BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg471270
Length=2668
Score E
Sequences producing significant alignments: (Bits) Value
AT1G11340.1 | Symbols: | S-locus lectin protein kinase family ... 3452 0.0
AT1G11410.1 | Symbols: | S-locus lectin protein kinase family ... 1733 0.0
> AT1G11340.1 | Symbols: | S-locus lectin protein kinase family
protein | chr1:3814116-3817420 REVERSE LENGTH=2706
Length=2706
Score = 3452 bits (1869), Expect = 0.0
Identities = 2114/2234 (95%), Gaps = 9/2234 (0%)
Strand=Plus/Plus
Query 1 ATGATTATTGTTGGTGTTCATTTAGTTAGTTTCACACTTTTAAGTCACAAGAATCAGTTC 60
||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||
Sbjct 1 ATGATTATTGTTGGTGTTCTTTTAGTTAGTTTCACACTTTTAAGTCACATGAATCAGTTC 60
Query 61 TTACATCTTTTTGAAAGTCCAACCTTTGAGAAATATCCGGAACTGGGGCGTGACTCACAG 120
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 61 TTACATCTTTTTGAAAGTCCAACCTTTGAGATATATCCGGAACTGGGGCGTGACTCACAG 120
Query 121 TTAATGGCTGATCCACTTGGTTTTCAATACTTACACAGCATTTATACATTTTCACTAACT 180
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 121 TTAATGACTGATCCACTTGGTTTTCAATACTTACACAGCATTTATACATTTTCACTAAAT 180
Query 181 CCTTGCTCAGAAAACAAACACAAACATGAAGATTATCGTCATTATCTTCTTTTTCTCCCT 240
|||||||| | ||||||||||||| |||||| || || || ||||||||||||||| |||
Sbjct 181 CCTTGCTCTG-AAACAAACACAAATATGAAGGTTGTCTTCGTTATCTTCTTTTTCTTCCT 239
Query 241 CTTTCAATCTTGTATCTCTGTTGATACGATCATGAGAAGACAGTCCTTGAGAGATGGTGA 300
||| |||| |||||||||||| ||||| || |||||||||||||||||||||||||||||
Sbjct 240 CTTCCAATTTTGTATCTCTGTGGATACAATTATGAGAAGACAGTCCTTGAGAGATGGTGA 299
Query 301 TGTCATACACTCTGTAGGGAAGAGATTCGCATTTGGATTCTTCAGTCTTGGGGATTCGA- 359
|| |||| ||| | ||||||||||||||| |||||||||||||||||||||||||| |
Sbjct 300 GGTTATACTCTCCGCAGGGAAGAGATTCGCGTTTGGATTCTTCAGTCTTGGGGATTC-AG 358
Query 360 AGCTCCGGTATGTGGGGATTTGGTATGCTCAAATCACTCAACAGACTATTGTATGGGTTG 419
||||||||||||| ||||||||||||||||||||| |||||||||||||||| |||||||
Sbjct 359 AGCTCCGGTATGTTGGGATTTGGTATGCTCAAATCTCTCAACAGACTATTGTTTGGGTTG 418
Query 420 CAAACAGAGACCATCCTATTAATGACACCTCTGGTCTGATAAAGTTCAGTAACAGATGCA 479
|||||||||||||||||||||||||||||||||| || |||||||||| |||||| |||
Sbjct 419 CAAACAGAGACCATCCTATTAATGACACCTCTGGGATGGTAAAGTTCAGCAACAGAGGCA 478
Query 480 ATCTCTGTGTGTATGCATCTGTCAATGGAACAGAGCCTATCTGGTCTACTGATGTTTCAG 539
|||||| ||| |||||||||| ||||| |||||||| ||||||||| || |||||||||
Sbjct 479 ATCTCTCTGTCTATGCATCTGACAATGAAACAGAGCTTATCTGGTCAACAAATGTTTCAG 538
Query 540 ATAGTATCTTGGAAACAACTTTAGTTGCTAGACTCTCTGATTTAGGCAACCTTGTTCTGC 599
||||||| |||||| ||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 539 ATAGTATGTTGGAACCAACTTTAGTTGCTACACTCTCTGATTTAGGCAACCTTGTTCTGT 598
Query 600 TTGATCCAGTCACAGGGAGAAGTTTCTGGGAGAGCTTTGATCATCCTACAGACACTTTTC 659
||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||
Sbjct 599 TTGATCCAGTCACAGGGAGAAGTTTCTGGGAGAGCTTTGATCACCCTACAGACACGTTTC 658
Query 660 TTCCGTTTATGAGGA-TGGGTTTCACACGAAAAGACGGTTTGGATCGCTTTCTGACATCA 718
|||||||||||| || |||| |||||||||||||||||||||||||||| ||| ||||||
Sbjct 659 TTCCGTTTATGA-GATTGGGATTCACACGAAAAGACGGTTTGGATCGCTCTCTAACATCA 717
Query 719 TGGAAATCTCATGGGGACCCTGGTTGTGGAGACTTAACATTGCGGATGGAACGTAGAGGG 778
||||| |||||||| |||||||||| ||||||||||| | ||||||||||||||||||||
Sbjct 718 TGGAAGTCTCATGGTGACCCTGGTTCTGGAGACTTAATACTGCGGATGGAACGTAGAGGG 777
Query 779 TTTCCGCAGTTGATTCTGTACAAAGGTCG-AGTCCCGTGGTGGCGTATGGGGTCGTGGAC 837
||||| ||||||||||||||||||||| | | ||| ||||||||||||||||| |||||
Sbjct 778 TTTCCACAGTTGATTCTGTACAAAGGT-GTAACCCCATGGTGGCGTATGGGGTCATGGAC 836
Query 838 CGGGCATAGGTGGAGCGGTGTGCCTGAAATGCCAATAGGGTATATCTTCAATAACTCGTT 897
|||||||||||||||||| ||||||||||||||||||||||| |||||||||||||| ||
Sbjct 837 CGGGCATAGGTGGAGCGGGGTGCCTGAAATGCCAATAGGGTACATCTTCAATAACTCATT 896
Query 898 TGTGAATAATGAGGACGAAGTATCCTTCACTTACGGTGTGACAGATGCTTCAGTCATAAC 957
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 897 TGTGAATAATGAGGACGAAGTATCCTTCACTTACGGTGTGACAGATGCTTCGGTCATAAC 956
Query 958 AAGAACCATGGTGAACGAGACTGGAACCATGCACCGGTTCACATGGATTGCGAGGGACAA 1017
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 957 AAGAACCATGGTGAACGAGACTGGAACCATGCACCGGTTTACATGGATTGCGAGGGACAA 1016
Query 1018 GAGATGGAATGATTTCTGGTCAGTTCCTAAAGAGCAGTGCGATAACTACGCTCATTGTGG 1077
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1017 GAGATGGAATGATTTCTGGTCAGTTCCTAAAGAGCAGTGCGATAACTACGCTCATTGTGG 1076
Query 1078 CCCTAACGGTTACTGTGATCCCCCTAGCTCAAAAACGTTTGAGTGCACATGCCTACCTGG 1137
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 1077 CCCTAACGGTTACTGTGATTCCCCTAGCTCAAAAACGTTTGAGTGCACATGCCTACCTGG 1136
Query 1138 TTTTGAGCCCAAGTTTCCCCGGCATTGGTTCTTGAGGGACTCTTCTGGCGGGTGTACCAA 1197
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 1137 TTTTGAGCCCAAGTTTCCCCGGCATTGGTTCTTGAGGGACTCTTCTGGCGGGTGTACAAA 1196
Query 1198 GAAAAA-AGGAGCTTCAAGATGCAGTGAGAAAGACGGGTTTGTGAAGTTAAAGCGCATGA 1256
|||||| || |||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 1197 GAAAAAGAG-AGCTTCAATATGCAGTGAGAAAGACGGGTTTGTGAAGTTAAAGCGCATGA 1255
Query 1257 AGATTCCTGACACGTCAGATGCAAGTGTGGATATGAACATAACATTTAAGGAGTGCAAAC 1316
||||||| ||||| |||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 1256 AGATTCCCGACACATCAGATGCAAGTGTGGATATGAACATAACATTGAAGGAGTGCAAAC 1315
Query 1317 AGAGGTGCTTGAGGAACTGCTCTTGTGTTGCTTATGCAAGTGCTTACCACGAGAGTAAAA 1376
|||||||||||| ||||||||||||||| ||||| |||||||||||||||||||||||||
Sbjct 1316 AGAGGTGCTTGAAGAACTGCTCTTGTGTCGCTTACGCAAGTGCTTACCACGAGAGTAAAA 1375
Query 1377 GAGGAGCAATAGGATGCTTGACATGGCACAGTGGTATGTTGGATGCGAGGACATACTTGA 1436
||||||||||||||||||||| |||||| |||||||||||||||| |||||||||||||
Sbjct 1376 GAGGAGCAATAGGATGCTTGAAATGGCATGGTGGTATGTTGGATGCAAGGACATACTTGA 1435
Query 1437 GCTCCGGACAAGATTTCTACATACGTGTAGACAAGGAAGAGTTAGCACTGTGGAACAGAA 1496
||| ||||||||||||||||||||||||||||||||||||||||| | |||||||||||
Sbjct 1436 ACTCGGGACAAGATTTCTACATACGTGTAGACAAGGAAGAGTTAGCGCGGTGGAACAGAA 1495
Query 1497 AGGGCTTATCAGGGAAGAGGAGAGTCCTTCTGATTCTTATCAGTTTGGTTGCAGCCGTAA 1556
| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 1496 ATGGCTTATCAGGGAAGAGGAGAGTCCTTCTGATTCTTATCAGTTTGATTGCAGCCGTAA 1555
Query 1557 TGTTACTAACTGTCATTTTGTTCTGTGTCGTAAGGGAGCGACGAAAGTCAAACAGGCATA 1616
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 1556 TGTTACTAACTGTCATTTTGTTCTGTGTTGTAAGGGAGCGACGAAAGTCAAACAGGCATA 1615
Query 1617 GAAGCTCTTCGGCAAACTTCGCCCCAGTCCCTTTCGATTTTGAAGAATCATTCAGATTTG 1676
||||||||||||||||||||||||| |||||||| |||||||| |||||||| |||||||
Sbjct 1616 GAAGCTCTTCGGCAAACTTCGCCCCGGTCCCTTTTGATTTTGACGAATCATTTAGATTTG 1675
Query 1677 AGCAAGACAAGGCGAGAAACCGGGAGTTACCTTTCTTTGATCTTAACACGATCGCTGCAG 1736
| |||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||
Sbjct 1676 AACAAGACAAGGCGAGAAACCGGGAGTTACCTTTATTTGATCTTAACACGATCGTTGCAG 1735
Query 1737 CAGCGAATAACTTCTCTTCCCAAAACAAGCTTGGAGCAGGTGGTTTCGGACCCGTTTATA 1796
|| | ||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 1736 CAACAAATAACTTCTCTTCCCAAAACAAGCTTGGAGCAGGTGGTTTCGGACCTGTTTATA 1795
Query 1797 AGGGCGTGTTACAAAACGGTATGGAGATAGCGGTGAAGAGGTTGTCGAAAAACTCGGGGC 1856
||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||| |
Sbjct 1796 AGGGCGTGTTACAAAACCGTATGGAGATAGCGGTGAAGAGGTTGTCGAGAAACTCGGGAC 1855
Query 1857 AAGGAATGGAAGAGTTCAAGAACGAGGTCAAGTTGATATCAAAGTTGCAGCATCGAAATC 1916
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 1856 AAGGAATGGAAGAGTTCAAGAACGAGGTCAAGCTGATATCAAAGTTGCAGCATCGAAATC 1915
Query 1917 TAGTGAGGATCTTAGGATGTTGCGTTGAATTGGAAGAGAAGATGTTAATATACGAGTATT 1976
| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 1916 TCGTGAGGATCTTAGGATGTTGCGTTGAATTGGAAGAGAAGATGTTGGTATACGAGTATT 1975
Query 1977 TACCAAACAAGAGCCTAGACTATTTCATATTCCATGAAGAGCAGAGAGCGGAGTTGGATT 2036
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 1976 TACCAAACAAGAGCCTAGACTATTTCATATTCCATGAAGAGCAGAGAGCAGAGTTGGATT 2035
Query 2037 GGCCAAAACGGATGGAGATAATCCGCGGGATTGCTCGTGGAATCTTATATCTTCATCAAG 2096
|||||||| | ||||||||| |||| ||||||||||||||||||||||||||||||||||
Sbjct 2036 GGCCAAAAAGAATGGAGATAGTCCGAGGGATTGCTCGTGGAATCTTATATCTTCATCAAG 2095
Query 2097 ATTCAAAACTGAGAATCATCCACAGAGATCTCAAGGCCAGCAATATACTTCTTGACAGTG 2156
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2096 ATTCAAGACTGAGAATCATCCACAGAGATCTCAAGGCCAGCAATATACTTCTTGACAGTG 2155
Query 2157 AAATGATCCCTAAGATTTCGGATTTCGGCATGGCTAGAATCTTCGGGGGAAACCAAATCG 2216
|||||||||| |||||||| ||||||||||||||||||||||| ||||| |||||||| |
Sbjct 2156 AAATGATCCCAAAGATTTCAGATTTCGGCATGGCTAGAATCTTTGGGGGCAACCAAATGG 2215
Query 2217 AAGGATGCACAAGT 2230
||||||||||||||
Sbjct 2216 AAGGATGCACAAGT 2229
Score = 658 bits (356), Expect = 0.0
Identities = 392/410 (96%), Gaps = 0/410 (0%)
Strand=Plus/Plus
Query 2259 CCGACGTCTACAGCTTTGGAGTATTGATGTTAGAGATCATAACCGGAAAGAAAAACAGTG 2318
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2297 CCGACGTCTATAGCTTTGGAGTATTGATGTTAGAGATCATAACCGGAAAGAAAAACAGTG 2356
Query 2319 CTTTCCACGAGGAATCATCTAACTTAGTCGGACATATTTGGGATCTATGGGAAAACGGCG 2378
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 2357 CTTTCCACGAGGAATCATCTAACTTAGTCGGACATATTTGGGATCTATGGGAAAACGGTG 2416
Query 2379 AACCAACAGAGATCATAGACAAGTTAATGGACCAAGAGAGTTATGATGAGAGCGAAGTGA 2438
|| ||||||||||||||||||| |||||||||||||||| |||||||||||| |||||||
Sbjct 2417 AAGCAACAGAGATCATAGACAATTTAATGGACCAAGAGACTTATGATGAGAGAGAAGTGA 2476
Query 2439 TGAAGTGCATACACATTGGGTTGCTCTGTGTGCAAGAAAACGCTTCGGATAGAGTCGACA 2498
||||||||||||| ||||||||||||||||||||||||||||||||||| ||||| ||||
Sbjct 2477 TGAAGTGCATACAAATTGGGTTGCTCTGTGTGCAAGAAAACGCTTCGGACAGAGTAGACA 2536
Query 2499 TGTCCTCTGTTGTTATCATGTTGGGTCATAACGCCACTAATCTTCCGAATCCGAAGCATC 2558
||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 2537 TGTCCTCTGTTGTCATCATGTTGGGTCATAACGCCACTAATCTTCCGAATCCAAAGCATC 2596
Query 2559 CTGCGTTTACTTCCACGAGGAGGAGAGGCGGCGAAAATGGTGCTTGTCTCAAGGGAAAAA 2618
|||||||||||||| |||| ||||||||||| ||||||||||||||||| |||||| |||
Sbjct 2597 CTGCGTTTACTTCCGCGAGAAGGAGAGGCGGTGAAAATGGTGCTTGTCTTAAGGGACAAA 2656
Query 2619 CCGGTATTTCTGTTAATGATGTTACCTTCACCGACATTCAAGGTCGTTAA 2668
||||||||||||||||||| |||||||||| |||||||||||||||||||
Sbjct 2657 CCGGTATTTCTGTTAATGACGTTACCTTCAGCGACATTCAAGGTCGTTAA 2706
> AT1G11410.1 | Symbols: | S-locus lectin protein kinase family
protein | chr1:3841286-3844432 FORWARD LENGTH=2686
Length=2686
Score = 1733 bits (938), Expect = 0.0
Identities = 1699/2058 (83%), Gaps = 86/2058 (4%)
Strand=Plus/Plus
Query 227 TTCTTTTTCTCCCTC-T--TTCAATCTTG-TATCTCTGTTGATACGATCATGAGAAGACA 282
||||| |||||| || | |||||||||| || ||||| | || ||| ||||||| ||
Sbjct 28 TTCTTGTTCTCCTTCTTGATTCAATCTTGTTA-CTCTGACAACACAATCTTGAGAAGTCA 86
Query 283 GTCCTTGAGAGATGGTGATGTCATACACTCTGTAGGGAAGAGATTCGCATTTGGATTCTT 342
||| |||| |||||||||||| ||| |||||| ||| |||||||| || |||||||||||
Sbjct 87 GTCTTTGAAAGATGGTGATGTTATATACTCTGAAGGAAAGAGATTTGCTTTTGGATTCTT 146
Query 343 CAGTCTTGGGG-ATTCGAAGCTCCGGTATGTGGGGATTTGGTATGCTCAAATCACTCAAC 401
||| ||||||| |||| |||||| ||||||| |||||||||||||||||| || || | |
Sbjct 147 CAG-CTTGGGGAATTCAAAGCTCAGGTATGTTGGGATTTGGTATGCTCAAGTCTCTGAGC 205
Query 402 AGACTATTGTATGGGTTGCAAACAGAGACCATCCTATTAATGACACCTCTGGTCTGATAA 461
|||||||||||||||||||||| ||||| ||||||||||||||||| |||||||||||||
Sbjct 206 AGACTATTGTATGGGTTGCAAATAGAGATCATCCTATTAATGACACATCTGGTCTGATAA 265
Query 462 AGTTCAGTAACAGATGCAATCTCTGTGTGTATGCATCTGTCAATGGAACAGAGCCTATCT 521
||||||||| |||| | ||||| |||||||||||||||| |||||||||||||||||| |
Sbjct 266 AGTTCAGTACCAGAGGGAATCTTTGTGTGTATGCATCTGGCAATGGAACAGAGCCTATTT 325
Query 522 GGTCTACTGATGTT-TCAGATAGT-ATCTTGGAAACAACTTTAGTTGC-TAGACTCTCTG 578
|||||||||||||| | |||| | ||| ||| | |||||||||| || || ||||
Sbjct 326 GGTCTACTGATGTTAT-TGATA-TGATCCAAGAACCTGCTTTAGTTGCGAAG-CTATCTG 382
Query 579 ATTTAGGCAACCTTGTTCTGCTTGATCCAGTCACAGGGAGAAGTTTCTGGGAGAGCTTTG 638
||||||||||||||||||| |||||||| |||||||||| |||||||||||||||||||
Sbjct 383 ATTTAGGCAACCTTGTTCTACTTGATCCTGTCACAGGGAAAAGTTTCTGGGAGAGCTTTA 442
Query 639 ATCATCCTACAGACACTTTTCTTCCGTTTATGAGGATGGGTTTCACACG-AAAAGACGGT 697
||||||||||| ||||||| ||||| ||||||| | | || ||||| || |||| ||||
Sbjct 443 ATCATCCTACAAACACTTTGCTTCCCTTTATGAAGTTTGGATTCACTCGTCAAAG-CGGT 501
Query 698 TTGGATCGCT-TTCTGACATCATGGAAATCTCATGGGGACCCTGGTTGTGGAGAC-TTAA 755
||||||| | || |||| || |||| ||||| ||| ||||| |||| |||| || || |
Sbjct 502 GTGGATCG-TATTATGACGTCTTGGAGATCTCCTGGTGACCCGGGTTCTGGAAACATT-A 559
Query 756 CATTGCGGATGGAACGTAGAGGGTTTCCGCAGTTGATTCTGTACAAAGGTC-GAGTCCCG 814
||| ||||| ||||||||||||||||||||| |||| ||||||| |||| || | |
Sbjct 560 CATACCGGATAGAACGTAGAGGGTTTCCGCAGATGATGATGTACAAGGGTCTGACT-CTT 618
Query 815 TGGTGGCGTA-TGGGGTCGTGGACCGGGCATAGGTGGAGCGGTGTGCCTGAAATG-CCAA 872
|||||||||| | ||||| ||||| ||||| || ||||| ||||||||||||||| | ||
Sbjct 619 TGGTGGCGTACT-GGGTCATGGACAGGGCAAAGATGGAGTGGTGTGCCTGAAATGACAAA 677
Query 873 TAGGGTATATCTTCAATAACTCGTTTGTGAATAAT-GAGGACGAAGTATCCTTCACTTAC 931
| || ||||||||||| |||||||||||||||| | || |||||||| |||||||
Sbjct 678 CA-AGTTTATCTTCAATATCTCGTTTGTGAATAATCCA-GATGAAGTATCAATCACTTAT 735
Query 932 GGTGTGACAGATGCTTCAGTCATAACAAGAACCATGGTGAACGAGACTGGAAC-CATGCA 990
|| ||| ||||||||| || | |||||||| || | |||||||| ||||| | ||||
Sbjct 736 GGAGTGTTAGATGCTTCGGTTACAACAAGAATGGTGCTAAACGAGACAGGAACTC-TGCA 794
Query 991 CCGG-TTCACATGGATTGCGAGGGACAAGAGATGGAAT-GATTTCTGGTCAGTTCCTAAA 1048
||| ||| | |||| | ||| || |||| |||| || | |||||||||| ||| ||
Sbjct 795 ACGGTTTCGC-TGGAACGGGAGAGATAAGAAATGG-ATCGGGTTCTGGTCAGCTCCCGAA 852
Query 1049 GAGCAGTGCGATAACTAC-GCTCATTGTGGCCCTAACGGTTACTGTGA-TCCCCCTAGCT 1106
|| |||| || | |||| | || |||||| ||||||||||||||| ||| || || |
Sbjct 853 GATAAGTGTGACATCTACAAC-CACTGTGGCTTTAACGGTTACTGTGATTCCACC-AG-T 909
Query 1107 -CA-AAAACGTTTGAGTGCACATGCCTACCTGGTTTTGAGCCCAAGTTTCCCCG-GCATT 1163
|| | || |||||||||| | ||| |||| || | ||||| ||| || || | |||
Sbjct 910 ACAGAGAA-GTTTGAGTGCTCTTGCTTACCGGGGTACGAGCCTAAGACACCTCGAG-ATT 967
Query 1164 GGTTCTTGAGGGACT-CTTCTGG-CGGGTGTACCAAGAAAAAAGGAGCTTCAAGATGCAG 1221
|||||||||| || | |||| || ||||| || | || ||||| || ||| | ||| |
Sbjct 968 GGTTCTTGAGAGA-TGCTTC-GGATGGGTGCACGAGGATAAAAGCAGATTCGATATGTAA 1025
Query 1222 TGAGAAAGACGGGTTTGTGAAGTTAAAGCGCA-TGAAGATTCCTGACACGTCAGATG-CA 1279
|| |||||| ||||||| ||||| ||||| | |||||||||| | || |||| || |
Sbjct 1026 TGGGAAAGAAGGGTTTGCAAAGTTGAAGCG-AGTGAAGATTCCCAATACATCAGCTGTTA 1084
Query 1280 AGTGTGGATATGAACATAACATTTAAGGAGTGCAAACAGAGGTGCTTGAGGAACTGCTCT 1339
| ||||||||||||||||||| | ||||| || ||||||||||||||| |||||||||
Sbjct 1085 A-TGTGGATATGAACATAACACTGAAGGAATGTGAACAGAGGTGCTTGAAGAACTGCTCA 1143
Query 1340 TGTGTTGCTTATGCAAGTGCTTACCACGAGAGTAAAAGA-GGAGC-AATAGGATGCTTGA 1397
|||||||||||||| |||||||||||||||||| |||| ||||| || ||| |||||||
Sbjct 1144 TGTGTTGCTTATGCGAGTGCTTACCACGAGAGT-CAAGATGGAGCTAA-AGGGTGCTTGA 1201
Query 1398 CATGGCACAGTGGTATGTTGGATGCGAGGACATACTTGAGCTCCGGACAAGATTTCTACA 1457
|||||||| | |||||||||| | ||||||||||||||||| ||||| ||||||||
Sbjct 1202 CATGGCACGGCAATATGTTGGATACTAGGACATACTTGAGCTCAGGACAGGATTTCTATT 1261
Query 1458 TACGTGTAGACAAGGAAGAGTTAGCACTGTGGAACAGAAAGGGCTTATCAGGGAAGAGGA 1517
|||| ||||| ||| ||||||||| | |||||| |||| ||| ||| ||||||| ||
Sbjct 1262 TACGCGTAGATAAGTCAGAGTTAGCGCGGTGGAATGGAAATGGCGCATCGGGGAAGAAGA 1321
Query 1518 GAGTCCTTCTGATTCTTATCAGTTTGGTTGCAGCCGTAATGTTACTAACTG-TCA--TTT 1574
|| | || | ||||| ||||||||| |||||| ||| |||||||| |||| ||| |||
Sbjct 1322 GACTTGTTTTAATTCTCATCAGTTTGATTGCAGTCGTGATGTTACT-ACTGATCAGTTTT 1380
Query 1575 ---TGTTCTGTGT-CGTAAG-GGAG-CGACG-A-A-AGTCAAACAGGCATAG--AAGCTC 1623
|||| | | | | ||| | || | ||| | | |||| ||||||| ||| ||||||
Sbjct 1381 CACTGTTAT-T-TAAGGAAGCGAAGACAACGAACACAGTCTAACAGGCTTAGAAAAGCTC 1438
Query 1624 TTCGGCAAACTTCGC-CCCAGTCCCTTTCGATTTTGAAGAATCATTCAGA-TT--TGAGC 1679
| ||| |||||| || || | |||| ||| ||||||| ||||||| | || ||||
Sbjct 1439 --CATCAAGCTTCGCTCCGAG-CTCTTTTGATCTTGAAGACTCATTCATACTTGAAGAGC 1495
Query 1680 ---AAGACAAGGCGAGAAACCGGGAGTTACCTTTCTTTGATCTTAACACGATCGCTGCAG 1736
| ||||| | |||| ||||||||| ||| ||||||| |||| |||||| ||| |||
Sbjct 1496 TTGAGGACAAATCAAGAAGCCGGGAGTTGCCTCTCTTTGAGCTTAGCACGATTGCTACAG 1555
Query 1737 CAGCGAATAACTTCT-CTTCCCAAAACAAGCTTGGAGCAGGTGGTTTCGGACCCGTTTAT 1795
|| ||||||| || | ||| |||||||||||||||||||||||||| ||||| ||||||
Sbjct 1556 CAACGAATAA-TTTTGCTTTTCAAAACAAGCTTGGAGCAGGTGGTTTTGGACCTGTTTAT 1614
Query 1796 AAGGGCGTGTTACAAAACGGTATGGAGATAGCGGTGAAGAGGTTGTCGAAAAA-CTCGGG 1854
|| || ||||||||||| |||||||| ||||| |||||||||||||| ||||| ||| ||
Sbjct 1615 AAAGGTGTGTTACAAAATGGTATGGAAATAGCAGTGAAGAGGTTGTC-AAAAAGCTCAGG 1673
Query 1855 GCAAGGAATGGAAGAGTTCAAGAACGAGGTCAAGTTGATATCAAAGTTGCAGCATCGAAA 1914
||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||
Sbjct 1674 TCAAGGAATGGAAGAGTTCAAGAACGAGGTCAAGTTGATATCGAAGCTGCAGCATCGAAA 1733
Query 1915 TCTAGTGAGGATCTTAGGATGTTGCGTTGAATTGGAAGAGAAGATGTTAATATACGAGTA 1974
||| |||||||||||||||||||| |||||||| |||||||||||||| ||||||||||
Sbjct 1734 TCTCGTGAGGATCTTAGGATGTTGTGTTGAATTTGAAGAGAAGATGTTGGTATACGAGTA 1793
Query 1975 TTTACCAAACAAGAGCCTAGACTATTTCATATTCCATGAAGAGCAGAGAGCGGAGTTGGA 2034
||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||
Sbjct 1794 TTTACCAAACAAGAGCCTAGACTATTTCATATTCCATGAAGAGCAAAGAGCAGAGTTGGA 1853
Query 2035 TTGGCCAAAACGGATGGAGATAATCCGCGGGATTGCTCGTGGAATCTTATATCTTCATCA 2094
|||||||||| | |||| ||||||||||||||||| ||||||||||||||| ||||||||
Sbjct 1854 TTGGCCAAAAAGAATGGGGATAATCCGCGGGATTGGTCGTGGAATCTTATACCTTCATCA 1913
Query 2095 AGATTCAAAACTGAGAATCATCCACAGAGATCTCAAGGCCAGCAATATACTTCTTGACAG 2154
|||||||| ||||| |||||||||||||| || |||||||||||| ||||||||||||
Sbjct 1914 AGATTCAAGGCTGAGGATCATCCACAGAGACCTTAAGGCCAGCAATGTACTTCTTGACAA 1973
Query 2155 TGAAATGATCCCTAAGATTTCGGATTTCGGCATGGCTAGAATCTTCGGGGGAAACCAAAT 2214
||||||||| || |||||| ||||||||||| |||||||||||||||| || ||||||||
Sbjct 1974 TGAAATGATACCGAAGATTGCGGATTTCGGCCTGGCTAGAATCTTCGGAGGCAACCAAAT 2033
Query 2215 CGAAGGATGCACAAGTCG 2232
||||||| |||||| |||
Sbjct 2034 CGAAGGAAGCACAAATCG 2051
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 132490896463
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5