BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg471247 Length=1141 Score E Sequences producing significant alignments: (Bits) Value AT1G11125.1 | Symbols: | unknown protein; BEST Arabidopsis tha... 1206 0.0 AT1G11120.1 | Symbols: | unknown protein; BEST Arabidopsis tha... 427 1e-118 AT1G61170.1 | Symbols: | unknown protein; FUNCTIONS IN: molecu... 148 9e-35 > AT1G11125.1 | Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G61170.1). | chr1:3718783-3719711 FORWARD LENGTH=929 Length=929 Score = 1206 bits (653), Expect = 0.0 Identities = 766/821 (93%), Gaps = 6/821 (1%) Strand=Plus/Plus Query 324 CTCCGCCACCGCCGACAAGAAAGATGATCCTGTCTCCGGCAAGAACACCGCACCACCTCC 383 ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct 81 CTCCGCCACCGCCGACAAGAAAGATGATCCTGTCTCCGGCAAGAACACCGCACGGCCTCC 140 Query 384 ATCAGTTGTCGATGAAGAGACAGTAGTCAAAGAAGTCTTGTCCGAAACTACATTGCTCAC 443 ||| ||| |||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 141 ATCTGTTATCGATGAAGAGACAGTAGTCAAAGAAGTCTTGTCCGAAACCACATTGCTCAC 200 Query 444 TTCCTCTAACGACAATTCGACGGTGGATAAGA-TGACGACGACAAAGATTCAAGAAGATG 502 ||||||||||||||||||||||||||| |||| | ||| |||||||||||||||||| | Sbjct 201 TTCCTCTAACGACAATTCGACGGTGGAGAAGACT-ACGTTGACAAAGATTCAAGAAGAAG 259 Query 503 AGGAGAAGAAACCCGGAATTGTTGTCGACGTAGCTCAAGAACCGGTTTTGACCAAGCCCG 562 |||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||| Sbjct 260 AGGAGAAGAAACCCGGGATTGTTGTCGACGTTGCTCAAGAACCGGTTTTGACCAAGCCCA 319 Query 563 GTACGATTGAACCCGAAAAAGGATCGGAGGTTTCGGAGATTTGTAGTTTAAGCGAGAGTT 622 || | ||||||| ||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 320 GTTTGGTTGAACCGGAAAAAGGATCGGAGGTTTCGGAGAATTGTAGTTTAAGCGAGAGTT 379 Query 623 TGCTTTCGATCGTGAATGGA-TACGACGAGGGAGAAGTGCAA-CAGATGAAATCTCAGGT 680 ||||||||||||||||| | |||||||||| ||||||| || |||||||||||||| || Sbjct 380 TGCTTTCGATCGTGAAT-AAGTACGACGAGGAAGAAGTG-AAGCAGATGAAATCTCATGT 437 Query 681 AGTGAGACAGAGATCTCCGGCGAAATCTCGGAACCGGGTCATGGTTAGTTATCCAAACCG 740 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 438 AGTGAGACAGAGATCTCCGGCGAAATCTCGGAACCGGGTCATGGTTAGTTATCCAAACCG 497 Query 741 GAGAACCGATATGTCTCCTCGTAAGAGACACTCCGAAGAAGAAGCTGGCTCGGTAAGGCT 800 |||||||||||||||||| ||||||||| || ||||||||||||||||||||| ||||| Sbjct 498 GAGAACCGATATGTCTCCACGTAAGAGAAACAACGAAGAAGAAGCTGGCTCGGTGAGGCT 557 Query 801 GGTTCCGCCGGGTACGGGTAAGAGAGACCCGACTGAAAGATCCGAGAGAAGGTCAAGGTC 860 ||||||| ||| |||||||| ||||||| ||||||||||||||||||||||||| || || Sbjct 558 GGTTCCGTCGGCTACGGGTACGAGAGACTCGACTGAAAGATCCGAGAGAAGGTCTAGATC 617 Query 861 GCCGGCGATGAACAGGTCCGTCATGATGGGCCCAACTCGGAGTCAACAAAGTACGGACAG 920 |||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||| Sbjct 618 GCCGGCGATGAACAGGTCCGTCATGATGGGCCCAACTCGGAGTCAACAGAGTACAGACAG 677 Query 921 TTGTGGAGCAATGAGGAGACAAAATCAGTCTCCGGGTCGGGTCAGACTTGATCCGAAGAA 980 ||||||||||||||||||||||| ||||||||||||||||||||||| ||||||| | Sbjct 678 TTGTGGAGCAATGAGGAGACAAAGCCAGTCTCCGGGTCGGGTCAGACTCAATCCGAATAT 737 Query 981 GAACGGGTCGGAACAAGATTGTAATCATCACCAGTGGCCGGGTTCTGTCGGGAATTACAA 1040 |||||||||||| ||||| |||||||||||| |||||||||||||| | || |||||||| Sbjct 738 GAACGGGTCGGATCAAGAGTGTAATCATCACAAGTGGCCGGGTTCTATTGGAAATTACAA 797 Query 1041 TTCTACCCCTAACGACTCGTTTGAGAACCCTCTTGTTTCATTAGAGTGTTTCATCTTTCT 1100 |||| |||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 798 TTCTGCCCCTAACGACTCGTTTGAGAACCCTCTTGTTTCATTAGAGTGTTTCATCTTCCT 857 Query 1101 ATGAGATAATGTATCTTATTATCGAATTGTCGCCGGAATTT 1141 ||||||||||||||||||||| |||||| |||||||||||| Sbjct 858 ATGAGATAATGTATCTTATTACCGAATTATCGCCGGAATTT 898 > AT1G11120.1 | Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G09812.1); Has 270 Blast hits to 255 proteins in 62 species: Archae - 0; Bacteria - 2; Metazoa - 93; Fungi - 14; Plants - 126; Viruses - 0; Other Eukaryotes - 35 (source: NCBI BLink). | chr1:3715184-3717320 FORWARD LENGTH=609 Length=609 Score = 427 bits (231), Expect = 1e-118 Identities = 255/267 (96%), Gaps = 0/267 (0%) Strand=Plus/Plus Query 1 ATGAGAGACCTTGAGCACTTAAAGACTAACCTGAATCATCCATGGCCACCTATCGGAGCT 60 |||||||||||||||||||||||||| ||||| || |||| ||||||||||||||||||| Sbjct 46 ATGAGAGACCTTGAGCACTTAAAGACGAACCTCAACCATCAATGGCCACCTATCGGAGCT 105 Query 61 CCGATGAATCTCCGGCGAGAAGAGCCATGGAAATCTCAATTCGACGACTCAGTTAACGCT 120 |||||||||||||||||||||||||| ||||||||||| ||||| ||||||||||||||| Sbjct 106 CCGATGAATCTCCGGCGAGAAGAGCCGTGGAAATCTCAGTTCGATGACTCAGTTAACGCT 165 Query 121 GTCTCCTTTGGATTCGTTGCTACAGCTATTCTCATCTCTATGTTCCTCGTCATGGCTATC 180 ||||||||||||||||| || || |||||||||||||||||||||||||||||||||||| Sbjct 166 GTCTCCTTTGGATTCGTCGCAACGGCTATTCTCATCTCTATGTTCCTCGTCATGGCTATC 225 Query 181 TTCGAGAGACTGATTCGGACAACCACTACTTCAACTACTAACTCAGATTCCTCTTCAAGT 240 ||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 226 TTCGAGAGACTCATTCGTACAACCACTACTTCAACTACTAACTCAGATTCCTCTTCAAGT 285 Query 241 CGGGTCCTTCCGGGTATGGATTCTCGG 267 ||||||||||||||||||||||||||| Sbjct 286 CGGGTCCTTCCGGGTATGGATTCTCGG 312 Score = 102 bits (55), Expect = 7e-21 Identities = 57/58 (98%), Gaps = 0/58 (0%) Strand=Plus/Plus Query 266 GGATGACTGTTTACTCAAACGGGGTATCGGTATTGATGCCAGGAGATGATATCCCTAC 323 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 437 GGATGACTGTTTACTCAAACGGGGTATCTGTATTGATGCCAGGAGATGATATCCCTAC 494 > AT1G61170.1 | Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G11125.1); Has 54 Blast hits to 54 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 17; Fungi - 0; Plants - 34; Viruses - 1; Other Eukaryotes - 2 (source: NCBI BLink). | chr1:22549638-22550675 FORWARD LENGTH=1038 Length=1038 Score = 148 bits (80), Expect = 9e-35 Identities = 305/407 (75%), Gaps = 42/407 (10%) Strand=Plus/Plus Query 389 TTGTCGATGAAGAGACAGTAGTCAAAGAAGTCTTGTCCGAAACTACATTGCTCACT--T- 445 ||||||| ||||||||||||||||||||||||||||| || || || ||| ||||| | Sbjct 154 TTGTCGAAGAAGAGACAGTAGTCAAAGAAGTCTTGTCAGAGACAACCTTGTTCACTCCTT 213 Query 446 CCTCTAA---C-GACAATTCGACGGTGGATAAGAT--GACGACGACAAAGATTCAAGAAG 499 |||||| | | || ||||||| | | |||| | || ||| ||||| | ||||| Sbjct 214 CCTCTAGTTTCCG-CACTTCGACGTTC-A-AAGACCCGGTGAAGACCAAGATCCGAGAAG 270 Query 500 ATGAGGAGAAGAAACCCGGAATTGTTGTCGACGTAGCT-CAAGAACCGGTTTTGA-CCAA 557 |||||||||| |||||||| || ||| | | ||| || || |||||||||| || | Sbjct 271 ATGAGGAGAAAAAACCCGGT-TTCTTGAAAATG--GCTTCA-GACCCGGTTTTGATCCGA 326 Query 558 GCCCGGTACGATTGAACCCGAAAAAGGATCGGAGGTTTCGGAGATTTGTAGTTT-A---- 612 |||||| || |||| || ||| |||| || |||||||||||||||||||| || | Sbjct 327 -CCCGGTTCGGTTGATCCTGAAGAAGGCTCTGAGGTTTCGGAGATTTGTAGCTTGAGTTT 385 Query 613 -AGCGAGAGTTTG-CTTT--CGATCGTGA--A-TGGATACGACGAGGGAGAAGTGCAACA 665 ||||||||| || ||| || | |||| | ||| ||||| |||| | | ||| | Sbjct 386 GAGCGAGAGTGTGTCTTCAACGGTTGTGATGAATGGTTACGATGAGGAACATGTG-AT-- 442 Query 666 GATGAAATCTCAGGTAGTGAGACAGAGATCTCCGGCGAAATCTCGGAACCGGGTCAT-GG 724 ||||||| | ||| | | |||||||||||||||||| |||||| || ||||| || Sbjct 443 GATGAAA-CAGAGGAAATCT--CAGAGATCTCCGGCGAAAACTCGGACCCAGGTCACCGG 499 Query 725 T--TAGTTATCCAAACCGGAGAACCGAT-ATGTCTCCTCGTAAGAGA 768 | || |||||| | ||||||||| ||| | ||||| ||||||||| Sbjct 500 TAATAATTATCCGACCCGGAGAACTGATCAA-TCTCCACGTAAGAGA 545 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 55973607675 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5