BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg471140
Length=3225
Score E
Sequences producing significant alignments: (Bits) Value
AT1G10290.1 | Symbols: ADL6, DRP2A | dynamin-like protein 6 | c... 5400 0.0
AT1G59610.1 | Symbols: ADL3, CF1, DRP2B, DL3 | dynamin-like 3 |... 3097 0.0
> AT1G10290.1 | Symbols: ADL6, DRP2A | dynamin-like protein 6 |
chr1:3370558-3377463 FORWARD LENGTH=3304
Length=3304
Score = 5400 bits (2924), Expect = 0.0
Identities = 3086/3164 (98%), Gaps = 11/3164 (0%)
Strand=Plus/Plus
Query 68 CAGATCTAATCGCGTGGCTTCCGTCTTCCTCCAGATCTCTTTACTTTGAATCGGTTACTC 127
|||||||||||| ||||||||| |||||||||||||||||| ||||||||||||||||||
Sbjct 123 CAGATCTAATCGAGTGGCTTCCTTCTTCCTCCAGATCTCTTCACTTTGAATCGGTTACTC 182
Query 128 GATCTCGATTCGCGGGA-GGCTTTTGCTAGTCGCGATGGAGGCGATCGATGAGTTGTCTC 186
||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 183 GATCTCGATTCGC-GGAGGGCTTTTGCTAGTCGCGATGGAGGCGATCGATGAGTTGTCTC 241
Query 187 AGCTCTCAGATTCGATGAAACAGGCGGCGTCGCTTCTCGCCGACGAAGATCCCGACGAGA 246
||||||||||||||||||| ||||||||||| || ||||||||||||||||||||||| |
Sbjct 242 AGCTCTCAGATTCGATGAAGCAGGCGGCGTCTCTCCTCGCCGACGAAGATCCCGACGAAA 301
Query 247 CCTCTTCTTCCAAGCGCCCTGCTACTTTCCTCAACGTCGTTGCCTTAGGAAATGTGGGAG 306
|||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||
Sbjct 302 CCTCTTCTTCCAAGCGCCCTGCCACTTTCCTCAACGTCGTTGCCTTGGGAAATGTGGGAG 361
Query 307 CTGGAAAGTCTGCAGTTCTAAACAGTCTAATTGGGCATCCAGTGCTGCCGACGGGTGAGA 366
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 362 CTGGAAAGTCTGCAGTTCTAAACAGTCTAATTGGGCATCCAGTGCTGCCGACGGGTGAGA 421
Query 367 ATGGTGCTACACGAGCTCCTATAATAATTGAATTGAGCAGGGAGAGTTCTTTGAGCAGCA 426
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 422 ATGGTGCTACACGAGCTCCTATAATAATTGAATTGAGCAGGGAGAGTTCTTTGAGCAGCA 481
Query 427 AGGCGATTATCTTGCAAATTGACAATAAATCTCAGCAAGTTTCTGCAAGTGCTCTGAGAC 486
|||| |||||||||||||| |||||||||||||| |||||||||||||||||| ||||||
Sbjct 482 AGGCAATTATCTTGCAAATCGACAATAAATCTCAACAAGTTTCTGCAAGTGCTTTGAGAC 541
Query 487 ATTCTCTACAAGATAGACTTAGCAAAGGAGCCTCAGGGAAGAACCGTGATGAAATAAACT 546
||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 542 ATTCTCTGCAAGATAGACTTAGCAAAGGAGCCTCAGGGAAGAATCGTGATGAAATAAACT 601
Query 547 TAAAACTTCGTACCAGCACAGCTCCACCATTGAAATTAGTTGATCTGCCTGGACTGGACC 606
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 602 TAAAACTTCGTACCAGCACAGCTCCACCATTGAAATTAGTTGATCTGCCTGGACTGGACC 661
Query 607 AGAGGATTGTGGACGAGTCAATGATTGCTGAATACGCGCAACACAATGATGCCATACTGC 666
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 662 AGAGAATTGTGGACGAGTCAATGATTGCTGAATACGCGCAACACAATGATGCCATACTGC 721
Query 667 TGGTTATAGTGCCTGCTAGCCAGGCATCTGAAATTTCATCATCCCGAGCCCTTAAGATTG 726
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 722 TGGTTATAGTGCCTGCTAGCCAGGCATCTGAAATTTCATCATCCCGAGCCCTGAAGATTG 781
Query 727 CAAAGGAGTATGATCCAGAGAGTACTAGGACAATAGGCATTATTGGAAAAATTGACCAGG 786
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 782 CAAAGGAGTATGATCCAGAGAGTACTAGGACAATAGGCATTATTGGAAAAATTGACCAGG 841
Query 787 CAGCAGAGAACTCGAAAGCCCTTGCAGCTGTTCAGGCTCTTCTTTCAAATCAAGGACCTC 846
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 842 CAGCAGAGAACTCGAAAGCCCTTGCAGCTGTTCAGGCTCTTCTTTCAAATCAAGGACCTC 901
Query 847 CAAAAACAACTGACATTCCATGGGTTGCTATTATTGGCCAGTCCGTTTCAATTGCGTCAG 906
||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||
Sbjct 902 CAAAAACAACTGACATTCCATGGGTTGCTGTTATTGGCCAATCCGTTTCAATTGCGTCAG 961
Query 907 CACAGTCTGGAAGTGGTGAGAACTCCTTAGAAACTGCTTGGCGTGCTGAGAGTGAAAGTC 966
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 962 CACAGTCTGGAAGTGGTGAGAACTCCTTAGAAACTGCTTGGCGTGCTGAGAGTGAAAGTC 1021
Query 967 TTAAGTCCATTTTGACTGGGGCTCCACAAACCAAGCTTGGCAGAATCGCGTTGGTGGACA 1026
|||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||| |
Sbjct 1022 TTAAGTCCATTTTGACTGGGGCTCCACAAAGCAAGCTTGGCAGAATTGCGTTGGTGGATA 1081
Query 1027 CCCTTGCTAGCCAGATTCGTAGCAGAATGAAGCTCAGGCTTCCAAGTGTCTTGTCTGGGC 1086
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 1082 CCCTTGCTAGCCAGATTCGTAGCAGAATGAAGCTCAGGCTTCCAAGTGTCCTGTCTGGGC 1141
Query 1087 TCCAGGGTAAGTCTCAAATAGTGCAGGATGAGCTAGCGAGGCTTGGTGAACAATTAGTTA 1146
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 1142 TCCAGGGTAAGTCTCAAATAGTGCAGGATGAGCTAGCGAGGCTTGGTGAACAACTAGTTA 1201
Query 1147 ACAGTGCTGAAGGTACAAGGGCTATAGCTTTGGAGCTTTGCCGTGAGTTTGAAGACAAGT 1206
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1202 ACAGTGCTGAAGGTACAAGGGCTATAGCTTTGGAGCTTTGCCGTGAGTTTGAAGACAAGT 1261
Query 1207 TTCTTCTGCACTTGGCTGGTGGTGAAGGAAGTGGTTGGAAAGTTGTTGCAAGTTTTGAAG 1266
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1262 TTCTTCTGCACTTGGCTGGTGGTGAAGGAAGTGGTTGGAAAGTTGTTGCAAGTTTTGAAG 1321
Query 1267 GAAATTTCCCCAACCGTATCAAGCAGCTTCCATTGGATAGACATTTTGACTTGAACAATG 1326
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 1322 GAAATTTCCCCAACCGTATCAAGCAGCTTCCATTGGATAGACATTTTGACCTGAACAATG 1381
Query 1327 TTAAAAGGGTTGTTTTGGAGGCAGATGGTTATCAACCTTATCTTATATCTCCAGAGAAAG 1386
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1382 TTAAAAGGGTTGTTTTGGAGGCAGATGGTTATCAACCTTATCTTATATCTCCAGAGAAAG 1441
Query 1387 GGTTGAGATCGTTGATAAAGATTGTCCTTGAGTTGGCTAAAGACCCGGCACGTCTTTGTG 1446
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 1442 GGTTGAGATCGTTGATAAAGATTGTCCTTGAGTTGGCTAAAGACCCGGCACGCCTTTGTG 1501
Query 1447 TTGATGAGGTTCACCGAGTTCTTGTTGACATAGTTTCGGCCTCTGCAAATGCTACACCTG 1506
||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||
Sbjct 1502 TTGATGAGGTTCACCGAGTTCTTGTTGACATAGTTTCAGCTTCTGCAAATGCTACACCTG 1561
Query 1507 GACTTGGGAGATATCCTCCTTTCAAGCGAGAGGTTGTAGCTATAGCAAGTGCAGCACTTG 1566
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1562 GACTTGGGAGATATCCTCCTTTCAAGCGAGAGGTTGTAGCTATAGCAAGTGCAGCACTTG 1621
Query 1567 ATGGTTTCAAGAATGAAGCCAAGAAAATGGTGGTTGCACTAGTTGATATGGAACGCGCTT 1626
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1622 ATGGTTTCAAGAATGAAGCCAAGAAAATGGTGGTTGCACTAGTTGATATGGAACGCGCTT 1681
Query 1627 TTGTACCACCTCAACATTTTATCCGTCTTGTGCAAAGGAGAATGGAAAGACAACGTCGCG 1686
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1682 TTGTACCACCTCAACATTTTATCCGTCTTGTGCAAAGGAGAATGGAAAGACAACGTCGCG 1741
Query 1687 AGGAAGAGCTGAAAGGGCGATCTTCTAAGAAGGGACAAGATGCAGAGCAGTCCCTTTTAA 1746
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1742 AGGAAGAGCTGAAAGGGCGATCTTCTAAGAAGGGACAAGATGCAGAGCAGTCCCTTTTAA 1801
Query 1747 GCAGGGCTACTAGTCCTCAGCCAGATGGGCCAACAGCTGGTGGTAGCTTAAAATCAATGA 1806
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1802 GCAGGGCTACTAGTCCTCAGCCAGATGGGCCAACAGCTGGTGGTAGCTTAAAATCAATGA 1861
Query 1807 AAGACAAACCTAGTCCGCAAGATAAAGAGACGCCGGAGGTCTCTGGTCTGAAAACTGCTG 1866
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1862 AAGACAAACCTAGTCCGCAAGATAAAGAGACGCCGGAGGTCTCTGGTCTGAAAACTGCTG 1921
Query 1867 GACCTGAGGGGGAGATAACAGCAGGGTACTTAATGAAGAAAAGTGCAAAAACAAATGGGT 1926
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1922 GACCTGAGGGGGAGATAACAGCAGGGTACTTAATGAAGAAAAGTGCAAAAACAAATGGGT 1981
Query 1927 GGAGTAGGCGATGGTTTGTTCTGAATGAGAAAACTGGAAAGCTCGGCTATACCAAAAAGC 1986
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 1982 GGAGTAGGCGATGGTTTGTTCTGAATGAGAAAACTGGAAAGCTTGGCTATACCAAAAAGC 2041
Query 1987 AAGAAGAAAGAAACTTCCGGGGCACTATAACTTTGGAGGAATGCACTATTGAAGAAATTC 2046
|||||||||||||||| |||||||| |||||||||||||||||||||||||||||||| |
Sbjct 2042 AAGAAGAAAGAAACTTTCGGGGCACGATAACTTTGGAGGAATGCACTATTGAAGAAATCC 2101
Query 2047 CCGAGGACGAAGTAGAAAAGTCAAAGAGCTCGAAGGACAAGAAGGCAAATGGACCTGATT 2106
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2102 CCGAGGACGAAGTAGAAAAGTCAAAGAGCTCGAAGGACAAGAAGGCAAATGGACCTGATT 2161
Query 2107 CAAAAGGACCAGGCCTTGTATTTAAAATAACCTGCAAGGTTCCCTATAAGACTGTACTAA 2166
||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |
Sbjct 2162 CAAAAGGACCAGGCCTTGTGTTTAAAATAACCTGCAAGGTTCCCTATAAGACTGTACTCA 2221
Query 2167 AAGCTCACAATGCCCTTGTGCTTAAGGCTGAGAGTGTAGTCGATAAGAACGAGTGGATTA 2226
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 2222 AAGCTCACAATGCCCTTGTGCTTAAGGCTGAGAGTGTAGTCGACAAGAACGAGTGGATTA 2281
Query 2227 ATAAGTTGCAAAAGGTTATCCAGGCTCGTGGAGGCCAAGTGGGCAGTGTTTCCATGAGAC 2286
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 2282 ATAAGTTGCAAAAGGTTATCCAGGCTCGTGGAGGCCAAGTGGGCAGTGTTTCCATGAGGC 2341
Query 2287 AGAGTCTTTCAGAAGGTTCACTTGATAAGATGGTTAGGAAACCCATCGATCCAGAAGAGG 2346
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2342 AGAGTCTTTCAGAAGGTTCACTTGATAAGATGGTTAGGAAACCCATCGATCCAGAAGAGG 2401
Query 2347 AGCTCCGGTGGATGTCCCAAGAAGTACGGGGTTATGTTGAAGCTGTTCTTAACAGTCTTG 2406
|||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||
Sbjct 2402 AGCTCCGGTGGATGTCCCAAGAAGTACGGGGTTACGTTGAAGCTGTTCTTAACAGCCTTG 2461
Query 2407 CAGCCAATGTTCCAAAGGCTGTTGTTCTTTGTCAAGTGGAGAAAGCAAAGGAAGACATGC 2466
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 2462 CAGCCAATGTTCCAAAGGCTGTTGTTCTTTGTCAAGTAGAGAAAGCAAAGGAAGACATGC 2521
Query 2467 TGAATCAACTATACAGTTCTATAAGTGCAATAGGCAATGAAAGGATTGAGTCATTGATTC 2526
|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 2522 TGAATCAACTCTACAGTTCTATAAGTGCAATAGGCAATGAAAGGATTGAGTCATTGATAC 2581
Query 2527 AAGAGGATCAGAATGTCAAAAGACGAAGAGAGCGTTACCAGAAACAATCCTCTCTTCTTT 2586
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2582 AAGAGGATCAGAATGTCAAAAGACGAAGAGAGCGTTACCAGAAACAATCCTCTCTTCTTT 2641
Query 2587 CGAAACTCACGAGGCAGCTTAGCATTCACGACAATCGAGCAGCTGCTGCTTCAAGTTATT 2646
| |||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||
Sbjct 2642 CTAAACTCACGAGGCAGCTTAGCATTCACGACAACCGAGCAGCAGCTGCTTCAAGTTATT 2701
Query 2647 CGGACAATAGTGGCACTGAAAGTAGCCCAAGAACAAGTGGAGGTTCTTCAGGGGACGACT 2706
||||||| ||||||||||| |||||||||||| |||||||||||||||||||||||||||
Sbjct 2702 CGGACAACAGTGGCACTGAGAGTAGCCCAAGAGCAAGTGGAGGTTCTTCAGGGGACGACT 2761
Query 2707 GGATGAATGCCTTCAACTCCGCTGCTAACGGACCCTCAGACTCATTGTCAAGGTACGGTT 2766
|||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||
Sbjct 2762 GGATGAATGCCTTCAACTCCGCTGCTAATGGACCCTCAGACTCATTGTCAAAGTACGGTT 2821
Query 2767 CCGGTGGTCACAGCCGCCGCTACAGTGACCCCGCTCAGAACGGAGATGCAGCATCACCAG 2826
||||||||||||||||||| ||||||||||| || |||||||||||||||||||||||||
Sbjct 2822 CCGGTGGTCACAGCCGCCGTTACAGTGACCCTGCGCAGAACGGAGATGCAGCATCACCAG 2881
Query 2827 GCTCTGGTAGCAACCGCCGCACCACCCCCAATCGGTTGCCACCAGCACCACCGCCGACAG 2886
| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 2882 GGTCTGGTAGCAACCGCCGCACCACCCCCAATCGGTTGCCACCAGCACCACCGCCTACAG 2941
Query 2887 GTTCAGCTTACAGGTATTAGACCCTGAGGGaaaaaaaaCCTGGAAGCGCATTGGGTCCCG 2946
|||||||||| |||||||||| ||||| | |||||| ||||||||||||||| ||||||
Sbjct 2942 GTTCAGCTTATAGGTATTAGAACCTGAAG-AAAAAAC-CCTGGAAGCGCATTGTGTCCCG 2999
Query 2947 TTTTCTGGGACTAAGTTACTCTTATTTTTTCTAGTTTAAGACAGTGATTGGATGATTGTA 3006
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3000 TTTTCTGGGACTACGTTACTCTTATTTTTTCTAGTTTAAGACAGTGATTGGATGATTGTA 3059
Query 3007 CTACTGTTTTGTCTTCTTTGTAGATAGATATTATC-CACACATGTGTTCGCAGCTAAAA- 3064
|||||||||| | ||||||||||||||||||||| |||||||||||| ||||||||||
Sbjct 3060 CTACTGTTTTTTGGTCTTTGTAGATAGATATTATCACACACATGTGTTGGCAGCTAAAAA 3119
Query 3065 -GAGTTTGGTCTCATGAGTCAAATGTCTGtttgaatttttgttttgtttcttattcaact 3123
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 3120 AGAGTTTGGTCTCATGAGTCAAATGTCTGTTTGAATTTTTGTTTTATTTCTTATTCAACT 3179
Query 3124 attt-ttggcatccattttttgAGCACCCTATGCTGT-GATAGTTATAGAATGAATTTTG 3181
||| |||||||||||||||||||||| ||||||||| | ||||||||||||||||||||
Sbjct 3180 -TTTCTTGGCATCCATTTTTTGAGCACGCTATGCTGTAG-TAGTTATAGAATGAATTTTG 3237
Query 3182 TATCTGATATTCTTATGAATCTGAACCGTTTGGGTAAATTACTA 3225
|||||||||||||||||||||||||| |||||||||||||||||
Sbjct 3238 TATCTGATATTCTTATGAATCTGAACTGTTTGGGTAAATTACTA 3281
Score = 111 bits (60), Expect = 3e-23
Identities = 65/67 (97%), Gaps = 1/67 (1%)
Strand=Plus/Plus
Query 1 CTTACGAAATCCCCGACGAAAAATCTTTAGCTTAACACCATCGCGACCGGATTCCAAATT 60
|||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 1 CTTACGAAATCCCCAACGAAAAATC-TTAGCTTAACACCATCGCGACCGGATTCCAAATT 59
Query 61 CCGGCCC 67
|||||||
Sbjct 60 CCGGCCC 66
> AT1G59610.1 | Symbols: ADL3, CF1, DRP2B, DL3 | dynamin-like 3
| chr1:21893221-21901086 FORWARD LENGTH=3261
Length=3261
Score = 3097 bits (1677), Expect = 0.0
Identities = 2426/2786 (87%), Gaps = 58/2786 (2%)
Strand=Plus/Plus
Query 160 CGATGGAGGCGATCGATGAGTTGTCTCAGCTCTCAGATTCGATGAAACAGGCGGCGTCGC 219
||||||||||||||||||||||||||||||| || |||||||||| ||| |||||||| |
Sbjct 191 CGATGGAGGCGATCGATGAGTTGTCTCAGCTTTCGGATTCGATGAGACAAGCGGCGTCTC 250
Query 220 TTCTCGCCGACGAAGATCCCGACGAGACCTCTTCTTCCAAG-CGCCCTGCTACTTTC-CT 277
| ||||| |||||||||||||| ||||||||||||| | || || || ||||| ||| ||
Sbjct 251 TGCTCGCTGACGAAGATCCCGATGAGACCTCTTCTT-CTAGACGGCCAGCTAC-TTCTCT 308
Query 278 CAACGTCGTTGCCTTAGGAAATGTGGGAGCTGGAAAGTCTGCAGTTCTAAACAGTCTAAT 337
||||||||||||| |||| |||||||||||||||||||||||||||||||| || |||||
Sbjct 309 CAACGTCGTTGCCCTAGGGAATGTGGGAGCTGGAAAGTCTGCAGTTCTAAATAGCCTAAT 368
Query 338 TGGGCATCCAGTGCTGCCGACGGGTGAGAATGGTGCTACACGAGCTCCTATAATAATTGA 397
|||||||||||| ||||||||||||||||||||||| ||||| |||||||| || |||||
Sbjct 369 TGGGCATCCAGTTCTGCCGACGGGTGAGAATGGTGCGACACGGGCTCCTATTATCATTGA 428
Query 398 ATTGAGCAG-GGAGAGTTCTTTGAGCAGCAAGGCGATTATCTTGCAAATTGACAATAAAT 456
||||| || | ||| || ||||||||||||| || |||||||||||||||||||||
Sbjct 429 TTTGAGTAGAGAAGA-ATCACTGAGCAGCAAGGCAATAATCTTGCAAATTGACAATAAAA 487
Query 457 CTCAGCAAGTTTCTGCAAGTGCTCTGAGACATTCTCTACAAGATAGACTTAGCAAAGGAG 516
||| ||||||||||||||||| || || ||||| ||||||||||| |||||||||||||
Sbjct 488 ATCAACAAGTTTCTGCAAGTGCACTAAGGCATTCACTACAAGATAGGCTTAGCAAAGGAG 547
Query 517 CCTCAGGGAA-GAACCGTGATGAAATAAACTTAAAACTTCGTACCAGCACAGCTCCACCA 575
| ||| |||| | |||||||||||| || |||||||||||||||||||||||||||||
Sbjct 548 CTTCA-GGAAGGGGTCGTGATGAAATATACCTAAAACTTCGTACCAGCACAGCTCCACCA 606
Query 576 TTGAAATTAG-TTGATCTGCCTGGACTGGACCAGAGGATTGTGGACGAGTCAATGATTGC 634
||||||| | ||||| ||||||||||||||||| | ||||||||||| || |||||||
Sbjct 607 CTGAAATT-GATTGATTTGCCTGGACTGGACCAGCGAATTGTGGACGATTCTATGATTGG 665
Query 635 TGAATACGCGCAACACAATGATGCCATACTGCTGGTTATAGTGCCTGCTAGCCAGGCATC 694
|||| | || || ||||| ||||| ||| |||||||| | ||||||||||||||||||||
Sbjct 666 TGAACATGCACAGCACAACGATGCTATATTGCTGGTTGTTGTGCCTGCTAGCCAGGCATC 725
Query 695 TGAAATTTCATCATCCCGAGCCCTTAAGATTGCAAAGGAGTATGATCCAGAGAGTACTAG 754
||||||||| ||||| |||||||| ||||| |||||||||||||||||||||||||||||
Sbjct 726 TGAAATTTCGTCATCTCGAGCCCTGAAGATCGCAAAGGAGTATGATCCAGAGAGTACTAG 785
Query 755 GACAATAGGCATTATTGGAAAAATTGACCAGGCAGCAGAGAACTCGAAAG-CCCTTGCAG 813
|||| |||| ||||| | |||||||| ||||||||||||||| | |||| |||||||||
Sbjct 786 GACAGTAGGAATTATCAGCAAAATTGATCAGGCAGCAGAGAAC-CCAAAGTCCCTTGCAG 844
Query 814 CTGTTCAGGCTCTTCTTTCAAATCAAGGACCTCCAAAAACAACTGACATTCCATGGGTTG 873
| |||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 845 CAGTTCAGGCGCTTCTTTCAAATCAAGGACCTCCAAAAACAACTGATATTCCATGGGTTG 904
Query 874 CTA-TTATTGGCCAGTCCGTTTCAATTGCGTCAGCACAGTCTGGAAGTGGTGAGAACTCC 932
| | |||||||||| || || |||||||| ||||| ||||||||| | ||||||||||
Sbjct 905 C-ACTTATTGGCCAATCTGTCTCAATTGCATCAGCGCAGTCTGGAGGCAGTGAGAACTCT 963
Query 933 TTAGAAACTGCTTGGCGTGCTGAGAGTGAAAGTCTTAAGTCCATTTTGACTGGGGCTCCA 992
|||||||||||||||||||||||||||||||| ||||| |||||||||||||| ||||||
Sbjct 964 TTAGAAACTGCTTGGCGTGCTGAGAGTGAAAGCCTTAAATCCATTTTGACTGGTGCTCCA 1023
Query 993 CAAACCAAGCTTGGCAGAATCGCGTTGGTGGACACCCTTGCTAGCCAGATTCGTAGCAGA 1052
|||| ||| ||||||||||| || |||| ||||| |||||||||||||| |||||||||
Sbjct 1024 CAAAGCAAACTTGGCAGAATTGCCCTGGTCGACACTCTTGCTAGCCAGATCCGTAGCAGA 1083
Query 1053 ATGAAGCTCAGGCTTCC-AAGTGTCTTGTCTGGGCTCCAGGGTAAGTCTCAAATAGTGCA 1111
||||||||||||||||| || |||| |||| ||||||||||||||||||||||||||
Sbjct 1084 ATGAAGCTCAGGCTTCCGAA-CATCTTAACTGGACTCCAGGGTAAGTCTCAAATAGTGCA 1142
Query 1112 GGATGAGCTAGCGAGGCTTGGTGAACAATTAGTTAACAGTGCTGAAGGTACAAGGGCTAT 1171
||| || |||||||||||||||| ||||| |||| |||||||||||| |||||||| ||
Sbjct 1143 GGACGAATTAGCGAGGCTTGGTGAGCAATTGGTTAGCAGTGCTGAAGGCACAAGGGCAAT 1202
Query 1172 AGCTTTGGAGCTTTGCCGTGAGTTTGAAGACAAGTTTCTTCTGCACTTGGCTGGTGGTGA 1231
||||||||||||||| ||||||||||||||||| |||||||| || || |||||||||||
Sbjct 1203 AGCTTTGGAGCTTTGTCGTGAGTTTGAAGACAAATTTCTTCTCCATTTAGCTGGTGGTGA 1262
Query 1232 AGGAAGTGGTTGGAAAGTTGTTGCAAGTTTTGAAGGAAATTTCCCCAACCGTATCAAGCA 1291
|||||||||||||||||||||||||||||||||||| ||||||||||| |||||||| |
Sbjct 1263 AGGAAGTGGTTGGAAAGTTGTTGCAAGTTTTGAAGGCAATTTCCCCAATCGTATCAAAAA 1322
Query 1292 GCTTCCATTGGATAGACATTTTGACTTGAACAATGTTAAAAGGGTTGTTTTGGAGGCAGA 1351
|||||| ||||||||||||||||||||||||||||| |||||| | || |||||||| ||
Sbjct 1323 GCTTCCGTTGGATAGACATTTTGACTTGAACAATGTCAAAAGGATCGTGTTGGAGGCTGA 1382
Query 1352 TGGTTATCAACCTTATCTTATATCTCCAGAGAAAGGGTTGAGATCGTTGATAAAGATTGT 1411
|||||||||||||||||| ||||||||||||||||||||||||||||| ||||| | ||
Sbjct 1383 TGGTTATCAACCTTATCTCATATCTCCAGAGAAAGGGTTGAGATCGTTAATAAAAACCGT 1442
Query 1412 CCTTGAGTTGGCTAAAGACCCGGCACGTCTTTGTGTTGATGAGGTTCACCGAGTTCTTGT 1471
|||||||||||||||||||| ||||| || ||||||||||||||||||||||| |||||
Sbjct 1443 TCTTGAGTTGGCTAAAGACCCAGCACGACTATGTGTTGATGAGGTTCACCGAGTGCTTGT 1502
Query 1472 TGACATAGTTTCGGCCTCTGCAAATGCTACACCTGGACTTGGGAGATATCCTCCTTTCAA 1531
|||||||||||| || || || ||||| |||||||| |||||||||||||||||||| ||
Sbjct 1503 TGACATAGTTTCAGCTTCCGCGAATGCCACACCTGGTCTTGGGAGATATCCTCCTTTTAA 1562
Query 1532 GCGAGAGGTTGTAGCTATAGCAAGTGCAGCACTTGATGGTTTCAAGAATGAAGCCAAGAA 1591
| ||||||||||||||||||||||||| ||||||||||| |||||||||||||| |||||
Sbjct 1563 GAGAGAGGTTGTAGCTATAGCAAGTGCCGCACTTGATGGATTCAAGAATGAAGCTAAGAA 1622
Query 1592 AATGGTGGTTGCACTAGTTGATATGGAACGCGCTTTTGTACCACCTCAACATTTTATCCG 1651
||||| |||||| ||||||||||||| || || |||||||||||||| || || |||||
Sbjct 1623 GATGGTAGTTGCATTAGTTGATATGGAGCGTGCATTTGTACCACCTCAGCACTTCATCCG 1682
Query 1652 TCTTGTGCAAAGGAGAATGGAAAGACAACGTCGCGAGGAAGAGCTGAAAGGGCGATCTTC 1711
|| || ||||| ||||||||||| || ||||| ||||| ||||| ||||| || || ||
Sbjct 1683 CCTCGTACAAAGAAGAATGGAAAGGCAGCGTCGTGAGGAGGAGCTAAAAGGTCGTTCCTC 1742
Query 1712 TAAGAAGGGACAAGATGCAGAGCAGTCCCTTTTAAGCAGGGCTACTAGTCCTCAGCCAGA 1771
||| ||||||||||||||||||||||| || |||| ||||||||||||||||||||||||
Sbjct 1743 TAAAAAGGGACAAGATGCAGAGCAGTCTCTCTTAAACAGGGCTACTAGTCCTCAGCCAGA 1802
Query 1772 TGGGCCA--A-CAGCTGGTGGTAGCTTAAAATCAATGAAAGACAAA------CCT-A-G- 1819
||||||| | || ||||||||||||||||||| ||| ||||||| || | |
Sbjct 1803 TGGGCCATCATCAACTGGTGGTAGCTTAAAATCTTTGAGAGACAAATTAATGCCACAAGA 1862
Query 1820 TCC-GC-AA-GATAAAGA----GA--CGCCGGAGGTCTCTGGTCTGAAAACTGCTGGACC 1870
| | || |||||||| || | |||||||| ||||||||||| |||||||||||
Sbjct 1863 TAAAGATAAAGATAAAGAAAAAGAGACTCCGGAGGTGTCTGGTCTGAAGACTGCTGGACC 1922
Query 1871 TGAGGGGGAGATAACAGCAGGGTACTTAATGAAGAAAAGTGCAAAAACAAATGGGTGGAG 1930
|||||| |||||||| ||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 1923 TGAGGGAGAGATAACTGCAGGGTACTTAATGAAGAAAAGTGCAAAGACAAATGGGTGGAG 1982
Query 1931 TAGGCGATGGTTTGTTCTGAATGAGAAAACTGGAAAGCTCGGCTATACCAAAAAGCAAGA 1990
|||||||||||||||||||||||| |||||||||||||| || ||||| ||||| |||||
Sbjct 1983 TAGGCGATGGTTTGTTCTGAATGAAAAAACTGGAAAGCTTGGTTATACAAAAAAACAAGA 2042
Query 1991 AGAAAGAAACTTCCGGGGCACTATAACTTTGGAGGAATGCACTATTGAAGAAATTCCCGA 2050
||||||||||||||| |||||| |||||||||||||||||| ||| ||||||||| | ||
Sbjct 2043 AGAAAGAAACTTCCGCGGCACTGTAACTTTGGAGGAATGCAGTATCGAAGAAATTTCTGA 2102
Query 2051 GGACGAAGTAGAAAAGTCAAAGAGCTCGAAGGACAAGAAGGCAAATGGACCTGATTCAAA 2110
|| |||| |||||| |||||||||||||| || ||||| |||||||||| ||||||||
Sbjct 2103 TGATGAAGGAGAAAAATCAAAGAGCTCGAAAGATAAGAAATCAAATGGACCGGATTCAAA 2162
Query 2111 AGGACCAGGCCTTGTATTTAAAATAACCTGCAAGGTTCCCTATAAGACTGTACTAAAAGC 2170
||||||||||||||||||||| ||||| |||| |||||| |||||||||||||| |||||
Sbjct 2163 AGGACCAGGCCTTGTATTTAAGATAACTTGCAGGGTTCCATATAAGACTGTACTTAAAGC 2222
Query 2171 TCACAATGCCCTTG-TGCTTAAGGCTGAGAGTGTAGTCGATAAGAACGAGTGGATTAATA 2229
||||||||| ||| | || ||||| ||||| | || |||||||| || ||||| ||||
Sbjct 2223 TCACAATGCG-TTGGTTCTCAAGGCCGAGAGCATGGTTGATAAGAATGAATGGATAAATA 2281
Query 2230 AGTTGCAAAAGGTTATCCAGGCTCGTGGAGGCCAAGTGGGCAGTGTTTCCATGAGACAGA 2289
|| ||||||||||||||||||| || |||||||||||||| || | |||||||||||| |
Sbjct 2282 AGCTGCAAAAGGTTATCCAGGCCCGAGGAGGCCAAGTGGGTAGCGCTTCCATGAGACAAA 2341
Query 2290 GTCTTTCAGAAGGTTCACTTGATAAGATGGTTAGGAAACCCATCGATCCAGAAGAGGAGC 2349
||||||||||||| ||||||||||||||||| |||||||| |||| || ||||||||
Sbjct 2342 GTCTTTCAGAAGGCTCACTTGATAAGATGGTAAGGAAACCGGTCGACCCGGAAGAGGAAT 2401
Query 2350 TCCGGTGGATGTCCCAAGAAGTACGGGGTTATGTTGAAGCTGTTCTTAACAGTCTTGCAG 2409
| |||||||||||||||||||||||||||||||||||||||||||| |||||||| || |
Sbjct 2402 TACGGTGGATGTCCCAAGAAGTACGGGGTTATGTTGAAGCTGTTCTCAACAGTCTAGCTG 2461
Query 2410 CCAATGTTCCAAAGGCTGTTGTTCTTTGTCAAGTGGAGAAAGCAAAGGAAGACATGCTGA 2469
||||||||||||||||||||||||| ||||||||||||||| | ||||||||||||||||
Sbjct 2462 CCAATGTTCCAAAGGCTGTTGTTCTCTGTCAAGTGGAGAAATCCAAGGAAGACATGCTGA 2521
Query 2470 ATCAACTATACAGTTCTATAAGTGCAATAGGCAATGAAAGGATTGAGTCATTGATTCAAG 2529
|||| |||||||| ||||| || ||||| || ||||| |||||||| |||||||||||||
Sbjct 2522 ATCAGCTATACAGCTCTATCAGCGCAATTGGTAATGAGAGGATTGAATCATTGATTCAAG 2581
Query 2530 AGGATCAGAATGTCAAAAGACGAAGAGAGCGTTACCAGAAACAATCCTCTCTTCTTTCGA 2589
|||||||||| ||||||||||||||||| |||||||||||||| ||||||||||| || |
Sbjct 2582 AGGATCAGAACGTCAAAAGACGAAGAGACCGTTACCAGAAACAGTCCTCTCTTCTCTC-A 2640
Query 2590 AA-CTCACGAGGCAGCTTAGCATTCACGACAATCGAGCAGCTGCTGCTTCAAGTTATTCG 2648
|| ||||| |||||||||||||||||||| || |||||||||||||||||||| | ||
Sbjct 2641 AAGCTCACTAGGCAGCTTAGCATTCACGATAACCGAGCAGCTGCTGCTTCAAGCTGGTCT 2700
Query 2649 GACAATAGTGGCACTGAAAGTAGCCCAAGAAC-AAGTGGAGGTTCTTCAGGGGACGACTG 2707
|||||||||||||||||||| ||||| ||||| || |||||| || ||||| || |||||
Sbjct 2701 GACAATAGTGGCACTGAAAGCAGCCCGAGAACCAA-TGGAGGGTCATCAGGAGAGGACTG 2759
Query 2708 GATGAATGCCTTCAACTCCGCTGCTAACGGACCCTCAGACTCATTGTCAAG-G-TACGGT 2765
||||||||| || ||| | ||||||| ||||| | ||||||||| ||| | || ||
Sbjct 2760 GATGAATGCGTTTAACGCAGCTGCTAGTGGACC-T--GACTCATTG--AAGAGATATGGA 2814
Query 2766 TCCGGTGGTCACAGCCGCCGCTACAGTGACCCCGCTCAGAACGGAGATGCAGCAT-CACC 2824
|| || || || ||||| || |||||||| || || ||||| || || | | || | |
Sbjct 2815 TCTGGCGGCCATAGCCGTCGTTACAGTGATCCAGCACAGAATGGTGA-G--G-ATTCTTC 2870
Query 2825 AGGCTCTGGTAGCAAC-CGC--CGCACCACCCCCAATCGGTTGCCACCAGCACCACCGCC 2881
|| |||||| ||| | | | |||||||| || || ||| | |||||||| || || |
Sbjct 2871 TGGATCTGGTGGCAGCTCCCGTCGCACCACACCAAACCGGCTCCCACCAGCTCCGCCACA 2930
Query 2882 GACAGGTTCAGCTTACAGGTATTAGA 2907
| | || ||| |||||||||||||||
Sbjct 2931 GTCTGGATCATCTTACAGGTATTAGA 2956
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 160433883714
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5