BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg471269
Length=2881
Score E
Sequences producing significant alignments: (Bits) Value
AT1G11330.2 | Symbols: | S-locus lectin protein kinase family ... 4313 0.0
AT1G11350.1 | Symbols: CBRLK1, SD1-13, RKS2 | S-domain-1 13 | c... 654 0.0
> AT1G11330.2 | Symbols: | S-locus lectin protein kinase family
protein | chr1:3810093-3813558 FORWARD LENGTH=2950
Length=2950
Score = 4313 bits (2335), Expect = 0.0
Identities = 2672/2831 (94%), Gaps = 38/2831 (1%)
Strand=Plus/Plus
Query 2 ACACCAGAAACAAATCTTTGTTGAAACATAAAAC--TTACATCATTTTCTTAGTCAAGTC 59
|||||| ||||||||||| ||||||||||||||| |||||||||||||| |||||||||
Sbjct 132 ACACCAAAAACAAATCTTCGTTGAAACATAAAACTTTTACATCATTTTCTAAGTCAAGTC 191
Query 60 CTCTCATAGAGACAACAAATAGACTACTACTTTACTAATTTACCTCTCTCTTGTAGGAAA 119
|||||||||||| | || | | | || |||||||||| | ||||| |||||| ||
Sbjct 192 TTCTCATAGAGAC-A-GAA-A-A--A-GAC--TACTAATTTA-C-CTCTCGTGTAGG-AA 239
Query 120 AACAAAGCAAAACTGGAATCA-T-TCTGTTTCACAGAGTTATGGTGGTTTCAGTGAACAT 177
||||||||||||||||| ||| | ||||||||| |||||||||||||||||||||| |||
Sbjct 240 AACAAAGCAAAACTGGAGTCATTCTCTGTTTCAAAGAGTTATGGTGGTTTCAGTGACCAT 299
Query 178 ACGTCGTCGGTTTGTTGTTCTTCTTCGTCTACTCGCATTCACTTGCTTGTTGTCTCCTAG 237
|||||||| | || ||||||||| | |||||| |||| |||||| |||||||||| ||
Sbjct 300 ACGTCGTC-G-TT-TTGTTCTTC-T--TCTACTTGCATGCACTTGTTTGTTGTCTCGGAG 353
Query 238 ACTCTGTTCTGGTGAGGACAGAATCACGTTCTCAACTCCGATCAAAGA--C----TCAGA 291
|||||||| |||||||||||||||||| ||||||| ||| |||||||| | |||||
Sbjct 354 ACTCTGTTTTGGTGAGGACAGAATCACTTTCTCAAGTCCTATCAAAGACTCAGAGTCAGA 413
Query 292 GACCCTTCTCTGCAAAAGTGGTATTTTCAGGTTTGGTTTCTTCACTCCTGTTAATTCCAC 351
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 414 GACCCTTCTATGCAAAAGTGGTATTTTCAGGTTTGGTTTCTTCACTCCTGTTAATTCCAC 473
Query 352 TTCTCGGTTACGTTACGTTGGGATTTGGTACGACAAGATTCCACTCCAAACTGTGGTTTG 411
| ||||||||||||| ||||||||||||||||| ||||||||| ||||||||||||||||
Sbjct 474 TACTCGGTTACGTTATGTTGGGATTTGGTACGAAAAGATTCCAATCCAAACTGTGGTTTG 533
Query 412 GGTTGCTAACAAAGACGCTCCTATCAACGACACTTCCGGTGTTATCTCGATCTAT-AACG 470
|||||||||||||||| |||| ||||||||||||||||||||||||||||||||| || |
Sbjct 534 GGTTGCTAACAAAGACTCTCCCATCAACGACACTTCCGGTGTTATCTCGATCTATCAA-G 592
Query 471 ATGGAAATCTCGCGGTTACCGATGGTCGAAAGCGCCTTGTATGGTCGACGAACGTCTCAG 530
||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||
Sbjct 593 ATGGAAATCTCGCGGTTACCGATGGTCGAAATCGCCTTGTATGGTCGACGAATGTCTCAG 652
Query 531 TACCAGTAGCTCCTAATGCTACTTGGGTTCAGCTAATGGATTCCGGGAATCTTATGTTAC 590
||||||||||||| |||||||||||||||||||| |||||||| ||||||||||||||||
Sbjct 653 TACCAGTAGCTCCAAATGCTACTTGGGTTCAGCTTATGGATTCTGGGAATCTTATGTTAC 712
Query 591 AAGATAACAGAAACAATGGTGAGATTCTATGGGAGAGTTTTAAGCATCCTTATGATTCTT 650
|||| ||||||||||||||||||||||| ||||||||||| |||||||||||||||||||
Sbjct 713 AAGACAACAGAAACAATGGTGAGATTCTTTGGGAGAGTTTCAAGCATCCTTATGATTCTT 772
Query 651 TCATGCCAAGAATGACTCTTGGCACCGACGGTAGAACTGGTGGGAATCTAAAGCTTACTT 710
|||||||||||||||||||||||||||||||||||||||| || || |||||||||||||
Sbjct 773 TCATGCCAAGAATGACTCTTGGCACCGACGGTAGAACTGGAGGTAACCTAAAGCTTACTT 832
Query 711 CTTGGACAAGCCATGATGATCCTTCAACAGGGAACTACACTGCTGGTATTGCTCCTTTCA 770
||||||||||||| ||||||||||||||||| |||||||| |||||||||||||||||||
Sbjct 833 CTTGGACAAGCCACGATGATCCTTCAACAGGAAACTACACAGCTGGTATTGCTCCTTTCA 892
Query 771 CGTTTCCTGAGCTTCTTATCTGGAAGAACGATGTTCCAACATGGCGTAGCGGACCGTGGA 830
||||||||||||||||||||||||||||| |||| ||||| |||||||||||||||||||
Sbjct 893 CGTTTCCTGAGCTTCTTATCTGGAAGAACAATGTCCCAACGTGGCGTAGCGGACCGTGGA 952
Query 831 ACGGGCAGGTTTTCATTGGTTTACCGAATATGGATTCACTTCTGTTTCTTGATGGGTTTA 890
|||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 953 ACGGTCAGGTTTTCATCGGTTTACCGAATATGGATTCACTTCTGTTTCTTGATGGGTTTA 1012
Query 891 ATCTTAATAGTGATAATCAAGGGACGATTTCAATGTCTTATGCTAATGATTCGTTCATGT 950
||||||| |||||||||||||| ||||| |||||||||||||||||||||||||||||||
Sbjct 1013 ATCTTAACAGTGATAATCAAGGAACGATCTCAATGTCTTATGCTAATGATTCGTTCATGT 1072
Query 951 ATCACTTTAACTTGGATCCTGAAGGAATTATTTATCAGAAAGATTGGAGTACCTCTATGA 1010
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 1073 ATCACTTTAACTTGGATCCTGAAGGAATTATTTATCAGAAAGATTGGAGTACTTCTATGA 1132
Query 1011 GAACTTGGAGGATTGGTGTAAAGTTTCCATACACAGACTGTGATGCATACGGTAGATGTG 1070
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1133 GAACTTGGAGGATAGGTGTAAAGTTTCCATACACAGACTGTGATGCATACGGTAGATGTG 1192
Query 1071 GTCGATACGGGAGCTGCCGTGCCGGGGAAAATCCGCCTTGTAAATGCGTTAAAGGGTTTG 1130
|||||| ||||||||||| |||||||||||| |||||||||||||| |||||||||||||
Sbjct 1193 GTCGATTCGGGAGCTGCCATGCCGGGGAAAACCCGCCTTGTAAATGTGTTAAAGGGTTTG 1252
Query 1131 TACCAAAGAATAACACCGAGTGGAATGGTGGGAACTGGAGTAATGGATGTGTGAGAAAAG 1190
| |||||||||||||| |||||||||||||| || ||||||||||||||| |||||||||
Sbjct 1253 TTCCAAAGAATAACACAGAGTGGAATGGTGGTAATTGGAGTAATGGATGTATGAGAAAAG 1312
Query 1191 CTCCATTGCAGTGTGAAAGACAGAGAAATGTAAGTAACGGTGGTGGTGGTGGAAAAGCAG 1250
||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||
Sbjct 1313 CTCCATTGCAGTGTGAAAGACAGAGAAATGTAAGTAATGGTGGTGGTGGAGGAAAAGCAG 1372
Query 1251 ATGGGTTTTTGAAACTGCAGAAGATGAAAGTGCCAATCTATGCGGAACGGTCTGAAGCTA 1310
|||| |||||||||||||||||||||||||| ||||||| ||||||||||||||||||||
Sbjct 1373 ATGGTTTTTTGAAACTGCAGAAGATGAAAGTACCAATCTCTGCGGAACGGTCTGAAGCTA 1432
Query 1311 ATGAACAAGTTTGTCCTAAAGTCTGTTTAGATAACTGTTCTTGCACGGCTTATGCTTATG 1370
||||||||||||||||||||| || |||||||||||||||||||| |||||||| ||||
Sbjct 1433 GTGAACAAGTTTGTCCTAAAGTATGCTTAGATAACTGTTCTTGCACAGCTTATGCATATG 1492
Query 1371 ACAGAGGAATCGGTTGCATGCTTTGGAGTGGTGATTTAGTTGATATGCAATCATTTTTGG 1430
| |||||||| || ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1493 ATAGAGGAATTGGATGCATGCTTTGGAGTGGTGATTTAGTTGATATGCAATCATTTTTGG 1552
Query 1431 GAAGTGGCATTGATCTCTTTATTCGAGTTGCGCATTCAGAACTCAAAACACAAAGCAATC 1490
|||||||||||||||| |||||||| ||||| |||||||||||||||||||| |||||||
Sbjct 1553 GAAGTGGCATTGATCTTTTTATTCGTGTTGCTCATTCAGAACTCAAAACACATAGCAATC 1612
Query 1491 TAGCAATTATGATCGCAGCACCTGTGATAGGCGTTGTGTTAATTGCTGCGGTCTGTGTTC 1550
||||| ||||||||||||||||||||||||||||| ||||||||||||||||||| ||||
Sbjct 1613 TAGCAGTTATGATCGCAGCACCTGTGATAGGCGTTATGTTAATTGCTGCGGTCTGCGTTC 1672
Query 1551 TTTTAGCATGCCGGAAATTCAGAAAGCGTCCAGCTCCAGCGAAAGATAGAAGTGCAGAGC 1610
|||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||
Sbjct 1673 TTTTAGCATGCCGGAAATACAAAAAGCGTCCAGCTCCAGCGAAAGATAGAAGTGCAGAGC 1732
Query 1611 TAATGTTTAAGAGAATGGAAGCACTTACAAGTGATAATGAGTCTGCTTCTAACCAAATAA 1670
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 1733 TAATGTTTAAGAGAATGGAAGCACTTACAAGTGATAATGAGTCTGCTTCTAACCAAATCA 1792
Query 1671 AGCTCAAGGAGCTTCCACTCTTTGAGTTTCAAGTGTTAGCTACAGCAACCGATAGCTTCT 1730
|||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||
Sbjct 1793 AGCTCAAGGAGCTTCCACTCTTTGAGTTTCAAGTGTTAGCTACATCAACTGATAGCTTCT 1852
Query 1731 CTCTAAGAAACAAGCTCGGGCAAGGCGGATTTGGTCCTGTTTACAAGGGAAAATTACCAG 1790
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
Sbjct 1853 CTCTAAGAAACAAGCTCGGGCAAGGCGGGTTTGGTCCTGTTTACAAGGGAAAATTACCTG 1912
Query 1791 AAGGACAAGAAATTGCAGTCAAGAGGCTCTCAAGGAAATCAGGACAAGGACTAGAGGAAC 1850
||||||||||||||||||| |||||||||||| |||||||||| ||||||||||||||||
Sbjct 1913 AAGGACAAGAAATTGCAGTGAAGAGGCTCTCACGGAAATCAGGTCAAGGACTAGAGGAAC 1972
Query 1851 TTATGAACGAAGTGGTTGTGATATCGAAGTTGCAACATCGGAATCTAGTGAAGTTACTTG 1910
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 1973 TTATGAACGAAGTGGTTGTGATATCTAAGTTGCAACATCGGAATCTAGTGAAGTTACTTG 2032
Query 1911 GATGTTGCATTGAAGGTGAAGAAAGAATGTTAGTCTACGAATATATGCCAAAGAAAAGCT 1970
||||||| |||||||||||||||||||||||||| || ||||||||||||||||||||||
Sbjct 2033 GATGTTGTATTGAAGGTGAAGAAAGAATGTTAGTATATGAATATATGCCAAAGAAAAGCT 2092
Query 1971 TGGATGCATATCTATTTGACCCAATGAAGCAAAATATTCTTGATTGGAAGACTAGGTTCA 2030
||||||||||||| |||||||||||||||||||| |||||||||||||||||| ||||||
Sbjct 2093 TGGATGCATATCTTTTTGACCCAATGAAGCAAAAGATTCTTGATTGGAAGACTCGGTTCA 2152
Query 2031 ACATAATGGAAGGAATTTGCAGAGGTCTTTTGTACCTTCACAGAGATTCAAGACTAAAGA 2090
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2153 ACATAATGGAAGGAATTTGCAGAGGTCTTTTGTACCTTCACAGAGATTCAAGACTAAAGA 2212
Query 2091 TCATACACAGAGATTTAAAAGCCAGCAACATTTTGTTAGATGAGAATCTAAACCCGAAGA 2150
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 2213 TCATACACAGAGATTTAAAAGCCAGCAACATTTTGTTAGATGAGAATCTAAACCCCAAGA 2272
Query 2151 TATCTGATTTCGGACTTGCAAGAATTTTCCGGGCGAATGAAGATGAAGCTAACACAAGAA 2210
|||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 2273 TATCTGATTTTGGACTTGCAAGAATTTTCCGAGCGAATGAAGATGAAGCTAACACAAGAA 2332
Query 2211 GGGTTGTTGGAACATACGGCTATATGTCACCGGAATATGCAATGGAAGGTTTCTTTTCAG 2270
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 2333 GGGTTGTTGGAACATACGGCTATATGTCACCGGAGTATGCAATGGAAGGTTTCTTTTCAG 2392
Query 2271 AAAAATCAGATGTTTTCAGCTTGGGGGTTATATTTCTAGAGATCATAAGTGGAAGAAGAA 2330
||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||
Sbjct 2393 AAAAATCAGATGTTTTCAGCTTGGGGGTTATATTTCTCGAGATCATAAGTGGGAGAAGAA 2452
Query 2331 ACTCTAGTTCTCACAAGGAAGAGAATAATCTGAACCTTTTGGCTCATGCGTGGAAGCTGT 2390
||||||||||||||||||||||||||||||| |||||||||||| |||| ||||||||||
Sbjct 2453 ACTCTAGTTCTCACAAGGAAGAGAATAATCTCAACCTTTTGGCTTATGCTTGGAAGCTGT 2512
Query 2391 GGAACGACGGTGAGGCTGCTTCTCTAGCAGATCCAGCCGTCTTTGATAAGTGTTTCGAGA 2450
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2513 GGAACGACGGTGAGGCTGCTTCTCTAGCAGATCCAGCCGTCTTTGATAAGTGTTTCGAGA 2572
Query 2451 AAGAGATAGAGAAATGTGTTCATATTGGACTGTTATGTGTGCAAGAAGTTGCAAACGATA 2510
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2573 AAGAGATAGAGAAATGTGTTCATATTGGACTGTTATGTGTGCAAGAAGTTGCAAACGATA 2632
Query 2511 GACCAAATGTTTCAAACGTGATATGGATGCTAACTACCGAGAACATGAACCTTGCCGATA 2570
|||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||
Sbjct 2633 GACCAAATGTTTCAAACGTGATATGGATGCTAACTACCGAGAACATGAGCCTCGCCGATC 2692
Query 2571 CTAAGCAGCCAGCGTTTATAGTAAGAAGAGGAGCTTCTGAGGCTGAATCTTCAGACCAGA 2630
| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 2693 CGAAGCAGCCAGCGTTTATAGTAAGAAGAGGAGCTTCTGAGGCTGAATCTTCTGACCAGA 2752
Query 2631 GTAGTCAAAAGGTATCTATCAATGATGTGAGTCTCACAGCTGTAACAGGACGTTAAGCTC 2690
||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||
Sbjct 2753 GTAGTCAAAAGGTATCTATCAATGATGTGAGCCTCACAGCTGTAACAGGACGTTAACCTC 2812
Query 2691 ACCACCAAGCCAATCTCTGTCTGTTTATATACATA-TAATATGTAATATATACGTTTTGA 2749
||||||| ||||||||| ||||||||||||||||| || ||||||||||| |||||||||
Sbjct 2813 ACCACCACGCCAATCTCAGTCTGTTTATATACATAATAGTATGTAATATACACGTTTTGA 2872
Query 2750 GAAACTCATGTCATATGTTTACAAATTTTGTCATTCTGCGTTTGTTCAATGGTTAGTTTA 2809
||||||| | |||||||||||||||||| || |||||| ||| |||||||||| |||
Sbjct 2873 GAAACTC----C-TATGTTTACAAATTTTGTTAT-CTGCGTCTGTGCAATGGTTAGATTA 2926
Query 2810 ATGAA-TAAGA 2819
|||| |||||
Sbjct 2927 CTGAAATAAGA 2937
> AT1G11350.1 | Symbols: CBRLK1, SD1-13, RKS2 | S-domain-1 13 |
chr1:3817591-3820805 REVERSE LENGTH=2680
Length=2680
Score = 654 bits (354), Expect = 0.0
Identities = 1599/2174 (74%), Gaps = 190/2174 (9%)
Strand=Plus/Plus
Query 610 TGAGATTCTATGGGAGAGTTTTAAGCATCCTTATGA-TTCT-TTCATGCCAAGAATGACT 667
||||||||| |||||||| ||| |||||||| | | | | || |||||| ||||| |
Sbjct 473 TGAGATTCTTTGGGAGAGCTTTGAGCATCCTCAAAACATATATT--TGCCAACAATGAGT 530
Query 668 CTTGGC-ACCGAC-GGTAGAACTGGTGGGAATCTAAAGCTTACTTCTTGGACAAG-CCAT 724
||| || || ||| | | ||| || ||| || ||||| | ||||||| ||| || |
Sbjct 531 CTT-GCTACTGACACG-AAAACAGGCAGGAGCCTTAAGCTAAGATCTTGGAAAAGCCCGT 588
Query 725 GATGATCCTTCAACAGGGAAC--TACACTGCTGGTATTG-CTCCT-TTCACGTTTCCTGA 780
|||||| || | || || ||| |||| ||| ||| |||| | | | ||||| ||
Sbjct 589 -TTGATCCATC-GCCTGG-ACGATACTCTGCAGGT-TTGATTCCTCTGC-CATTTCCAGA 643
Query 781 GCTTCTTATCTGG-AAGAACGATGTTCCAACATGGCGTAGCGGACCGTGGAACGGGCAGG 839
||| || ||||| ||| | ||| ||| | ||||||||||| || ||||| || ||
Sbjct 644 ACTTGTTGTCTGGAAAG-ATGATCTTCTGATGTGGCGTAGCGGTCCATGGAATGGTCA-A 701
Query 840 T-TTTCATTGGTTTACCGAATATGGATTCA-CTTCTGTTTCTTGAT-GGGTTTAA-TCTT 895
| |||||||| ||||| |||||||||| | | | | |||| | | | |||| |||
Sbjct 702 TACTTCATTGGGTTACCAAATATGGATT-ACCGTATCAATCTT-TTCGAG-TTAACCCTT 758
Query 896 AATAGTGATAATCAAGGGA-C-GATTTCAATGTCTTATGCT--AATGATTCGTTCATGTA 951
| |||||| |||| | ||| | | | || ||||| |||||| || || | || ||||
Sbjct 759 AGTAGTGACAATCGA-GGATCTG-TCTCCATGTCCTATGCTGGAA--ATACTTTGTTGTA 814
Query 952 TCACTTTAACTTGGA-TCCTGAAGGAATTAT-TTATCAGAAAGATTGG-A-GTACCTCTA 1007
||| ||| |||||| ||| ||||||| | || ||||| ||||||| | || || |
Sbjct 815 TCATTTTCTCTTGGACTCC-GAAGGAAGCGTGTT-TCAGAGAGATTGGAACGTGGCTATC 872
Query 1008 TGAGAACTTGGAGGA-TTGGTGTAAAGTTTCCATAC-A-CAGACTGTGATGCATACGGTA 1064
|||| |||| || |||| ||||| | |||| | | || | |||||| |||||| |
Sbjct 873 CAAGAA--TGGAAGACCTGGT-TAAAGGTCCCAT-CGACCA-AGTGTGATACATACGCCA 927
Query 1065 GATGTGGTCGATACG---G--G-AGCTGCCGTGCCGGGGAAAATCCGCCTTGTAAATGCG 1118
|||||| | || || | | || | | | ||||| | ||||||||| | |||
Sbjct 928 CATGTGGCCAATTCGCTAGTTGCAGATTCAATCCCGGGTCGACTCCGCCTTGCATGTGCA 987
Query 1119 TTAAAGGGTTTGTA-CCAAAGAATAACACCGAGTGGAATGGTGGGAACTGGAGTAATGGA 1177
||| ||||||| | ||| ||| | || | |||||||| || ||||||| | | |||
Sbjct 988 TTAGAGGGTTT-AAGCCACAGAGTTACGCGGAGTGGAACAACGGAAACTGGACTCAGGGA 1046
Query 1178 TGTGTGAGAAAAGCTCCATTGCAGTGTGAAAGACAGAGAAATGTAAGTAACGGTGGTGGT 1237
|| || ||||| || ||||||||||| ||||| | ||| | || |||| ||| ||
Sbjct 1047 TGCGTAAGAAAGGCACCATTGCAGTGCGAAAGTC-GAG--A--CAA-CAACGATGGAAGT 1100
Query 1238 GGTGGAAAAGCAGATGGGTTTTTGAAACTGCAGAAGATGAAAGTG-CCAATCTATGCGGA 1296
| ||||| ||||| ||| ||| | |||| |||||||||||| || | | || | |
Sbjct 1101 --AGAAAAAG-TGATGGATTTGTGAGAGTGCAAAAGATGAAAGTGCCCCA-CAATCCACA 1156
Query 1297 ACGGTCTGAAGCTAATGAACAAGTTTGTCCT-AAAGTCTGT-TTAGATAACTGTTCTTGC 1354
||| |||| ||| |||||||||| |||||| | || |||| | | | |||||||||||
Sbjct 1157 ACGATCTGGAGCCAATGAACAAGACTGTCCTGAGAG-CTGTCTGA-AGAACTGTTCTTGT 1214
Query 1355 ACGGCTTATGCTTA-T-GACAGAGGAATCGGTTG-CATGCTTTGGAGTGGTGA-TTTAGT 1410
|||||||| || | | |||||||| || ||||| | | |||||||| || | || | |
Sbjct 1215 ACGGCTTA--CTCATTCGACAGAGGGATTGGTTGTC-TTCTTTGGAGCGGAAACTTGA-T 1270
Query 1411 TGATATGCAATCA-TTTT-TGGGAAGTGGCATTGATCTCTTT--ATTCGAGTTGC-GCAT 1465
||||||| | | |||| | || | |||| || | | ||| ||||| |||| | ||
Sbjct 1271 GGATATGC-AGGAGTTTTCT-GGCACTGGC-GTGGT-TTTTTACATTCGTCTTGCAG-AT 1325
Query 1466 TCAGAACTCAAAACA-CAAAGCAATCTAG-CAATTATGATCGCAGCACCTGTG--A-TAG 1520
||||| | |||| | | | ||||| | ||||| ||||| ||| | || || | |||
Sbjct 1326 TCAGAGTTTAAAA-AGCGGACCAATC-GGTCAATTGTGATCACAGTAACTTTGCTAGTAG 1383
Query 1521 GCG-TTGTGTTAATTGCTGCGGTCTGTGTTCTTTTAGCA-TGCCGGAA-ATTCAG-AAAG 1576
||| || | || |||| | || | |||| | |||||| || |||| | || | |||
Sbjct 1384 GCGCTT-TTTTGTTTGCAG-GGAC--TGTTGTCTTAGCACTG-TGGAAGA-TC-GCTAAG 1436
Query 1577 CGTCCAGCTCCAGCGAAAG-ATAGAAGTGC-AGAGCTAATGT-TTAAGAGAATGGAAGCA 1633
| | || || | ||| | |||| | || |||| | | | ||||||||||||
Sbjct 1437 CAT--AG----AGAG-AAGAACAGAAACACAAG-GCTACT-TAATGAGAGAATGGAAG-- 1485
Query 1634 CTTACAAGTGA-TAATGA-----GT-C--TGCTTCT-AACCAAATA-AAGCTCAAGGAGC 1682
||| |||| | |||||| || | | ||| | || | |||| ||||| || ||||
Sbjct 1486 CTT-TAAGT-AGTAATGACGTTGGTGCAATCCTTGTGAATC-AATACAAGCTTAAAGAGC 1542
Query 1683 TTCCACTCTTTGAGTTTCAAGTGTTAGCTA-CAGCAACCGATAGCTTCTCTCTAAGAAAC 1741
| ||||| || ||||| ||||||||||| | || ||| | | || ||| | | ||||
Sbjct 1543 TACCACTGTTCGAGTTCCAAGTGTTAGC-AGTGGCGACCAACAATTTTTCTATCACAAAC 1601
Query 1742 AAGCTCGGGCAAGGCGGATTTGGTCCTGTTTACAAGGGAAAATTACCAGAAGGACAAGAA 1801
|||||||| ||||| ||||||||| ||||||||||||| | |||| |||||| | ||
Sbjct 1602 AAGCTCGGACAAGGAGGATTTGGTGCTGTTTACAAGGGGAGGTTACAAGAAGGGCTCGAT 1661
Query 1802 ATTGCAGTCAAGAGGCTCTCAAG-GAA-ATCAGGACAAGGACTAGAGGAACTTATGAACG 1859
|| || || |||||||| || | ||| ||| ||||||||| | ||||| || |||| |
Sbjct 1662 ATCGCTGTGAAGAGGCTTTC--GCGAACATCGGGACAAGGAGTCGAGGAGTTTGTGAATG 1719
Query 1860 AAGTGGTTGTGATATCGAAGTTGCAACATCGGAATCTAGTGAAG-TTACTTGGATGT-TG 1917
||||||| ||||| || ||| ||||||| |||||||| ||| || || ||||| | | ||
Sbjct 1720 AAGTGGTCGTGATCTCAAAGCTGCAACACCGGAATCTCGTG-AGATTGCTTGG-TTTCTG 1777
Query 1918 CATTGAAGGTGAAGAAAGAATGTTAGTCTACGAATAT-ATGCCAAAGAAAAGCTTGGATG 1976
||||||||| ||||| || ||||| ||||| || | | |||||| |||| | || || |
Sbjct 1778 CATTGAAGGAGAAGAGAGGATGTTGGTCTATGAGT-TCATGCCAGAGAATTGTTTAGACG 1836
Query 1977 CATATCTATTTGACCCAATGAAGCAAAATA-TTCTTGATTGGAAGACTAGGTTCAACATA 2035
|||||||||||||||| |||||| ||| | ||||||| |||||||| |||| ||||||
Sbjct 1837 CATATCTATTTGACCCGGTGAAGC-AAAGACTTCTTGACTGGAAGACGCGGTTTAACATA 1895
Query 2036 ATGGAAGGAATTTGCAGAGGTCTTTTGTACCTTCACAGAGATTCAAGACTAAAGATCATA 2095
|| || || ||||||||||||||| |||||||||||||||||||||| || |||||||||
Sbjct 1896 ATCGATGGGATTTGCAGAGGTCTTATGTACCTTCACAGAGATTCAAGGCTGAAGATCATA 1955
Query 2096 CACAGAGATTTAAAAGCCAGCAACATTTTGTTAGATGAGAATCTAAACCCGAAGATATCT 2155
||||||||| ||||||| ||||| |||||||||||||||||||||||||||||||||||
Sbjct 1956 CACAGAGATCTAAAAGCAAGCAATATTTTGTTAGATGAGAATCTAAACCCGAAGATATCC 2015
Query 2156 GA-TTTCGGACTTGCAAGAATTTTCC-GGGCGAATGAAGATGAAGCTAA-CACAAG-AAG 2211
|| ||| || || || || ||||||| ||| |||||| ||||||| ||| ||| | |||
Sbjct 2016 GACTTTGGG-CTGGCTAGGATTTTCCAGGG-GAATGAGGATGAAG-TAAGCACC-GTAAG 2071
Query 2212 GGTTGTTGGAACATACGGCTATATGTCACCGGAATATGCAATGGAAGGTTTCTTTTCAGA 2271
|| |||||||||||||| |||||| |||| ||||||||||||| ||| || || |||||
Sbjct 2072 AGTGGTTGGAACATACGGTTATATGGCACCCGAATATGCAATGGGAGGGTTGTTCTCAGA 2131
Query 2272 AAAATCAGATGTTTTCAGCTTGGGGGTTATATTTCT-AGAGATCATAAGTGGAAGAAGAA 2330
||||| || ||||||||||| || || ||| | || |||||| | |||||||||||||
Sbjct 2132 GAAATCTGACGTTTTCAGCTTAGGAGTCATACT-CTTAGAGATTGTGAGTGGAAGAAGAA 2190
Query 2331 ACTCTAG-TTCTCACAAGGAAGAGAATAATCTGAACCTTTTGGCTCATGCGTGGAAGCTG 2389
|||| || || | |||| || | | | |||| || |||| ||| |||| ||||| ||
Sbjct 2191 ACTCAAGCTTTT-ACAATGATGGGCAGAATCCAAATCTTTCAGCTTATGCATGGAAACTC 2249
Query 2390 TGGAACGAC-GGTGAGGCTGCTT-CTCTAGCAGATCCAGCCGTCTTTGATA-AGTGTTTC 2446
|||||| || || || | | || |||| | ||||| | | ||||||| | |||||||
Sbjct 2250 TGGAAC-ACCGGGGAAGATA-TTGCTCTTGTGGATCCGGTCATCTTTGA-AGAGTGTTTT 2306
Query 2447 GAGAAA-GAGATA-G-AGAAATGTGTTCATATTGGACTGTTATGTGTGCAAGAAGTTGCA 2503
|| ||| || ||| | ||| ||||| || | ||||| || ||||| ||||| |||
Sbjct 2307 GA-AAATGAAATACGCAGA--TGTGTGCACGTAGGACTATTGTGTGTACAAGATCACGCA 2363
Query 2504 AACGATAGACCAAATGTTTCAAACG-TGATATGGATGCTAACTACCGAGAACATGAA-CC 2561
|| ||||| || | ||| ||| || |||| |||||||||| || ||||||| | || ||
Sbjct 2364 AATGATAGGCCGAGCGTTGCAA-CGGTGATTTGGATGCTAAGTAGCGAGAAC-TCAAACC 2421
Query 2562 TTGCC-GATACTAAGCAGCCAGCGTTTATAG-TAAGAAGAGG-AGCTTCTGAGGCTGAAT 2618
|| || || | ||||| || || |||||| || |||| || | |||| || | |||||
Sbjct 2422 TT-CCAGAGCCAAAGCAACCTGCATTTATACCTA-GAAGGGGCA-CTTCAGAAGTTGAAT 2478
Query 2619 CTTCAG-ACCA-GAGTAGTCAAAAGGTATCTATCAATGATGTGAGTCTCACAGCTGTAAC 2676
| || | || | | | | ||| || ||| ||||| ||||||| |||||| ||||
Sbjct 2479 CCTCGGGACAAAGCG-ACCCAAGAGC-ATCGATCAACAATGTGAGCCTCACAAAAATAAC 2536
Query 2677 AGGACGTTAAGCTC 2690
||||||||| ||||
Sbjct 2537 AGGACGTTA-GCTC 2549
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 143176455322
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5