATGGTCGAGAGAAGAGAACGGGAACATTT-TGGACGGCGAGTGCGCACATAAT 119 Query 120 CACGGCGGTGATAGGCTCCGGGGTGCTGTCGTTGGCTTGGGCTTTAGCACAGCTTGGTTG 179 ||||||||| |||||||| |||||||||||||||||||||||| |||||||||||||||| Sbjct 120 CACGGCGGTCATAGGCTCAGGGGTGCTGTCGTTGGCTTGGGCTATAGCACAGCTTGGTTG 179 Query 180 GGTGGCAGGAACCATAATTTTGGTCGCTTTCGCCATCATTACTTACTACACCTCCACCAT 239 |||||||||||||| | |||||||||||||||||||||||||||||||||| |||||| | Sbjct 180 GGTGGCAGGAACCACAGTTTTGGTCGCTTTCGCCATCATTACTTACTACACGTCCACCTT 239 Query 240 GCTCGCCGACTGTTACCGTTCGCCGGACCCCATCAACGGAACACGCAACTATAATTACAT 299 |||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||| Sbjct 240 GCTCGCCGACTGTTACCGTTCGCCGGACTCCATCACCGGAACACGCAACTATAATTACAT 299 Query 300 GGGCGTCGTCCGAACTTACCTTGGGGGTAAAAAGGTTCAGCTATGTGGACTGGCACAGTA 359 ||||||||||||| |||||||||| |||||||||||||||||||||||| |||||||||| Sbjct 300 GGGCGTCGTCCGATCTTACCTTGGTGGTAAAAAGGTTCAGCTATGTGGAGTGGCACAGTA 359 Query 360 CGTGAATCTCGTAGGGGTCACTATTGGTTACACCATCACTGCCTCCATAAGCTTAGTAGC 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 360 CGTGAATCTCGTAGGGGTCACTATTGGTTACACCATCACTGCCTCCATAAGCTTAGTAGC 419 Query 420 GATTGGGAAATCAAATTGTTATCATGACAAGGGACATAAAGCGAAATGTTCTGTATCGAA 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 420 GATTGGGAAATCAAATTGTTATCATGACAAGGGACATAAAGCGAAATGTTCTGTATCGAA 479 Query 480 TTATCCGTACATGGCGGCATTTGGGATCATCCAGATTATTCTGAGCCAGCTTCCTAATTT 539 |||||| ||||||||||||||||||||| ||||||| |||||||||||||||||||| || Sbjct 480 TTATCCATACATGGCGGCATTTGGGATCGTCCAGATCATTCTGAGCCAGCTTCCTAACTT 539 Query 540 TCACAAGCTCTCTTTCCTCTCCATCATCGCCGCGGTTATGTCCTTCTCTTATGCGTCTAT 599 ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 540 CCACAAGCTCTCTTTCCTATCCATCATCGCCGCGGTTATGTCCTTCTCTTATGCGTCTAT 599 Query 600 TGGAATAGGCCTAGCCATCGCCACTGTAGCAAGTGGGAAGATTGGTAAGACAGAATTGAC 659 |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 600 CGGAATAGGCCTAGCCATCGCTACTGTAGCAAGTGGGAAGATTGGTAAGACAGAATTGAC 659 Query 660 AGGCACAGTGATAGGTGTGGACGTAACTGCGTCTGAAAAAGTTTGGAAATTGTTTCAAGC 719 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 660 AGGGACAGTGATAGGTGTGGACGTAACTGCGTCTGAAAAAGTTTGGAAATTGTTTCAAGC 719 Query 720 GATTGGAGACATTGCCTTTTCATATGCTTTTACCACTATTCTCATCGAGATTCAGG 775 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 720 GATTGGAGACATTGCCTTTTCATACGCTTTTACCACTATTCTCATCGAGATTCAGG 775 Score = 1074 bits (581), Expect = 0.0 Identities = 632/657 (96%), Gaps = 2/657 (0%) Strand=Plus/Plus Query 809 AGGACACATTGAGATCAAGCCCACCAGAGAACAAAGTGATGAAACGAGCGAGTCTTGCCG 868 ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| || Sbjct 773 AGGACACATTGAGATCAAGCCCACCAGAGAACAAAGTGATGAAACGAGCAAGTCTTGTCG 832 Query 869 GGGTCTCAACCACAACTGTTTTCTACATCTTGTGTGGTTGCATCGGATATGCTGCATTCG 928 | ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct 833 GAGTCTCAACCACAACTGTTTTCTACATCTTGTGTGGTTGCATCGGATATGCTGCGTTCG 892 Query 929 GGAACCAAGCCCCTGGTGACTTCCTTACTGATTTTGGTTTTTACGAACCTTATTGGCTCG 988 | |||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 893 GCAACCAAGCCCCTGGTGACTTCCTTACCGATTTTGGTTTTTACGAACCTTATTGGCTCA 952 Query 989 TCGACTTTGCCAATGCTTGCATTGCTCTCCATCTTATCGGTGCCTATCAGGTGTACGCGC 1048 |||||||||||||||||||||||||||||||||| || ||||||||||||||||| |||| Sbjct 953 TCGACTTTGCCAATGCTTGCATTGCTCTCCATCTAATAGGTGCCTATCAGGTGTATGCGC 1012 Query 1049 AGCCGTTTTTCCAGTTTGTTGAGGAGAACTGCAACAAAAAATGGCCTCAAAGCAATTTCA 1108 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 1013 AGCCGTTTTTCCAGTTTGTTGAGGAAAACTGCAACAAAAAATGGCCTCAAAGCAATTTCA 1072 Query 1109 TCAACAAAGAATACTCGTCAAACATACCTTTGCTTGGAAAATGTCGTGTCAACCTCTTCA 1168 |||||||||||||||||||||| | |||||||||||||||||||||||||||||||||| Sbjct 1073 TCAACAAAGAATACTCGTCAAAGGTTCCTTTGCTTGGAAAATGTCGTGTCAACCTCTTCA 1132 Query 1169 GACTGGTTTGGAGAACATGCTATGTGGTTTTGACAACATTTGTAGCAATGATATTCCCCT 1228 ||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 1133 GACTGGTTTGGAGGACATGCTATGTTGTTTTGACAACATTTGTAGCAATGATATTCCCCT 1192 Query 1229 TCTTCAATGCGATCTTGGGTTTGCTTGGGGCACTCGCGTTCTGGCCACTCACAGTTTATT 1288 ||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||| Sbjct 1193 TCTTCAATGCGATCTTGGGTTTGCTAGGGGCATTCGCGTTCTGGCCACTCACAGTTTATT 1252 Query 1289 TTCCGGTGGCAATGCACATTGCGCAGGC-AAAGGTCAAGAAGTATTCTCGTAGATGGTTG 1347 |||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| Sbjct 1253 TTCCGGTGGCAATGCACATTGCGCAGGCTAAA-GTCAAGAAGTATTCTCGTAGATGGTTG 1311 Query 1348 GCCTTGAACCTCCTCGTATTGGTTTGCTTGATCGTCTCAATCCTTGCCGCGGTAGGATCC 1407 |||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||| Sbjct 1312 GCCTTGAACCTCCTCGTATTGGTTTGCTTGATCGTCTCGGCCCTTGCCGCCGTAGGATCC 1371 Query 1408 ATCATTGGCTTAATAAATAGTGTCAAGTCATACAAGCCCTTCAAGAATTTAGACTAG 1464 |||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 1372 ATCATTGGCTTAATTAATAGTGTCAAGTCATACAAGCCCTTCAAGAATTTAGACTAG 1428 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 72188383710 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5