BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg471307
Length=1743
Score E
Sequences producing significant alignments: (Bits) Value
AT1G11680.1 | Symbols: CYP51G1, EMB1738, CYP51A2, CYP51 | CYTOC... 2591 0.0
> AT1G11680.1 | Symbols: CYP51G1, EMB1738, CYP51A2, CYP51 | CYTOCHROME
P450 51G1 | chr1:3938501-3940754 FORWARD LENGTH=1832
Length=1832
Score = 2591 bits (1403), Expect = 0.0
Identities = 1600/1693 (95%), Gaps = 21/1693 (1%)
Strand=Plus/Plus
Query 27 CGACGATTTCTTCTCCATCGTGAGAGCAAATCTCC-GTA-TTGtcttcttcttcttcttc 84
||||||||||||||||||||||||||||||||||| | | || ||| |||||||||||
Sbjct 66 CGACGATTTCTTCTCCATCGTGAGAGCAAATCTCCAG-AGCCGTTTTC-TCTTCTTCTTC 123
Query 85 ttcCTCC-C-CG-CG-C-C-G--TCT-C-TCATCGTATCAATC-AATTGCTTCCTCCTCC 133
||||||| | || || | | | || | |||||||||||||| ||||||||||||||||
Sbjct 124 TTCCTCCTCGCGCCGTCTCTGAAACTCCATCATCGTATCAATCAAATTGCTTCCTCCTCC 183
Query 134 AAACTGAAAAACAATGGAATTGGATTCGGAGAACAAATTGTTGAAGACGGGTTTGGTTAT 193
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 184 AAATTGAAAAACAATGGAATTGGATTCGGAGAACAAATTGTTGAAGACGGGTTTGGTTAT 243
Query 194 AGTGGCTACACTTGTTATAGCCAAACTCATCTTCTCCTTCTTCACTTCTGATTCCAAGAA 253
|||||| ||||||||||||||||||||||||||||| ||||||||||||||||| |||||
Sbjct 244 AGTGGCGACACTTGTTATAGCCAAACTCATCTTCTCTTTCTTCACTTCTGATTCTAAGAA 303
Query 254 GAAGCGTCTTCCTCCTACTCTTAAAGCTTGGCCTCCTTTGATTGGAAGTCTTATCAAATT 313
|||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||
Sbjct 304 GAAGCGTCTTCCTCCTACTCTTAAAGCTTGGCCTCCATTGGTTGGAAGTCTTATCAAATT 363
Query 314 CTTGAAAGGACCTATTGTTATGCTTAGAGAGGAATACCCTAAGCTTGGAAGTGTGTTTAC 373
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 364 CTTGAAAGGACCTATTATTATGCTTAGAGAGGAATACCCTAAGCTTGGAAGTGTGTTTAC 423
Query 374 TGTTAATCTTGTTCACAAGAAGATTACTTTTCTTATTGGTCCTGAAGTCTCTGCTCATTT 433
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 424 TGTTAATCTTGTTCACAAAAAGATTACTTTTCTTATTGGTCCTGAAGTCTCTGCTCATTT 483
Query 434 TTTCAAAGCTTCTGAGTCTGATCTTAGTCAGCAGGAAGTGTATCAATTCAATGTGCCTAC 493
||||||||||||||| ||||||||||||||||||||||||||||| |||||||| |||||
Sbjct 484 TTTCAAAGCTTCTGAATCTGATCTTAGTCAGCAGGAAGTGTATCAGTTCAATGTCCCTAC 543
Query 494 TTTTGGTCCTGGAGTTGTTTTCGATGTCGATTATTCTGTTCGTCAGGAGCAGTTTCGGTT 553
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 544 TTTTGGTCCTGGAGTTGTTTTCGATGTTGATTATTCTGTTCGTCAGGAGCAGTTTCGGTT 603
Query 554 CTTCACTGAGGCACTCAGAGTCAACAAGTTGAAGGGTTATGTGGATATGATGGTTACTGA 613
||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 604 CTTCACTGAGGCACTTAGAGTTAACAAGTTGAAGGGTTATGTGGATATGATGGTTACTGA 663
Query 614 AGCTGAGGATTACTTCTCAAAATGGGGTGAGAGTGGTGAAGTTGATCTCAAGGTTGAGCT 673
|||||||||||||||||| |||||||| |||||||||||||||||| | |||||||||||
Sbjct 664 AGCTGAGGATTACTTCTCTAAATGGGGAGAGAGTGGTGAAGTTGATATTAAGGTTGAGCT 723
Query 674 AGAGCGTCTTATCATCTTGACTGCAAGTAGATGTCTACTGGGTCGAGAGGTTCGTGACCA 733
|||| | || |||||||||||||||||||||||| ||||||||||||| |||||||| ||
Sbjct 724 AGAGAGGCTCATCATCTTGACTGCAAGTAGATGTTTACTGGGTCGAGAAGTTCGTGATCA 783
Query 734 GCTTTTTGATGATGTCTCTGCTTTGTTCCATGACCTTGACAATGGGATGCTTCCCATCAG 793
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 784 GCTTTTTGATGATGTCTCTGCTTTGTTCCATGACCTTGACAATGGAATGCTTCCCATCAG 843
Query 794 TGTTCTCTTCCCATATCTCCCAATTCCAGCTCACCGCCGTCGTGACCGTGCCCGAGAAAA 853
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 844 TGTTCTCTTCCCATATCTCCCAATTCCAGCTCACCGCCGTCGTGACCGTGCCCGAGAAAA 903
Query 854 GCTTGCTGAGATTTTCTCAAAAATCATTGGGTCGAGAAAACGCTCTGGAAAATCAGAGAA 913
|||| | ||||||||| ||||||||||||||||||||||||||||||||||| |||||||
Sbjct 904 GCTTTCGGAGATTTTCGCAAAAATCATTGGGTCGAGAAAACGCTCTGGAAAAACAGAGAA 963
Query 914 CGACATGTTGCAGTGTTTCATCGTATCAAAGTACAAAGACGGTAGACAGACAACCGAGTC 973
||||||| ||||||||||||||| ||||||||||||||| ||||||||||||||||| ||
Sbjct 964 CGACATGCTGCAGTGTTTCATCGAATCAAAGTACAAAGATGGTAGACAGACAACCGAATC 1023
Query 974 TGAAGTCACCGGTTTGCTCATCGCTGCTCTGTTTGCAGGACAACACACGAGCTCTATCAC 1033
||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 1024 TGAAGTCACTGGTTTGCTCATTGCTGCTCTGTTTGCAGGACAACACACGAGCTCTATCAC 1083
Query 1034 TTCCACCTGGACCGGTGCTTATCTGATGAGATACAAAGAATACTTCTCAGCTGCTCTTGA 1093
|||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||
Sbjct 1084 TTCCACCTGGACCGGTGCTTATCTGATGCGATACAAAGAGTACTTCTCAGCTGCTCTTGA 1143
Query 1094 TGAGCAGAAGAACCTGATTGCGAAACACGGAGACAAGATCGATCATGATATCTTATCCGA 1153
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 1144 TGAGCAGAAGAACCTGATTGCGAAACATGGAGACAAGATCGATCATGATATCTTATCCGA 1203
Query 1154 GATGGATGTTCTCTACCGCTGCATAAAGGAAGCTTTGAGGCTTCACCCTCCATTGATCAT 1213
|||||||||||||||||||||||| |||||||| |||||||||||||||||| | |||||
Sbjct 1204 GATGGATGTTCTCTACCGCTGCATTAAGGAAGCGTTGAGGCTTCACCCTCCACTCATCAT 1263
Query 1214 GCTCATGAGAGCCTCACACAGTGATTTCA-CTGTGACAGCTCGGGATGGAAAAACTTATG 1272
| | ||||||||||| ||||||||||||| | |||||||||||||||||||||||||| |
Sbjct 1264 GTTAATGAGAGCCTCGCACAGTGATTTCAGC-GTGACAGCTCGGGATGGAAAAACTTACG 1322
Query 1273 ATATCCCAAAGGGTCACATCGTTGCGACCTCTCCC-GCATTTGCCAACCGCTTACCGCAC 1331
||||||||||||||||||||||||| ||||| ||| ||||||||||||||||||||||||
Sbjct 1323 ATATCCCAAAGGGTCACATCGTTGCAACCTC-CCCTGCATTTGCCAACCGCTTACCGCAC 1381
Query 1332 ATCTTCAAAGACCCAGACACCTACGACCCAGAAAGATACTCCCCCGGAAGAGAAGAGGAC 1391
|||||||||||||| |||||||||||||||||||||| |||||| |||||||||||||||
Sbjct 1382 ATCTTCAAAGACCCCGACACCTACGACCCAGAAAGATTCTCCCCTGGAAGAGAAGAGGAC 1441
Query 1392 AAAGCCGCAGGAGCATTCTCATACATTTCATTCGGAGGAGGTAGGCACGGGTGCCTTGGA 1451
||||||||||| |||||||| |||||| |||||||||| || ||||||||||||||||||
Sbjct 1442 AAAGCCGCAGGGGCATTCTCGTACATTGCATTCGGAGGGGGAAGGCACGGGTGCCTTGGA 1501
Query 1452 GAGCCGTTTGCTTACCTGCAGATCAAAGCCATATGGAGTCATTTGTTGAGGAACTTTGAG 1511
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 1502 GAGCCGTTTGCTTACCTGCAGATCAAAGCCATATGGAGTCATTTGTTGAGGAACTTCGAG 1561
Query 1512 CTTGAGTTGGTTTCACCGTTCCCTGAGATCGACTGGAACGCTATGGTGGTTGGTGTTAAA 1571
|||||| | |||||||||||||||||||| ||||||||||||||||||||||| ||||||
Sbjct 1562 CTTGAGCTAGTTTCACCGTTCCCTGAGATTGACTGGAACGCTATGGTGGTTGGAGTTAAA 1621
Query 1572 GGCAAGGTGATGGTGCGTTACAAGCGGCGCCAGCTTTCTTAAAGACATGTTTAAGGTTAT 1631
||||| |||||||||||||||||| |||||||||||||||||||||| ||||||||||||
Sbjct 1622 GGCAATGTGATGGTGCGTTACAAGAGGCGCCAGCTTTCTTAAAGACAAGTTTAAGGTTAT 1681
Query 1632 TGCAACTTTG-ATTTAT-TCTGTGGCTTCTGCTATGCTTTTGTCCCTCTCTGGTTTTAGT 1689
|||| ||||| |||| | ||| ||| ||||||| ||||||||||||||||||||||||||
Sbjct 1682 TGCAGCTTTGGATTTTTCTCTCTGGTTTCTGCTTTGCTTTTGTCCCTCTCTGGTTTTAGT 1741
Query 1690 TTTGTTGTTGAAT 1702
|||||||||||||
Sbjct 1742 TTTGTTGTTGAAT 1754
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 86194335765
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5