BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg471279
Length=2676
Score E
Sequences producing significant alignments: (Bits) Value
AT1G11410.1 | Symbols: | S-locus lectin protein kinase family ... 4181 0.0
AT1G11340.1 | Symbols: | S-locus lectin protein kinase family ... 2139 0.0
> AT1G11410.1 | Symbols: | S-locus lectin protein kinase family
protein | chr1:3841286-3844432 FORWARD LENGTH=2686
Length=2686
Score = 4181 bits (2264), Expect = 0.0
Identities = 2553/2692 (95%), Gaps = 22/2692 (1%)
Strand=Plus/Plus
Query 1 ATGAAGTTCTTCTTTATCTTTTTCATTTTCTTATTTTCCCTCTTGATTCAATCTTGTTAC 60
|||||||||||||||||||||||||||||||| || ||| ||||||||||||||||||||
Sbjct 1 ATGAAGTTCTTCTTTATCTTTTTCATTTTCTTGTTCTCCTTCTTGATTCAATCTTGTTAC 60
Query 61 TCTGACAACACAATCTTGAGAAGACAGTCTTTGAAAGATGGTGATGTTATATTCTCTGAA 120
||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||
Sbjct 61 TCTGACAACACAATCTTGAGAAGTCAGTCTTTGAAAGATGGTGATGTTATATACTCTGAA 120
Query 121 GGAAAAAGATTTGCTTTTGGATTCTTCAGCTTGGGGAATTCAAAGCTCAGGTATGTTGGG 180
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 121 GGAAAGAGATTTGCTTTTGGATTCTTCAGCTTGGGGAATTCAAAGCTCAGGTATGTTGGG 180
Query 181 ATTTGGTATGCTCAAGTCTCTGAACAGACTGTTGTATGGGTTGCAAATAGAGACCATCCT 240
||||||||||||||||||||||| |||||| |||||||||||||||||||||| ||||||
Sbjct 181 ATTTGGTATGCTCAAGTCTCTGAGCAGACTATTGTATGGGTTGCAAATAGAGATCATCCT 240
Query 241 ATTAATGACACATCTGGTCTGATAAAGTTCAGTACCAGAGGGAATCTTTGTGTGTATGCA 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 241 ATTAATGACACATCTGGTCTGATAAAGTTCAGTACCAGAGGGAATCTTTGTGTGTATGCA 300
Query 301 TCTGTCAATGGAACAGAGCCTATCTGGTCTACTGATGTTATTGATATGATCCAAGAACCG 360
|||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 301 TCTGGCAATGGAACAGAGCCTATTTGGTCTACTGATGTTATTGATATGATCCAAGAACCT 360
Query 361 GCTTTAGTTGCGAAGCTAACTGATTTAGGCAACCTTGTTCTACTTGATCCTGTCACTGGG 420
|||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||
Sbjct 361 GCTTTAGTTGCGAAGCTATCTGATTTAGGCAACCTTGTTCTACTTGATCCTGTCACAGGG 420
Query 421 AAAAGTTTTTGGGAGAGCTTTAATCATCCTACAAACACTTTGCTTCCTTTTATGAAGTTA 480
|||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 421 AAAAGTTTCTGGGAGAGCTTTAATCATCCTACAAACACTTTGCTTCCCTTTATGAAGTTT 480
Query 481 GGATTCACTCGTCAAAACGGTGTGGATCGTATTATGACATCTTGGAGATCTCCTGGTGAC 540
|||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||
Sbjct 481 GGATTCACTCGTCAAAGCGGTGTGGATCGTATTATGACGTCTTGGAGATCTCCTGGTGAC 540
Query 541 CCGGGTTCTGGAAACATTACATACCGGATAGAACGTAGAGGGTTTCCGCAGATGATGATG 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 541 CCGGGTTCTGGAAACATTACATACCGGATAGAACGTAGAGGGTTTCCGCAGATGATGATG 600
Query 601 TACAAGGGTCTGACTCTGTGGTGGCGTACTGGATCATGGACAGGGCAAAGATGGAGTGGT 660
||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||
Sbjct 601 TACAAGGGTCTGACTCTTTGGTGGCGTACTGGGTCATGGACAGGGCAAAGATGGAGTGGT 660
Query 661 GTGCCTGAAATGACAAACAAGTTTATCTTCAATATCTCCTTTGTGAATACTCCAGATGAA 720
|||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||
Sbjct 661 GTGCCTGAAATGACAAACAAGTTTATCTTCAATATCTCGTTTGTGAATAATCCAGATGAA 720
Query 721 GTATCGATCACTTACGGAGTGTTGGATGCTTCGGTTACAACACGAATGGTGCTAAACGAG 780
||||| |||||||| |||||||| |||||||||||||||||| |||||||||||||||||
Sbjct 721 GTATCAATCACTTATGGAGTGTTAGATGCTTCGGTTACAACAAGAATGGTGCTAAACGAG 780
Query 781 ACGGGAACTCTGCAACGGTT-CAGATGGAACGGGAGAGATAAGAAATGGATTGGGTTCTG 839
|| ||||||||||||||||| | | |||||||||||||||||||||||||| ||||||||
Sbjct 781 ACAGGAACTCTGCAACGGTTTC-GCTGGAACGGGAGAGATAAGAAATGGATCGGGTTCTG 839
Query 840 GTCAGCTCCCGAAGATAAGTGTGACATCTACAACCACTGTGGTTTTAACGGTTACTGTGA 899
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 840 GTCAGCTCCCGAAGATAAGTGTGACATCTACAACCACTGTGGCTTTAACGGTTACTGTGA 899
Query 900 TCCCACCAGTACAGACAAGTTTGAGTGCTCTTGCTTACCGGGCTACGAGCCTAAGACACC 959
| ||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||
Sbjct 900 TTCCACCAGTACAGAGAAGTTTGAGTGCTCTTGCTTACCGGGGTACGAGCCTAAGACACC 959
Query 960 CCGAGATTGGTTCTTGAGGGATGCTTCGGATGGTTGCACGAGGATAAAAGCAGCTTCGAT 1019
||||||||||||||||| |||||||||||||| ||||||||||||||||||| ||||||
Sbjct 960 TCGAGATTGGTTCTTGAGAGATGCTTCGGATGGGTGCACGAGGATAAAAGCAGATTCGAT 1019
Query 1020 ATGTAATGGGAAAGAAGGGTTTGCAAAGTTGAAGCGAGTGAAGATTCCCAATACATCAGC 1079
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1020 ATGTAATGGGAAAGAAGGGTTTGCAAAGTTGAAGCGAGTGAAGATTCCCAATACATCAGC 1079
Query 1080 TGTTAATGTAGATATGAACATAACATTGAAGGAATGCGAACAGAGGTGCTTGAAGAACTG 1139
||||||||| ||||||||||||||| |||||||||| |||||||||||||||||||||||
Sbjct 1080 TGTTAATGTGGATATGAACATAACACTGAAGGAATGTGAACAGAGGTGCTTGAAGAACTG 1139
Query 1140 CTCTTGTGTCGCTTATGCGAGTGCTTACCATGAGAGTGAAAACGGAGCAAAAGGGTGCTT 1199
||| ||||| |||||||||||||||||||| |||||| || | ||||| |||||||||||
Sbjct 1140 CTCATGTGTTGCTTATGCGAGTGCTTACCACGAGAGTCAAGATGGAGCTAAAGGGTGCTT 1199
Query 1200 GACATGGCACGGCAATATGCTGGATACAAGGACATACTTGAGCTCGGGACAAGATTTCTA 1259
||||||||||||||||||| ||||||| ||||||||||||||||| ||||| ||||||||
Sbjct 1200 GACATGGCACGGCAATATGTTGGATACTAGGACATACTTGAGCTCAGGACAGGATTTCTA 1259
Query 1260 CCTACGCGTAGATAAGTCAGAGTTAGTGCGGTGGAATGGAAATGGCTCATCAGGGAAGAT 1319
|||||||||||||||||||||||| ||||||||||||||||||| |||| |||||||
Sbjct 1260 TTTACGCGTAGATAAGTCAGAGTTAGCGCGGTGGAATGGAAATGGCGCATCGGGGAAGAA 1319
Query 1320 GAGACtttttttAATTCTCATCAGTTTGCTTGCAGTCGTCATGTTACTTA-TGATCAGTT 1378
||||||| |||||||||||||||||||| |||||||||| |||||||| | |||||||||
Sbjct 1320 GAGACTTGTTTTAATTCTCATCAGTTTGATTGCAGTCGTGATGTTACT-ACTGATCAGTT 1378
Query 1379 TGTT-CTGTT-TC-AT--AAG-GAA-AC---GAAGACAGTTTAAAAGGCTGAGAAGAGCT 1428
| | ||||| | | ||| ||| || ||| ||||| ||| ||||| |||| ||||
Sbjct 1379 T-TCACTGTTATTTAAGGAAGCGAAGACAACGAACACAGTCTAACAGGCTTAGAAAAGCT 1437
Query 1429 CCATCAAGCTTCGCTCCGAGCTCTTTTGATCTTGAAGACTCATTCATACTTGAAGAGCTT 1488
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1438 CCATCAAGCTTCGCTCCGAGCTCTTTTGATCTTGAAGACTCATTCATACTTGAAGAGCTT 1497
Query 1489 GAGGACAAATCAAGAACCCGGGAGTTGCCTCTCTTTGAGCTTAGCACGATTGCTGCAGCA 1548
|||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||
Sbjct 1498 GAGGACAAATCAAGAAGCCGGGAGTTGCCTCTCTTTGAGCTTAGCACGATTGCTACAGCA 1557
Query 1549 ACGAATAACTTCGCTTTTCAAAACAAGCTTGGAGCAGGTGGTTTTGGACCGGTTTATAAG 1608
|||||||| || |||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 1558 ACGAATAATTTTGCTTTTCAAAACAAGCTTGGAGCAGGTGGTTTTGGACCTGTTTATAAA 1617
Query 1609 GGAGTGTTACAAAATGGTATGGAAATAGCAGTGAAGAGGTTGTCAAAAAGCTCGGGGCAA 1668
|| |||||||||||||||||||||||||||||||||||||||||||||||||| || |||
Sbjct 1618 GGTGTGTTACAAAATGGTATGGAAATAGCAGTGAAGAGGTTGTCAAAAAGCTCAGGTCAA 1677
Query 1669 GGAATGGAAGAGTTCAAGAACGAGGTCAAGTTGATATCGAAGTTGCAGCATCGAAATCTC 1728
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 1678 GGAATGGAAGAGTTCAAGAACGAGGTCAAGTTGATATCGAAGCTGCAGCATCGAAATCTC 1737
Query 1729 GTGAGGATCTTAGGATGTTGTGTTGAATTTGAAGAGAAGATGCTGGTATACGAGTATTTA 1788
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 1738 GTGAGGATCTTAGGATGTTGTGTTGAATTTGAAGAGAAGATGTTGGTATACGAGTATTTA 1797
Query 1789 CCAAACAAGAGCCTAGACTATTTCATATTCAATGAGGAGCATAGAGTGGAGTTGGATTGG 1848
|||||||||||||||||||||||||||||| |||| ||||| |||| ||||||||||||
Sbjct 1798 CCAAACAAGAGCCTAGACTATTTCATATTCCATGAAGAGCAAAGAGCAGAGTTGGATTGG 1857
Query 1849 CCAAAACGAATGGGGATAATCCGCGGGATTGCG-CGTGGAATCTTATATCTTCATCAAGA 1907
|||||| |||||||||||||||||||||||| | |||||||||||||| |||||||||||
Sbjct 1858 CCAAAAAGAATGGGGATAATCCGCGGGATTG-GTCGTGGAATCTTATACCTTCATCAAGA 1916
Query 1908 TTCAAGGCTGAGGATCATCCACAGAGACCTCAAGGCCAGCAATGTACTTCTTGACAATGA 1967
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 1917 TTCAAGGCTGAGGATCATCCACAGAGACCTTAAGGCCAGCAATGTACTTCTTGACAATGA 1976
Query 1968 AATGATACCGAAGATTGCGGATTTCGGCCTGGCTAGAATCTTCGGGGGCAACCAAATCGA 2027
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 1977 AATGATACCGAAGATTGCGGATTTCGGCCTGGCTAGAATCTTCGGAGGCAACCAAATCGA 2036
Query 2028 AGGAAGCACAAATCGAGTCGTCGGAACATACGGATACATGTCACCAGAGTATGCAATGGA 2087
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 2037 AGGAAGCACAAATCGAGTCGTCGGAACATATGGATACATGTCACCAGAGTATGCAATGGA 2096
Query 2088 CGGCCAGTTCTCTATTAAATCCGATGTCTACAGCTTTGGAGTATTGATCTTAGAGATCAT 2147
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 2097 CGGCCAGTTCTCTATTAAATCCGATGTATACAGCTTTGGAGTATTGATCTTAGAGATCAT 2156
Query 2148 AACCGGAAAGAAAAACAGTGCTTTCTATGAGGAATCTTTGAATCTAGTCAAACATATTTG 2207
||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 2157 AACCGGAAAGAGAAACAGTGCTTTTTATGAGGAATCTTTGAATCTAGTCAAACATATTTG 2216
Query 2208 GGATCGATGGGAAAAAGGTGAAGCTATAGAGATCATAGACAAATTAATGAGTGAAGATAC 2267
||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||| ||
Sbjct 2217 GGATCGATGGGAAAATGGTGAAGCTATAGAGATCATAGACAAATTAATGGGTGAAGAGAC 2276
Query 2268 TTATGATGTGAGCGAAGTGATGAAGTGCTTACACATTGGGTTGCTTTGCGTGCAAGAAAA 2327
||||||| | ||||||| ||||||||||||||||||||||| |||||||||||||||||
Sbjct 2277 GTATGATGAGGGCGAAGTAATGAAGTGCTTACACATTGGGTTACTTTGCGTGCAAGAAAA 2336
Query 2328 CGT-TTCAGACAGACCAGACATGTCCTCTGTTGTCTTCATGTTAGGCCATAACGCCATTG 2386
| | |||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 2337 C-TCTTCAGACAGACCAGACATGTCCTCTGTTGTCTTCATGTTAGGTCATAACGCCATTG 2395
Query 2387 ATCTTCCATCTCCGAAGCATCCTGCGTTTACGGCGGGAAGAAGGAGAAACGTCAAAACTG 2446
||||||||||||||||||||||||| |||||||||||||| ||||||||| ||||||||
Sbjct 2396 ATCTTCCATCTCCGAAGCATCCTGCATTTACGGCGGGAAGGAGGAGAAACACCAAAACTG 2455
Query 2447 GCGGCAGCTCAGATAATTGGCCCAGCGGAGAAACCGGCAGTACTATTAACGACGTTACCC 2506
||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
Sbjct 2456 GCGGCAGCTCAGATAATTGGCCCAGCGGAGAAACCAGCAGTACTATTAACGACGTTACTC 2515
Query 2507 TCACCGATGTTCAAGGTCGTTAAGAAGTGTTTTCCTCTTCTTTATAAACTAAGAAGCCTA 2566
|||||||||||||||||||||||||||||| |||||||||||||||| |||||||| |||
Sbjct 2516 TCACCGATGTTCAAGGTCGTTAAGAAGTGTATTCCTCTTCTTTATAATCTAAGAAGACTA 2575
Query 2567 TAGGTATCAATTTATAGCAATACTTGTTATATAGAAAATTATTTGTATAAAATGTATGCA 2626
||||||||||||||||| |||||||||||||||||||||||| ||| |||| |||||||
Sbjct 2576 TAGGTATCAATTTATAGTAATACTTGTTATATAGAAAATTATGTGTTTAAAGCGTATGCA 2635
Query 2627 A-CATTATTTTTATAAAGTT-ACAAATACCTAATGAAAAGAAAAGTTAGCCT 2676
| | |||||| ||||||||| |||||||||||||||||||||||||||||||
Sbjct 2636 AAC-TTATTTGTATAAAGTTTACAAATACCTAATGAAAAGAAAAGTTAGCCT 2686
> AT1G11340.1 | Symbols: | S-locus lectin protein kinase family
protein | chr1:3814116-3817420 REVERSE LENGTH=2706
Length=2706
Score = 2139 bits (1158), Expect = 0.0
Identities = 2001/2402 (83%), Gaps = 82/2402 (3%)
Strand=Plus/Plus
Query 70 ACAATCT-TGAGAAGACAGTCTTTGAAAGATGGTGATGTTATATTCTCTGAAGGAAAAAG 128
||||| | ||||||||||||| |||| ||||||||| |||||| |||| | ||| || ||
Sbjct 265 ACAAT-TATGAGAAGACAGTCCTTGAGAGATGGTGAGGTTATACTCTCCGCAGGGAAGAG 323
Query 129 ATTTGCTTTTGGATTCTTCAG-CTTGGGGAATTCAAAGCTCAGGTATGTTGGGATTTGGT 187
||| || |||||||||||||| ||||||| ||||| ||||| ||||||||||||||||||
Sbjct 324 ATTCGCGTTTGGATTCTTCAGTCTTGGGG-ATTCAGAGCTCCGGTATGTTGGGATTTGGT 382
Query 188 ATGCTCAAGTCTCTGAACAGACTGTTGTATGGGTTGCAAATAGAGACCATCCTATTAATG 247
|||||||| ||||| |||||||| |||| ||||||||||| |||||||||||||||||||
Sbjct 383 ATGCTCAAATCTCTCAACAGACTATTGTTTGGGTTGCAAACAGAGACCATCCTATTAATG 442
Query 248 ACACATCTGGTCTGATAAAGTTCAGTACCAGAGGGAATCTTTGTGTGTATGCATCTGTCA 307
|||| ||||| || |||||||||| | |||||| ||||| | ||| |||||||||| ||
Sbjct 443 ACACCTCTGGGATGGTAAAGTTCAGCAACAGAGGCAATCTCTCTGTCTATGCATCTGACA 502
Query 308 ATGGAACAGAGCCTATCTGGTCTACTGATGTTAT-TGATATG-ATCCAAGAACCGGCTTT 365
||| |||||||| ||||||||| || ||||| | |||| | || ||||| ||||
Sbjct 503 ATGAAACAGAGCTTATCTGGTCAACAAATGTT-TCAGATA-GTATGTTGGAACCAACTTT 560
Query 366 AGTTGCGA-AGCTAACTGATTTAGGCAACCTTGTTCTACTTGATCCTGTCACTGGGAAAA 424
|||||| | | || |||||||||||||||||||||| ||||||| ||||| |||| ||
Sbjct 561 AGTTGCTACA-CTCTCTGATTTAGGCAACCTTGTTCTGTTTGATCCAGTCACAGGGAGAA 619
Query 425 GTTTTTGGGAGAGCTTTAATCATCCTACAAACAC-TTTGCTTCCTTTTATGAAG-TTAGG 482
|||| |||||||||||| |||| |||||| |||| ||| ||||| |||||| || || ||
Sbjct 620 GTTTCTGGGAGAGCTTTGATCACCCTACAGACACGTTT-CTTCCGTTTATG-AGATTGGG 677
Query 483 ATTCACTCGTCAAA-ACGGTGTGGATCGTAT-TATGACATCTTGG-AGATCTCCTGGTGA 539
|||||| || ||| ||||| ||||||| | | | ||||| ||| || |||| ||||||
Sbjct 678 ATTCACACG-AAAAGACGGTTTGGATCG-CTCTCTAACATCATGGAAG-TCTCATGGTGA 734
Query 540 CCCGGGTTCTGGAAACATTACATAC--CGGATAGAACGTAGAGGGTTTCCGCAGATGATG 597
||| ||||||||| || ||| |||| ||||| ||||||||||||||||| ||| ||||
Sbjct 735 CCCTGGTTCTGGAGAC-TTA-ATACTGCGGATGGAACGTAGAGGGTTTCCACAGTTGATT 792
Query 598 ATGTACAAGGGTCTGACTCTGTGGTGGCGTACT-GGATCATGGACAGGGCAAAGATGGAG 656
||||||| ||| | || | |||||||||| | || |||||||| ||||| || |||||
Sbjct 793 CTGTACAAAGGTGTAACCCCATGGTGGCGTA-TGGGGTCATGGACCGGGCATAGGTGGAG 851
Query 657 TGGTGTGCCTGAAATGACAAACA-AGTTTATCTTCAATATCTCCTTTGTGAATACTCCA- 714
|| |||||||||||| | || | || |||||||||| ||| |||||||||| | |
Sbjct 852 CGGGGTGCCTGAAATG-CCAATAGGGTACATCTTCAATAACTCATTTGTGAATAAT-GAG 909
Query 715 GATGAAGTATCGATCACTTACGGAGTGTTGGATGCTTCGGTTACAACACGAATGGTGCTA 774
|| |||||||| |||||||||| ||| ||||||||||| | |||| ||| || |
Sbjct 910 GACGAAGTATCCTTCACTTACGGTGTGACAGATGCTTCGGTCATAACAAGAACCATGGTG 969
Query 775 AACGAGACGGGAACTC-TGCAACGGTTCAGATGGAACGGGAGAGATAAGAAATGGATTGG 833
|||||||| ||||| | |||| ||||| | ||||| | ||| || |||| ||||| ||
Sbjct 970 AACGAGACTGGAAC-CATGCACCGGTTTACATGGATTGCGAGGGACAAGAGATGGAATGA 1028
Query 834 GTTCTGGTCAGCTCCCGAAGATAAGTGTGACATCTACAAC-CACTGTGGTTTTAACGGTT 892
|||||||||| ||| |||| |||| || | |||| | || ||||| ||||||||
Sbjct 1029 TTTCTGGTCAGTTCCTAAAGAGCAGTGCGATAACTAC-GCTCATTGTGGCCCTAACGGTT 1087
Query 893 ACTGTGA-TCCCACCAG-TACAGACAA-GTTTGAGTGCTCTTGCTTACCGGGCTACGAGC 949
||||||| |||| | || | || | || |||||||||| | ||| |||| || | ||||
Sbjct 1088 ACTGTGATTCCC-CTAGCT-CA-AAAACGTTTGAGTGCACATGCCTACCTGGTTTTGAGC 1144
Query 950 CTAAGACACCCCGAG-ATTGGTTCTTGAGGGA-TGCTTC-GGATGGTTGCACGAGGATAA 1006
| ||| ||||| | |||||||||||||||| | |||| || || || || | || ||
Sbjct 1145 CCAAGTTTCCCCG-GCATTGGTTCTTGAGGGACT-CTTCTGG-CGGGTGTACAAAGA-AA 1200
Query 1007 AAG-CAGCTTCGATATGTAATGGGAAAGAAGGGTTTGCAAAGTTGAAGCG-AGTGAAGAT 1064
||| |||||| ||||| | || |||||| ||||||| ||||| ||||| | |||||||
Sbjct 1201 AAGAGAGCTTCAATATGCAGTGAGAAAGACGGGTTTGTGAAGTTAAAGCGCA-TGAAGAT 1259
Query 1065 TCCCAATACATCAGCTGTTAA-TGTAGATATGAACATAACATTGAAGGAATGCGAACAGA 1123
|||| | ||||||| || || ||| ||||||||||||||||||||||| ||| ||||||
Sbjct 1260 TCCCGACACATCAGATG-CAAGTGTGGATATGAACATAACATTGAAGGAGTGCAAACAGA 1318
Query 1124 GGTGCTTGAAGAACTGCTCTTGTGTCGCTTATGCGAGTGCTTACCATGAGAGTGAAAA-C 1182
||||||||||||||||||||||||||||||| || ||||||||||| |||||| ||||
Sbjct 1319 GGTGCTTGAAGAACTGCTCTTGTGTCGCTTACGCAAGTGCTTACCACGAGAGT-AAAAGA 1377
Query 1183 GGAGCAAAAGGGTGCTTGACATGGCACGGCAATATGCTGGATACAAGGACATACTTGAGC 1242
||||||| ||| ||||||| |||||| || |||| ||||| ||||||||||||||| |
Sbjct 1378 GGAGCAATAGGATGCTTGAAATGGCATGGTGGTATGTTGGATGCAAGGACATACTTGAAC 1437
Query 1243 TCGGGACAAGATTTCTACCTACGCGTAGATAAGTCAGAGTTAGTGCGGTGGAATGGAAAT 1302
|||||||||||||||||| |||| ||||| ||| |||||||| ||||||||| |||||
Sbjct 1438 TCGGGACAAGATTTCTACATACGTGTAGACAAGGAAGAGTTAGCGCGGTGGAACAGAAAT 1497
Query 1303 GGCTCATCAGGGAAGATGAGACtttttttAATTCTCATCAGTTTGCTTGCAGTCGTCATG 1362
|||| ||||||||||| |||| | || | ||||| ||||||||| |||||| ||| |||
Sbjct 1498 GGCTTATCAGGGAAGAGGAGAGTCCTTCTGATTCTTATCAGTTTGATTGCAGCCGTAATG 1557
Query 1363 TTACTTA-TGATCAGTTTGTTCTGT-TTCATAAGGAAACGAAGACAGTTTAAA-AGGC-T 1418
||||| | || ||| |||||||||| || ||||| | ||| || || | ||| |||| |
Sbjct 1558 TTACTAACTG-TCATTTTGTTCTGTGTT-GTAAGGGAGCGACGAAAG-TCAAACAGGCAT 1614
Query 1419 GAGAAGAGCTCCATCAAGCTTCGCTCCGAG-CTCTTTTGATCTTGAAGACTCATTCATAC 1477
||||| || | ||| |||||| ||| | | |||||||| |||| || ||||| | |
Sbjct 1615 -AGAAGCTCTTCGGCAAACTTCGCCCCG-GTCCCTTTTGATTTTGACGAATCATTTAGAT 1672
Query 1478 TTGAAGAGCTTGAGGACAAATCAAGAACCCGGGAGTTGCCTCTCTTTGAGCTTAGCACGA 1537
||| | | | | ||||| | |||| ||||||||| ||| | ||||| |||| |||||
Sbjct 1673 TTG-A-A-C---AAGACAAGGCGAGAAACCGGGAGTTACCTTTATTTGATCTTAACACGA 1726
Query 1538 TTGCTGCAGCAACGAATAACTTCGCTTTTCAAAACAAGCTTGGAGCAGGTGGTTTTGGAC 1597
| | ||||||||| ||||||||| ||| |||||||||||||||||||||||||| ||||
Sbjct 1727 TCGTTGCAGCAACAAATAACTTCTCTTCCCAAAACAAGCTTGGAGCAGGTGGTTTCGGAC 1786
Query 1598 CGGTTTATAAGGGAGTGTTACAAAATGGTATGGAAATAGCAGTGAAGAGGTTGTC-AAAA 1656
| ||||||||||| ||||||||||| ||||||| ||||| |||||||||||||| | ||
Sbjct 1787 CTGTTTATAAGGGCGTGTTACAAAACCGTATGGAGATAGCGGTGAAGAGGTTGTCGAGAA 1846
Query 1657 AGCTCGGGGCAAGGAATGGAAGAGTTCAAGAACGAGGTCAAGTTGATATCGAAGTTGCAG 1716
| |||||| ||||||||||||||||||||||||||||||||| ||||||| |||||||||
Sbjct 1847 A-CTCGGGACAAGGAATGGAAGAGTTCAAGAACGAGGTCAAGCTGATATCAAAGTTGCAG 1905
Query 1717 CATCGAAATCTCGTGAGGATCTTAGGATGTTGTGTTGAATTTGAAGAGAAGATGCTGGTA 1776
|||||||||||||||||||||||||||||||| |||||||| |||||||||||| |||||
Sbjct 1906 CATCGAAATCTCGTGAGGATCTTAGGATGTTGCGTTGAATTGGAAGAGAAGATGTTGGTA 1965
Query 1777 TACGAGTATTTACCAAACAAGAGCCTAGACTATTTCATATTCAATGAGGAGCATAGAGTG 1836
|||||||||||||||||||||||||||||||||||||||||| |||| ||||| ||||
Sbjct 1966 TACGAGTATTTACCAAACAAGAGCCTAGACTATTTCATATTCCATGAAGAGCAGAGAGCA 2025
Query 1837 GAGTTGGATTGGCCAAAACGAATGGGGATAATCCGCGGGATTGCGCGTGGAATCTTATAT 1896
|||||||||||||||||| |||||| |||| |||| |||||||| |||||||||||||||
Sbjct 2026 GAGTTGGATTGGCCAAAAAGAATGGAGATAGTCCGAGGGATTGCTCGTGGAATCTTATAT 2085
Query 1897 CTTCATCAAGATTCAAGGCTGAGGATCATCCACAGAGACCTCAAGGCCAGCAATGTACTT 1956
||||||||||||||||| ||||| |||||||||||||| ||||||||||||||| |||||
Sbjct 2086 CTTCATCAAGATTCAAGACTGAGAATCATCCACAGAGATCTCAAGGCCAGCAATATACTT 2145
Query 1957 CTTGACAATGAAATGATACCGAAGATTGCGGATTTCGGCCTGGCTAGAATCTTCGGGGGC 2016
||||||| ||||||||| || |||||| | ||||||||| ||||||||||||| ||||||
Sbjct 2146 CTTGACAGTGAAATGATCCCAAAGATTTCAGATTTCGGCATGGCTAGAATCTTTGGGGGC 2205
Query 2017 AACCAAATCGAAGGAAGCACAAATCGAGTCGTCGGAACATACGGATACATGTCACCAGAG 2076
|||||||| |||||| |||||| | | ||||||||||||| |||||| ||| |||| |||
Sbjct 2206 AACCAAATGGAAGGATGCACAAGTAGGGTCGTCGGAACATTCGGATATATGGCACCGGAG 2265
Query 2077 TATGCAATGGACGGCCAGTTCTCTATTAAATCCGATGTCTACAGCTTTGGAGTATTGATC 2136
||||||||||| || |||||||| ||||||||||| ||||| |||||||||||||||||
Sbjct 2266 TATGCAATGGAGGGACAGTTCTCCATTAAATCCGACGTCTATAGCTTTGGAGTATTGATG 2325
Query 2137 TTAGAGATCATAACCGGAAAGAAAAACAGTGCTTTCTATGAGGAATCTT-TGAATCT-AG 2194
|||||||||||||||||||||||||||||||||||| | |||||||| | | || || ||
Sbjct 2326 TTAGAGATCATAACCGGAAAGAAAAACAGTGCTTTCCACGAGGAATCATCT-AA-CTTAG 2383
Query 2195 TCAAACATATTTGGGATCGATGGGAAAAAGGTGAAGCTATAGAGATCATAGACAAATTAA 2254
|| |||||||||||||| ||||||||| |||||||| | ||||||||||||||| ||||
Sbjct 2384 TCGGACATATTTGGGATCTATGGGAAAACGGTGAAGCAACAGAGATCATAGACAATTTAA 2443
Query 2255 TG-AGTGAAGATACTTATGATGTGAGCGAAGTGATGAAGTGCTTACACATTGGGTTGCTT 2313
|| | |||| |||||||||| ||| ||||||||||||||| |||| |||||||||||
Sbjct 2444 TGGACC-AAGAGACTTATGATGAGAGAGAAGTGATGAAGTGCATACAAATTGGGTTGCTC 2502
Query 2314 TGCGTGCAAGAAAACGTTTCAGACAGACCAGACATGTCCTCTGTTGTCTTCATGTTAGGC 2373
|| ||||||||||||| ||| |||||| ||||||||||||||||||| ||||||| ||
Sbjct 2503 TGTGTGCAAGAAAACGCTTCGGACAGAGTAGACATGTCCTCTGTTGTCATCATGTTGGGT 2562
Query 2374 CATAACGCCATTGATCTTCC-ATCTCCGAAGCATCCTGCGTTTACGGCGG-GAAGAAGGA 2431
|||||||||| | ||||||| | ||| ||||||||||||||||| | | || ||||||
Sbjct 2563 CATAACGCCACTAATCTTCCGAA-TCCAAAGCATCCTGCGTTTACTTCCGCGA-GAAGGA 2620
Query 2432 GA 2433
||
Sbjct 2621 GA 2622
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 132892232007
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5