BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg471244
Length=3926
Score E
Sequences producing significant alignments: (Bits) Value
AT1G11100.2 | Symbols: | SNF2 domain-containing protein / heli... 3038 0.0
AT1G61140.1 | Symbols: EDA16 | SNF2 domain-containing protein /... 564 3e-159
AT1G11090.1 | Symbols: | alpha/beta-Hydrolases superfamily pro... 132 3e-29
> AT1G11100.2 | Symbols: | SNF2 domain-containing protein / helicase
domain-containing protein / zinc finger protein-related
| chr1:3703672-3709302 REVERSE LENGTH=4072
Length=4072
Score = 3038 bits (1645), Expect = 0.0
Identities = 1940/2083 (93%), Gaps = 17/2083 (1%)
Strand=Plus/Plus
Query 1 ATGAGTGAGAAGGATTCAGTATTTCAGTCGCAAGCGGATGATTACTCTGGTGGCTTTGGA 60
|||||| |||||||||||||||||||||||||||||||||||| |||||||||||||| |
Sbjct 1 ATGAGTAAGAAGGATTCAGTATTTCAGTCGCAAGCGGATGATTTCTCTGGTGGCTTTGAA 60
Query 61 TTTGGAGCCGAAGACGAGGATTTTATGATTGACATTGACGCGATTTATAGGATTCTTGAT 120
||||||||||| ||||||||||||||||||||||| || ||||||||| ||||||| |||
Sbjct 61 TTTGGAGCCGACGACGAGGATTTTATGATTGACATAGAGGCGATTTATCGGATTCTGGAT 120
Query 121 GAGAAG-CCTGATTCTATGGAGGTTAGTGAAGAAAAT-ATGACTCAAGTTGGTTCATATG 178
|| ||| |||| |||||||||||||||| ||| |||| ||| ||| |||||||||| ||
Sbjct 121 GA-AAGCCCTGTTTCTATGGAGGTTAGTCAAG-AAATAATGTCTCCGGTTGGTTCATCTG 178
Query 179 CT-GTAGAGTCTGACGAGCTTACGAACACACTGACGCAAAGTGGATCTCAGGCCACTGGT 237
| |||||||||| |||| ||| ||||||||||| ||||| |||||||||||||||||
Sbjct 179 -TGGTAGAGTCTGGCGAGTTTAGGAACACACTGATGCAAA---GATCTCAGGCCACTGGT 234
Query 238 TGGTTTCCTTACCCGGATTTGTATGGTCCTGAAGCCTCACAAAGTGAAACAGCAGTGCAA 297
||||||||||||| |||||||||||||| || ||||||||||||||||| ||||| || |
Sbjct 235 TGGTTTCCTTACCGGGATTTGTATGGTCTTGGAGCCTCACAAAGTGAAATAGCAGAGCCA 294
Query 298 AGTTCATTTGCTGACCCAGAGAATGGAGGATTGGGACCAAGTGCGACTTGTT-TCTCTGA 356
||||||||| ||||||| ||||||||| ||||||||| |||||||||||||| | |||||
Sbjct 295 AGTTCATTTTCTGACCCTGAGAATGGACGATTGGGACTAAGTGCGACTTGTTAT-TCTGA 353
Query 357 CTATGGTGGCAATGTGGTCTCCTATCCTGTGAATTGTGAAGATGGCAATGTATCCAACCT 416
||| ||||||||||||||||||| |||||| |||||||||||||||| |||||||| |||
Sbjct 354 CTACGGTGGCAATGTGGTCTCCTTTCCTGTAAATTGTGAAGATGGCACTGTATCCATCCT 413
Query 417 GTATGACATGAGAATTGATTCCAAATTTACACCTTGCAGTTCCACTATGATGACTCCCTA 476
| |||||||||||||||| ||||||||||||||||||||| |||||| ||||||| ||||
Sbjct 414 GGATGACATGAGAATTGAATCCAAATTTACACCTTGCAGTCCCACTACGATGACTACCTA 473
Query 477 TTTCAATACCATGCCTGGAAATGACTCAGGAATTGGAGCTACGCAAAATTCCTCCCTGGT 536
| |||||| |||||||||||||||||||||||||||||| ||||||||||| |||||| |
Sbjct 474 TCTCAATAACATGCCTGGAAATGACTCAGGAATTGGAGCCACGCAAAATTCTTCCCTGAT 533
Query 537 GTCTCATTTC-CATTATAATTACAGTTCTATTATTGATTGTGCCTCTTCTGAACCATATG 595
|||||||||| | ||||| |||||||||| | || |||||||| |||||||||||||
Sbjct 534 GTCTCATTTCTC-CCCTAATTCCAGTTCTATTGTGGACTGTGCCTCCTCTGAACCATATG 592
Query 596 GCCACCATACAATGGATGCACCCTTATCAGAAGTTTCCCCCAATTTGGTTCCAGGTTACG 655
||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||
Sbjct 593 GCCACCATACAATGGATGCACCCTTATCAGAAGTTTCTCCCAATTTGGTTCCTGGTTACG 652
Query 656 CATTTCAGTTCTTTCCCAATAAGGAAGAACTTATAAATGATTTGAAGAGTGCGTTTATCC 715
||||||||||||||||||| || |||||||| ||||||| ||||||| || ||||||||
Sbjct 653 CATTTCAGTTCTTTCCCAAGAAAGAAGAACTGCTAAATGACTTGAAGAATGAGTTTATCC 712
Query 716 ACTGTCAGTCAGATGGTGCAAGCCGGATGGTTTTTGACAAACATGTAGGATTTGATAATG 775
|||||||||| |||||||||||||| ||||||||||| | |||||||||||| ||||| |
Sbjct 713 ACTGTCAGTCGGATGGTGCAAGCCGAATGGTTTTTGATAGACATGTAGGATTCGATAACG 772
Query 776 GAACTTCGGAGAGGAATTCTGGGCCTGATGTGAGCAGTGAAAGAGAACTCAGCATCAAAT 835
||||||| ||||||||||||||||||||||| ||||||||||||||||||||| ||||||
Sbjct 773 GAACTTCAGAGAGGAATTCTGGGCCTGATGTAAGCAGTGAAAGAGAACTCAGCCTCAAAT 832
Query 836 ATGAAATCATTCCTTCAGTTTCCCCTGCCTGTGTCAATCCATACAATAGTTTTGATGGGC 895
|||||||||||||||||||||||||| ||||||||| |||||||| |||| |||||| |
Sbjct 833 GTGAAATCATTCCTTCAGTTTCCCCTGTCTGTGTCAAACCATACAACAGTTCTGATGGTC 892
Query 896 ATCAAGTTGATAAGGAGCTTGAGCAGCCTTCCAATTGTTCAAGCAGTTTTCAGGAGAATG 955
|||||||||| |||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 893 ATCAAGTTGAAAAGGAGCTTGAGCAGCCTGATAATTGTTCAAGCAGTTTTCAGGAGAAT- 951
Query 956 A-AGCAGTCCCTGTGAAGGTTAAACCAGAGCTTGAC-CTGGAGAACACGGTTTTCAGTAC 1013
| |||||||| | ||||||||||||||||||||| | ||||||||||||||| |||| |
Sbjct 952 AGAGCAGTCCATATGAAGGTTAAACCAGAGCTTG-CGTTGGAGAACACGGTTTACAGTTC 1010
Query 1014 AGTTCCTGGGAACTATAGTATATGTAGTGATGTTCATACAGTTGGAGGAACGACACTGCA 1073
| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 1011 AATTCCTGGGAACTATAGTAGATGTAGTGATGTTCATACAGTTGGAGGAACGACACTGCC 1070
Query 1074 ATGGTCTGGTGTCTCTAATTGCGCAATCTCCTATCAGGCAGATGTCGGGAAAGAATACCC 1133
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 1071 ATGGTCTGGTGTCTCTAATTGCGCAATCTCCTATCAGACAGATGTCGGGAAAGAATACCC 1130
Query 1134 ATCTATCCCACCTCAGACTGCTTTCCCTGGTCAAGATATTGACGGCAGGAGCTTCTATAA 1193
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1131 TTTTATCCCACCTCAGACTGCTTTCCCTGGTCAAGATATTGACGGCAGGAGCTTCTATAG 1190
Query 1194 TTGTTTTGTTTCAGATGACTGTTTGCAAAACGTAACAGATCCTGACCCAGCAACATCACG 1253
|||||||| ||||||||||||||| ||||||||||||||||||||||||| |||||||||
Sbjct 1191 TTGTTTTGATTCAGATGACTGTTTTCAAAACGTAACAGATCCTGACCCAGAAACATCACG 1250
Query 1254 CACTGAGTCTTTGGATTATCTGGTAGGAGACGAGGACCATGAATATATTGGGAGGACAGG 1313
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |
Sbjct 1251 CACTGAGTCTTTGGATTATCTGGTAGGAGACGAGGACCATGAATATATTAAGAGGACATG 1310
Query 1314 CTTTAATCTTTCTAGTCTCAGCTCTGGAACAGTTGAAAGTCTTTCATCAAAACGTATACC 1373
|||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||
Sbjct 1311 CTTTAATCTTTCTAGTTTCAGCTCTGGAACAGTTGAAAGTCTTTCATCAAAACGAATACC 1370
Query 1374 CGAAGGAGATGATGATTCTGAAATCCATAAAATAGAATCCTATGGTGAATTTGTTAATCC 1433
|||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1371 CGAACGAGAAGATGATTCTGAAATCCATAAAATAGAATCCTATGGTGAATTTGTTAATCC 1430
Query 1434 ACACCAATATCTAGCTGTGCAGAGACCAGTGTTTTCTTCAGAACATTCTACAGGTAGTCA 1493
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1431 ACACCAATATCTACCTGTGCAGAGACCAGTGTTTTCTTCAGAACATTCTACAGGTAGTCA 1490
Query 1494 AACTCTTAATAACTGTGGAGGCTTGAAGTTTGAGTCAAACAAGGGAAACATGAATTTTCA 1553
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1491 AACTCTTAATAATTGTGGAGGCTTGAAGTTTGAGTCAAACAAGGGAAACATGAATTTTCA 1550
Query 1554 TGCAGACTTGCAGGTTCTTTCTCAGCCTCGTTCTGAAGCAAGTCCTCCTGAAGGTGTCTT 1613
|||||||||||||| ||||||||||| | |||||||||||||||||||||| ||||||||
Sbjct 1551 TGCAGACTTGCAGGATCTTTCTCAGCATAGTTCTGAAGCAAGTCCTCCTGACGGTGTCTT 1610
Query 1614 GGCAGTCTCGCTTCTTAGACATCAGCGGATTGCATTGGCGTGGATGTCCGAAAAGGAGAC 1673
|||||| |||||||||||||||||||| ||||||||| ||||||||||| ||||||||||
Sbjct 1611 GGCAGTGTCGCTTCTTAGACATCAGCGTATTGCATTGTCGTGGATGTCCCAAAAGGAGAC 1670
Query 1674 AAGCGGGAACCCCTGTTTTGGGGGGATTCTTGCTGATGATCAGGGACTTGGAAAAACAGT 1733
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 1671 AAGCGGGAACCCCTGTTTTGGGGGCATTCTTGCTGATGATCAGGGACTTGGAAAAACAGT 1730
Query 1734 TTCCACAATAGCGCTTATACTGACAGAACGGTCTACACCTTATCTACCATGTGAAGAAGA 1793
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1731 TTCCACAATAGCGCTTATACTGACAGAACGGTCTACACCTTATCTACCATGTGAAGAAGA 1790
Query 1794 TTCAAAGAATGGAGGAAGCAATCAATTTGATCACTCTCAAGTGGTTTTCAATGAAAACAA 1853
|||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||
Sbjct 1791 TTCAAAGAATGGAGGATGCAATCAATCTGATCACTCTCAAGTGGTTTTCAATGAAAACAA 1850
Query 1854 AGTCGGCGAAGATAGTTTATGCAAGATGAGGGGAAGGCCAGCTGCTGGAACTCTTATTGT 1913
||| | ||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 1851 AGTTGTCGAAGATAGTTTATGCAAGATGAGGGGAAGGCCAGCTGCCGGAACTCTTATTGT 1910
Query 1914 CTGTCCCACTAGTCTGATGAGACAATGGGCTGATGAATTATGCAAGAAGGTTACTCTTGA 1973
||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 1911 CTGTCCCACTAGTTTGATGAGACAATGGGCTGATGAATTACGCAAGAAGGTTACTCTTGA 1970
Query 1974 AGCAAATCTATCTGTTCTGGTGTACCACGGCTGCAACAGAACAAAGGATCCTCACGAGCT 2033
|||| |||| ||||| ||||| |||||||| |||| ||||||||||||||||||||||||
Sbjct 1971 AGCACATCTCTCTGTGCTGGTATACCACGGTTGCAGCAGAACAAAGGATCCTCACGAGCT 2030
Query 2034 AGCTAAATATGATGTTGTCATTACCACATATTCCCTTGTGAGC 2076
||||||||||||||| |||||||||||||||||||||||||||
Sbjct 2031 AGCTAAATATGATGTCGTCATTACCACATATTCCCTTGTGAGC 2073
Score = 2828 bits (1531), Expect = 0.0
Identities = 1751/1857 (94%), Gaps = 16/1857 (1%)
Strand=Plus/Plus
Query 2077 AAGAGGAAACATATGGATTGTGAACCTGTTGAGTTTCTGTCTGGCCCTCTCGCGCAAGTT 2136
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2206 AAGAGGAAACATATGGATTGTGAACCTGTTGAGTTTCTGTCTGGCCCTCTCGCGCAAGTT 2265
Query 2137 TCATGGTATAGAGTTGTTCTTGATGAAGCTCAGAGCATTAAGAATTACAAAACCCAAGCT 2196
||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 2266 TCATGGTTTAGAGTTGTTCTAGATGAAGCTCAGAGCATTAAGAATTACAAAACCCAAGCT 2325
Query 2197 TCAACGGCATGTTCAGGCCTTCATGCTAAGCGTAGGTGGTGTTTGTCTGGCACTCCTATC 2256
|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2326 TCAATAGCATGTTCAGGCCTTCATGCTAAGCGTAGGTGGTGTTTGTCTGGCACTCCTATC 2385
Query 2257 CAGAATTCAATTGATGACCTCTACAGCTACTTCAGATTCCTTAAGTATGATTCTTATTCT 2316
||||||||||||| |||||||||||||||||||||||| |||||||||||| ||||||||
Sbjct 2386 CAGAATTCAATTGCTGACCTCTACAGCTACTTCAGATTTCTTAAGTATGATCCTTATTCT 2445
Query 2317 TGCTACCAAACATTTTGTGAAACGATTAAGAACCCAATCAGTAGCTACCCGGTGAAAGGA 2376
|||||||||| ||||||||||||||||||||||| |||||||||||||||| | |||||
Sbjct 2446 AGCTACCAAACGTTTTGTGAAACGATTAAGAACCCCATCAGTAGCTACCCGGGGGAAGGA 2505
Query 2377 TATCAAACGTTGCAGGCTATCCTGaaaaaaaTAATGCTTAGACGAACTAAAGATACACTT 2436
||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 2506 TATAAAACGTTGCAGGCTATCCTGAAAAAAGTAATGCTTAGACGAACTAAAGATACACTT 2565
Query 2437 CTTGATGGAAAACCGGTAATCTCTTTACCTCCGAAGTCCATTGAGCTGAGGAGAGTGGAC 2496
|| ||||||||||| || ||||||||||||||||||||||| ||| ||||||||||||||
Sbjct 2566 CTCGATGGAAAACCCGTGATCTCTTTACCTCCGAAGTCCATCGAGTTGAGGAGAGTGGAC 2625
Query 2497 TTTACCAAGGAAGAACGTGATTTCTACTCAAAACTAGAGTGCGACTCTCGTGACCAATTC 2556
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2626 TTTACCAAGGAAGAACGTGATTTCTACTCAAAACTAGAGTGCGACTCTCGTGACCAATTC 2685
Query 2557 AAGGAATATGCAGAAGCTGGAACGGTGAAGCAAAATTATGTAAATATTTTGTTGATGTTG 2616
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 2686 AAGGAATATGCAGAAGCTGGAACGGTGAAGCAAAATTATGTAAATATTTTGTTGATGCTG 2745
Query 2617 CTGCGTCTTCGTCAAGCGTGTGGTCACCCTCTTCTGGTATCCAGTTTGGCATGGTCATCC 2676
||||||||||||||||| ||||| ||||||||||| |||||||||||| |||||||||||
Sbjct 2746 CTGCGTCTTCGTCAAGCTTGTGGCCACCCTCTTCTAGTATCCAGTTTGTCATGGTCATCC 2805
Query 2677 TCAGCTGAAATGGCTAAAAAGCTTCCATATGAGAAGCTAACCTTTCTTCTGCATAGCTTA 2736
||||||||||||| ||| |||||||||||||||||||||||||||||||||||| |||||
Sbjct 2806 TCAGCTGAAATGGTTAAGAAGCTTCCATATGAGAAGCTAACCTTTCTTCTGCATCGCTTA 2865
Query 2737 GAAGCTTCACTGGCATTTTGTGGTATCTGCAATGGTGCACCTAAAGATGCTGTTGTTTCA 2796
||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||
Sbjct 2866 GAAGCTTCACTGGCAATTTGTGGTATCTGCAATGTTGCACCTAAAGATGCTGTTGTTTCA 2925
Query 2797 GTCTGTGGTCACGTTTTCTGTAAACAGTGCATTTATGAATGCCTTACTCACGACAATAAT 2856
|||||||||||||||||||||| |||||||||| ||||| ||||||| ||| ||||||
Sbjct 2926 CTCTGTGGTCACGTTTTCTGTAATCAGTGCATTTGCGAATGTCTTACTCGCGATAATAAT 2985
Query 2857 CAATGCCCACTGTCACT-CTGCAAAGTCGGAGTTGAAATTTCATCATTATTTTCCAGAGA 2915
||||||||||||||| | ||||||||||||| ||||||||||||||||||||||||||||
Sbjct 2986 CAATGCCCACTGTCA-TACTGCAAAGTCGGACTTGAAATTTCATCATTATTTTCCAGAGA 3044
Query 2916 AACACTGGAAAATGCTATGCTTGGCTTGCATAAACTTGATGCTCCATGTGATCGTACCAC 2975
||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||
Sbjct 3045 AACACTGGAAAATGCTATGCTTGACTTGCATAAACTTGATGCCCCATGTGATCGTACCAC 3104
Query 2976 TTCAGATCCTGTTGGGAGTGGTGAGCCTTGTATTGAAAATTTACCATGTCGTTCATCCAA 3035
||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||
Sbjct 3105 TTCAGATCCTGTTGGGAGTGGTGAGCCTTGT---GAAAATTTACCATGTGGTTCATCCAA 3161
Query 3036 AATCAAGGCTGCTCTAGATATCTTGCAATCACTGAGCAGACCACAGAGTCC-GACGACTG 3094
||||||||||||||||||||||||||||||||||||||||||||||||||| | |||| |
Sbjct 3162 AATCAAGGCTGCTCTAGATATCTTGCAATCACTGAGCAGACCACAGAGTCCCG-CGACAG 3220
Query 3095 TAATGAATGATGTGGATCAGAGCTCCGAAAATGGAGAGAAGAATCAGCAGCTTGAGAGGT 3154
|||||||||||||| ||||||||||||||||||||||||| |||||||||||||| | ||
Sbjct 3221 TAATGAATGATGTGAATCAGAGCTCCGAAAATGGAGAGAATAATCAGCAGCTTGACAAGT 3280
Query 3155 CATTCAGTTTACCTGCAACTCCAGCGAAGAGTAGCGTGGATGGTCTGGTTAAGGTAGTTG 3214
|||||||||||||||||||||||||||||||||| |||| |||| ||||||| |||| ||
Sbjct 3281 CATTCAGTTTACCTGCAACTCCAGCGAAGAGTAGTGTGGGTGGTGTGGTTAATGTAGCTG 3340
Query 3215 GAGAAAAGGCCATTGTGTTTACCCAATGGACAAAGATGCTGGATCTGCTTGAAGCTGGTC 3274
||||||| ||||||||||||||||||||||||||||||||||| || |||||||||||||
Sbjct 3341 GAGAAAAAGCCATTGTGTTTACCCAATGGACAAAGATGCTGGACCTCCTTGAAGCTGGTC 3400
Query 3275 TTAAGAGTTCGGGTATTCAGTATAGAAGGTTTGATGGGAAAATGACGGTACCAGCTAGAG 3334
|||||||||| |||||||||||||||||||||||||| |||||||| ||||||||| |||
Sbjct 3401 TTAAGAGTTCAGGTATTCAGTATAGAAGGTTTGATGGAAAAATGACAGTACCAGCTCGAG 3460
Query 3335 ATGCAGCAGTA-AGAGATTTTAATACTCTCCCTGAGGTGTCTGTAATGATAATGTCTCTC 3393
||||||||||| | ||||||||||||||||||||| || |||||||||||||||||||||
Sbjct 3461 ATGCAGCAGTACA-AGATTTTAATACTCTCCCTGATGTTTCTGTAATGATAATGTCTCTC 3519
Query 3394 AAAGCTGCTAGTCTTGGGCTAAATATGGTTGCTGCTTGTCATGTTATAATGTTGGACTTA 3453
||||||||||||||||||||||||||||| || |||||||||||||| ||| ||||||||
Sbjct 3520 AAAGCTGCTAGTCTTGGGCTAAATATGGTGGCAGCTTGTCATGTTATCATGCTGGACTTA 3579
Query 3454 TGGTGGAACCCGACTACAGAAGACCAGGCAATTGACAGAGCCCACCGTATTGGACAGACA 3513
||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||
Sbjct 3580 TGGTGGAACCCGACTACAGAAGATCAGGCAATTGACAGAGCACACCGTATTGGACAGACA 3639
Query 3514 CGACCAGTAAAAGTGGTGCGGTTCACAGTAAAAGATACAGTTGAAGATCGCATATTGGCC 3573
||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 3640 CGACCAGTAAAGGTGGTGCGCTTCACAGTAAAAGATACAGTTGAAGATCGCATATTGGCC 3699
Query 3574 CTCCAGCAAAGGGAGAGAATGATGGTGGCTTCTGCATTCGGAGAACATGAAAAGGGTAGT 3633
|||||||||| | |||||| ||||||||||||||||||||||||||||||||| ||||||
Sbjct 3700 CTCCAGCAAAAGAAGAGAAAGATGGTGGCTTCTGCATTCGGAGAACATGAAAACGGTAGT 3759
Query 3634 CGAGAATCACATCTCTCTGTGGAGGATTTGAACTATCTGTTCATGGCATGAGAGGTCGAT 3693
|||||||| ||||||||||||||||||||||| ||||||||||||||||||||| |||||
Sbjct 3760 CGAGAATCGCATCTCTCTGTGGAGGATTTGAATTATCTGTTCATGGCATGAGAGCTCGAT 3819
Query 3694 CCAATCGAAAGCTTTTCTGACAAACTCAGGTACATATATA--GGATTT-CCGGGTTTGTG 3750
||||| ||| ||| |||||||||||||||||||||||||| |||||| |||||||||||
Sbjct 3820 CCAATTGAA-GCTCTTCTGACAAACTCAGGTACATATATATAGGATTTTCCGGGTTTGTG 3878
Query 3751 CAGTTCAACAGCAGAAGAAATCTTTGGAACTAATTACA-GTTATGTGCAAAGAAGGAAGT 3809
||||| | |||||||||||||||| |||| ||| ||| ||| | ||||||||||||| |
Sbjct 3879 CAGTTTATTAGCAGAAGAAATCTTTTGAACCAAT-ACAAGTT-TATGCAAAGAAGGAACT 3936
Query 3810 AGAAAAAGATTAGCTTTGCCCTGTGTATATAGAATGAAATTGAACATTATCAAGAAAAAT 3869
||||||||||||||||||| ||||||||||||||||||| |||| ||||||||||||||
Sbjct 3937 AGAAAAAGATTAGCTTTGCTCTGTGTATATAGAATGAAACTGAATATTATCAAGAAAAAC 3996
Query 3870 CTGCAAGAACAATGTGTACATCAATTTCTAGTCACTTAATCCAAATACTGTTCCATG 3926
||||||||||||||||||||||||||||||||||||||||||||| | | |||||||
Sbjct 3997 CTGCAAGAACAATGTGTACATCAATTTCTAGTCACTTAATCCAAACATTTTTCCATG 4053
> AT1G61140.1 | Symbols: EDA16 | SNF2 domain-containing protein
/ helicase domain-containing protein / zinc finger protein-related
| chr1:22534717-22540850 REVERSE LENGTH=4404
Length=4404
Score = 564 bits (305), Expect = 3e-159
Identities = 476/557 (85%), Gaps = 18/557 (3%)
Strand=Plus/Plus
Query 2104 GTTGAGTTTCTGTCTGGCCCTCTCGCGCAAGTTTCATGGTATAGAGTTGTTCTTGATGAA 2163
||||||||||||||||||||||| ||| |||||||||||| |||||||||||| |||||
Sbjct 2563 GTTGAGTTTCTGTCTGGCCCTCTTGCGAAAGTTTCATGGTTTAGAGTTGTTCTAGATGAG 2622
Query 2164 GCTCAGAGCATTAAGAATTACAAAACCCAAGCTT-CAACG-GCATGTTCAGGCCTTCATG 2221
|| ||||||||||| |||||||||||||||| || ||| | ||||| | ||||||| ||
Sbjct 2623 GCACAGAGCATTAAAAATTACAAAACCCAAG-TTGCAA-GAGCATGCTGGGGCCTTCGTG 2680
Query 2222 CTAAGCGTAGGTGGTGTTTGTCTGGCACTCCTATCCAGAATTCAATTGATGACCTCTACA 2281
|||| || ||||||||||||||||||||||| |||||||||||||| |||||||| ||||
Sbjct 2681 CTAAACGGAGGTGGTGTTTGTCTGGCACTCCAATCCAGAATTCAATCGATGACCTTTACA 2740
Query 2282 GCTAC-TTCAGATTCCTTAAGTATGATTCTTATTCTTGCTACCAAACATTTTGTGA-AAC 2339
||||| ||| ||||||| || |||||| |||| |||| |||| | || ||| | ||
Sbjct 2741 GCTACTTTC-GATTCCTCAAATATGATCCTTACTCTTCCTACGTATTGTTCTGT-AGCAC 2798
Query 2340 GATTAAGAACCCAATCAGTAGCTACCCGGTGAAAGGATATCA-AACGTTGCAGGCTATCC 2398
|||||||||||| || | ||| |||| |||||||||||||| || | ||||||||||||
Sbjct 2799 GATTAAGAACCCTATAACTAGGAACCCAGTGAAAGGATATCAGAA-GCTGCAGGCTATCC 2857
Query 2399 TGaaaaaaaTAATGCTTAGACGAACTAAAGATACACTTCTTGATGGAAAACCGGTAATCT 2458
| |||| | | |||||| | |||||||||| | ||||||||||||| ||||| ||||||
Sbjct 2858 TTAAAACAGTGATGCTTCGCCGAACTAAAGGTTCACTTCTTGATGGGAAACCCATAATCT 2917
Query 2459 CTTTACCTCCGAAGTCCATTGAGCTGAGGAGAGTGGACTTT-ACCAAGGAAGAACGTGAT 2517
||||||||||||||||||||||| |||| | |||||| ||| || ||| |||||||||
Sbjct 2918 CTTTACCTCCGAAGTCCATTGAGTTGAGAAAAGTGGA-TTTCACTGTGGAGGAACGTGAT 2976
Query 2518 TTCTACTCAAAACTAGAGTGC-GACTCTCGTGAC-CAATTCAAGGAATATGCAGAAGCTG 2575
|||||||| ||||||||| || || |||||| || ||||||| |||||||||||||||||
Sbjct 2977 TTCTACTCCAAACTAGAG-GCTGAATCTCGT-ACTCAATTCAGGGAATATGCAGAAGCTG 3034
Query 2576 GAACGGTGAAGCAAAATTATGTAAATATTTTGTTGATGTTGCT-GCGTCTTCGTCAAGCG 2634
|||| ||||||||||||||||||||||| ||||||||| | || ||| ||||| |||||
Sbjct 3035 GAACAGTGAAGCAAAATTATGTAAATATCTTGTTGATGCT-CTTGCGCCTTCGCCAAGCT 3093
Query 2635 TGTGGTCACCCTCTTCT 2651
|||| ||||||||||||
Sbjct 3094 TGTGATCACCCTCTTCT 3110
> AT1G11090.1 | Symbols: | alpha/beta-Hydrolases superfamily protein
| chr1:3702608-3703779 FORWARD LENGTH=1172
Length=1172
Score = 132 bits (71), Expect = 3e-29
Identities = 83/89 (93%), Gaps = 0/89 (0%)
Strand=Plus/Minus
Query 3838 ATAGAATGAAATTGAACATTATCAAGAAAAATCTGCAAGAACAATGTGTACATCAATTTC 3897
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Sbjct 1172 ATAGAATGAAACTGAATATTATCAAGAAAAACCTGCAAGAACAATGTGTACATCAATTTC 1113
Query 3898 TAGTCACTTAATCCAAATACTGTTCCATG 3926
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Sbjct 1112 TAGTCACTTAATCCAAACATTTTTCCATG 1084
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 195600910757
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5