BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg471250
Length=3716
Score E
Sequences producing significant alignments: (Bits) Value
AT1G11160.1 | Symbols: | Transducin/WD40 repeat-like superfami... 5297 0.0
AT1G61210.1 | Symbols: | Transducin/WD40 repeat-like superfami... 1158 0.0
> AT1G11160.1 | Symbols: | Transducin/WD40 repeat-like superfamily
protein | chr1:3733139-3739842 FORWARD LENGTH=3812
Length=3812
Score = 5297 bits (2868), Expect = 0.0
Identities = 3415/3669 (93%), Gaps = 77/3669 (2%)
Strand=Plus/Plus
Query 1 AAAaatctcttcttttctttctaagttcttctttaaatctttaatctcagcaggaagcaa 60
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 15 AAAAATCTCTTCTTTTCTTTCTAAGTTCTTCTTTAAATCTCTAATCTCAGCAGGAAGCAA 74
Query 61 tctctct-tGTCTCAAGTTTCTATTTTCTTAATCTCCGAGAAATCTTGAACTCTGTCTTG 119
||||| | |||||||||||||||||||| ||||||| ||||||||| ||||||||||||
Sbjct 75 TCTCT-TATGTCTCAAGTTTCTATTTTCCGAATCTCCCAGAAATCTTCAACTCTGTCTTG 133
Query 120 TCGTCTAGTCACATTTTGAATTTTTACACCA----C--CA-------G-CTCTCATTCTT 165
|||||||||||||||||||||||||| |||| | || | | | ||||||
Sbjct 134 TCGTCTAGTCACATTTTGAATTTTTAAACCAGCTCCGACATTTTTTTGTTTTTAATTCTT 193
Query 166 TTCGATTCATAACAAAGGCTGGAGATTTGGTTTCAGCTTCGTAATCGCATGAATCTACTG 225
|||||||||||||||||||||| ||||||| ||||||||| || ||||||||||||||||
Sbjct 194 TTCGATTCATAACAAAGGCTGGTGATTTGGCTTCAGCTTCCTAGTCGCATGAATCTACTG 253
Query 226 AAATCGAGTAGATGATGGCGAAGCGTGGATATAAGCTACAAGAGTTTGTGGCACATTCCG 285
|||||||||||| |||||||||||||||||||||||||| ||||||||||||||||| |
Sbjct 254 AAATCGAGTAGAAAATGGCGAAGCGTGGATATAAGCTACAGGAGTTTGTGGCACATTCTG 313
Query 286 GAAATGTGAATTGTCTAAGTATCGGAAAGAAGACGTCACGGCTCCTTCTAACTGGTGGAG 345
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 314 GAAATGTGAATTGTCTAAGTATCGGAAAGAAGACGTCACGGCTCCTTCTAACAGGTGGAG 373
Query 346 ATGATTATAAGGTCAACCTTTGGTCAATCGGCAAAACCACTTCGCTAATGAGTCTTTGTG 405
||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||
Sbjct 374 ATGATTATAAGGTCAACCTTTGGTCAATCGGCAAAACCACTTCTCCAATGAGTCTTTGTG 433
Query 406 GGCATACAAGCCCGGTTGATTCAGTAGCTTTTAACTCGGGAGAAATTTTGGTGCTCGGTG 465
||||||||||||||||||||||||||||||||||||| | |||| ||||||| |||| ||
Sbjct 434 GGCATACAAGCCCGGTTGATTCAGTAGCTTTTAACTCAGAAGAAGTTTTGGTACTCGCTG 493
Query 466 GAGCTTCTTCAGGTGTGATAAAGCTGTGGGATGTAGAAGAAGCAAAGATGGTTAGAGCTT 525
| |||||||||||||||||||||||||||||| |||||||| ||||||||||| ||||||
Sbjct 494 GGGCTTCTTCAGGTGTGATAAAGCTGTGGGATCTAGAAGAATCAAAGATGGTTCGAGCTT 553
Query 526 TTACTGGACACAGATCCAATTGTTCTGCTGTTGAGTTTCATCCATTTGGTGAATTTCTTG 585
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 554 TTACTGGACACAGATCCAATTGTTCTGCTGTTGAGTTTCATCCATTTGGTGAATTTCTTG 613
Query 586 CATCGGGATCTAGTGACACAAATCTAAGGGTTTGGGATACTAGAAAGAAGGGATGCATCC 645
||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||
Sbjct 614 CATCGGGATCTAGTGACACCAATCTAAGGGTTTGGGATACCAGAAAGAAGGGATGCATCC 673
Query 646 AAACATACAAGGGTCATACTTGCGGTATTAGCACTA-TCAGATTTAGTCCTGATGGTCGT 704
|||||||||||||||||||| |||| || ||||||| | | |||||| ||||||||||||
Sbjct 674 AAACATACAAGGGTCATACTCGCGGCATCAGCACTATTGA-ATTTAGCCCTGATGGTCGT 732
Query 705 TGGGTAGTGTCCGGAGGACTTGACAATGTTGTAAAGGTATGGGATTTGACTGCTGGAAAG 764
||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 733 TGGGTAGTGTCTGGAGGACTTGACAACGTTGTAAAGGTATGGGATTTGACTGCTGGAAAG 792
Query 765 CTTTTGCACGAATTTAAGTTTCATGAAGGACCTATCCGTTCGCTAGAATTCCATCCGCTT 824
|| ||||| || ||||||| ||||||||||||||| || || ||||| |||||||||||
Sbjct 793 CTATTGCATGAGTTTAAGTGTCATGAAGGACCTATTCGCTCCCTAGACTTCCATCCGCTG 852
Query 825 GAGTTTCTCCTAGCCACAGGTTCTGCTGACAGAACTGTGAAATTCTGGGATTTGGAAACG 884
||||||||| ||||||| |||||||||||||| |||||||||||||||||||||||||||
Sbjct 853 GAGTTTCTCTTAGCCACTGGTTCTGCTGACAGGACTGTGAAATTCTGGGATTTGGAAACG 912
Query 885 TTTGAACTGATTGGATCTACTAGACCAGAGGCTGCTGGAGTTCGTGCAATCGCTTTTCAT 944
||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 913 TTTGAACTGATTGGAACTACTAGACCAGAGGCTACTGGAGTTCGTGCAATCGCTTTTCAT 972
Query 945 CCAGATGGTCAAACCCTTTTCTGTGGATTGGATGATGGCTTGAAGGTTTATTCATGGGAA 1004
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 973 CCAGATGGTCAAACCCTTTTCTGTGGATTGGATGATGGCTTGAAGGTTTATTCATGGGAA 1032
Query 1005 CCAGTGATTTGCCGGGATGGTGTTGATATGGGATGGTCAACCCTTGGTGACTTCTGCATC 1064
||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||
Sbjct 1033 CCAGTGATTTGCCGGGACGGTGTTGATATGGGATGGTCAACACTTGGTGACTTCTGCATC 1092
Query 1065 AACGAAGGAAAGTTCATTGGTTGTTCATATTACCGAAATTCTGTTGGGATATGGGTTTCA 1124
|||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 1093 AACGAAGGAAAGTTTATTGGTTGCTCATATTACCGAAATTCTGTTGGGATATGGGTTTCA 1152
Query 1125 GATATATCGGAACTTGAGCCATATGGAGCAGTATCTGAGGATAAGAATGAATGCATGCTG 1184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 1153 GATATATCGGAACTTGAGCCATATGGAGCAGTATCTGAGGATAAGAATGAATGCATGGTG 1212
Query 1185 AAAAGATTCAGTGTCTTCAATGATCAGTCTGAGAGAGTGGGAAGTGGCCCAAGGGGCAGT 1244
|||||||| |||||||| |||||||||||||||||| ||||||||||||||||||||||
Sbjct 1213 AAAAGATTTAGTGTCTTGAATGATCAGTCTGAGAGAATGGGAAGTGGCCCAAGGGGCAGC 1272
Query 1245 GTATCCCCAGATAATGAGACAAAAGAGATAAAGAACATATACGTTGACTCCACAGGTGGA 1304
|||||||||||| ||||||||| ||||||||||||||||||||| |||||||||||||||
Sbjct 1273 GTATCCCCAGATTATGAGACAAGAGAGATAAAGAACATATACGTCGACTCCACAGGTGGA 1332
Query 1305 AATTCGAATGTAGCGCAAAATCCAGGATCTCTGAAAGCGACATTGCCTTTGGAATCAGGA 1364
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333 AATTTGAATGTAGCGCAAAATCCAGGATCTCTGAAAGCGACATTGCCTTTGGAATCAGGA 1392
Query 1365 AAAGTAGCTACTATGGCGAGCGAGAAGCAGAATGCAACATATTTTGGACAAGCAGGAGAT 1424
|||||||||||||||| ||||||||||||||||||| |||||||||||| |||||||||
Sbjct 1393 AAAGTAGCTACTATGGTGAGCGAGAAGCAGAATGCAGCATATTTTGGACCAGCAGGAGAC 1452
Query 1425 AAGTATTCTAGTATGCATACTGTTGCATCGCGGGATAGTGATAGTGGAGAGGAATCTTCT 1484
|||||||| || | || |||||||||||||||||||||||||||||||||||
Sbjct 1453 AAGTATTC---TA-G--TA------CATCGCGGGATAGTGATAGTGGAGAGGAATCTTCT 1500
Query 1485 TATTCAGAAAGGGAATCTATCACTTTCTCAAGAACTAAATCGGGTATGTTGCTAAGACCA 1544
||||||||||||||||||||| ||||||||||||| |||||||| |||||||||||||||
Sbjct 1501 TATTCAGAAAGGGAATCTATCCCTTTCTCAAGAACGAAATCGGGCATGTTGCTAAGACCA 1560
Query 1545 GCTCATGTAAGAAAGACGCTAGCAAAGTTTGAAGAATCAAAACAGTCAGCGGTTGTTCAA 1604
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1561 GCACATGTAAGAAAGACGCTAGCAAAGTTTGAAGAATCAAAACAGTCAGCGGTTGTTCAA 1620
Query 1605 TCTGCATCTCGGAAGAAAAGCGGATTGGCTGTTGAGGAGGAACCACAAACTCAAAATGTA 1664
|||||| |||| |||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 1621 TCTGCAACTCGAAAGAAAAGCGGATTGGCTGTTGAGGAGGAACCACAAACTCAAAACGCG 1680
Query 1665 CTTCTTTCAGAACAGAATGGTAGTAAACCTTTTGATGCTGAAGATTCTACCATCAAGGGT 1724
|||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||
Sbjct 1681 TTTCTTTCAGAACAGAATGCTAGTAAACCTTTTGATGCTGAAGATTCTATCATCAAGGGT 1740
Query 1725 ATTAC-AGACAAGTTTGAAAAAGGTTTATCATCGGAACCACCGACTGATGAAACGAATCG 1783
||||| | ||||||||||||||| |||||||||||||||||| ||||||||| |||||||
Sbjct 1741 ATTACTA-ACAAGTTTGAAAAAGCTTTATCATCGGAACCACCAACTGATGAAGCGAATCG 1799
Query 1784 TATGTTCCTTAAACCACCTCGTGTCCATAGGTCATCAAATAGCAAGTACAATGACTTAAA 1843
|||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||
Sbjct 1800 TATGTTCCTTAAACCACCTCGTATCCATAGGTCATCAAATAGCAAGTACAATGACACAAG 1859
Query 1844 AAGAGTAATGTCCGCTGATTCTGCAACTTTTGACAAAGGTGGGATGGAGTACTCAGGAGA 1903
| ||| |||||| |||||| | |||||||||| |||||||||||||||| ||||||||||
Sbjct 1860 ACGAGCAATGTCTGCTGATCCGGCAACTTTTGGCAAAGGTGGGATGGAGAACTCAGGAGA 1919
Query 1904 CGTAGAGGATATTTGCAGCAAAACTGAAAGAGTTCTTTCACCAGAAAAACCTGGTGATGA 1963
||||||||||||| |||||||||||||||||||||||||| |||||||||||| |||||
Sbjct 1920 CGTAGAGGATATTCCCAGCAAAACTGAAAGAGTTCTTTCACGAGAAAAACCTGGCGATGA 1979
Query 1964 ACAGAAAAACACTGAATACCCTAGCAGCAGCAGAGAATTGAACCCTGTGAAGATTGTTAA 2023
||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||| |
Sbjct 1980 ACAGAAAAACACTGAGTACCCTAGCGGCAGCAGAGAATTGAACCCTGTGAAGATTGTTGA 2039
Query 2024 AGGAGTAAACGTTGTCTCGGGGAGGACACGCTCGTTAGTTGAGAAGTTTGAGAGAGGAGA 2083
||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 2040 AGGAGTAAATGTTGTCTCGGGGAGGACACGCTCCTTAGTTGAGAAGTTTGAGAGAGGAGA 2099
Query 2084 AAAAATTATTCATACCGAAGCAGCCAGTACAACAATA-ACTCAGAACACTAATGCAGTGC 2142
||||| || |||||| |||| |||||||||||||||| | ||||||| |||||||||||
Sbjct 2100 AAAAACTACTCATACTGAAGGAGCCAGTACAACAATAGA-ACAGAACAATAATGCAGTGC 2158
Query 2143 TGGAAGATCCGCGTAAGACATCAAGACAGACAGGTGAAACTCCTGTCATATCAACACGAC 2202
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2159 AGGAAGATCCGCGTAAGACATCAAGACAGACAGGTGAAACTCCTGTCATATCAACACGAC 2218
Query 2203 GAGCTAGGAGTACCCCAGCCAGAGTGATGCCTATTGTTCTCAATCGGGATAGTAACATGA 2262
||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 2219 GAGCTAGGAGTACTCCAGCCAGAGTGATGCCTATTGTTCTCAATCGGGATAGTAACGTGA 2278
Query 2263 CATCTGATGAGCCTCCTTTAACACAACCAGCTAGGA---CTTCAGTTCCAGTGATGCCTG 2319
|||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||
Sbjct 2279 CATCTGATGAGCCTCCTTTAACACAACCAGCTAGGACTTCTTCATTTCCAGTGATGCCTG 2338
Query 2320 TGATACTCAGTCAAGCTACTAATGTCACATATGATGAGCC-TC-GT----TTAACACAAG 2373
||||||||| ||||||| |||||||||||||||||||||| || || ||||||||||
Sbjct 2339 TGATACTCAATCAAGCTTCTAATGTCACATATGATGAGCCTTCTGTAGCGTTAACACAAG 2398
Query 2374 AATCTAGAACTTCTCCAT-CCCGTATATTGCCTGTGACATTCAATCAGGCGACAAATATT 2432
|||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 2399 AATCTAGAACTTCT-CATGCCCGTATATTGCCTGTGACATTCAATCAGGCGACAAATATT 2457
Query 2433 ACATCTGAGGAGGCTTCTGTAACATCAAGGCGACC-ACGCAGGAATTCTGCAGCACGAGT 2491
||||||||||||||||||||||||| |||||| || ||||||||||||||||||||||||
Sbjct 2458 ACATCTGAGGAGGCTTCTGTAACATTAAGGCG-CCAACGCAGGAATTCTGCAGCACGAGT 2516
Query 2492 AAGGCCTGTGTCACTCAGTCAGGCAGACATGACATCTCATGAGTGCCCAGTAACATCAGT 2551
||||||||||| ||||||||| | | || |||||||||||||| || |||||||||||
Sbjct 2517 AAGGCCTGTGTTACTCAGTCA-G--G-CA--ACATCTCATGAGTGTCCTGTAACATCAGT 2570
Query 2552 ACGTCCAGCT-AGGACTTCTCCTGCACGTGTAATGCCCACGAAACTAAATCAATCTGTTA 2610
||||||| | ||||||||||| || ||||||||||||||||||||||||||||||||||
Sbjct 2571 ACGTCCA-TTAAGGACTTCTCCAGCCCGTGTAATGCCCACGAAACTAAATCAATCTGTTA 2629
Query 2611 ACATGACATCTGATACATCTCATATAGCATCCAGGCACCGCGTTAGTCCAACACAAATGT 2670
||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||
Sbjct 2630 ACATGACATCTGATACATCTCATATAGCATCCATGCACCGAGTTAGTCCAACACAAATGT 2689
Query 2671 TGACTACACCCACTGTCATTGATCAAGTGGCTGATATGACATTGGATGAGACACATGCAA 2730
|| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 2690 TGGCTACACCCACTGTGATTGATCAAGTGGCTGATATGACATTGGATGAGACACATGCAA 2749
Query 2731 CACAAATTCAACCAGCTTGTGATAACTTGCCCCAGAAGGAAGAGCCGAATATATCTGAGA 2790
||||||||||||||||||| |||||| |||| |||||||||||||||||||||||||| |
Sbjct 2750 CACAAATTCAACCAGCTTGCGATAACATGCCTCAGAAGGAAGAGCCGAATATATCTGATA 2809
Query 2791 GGGAAGATGATAGTGACATCACTGAAAATCTAATGCAAACTCATAACAAGTTCTTAACCA 2850
||||||||||||||||||| ||||||||||| |||| ||| |||||| ||||||||| ||
Sbjct 2810 GGGAAGATGATAGTGACATAACTGAAAATCTTATGCTAACCCATAACGAGTTCTTAAGCA 2869
Query 2851 CTCTTCAATCGAGGTTGACAAAGTTACAAATTGTAAGACATTTTTGGGAGCGTAGCGATG 2910
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2870 CTCTTCAATCGAGGTTGACAAAGTTACAAATTGTAAGACATTTTTGGGAGCGTAGCGATG 2929
Query 2911 TTAAAGGCGCGATCGGGGCATTGAGAAAGCTGACAGATCAGTCTGTTCAAGCAGATGTGA 2970
|||||||||| || |||||||| ||||| |||||||||||||||||||||||||||||||
Sbjct 2930 TTAAAGGCGCAATTGGGGCATTAAGAAAACTGACAGATCAGTCTGTTCAAGCAGATGTGA 2989
Query 2971 TCAGTATTCTAACCGACAAAATAGAGATTCTCACATTGGATATGTTTTCTCAGTTGGTCC 3030
||||||||||||| || |||||||| |||||||||||||||||||||||||| |||||||
Sbjct 2990 TCAGTATTCTAACTGAAAAAATAGAAATTCTCACATTGGATATGTTTTCTCAATTGGTCC 3049
Query 3031 CTGTCCTCACAAGCTTATTGGGTAGCAGGACAGAGAGGCCGGTAAATGTCTCCTTGGATA 3090
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3050 CTGTCCTCACAAGCTTATTGGGTAGCAGGACAGAGAGGCCGGTAAATGTCTCCTTGGATA 3109
Query 3091 TGCTCTTGAAGCTTGTAGCAGTGTTCGGTACAGTTATACGGTCAACTGTCTCAGCTCCAC 3150
|||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||
Sbjct 3110 TGCTCTTGAAGCTTGTAGCAGTGTTCGGTACAGTTATACGCTCAACTGTTTCAGCTCCAC 3169
Query 3151 GGATTGTCGGTGTTGATCTTCATGCAGATGAAAGGCTAGAAATTTGCCAAATTTGTTCAG 3210
|||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||| |
Sbjct 3170 GGATTGTCGGCGTTGATCTTCATGCAAATGAAAGGCTAGAAATTTGCCAAATTTGTTCTG 3229
Query 3211 CGGGATTGCACAAGATTCAAAGGATTCTTCCAGTTCTCGCAAGAAGAGGCGGTCTCATAA 3270
||||| |||||||||||||||| |||||||||||||||||||||||||||||||| ||||
Sbjct 3230 CGGGACTGCACAAGATTCAAAGAATTCTTCCAGTTCTCGCAAGAAGAGGCGGTCTAATAA 3289
Query 3271 CAAGAAAGGCTCAAGAACTAAACCTAGTTCTTCAAGAACCATAGCCACAGGCAAAATCAA 3330
||||||||||||||||||||||||||||||||||||||||||||| || |||||| |||
Sbjct 3290 CAAGAAAGGCTCAAGAACTAAACCTAGTTCTTCAAGAACCATAGCGGCAAGCAAAACCAA 3349
Query 3331 CAATTGATCATATATGCGGTCCGCAAGTTGTTGTGCTGTATATTGCAAAGAAG--TCT-G 3387
||||||||||| | ||||||| ||||||||||| |||| ||||||||||| ||| |
Sbjct 3350 GAATTGATCATACAAGCGGTCCACAAGTTGTTGTAATGTACGTTGCAAAGAAGCGTCTTG 3409
Query 3388 TGTCTCTAGAGTCCAATCTCACTGAGGTTTATATAT-AGATTCATCTAG-CAGAGTCTTT 3445
||||||| ||||||||||||||| |||||||||||| ||| | || |||||||| |
Sbjct 3410 TGTCTCTCGAGTCCAATCTCACTAAGGTTTATATATCAGAGAGAA--AGGCAGAGTCTCT 3467
Query 3446 TGCTGTGGGATCGAACTATATAATCCGGAAACTAATGGGTGTTGTAAATCAtttttttGG 3505
|||||||||||||||||||||| || |||||||||||| |||||||||||||||||||||
Sbjct 3468 TGCTGTGGGATCGAACTATATATTCTGGAAACTAATGGTTGTTGTAAATCATTTTTTTGG 3527
Query 3506 C-TGA-GTAGCTTCAATTCTTGATTTGTTGTTGTTGTTCCGTGGAACTGCGACTCATATT 3563
| | | |||||||||||||||| |||||||||||| |||||||||||| |||||||||
Sbjct 3528 CCT-ACGTAGCTTCAATTCTTGGTTTGTTGTTGTT---CCGTGGAACTGCAACTCATATT 3583
Query 3564 GATTTAATTCCTAACTGATGTGCTAATGCCTTTGTGTAGTC---CTTATTTTGTCTACAA 3620
|||||||||||||||||||||| | | ||||||||||| ||||||||||||||||
Sbjct 3584 GATTTAATTCCTAACTGATGTG-T----C-TTTGTGTAGTCTTTCTTATTTTGTCTACAA 3637
Query 3621 TATCATTTT 3629
|||||||||
Sbjct 3638 TATCATTTT 3646
Score = 54.7 bits (29), Expect = 6e-06
Identities = 31/32 (97%), Gaps = 0/32 (0%)
Strand=Plus/Plus
Query 3685 TTCCACTTTTGGTAATTCGAAAAGATTAGTCT 3716
|||||||||||||||||||||||||||| |||
Sbjct 3781 TTCCACTTTTGGTAATTCGAAAAGATTATTCT 3812
> AT1G61210.1 | Symbols: | Transducin/WD40 repeat-like superfamily
protein | chr1:22564495-22571907 FORWARD LENGTH=4188
Length=4188
Score = 1158 bits (627), Expect = 0.0
Identities = 965/1127 (86%), Gaps = 28/1127 (2%)
Strand=Plus/Plus
Query 226 AAATCGAG-TAGATGATGGCGAAGCGTGGATATAAGCTACAAGAGTTTGTGGCACATTCC 284
|||||||| || | |||||||||||||| ||||||||||| |||||| ||||||||||
Sbjct 276 AAATCGAGTTAAAAAATGGCGAAGCGTGGTTATAAGCTACAGGAGTTTTTGGCACATTCT 335
Query 285 GGAAATGTGAATTGTCTAAGTATCGGAAAGAAGACGTCACGGCTCCTTCTAACTGGTGGA 344
| ||||||||||||||||||||||||||||||||| ||||||||| || ||||||||||
Sbjct 336 GCAAATGTGAATTGTCTAAGTATCGGAAAGAAGACATCACGGCTCTTTATAACTGGTGGT 395
Query 345 GATGATTATAAGGTCAACCTTTGGTCAATCGGCAAAACC-ACTTCGCTAATGAGTCTTTG 403
|||||||| || ||||| |||||| | || ||| || || ||||| |||||||||| ||
Sbjct 396 GATGATTACAAAGTCAATCTTTGGGCGATTGGC-AAGCCTACTTCTTTAATGAGTCTGTG 454
Query 404 TGGGCATACAAGCCCGGTTGATTCAGTAGCTTTTAACTCGGGAGAAATTTTGGTGCTCGG 463
||| ||||| || | || ||||||||||||||| |||| | ||| ||||||| || |
Sbjct 455 TGGACATACTAGTGCAGTGGATTCAGTAGCTTTTGACTCCGCTGAAGTTTTGGTACTTGC 514
Query 464 TGGAGCTTCTTCAGGTGTGATAAAGCTGTGGGATGTAGAAGAAGCAAAGATGGTTAGAGC 523
|||||||||||| ||||||||||||||||||||||| |||||||||||||||||| ||||
Sbjct 515 TGGAGCTTCTTCGGGTGTGATAAAGCTGTGGGATGTTGAAGAAGCAAAGATGGTTCGAGC 574
Query 524 TTTTACTGGACACAGATCCAATTGTTCTGCTGTTGAGTTTCATCCATTTGGTGAATTTCT 583
|||||||||||| ||||||||||||||||||||||| |||||||| |||||||||||| |
Sbjct 575 TTTTACTGGACATAGATCCAATTGTTCTGCTGTTGAATTTCATCCCTTTGGTGAATTT-T 633
Query 584 T-GCATCGGGATCTAGTGACACAAATCTAAGGGTTTGGGATACT-AGAAAGAAGGGATGC 641
| |||||||||||||||||| | ||||||| | ||||||| | | || ||||||||||||
Sbjct 634 TGGCATCGGGATCTAGTGACGCGAATCTAAAGATTTGGGACA-TCAGGAAGAAGGGATGC 692
Query 642 ATCCAAACATACAAGGGTCATACTTGCGGTATTAGCACTATCAGATTTAGTCCTGATGGT 701
|| || || |||||||||||| || | || || ||||||||||| |||| ||| ||||||
Sbjct 693 ATACAGACGTACAAGGGTCATTCTCGTGGCATCAGCACTATCAGGTTTACTCCCGATGGT 752
Query 702 CGTTGGGTAGTGTCCGGAGGACTTGACAATGTTGTAAAGGTATGGGATTTGACTGCTGGA 761
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 753 CGTTGGGTAGTCTCCGGAGGACTTGACAATGTTGTAAAGGTATGGGATTTGACTGCTGGA 812
Query 762 AAGCTTTTGCACGAATTTAAGTTTCATGAAGGACCTATCCGTTCGCTAGAATTCCATCCG 821
||||||||||| |||||||||||||||||||||||||||||||||||||| ||||| |||
Sbjct 813 AAGCTTTTGCATGAATTTAAGTTTCATGAAGGACCTATCCGTTCGCTAGACTTCCACCCG 872
Query 822 CTTGAGTTTCTCCTAGCCACAGGTTCTGCTGACAGAACTGTGAAA-TTCTGGGATTTGGA 880
|||||||| |||||||||||||||||||||||||| ||||| ||| ||||||||||||||
Sbjct 873 CTTGAGTTCCTCCTAGCCACAGGTTCTGCTGACAGGACTGT-AAAGTTCTGGGATTTGGA 931
Query 881 AACGTTTGAACTGATTGGATCTACTAGACCAGAGGCTGCTGGAGTTCGTGCAATCGCTTT 940
|||||||||| ||||||||||||| ||||||||||| ||||||||||| ||||| ||
Sbjct 932 AACGTTTGAATTGATTGGATCTACCCGACCAGAGGCTACTGGAGTTCGTTCAATCAAATT 991
Query 941 TCATCCAGATGGTCAAACCCT-TTTCTGTGGATTGGATGATGGCTTGAAGGTTTATTCAT 999
|||||| ||||| | |||| | ||| ||||| |||||||| |||| |||||||||||||
Sbjct 992 TCATCCGGATGGGCGAACCTTATTT-TGTGGTTTGGATGACAGCTTAAAGGTTTATTCAT 1050
Query 1000 GGGAACCAGTGATTTGCCGGGATGGTGTTGATATGGGATGGTCAACCCTTGGTGACTTCT 1059
||||||| ||| |||||| |||||||||||||||||||||||||| ||||||||||| |
Sbjct 1051 GGGAACCTGTGGTTTGCCATGATGGTGTTGATATGGGATGGTCAACGCTTGGTGACTTAT 1110
Query 1060 GCATCAACGAAGGAAAGTTCATTGGTTGTTCATATTACCGAAATTCTGTTGGGATATGGG 1119
|||||| |||||||||| || | ||||||||||| |||| |||||| || ||||| ||||
Sbjct 1111 GCATCAGCGAAGGAAAGCTCCTGGGTTGTTCATACTACCAAAATTCAGTAGGGATTTGGG 1170
Query 1120 TTTCAGATATATCGGA-ACTTGAGCCATATGG-AGCAGTATCTGAGGATAAGAATGAATG 1177
| ||||||||||| | | |||||||||| || | | ||||| |||||| || || ||
Sbjct 1171 TCTCAGATATATCACAGA-TTGAGCCATACGGCATTGG-ATCTGCGGATAAAAAAGAGTG 1228
Query 1178 CATGCTGAAAAGATTCAGTG-TCTTCAATGATCAGTC-T--GAGAGAGTGG-GAAGTGGC 1232
| || ||||| | |||||| ||| | ||||||||| | || ||| | || || |
Sbjct 1229 CGTGGAGAAAATACTCAGTGCTCTGGA-TGATCAGTCCTTCGATAGAATAAAGA-GTACC 1286
Query 1233 CCAAGGGGCAG-TGTATCCCCAGATAATGAGACAAAAGAGAT-AAAGAACATATACGTTG 1290
|||||| |||| | ||| |||||| ||||||| |||||||| ||| ||||||||| | |
Sbjct 1287 CCAAGGCGCAGCTC-ATCTCCAGATTATGAGACGAAAGAGATCAAA-AACATATACATCG 1344
Query 1291 ACTCCACAGGTGGAAATTCGAATGTAGCGCAAAA-TCCAGGATCTCT 1336
|||| ||||| ||||||||| ||| || || || || |||||||||
Sbjct 1345 ACTCTACAGGCGGAAATTCGGCTGTTGCACATAAGTC-AGGATCTCT 1390
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 185065852727
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5