BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg471318
Length=1611
Score E
Sequences producing significant alignments: (Bits) Value
AT1G11770.1 | Symbols: | FAD-binding Berberine family protein ... 2460 0.0
AT1G01980.1 | Symbols: | FAD-binding Berberine family protein ... 1236 0.0
AT1G11780.1 | Symbols: | oxidoreductase, 2OG-Fe(II) oxygenase ... 713 0.0
> AT1G11770.1 | Symbols: | FAD-binding Berberine family protein
| chr1:3975679-3977379 FORWARD LENGTH=1701
Length=1701
Score = 2460 bits (1332), Expect = 0.0
Identities = 1523/1616 (94%), Gaps = 10/1616 (1%)
Strand=Plus/Plus
Query 1 ATGAAGATCTTTTGTTTAATTCTCTTCTTAATCTCCTCCTCCATCTCCACTTCTATTGCC 60
|||||||||||||||||||||||||||||||||||||||| |||||| |||||| |||||
Sbjct 1 ATGAAGATCTTTTGTTTAATTCTCTTCTTAATCTCCTCCTTCATCTCTACTTCTCTTGCC 60
Query 61 GTCGAACCTCCCCCAGAAACAATCTACCAAAACTTTCTCCAATGTTTCACAAACCAAACA 120
||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 61 GTCGAACCTCCGCCTGAAACAATCTACCAAAACTTTCTCCAATGTTTCACAAACCAAACA 120
Query 121 AAAGCTCCTCCTAACTCATTATCCGACGTCGTTTTACCAAAAACCGCGGCAGCTTTCACC 180
||||||||||||||||||||| ||||||||||||||||||||||||| || |||||||||
Sbjct 121 AAAGCTCCTCCTAACTCATTAGCCGACGTCGTTTTACCAAAAACCGCTGCCGCTTTCACC 180
Query 181 CCAGTCCTACGCGCTTACATCCGAAACGCGCGTTTCAATACCACCGCGACTCCGAAACCC 240
|| ||| |||||||||||||||| |||||||||||||| ||||| |||||||||||||||
Sbjct 181 CCCGTCTTACGCGCTTACATCCGTAACGCGCGTTTCAACACCACAGCGACTCCGAAACCC 240
Query 241 GCGATTGTAATCGCGGCTCGTTCCGAGAGCCACGTCCAAGCTGCCGTCATCTGCACGAAA 300
||||| ||||||||||| ||||||||||| ||||||||||||||||||||||||||||||
Sbjct 241 GCGATCGTAATCGCGGCGCGTTCCGAGAGTCACGTCCAAGCTGCCGTCATCTGCACGAAA 300
Query 301 TCGCTAAACATCCAACTGAAAACTCGAAGCGGTGGTCATGACTACGAAGGTGTTTCCTAT 360
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 301 TCGCTAAACATCCAACTGAAAACTCGAAGCGGTGGTCATGACTACGAAGGTGTTTCCTAC 360
Query 361 GTCTCTCACGTTCCTTTCTTCGTCCTCGACATGTCCAATCTCCGTAACATCACCGTCGAC 420
|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 361 ATCTCTCACGTTCCTTTCTTCGTCCTCGACATGTCAAATCTCCGTAACATCACCGTCGAC 420
Query 421 CCGGCCACCGAGTCTGCATGGGTCGGAGCCGGTGCAACTCTTGGTGAGGTTTATTACAGG 480
|| ||||| ||||||||||||||||| ||||||||||| || ||||| ||||| ||||||
Sbjct 421 CCCGCCACAGAGTCTGCATGGGTCGGTGCCGGTGCAACACTCGGTGAAGTTTACTACAGG 480
Query 481 ATTTGGGAAAAAACCAAAAGTCATGGATTCCCCGCCGGAGTTTGTCCCACGGTTGGAGCC 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 481 ATTTGGGAAAAAACCAAAAGTCATGGATTCCCCGCCGGAGTTTGTCCCACGGTTGGAGCC 540
Query 541 GGAGGTCACATTAGCGGTGGCGGTTACGGAAACATGATCCGAAAATACGGACTTTCCGTT 600
|||||||||||||||||||| || ||||||||||||||||||||||||||||| ||||||
Sbjct 541 GGAGGTCACATTAGCGGTGGTGGCTACGGAAACATGATCCGAAAATACGGACTCTCCGTT 600
Query 601 GATTACGTTACCGACGCCAAAATCGTTGACGTTAATGGACGGGTTCTTGATCGGAAAGGA 660
|||||||| |||||||||||||||||||| |||||||||| |||||||||||||||||||
Sbjct 601 GATTACGTCACCGACGCCAAAATCGTTGATGTTAATGGACAGGTTCTTGATCGGAAAGGA 660
Query 661 ATGGGAGAAGATTTGTTTTGGGCCATTAACGGTGGAGGTGGTGCTAGCTTCGGTGTTATC 720
||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 661 ATGGGAGAAGACATGTTTTGGGCCATTAACGGTGGAGGCGGTGCTAGCTTCGGTGTTATC 720
Query 721 CTAGCTTTCAAGATTAAACTCGTCCCTGTTCCACCGACCGTAACCGTTTTCAGAGTAGAG 780
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 721 CTAGCTTTCAAGATCAAACTCGTCCCTGTTCCACCGACCGTAACCGTTTTCAGAGTAGAG 780
Query 781 AAAAACTTGGACGAAAATGCTATTGACATGGTTCATAAATGGCAGTTTGTTGCACCCAAG 840
|||||||| | ||||||||||| ||| ||||||||||||||||| |||||||||||||||
Sbjct 781 AAAAACTTAGTCGAAAATGCTACTGAAATGGTTCATAAATGGCAATTTGTTGCACCCAAG 840
Query 841 ACCGATCCAGGTCTTTTCATGAGGCTATTGTTACAGCCGGTGACTCGGAATAAAAAACAA 900
|||||||||||||| ||||||||||||||||| |||||||||||| ||||||||| |||
Sbjct 841 ACCGATCCAGGTCTATTCATGAGGCTATTGTTGCAGCCGGTGACTAGGAATAAAATGCAA 900
Query 901 ACGGTTCGAGCATCGGTTGTGGCTCTGTTCTTGGGGAACCAAAACACTGTTATGTCTATG 960
|||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||
Sbjct 901 ACGGTTCGAGCATCGGTTGTGGCTCTCTTCTTGGGGGACCAAAACACTGTTATGTCTATG 960
Query 961 CTAACCAAAGATTTCCCAGAGCTAGGTCTAAAGAAGGAGAATTGCACGGAGATGACTTGG 1020
||||||||||| ||||| ||||| ||| | ||||||||||| ||||||||||||||||||
Sbjct 961 CTAACCAAAGAATTCCCGGAGCTTGGTTTGAAGAAGGAGAACTGCACGGAGATGACTTGG 1020
Query 1021 ATACAGTCGGTGATGTGGTGGGCGAACAACGATAACGCCACACAGATTAAACCCGAGATT 1080
||||||||||||||||||||||| |||||||||||||| || ||||||||||| ||||||
Sbjct 1021 ATACAGTCGGTGATGTGGTGGGCAAACAACGATAACGCTACGCAGATTAAACCGGAGATT 1080
Query 1081 CTACTGGATCGAAACCCGGACTCA--GC-ATCTTTCGGGAAAAGGAAGTCTGATTTCGTC 1137
|||||||| |||||||| || | | || | |||||||||||||||| |||||||||||
Sbjct 1081 CTACTGGACCGAAACCCTGA-T-ATGGCGA-CTTTCGGGAAAAGGAAATCTGATTTCGTT 1137
Query 1138 GAGAAAGAGATCACCAAAGAGGGGCTAGATTTCTTGTTCAAGAAGATGATTGAAGTTGGG 1197
|||||||||||||| ||||| || ||||||||||||||||||| |||||||||||||||
Sbjct 1138 GAGAAAGAGATCACTAAAGATGGTTTAGATTTCTTGTTCAAGAAAATGATTGAAGTTGGG 1197
Query 1198 AAGATAGGTTTAGTGTTTAATCCTTATGGAGGGATAATGAGCGA-GGTGGCTACAACGAA 1256
|||||||| ||||||||||||||||| |||||||||||||| | |||||||||||||||
Sbjct 1198 AAGATAGGGTTAGTGTTTAATCCTTACGGAGGGATAATGAG-TACGGTGGCTACAACGAA 1256
Query 1257 GACTCCATTCCCGCACAGGAAGAAGCTTTACAAAATCCAGCATTCGATGAACTGGAAAGA 1316
||| |||||||| || ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1257 GACACCATTCCCACATAGGAAGAAGCTTTACAAAATCCAGCATTCGATGAACTGGAAAGA 1316
Query 1317 TCCGGGAACCGAAGCGGAAACCAGTTTCTTGCAGAAGGCGAAAAG-TTTCTATAGCTACA 1375
||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||
Sbjct 1317 TCCGGGAACCGAAGCGGAAACCAGTTTCTTGCAGAAGGCGAAAAGCTTT-TATAGCTACA 1375
Query 1376 TGGCTCCTTTCGTGACCAAGAACCCTAGACACACTTATATCAATTACAGGGATCTGGATA 1435
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1376 TGGCTCCTTTTGTGACCAAGAACCCTAGACACACTTATATCAATTACAGGGATCTGGATA 1435
Query 1436 TTGGAGTTAATACCCCTGGCCCAAACAGTTACAGAGTAGCAGAGGTTTTCGGGAGGATGT 1495
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1436 TTGGAGTTAATACCCCTGGCCCAAACAGTTACAGAGTAGCAGAGGTTTTCGGGAGGATGT 1495
Query 1496 ATTTCGGAGAGAATTTTGATCGGTTGGTGAAAGTGAAAACTGCCGTGGATCCGCAAAACT 1555
||||||| || |||||||||||||||||||||||||||||||| |||||||||||||| |
Sbjct 1496 ATTTCGGTGAAAATTTTGATCGGTTGGTGAAAGTGAAAACTGCTGTGGATCCGCAAAATT 1555
Query 1556 TCTTCAGAGACGAACAGAGTATACCTACCTTGCCTAGCAACCCACCCAGACGTTAG 1611
||||||||||||||||||||||||||||||||||| |||| ||| | || ||||||
Sbjct 1556 TCTTCAGAGACGAACAGAGTATACCTACCTTGCCTGGCAAGCCAGCTAGGCGTTAG 1611
> AT1G01980.1 | Symbols: | FAD-binding Berberine family protein
| chr1:340172-341999 REVERSE LENGTH=1828
Length=1828
Score = 1236 bits (669), Expect = 0.0
Identities = 1258/1541 (82%), Gaps = 45/1541 (3%)
Strand=Plus/Plus
Query 89 AAAACTTTCTCCAATGTTTCA-CAAACCAAACAAAAGCTCCTCCTAACTCA-TTATCCGA 146
||| ||||||||||||||||| | || |||||| ||||||||| | | |||| |||
Sbjct 89 AAAGCTTTCTCCAATGTTTCAGC-AATCAAACAGGTGCTCCTCCTGA-GAAGTTATGCGA 146
Query 147 CGTCGTTTTACC-AAAAACCGCGGCAGCTTTCACCCCAGTCCTACGCGCTTACATCCGAA 205
||||||| | || ||| | | | |||| ||||| ||| |||||| || |||||||| |
Sbjct 147 CGTCGTTCTGCCTCAAAGCAGTGCCAGC-TTCACTCCAACCCTACGTGCCTACATCCGTA 205
Query 206 ACGCGCGTTTCAATACCACCGCGACTCCGAAACCCGC-GATTGTAATCGCGGCTCGTTCC 264
|||| |||||||| || || || | || ||| || | | | || |||||||| |||||
Sbjct 206 ACGCTCGTTTCAACACTTCCACGTCCCCCAAA-CCTCTGCTCGTTATCGCGGCGCGTTCT 264
Query 265 GAGAGCCACGTCCAAGCTGCCGTCATCTGCACGAAATCGCTAAACATCCAACTGAAAACT 324
||| |||||||||| || ||||| ||||||| ||||| || ||| |||| || || |||
Sbjct 265 GAGTGCCACGTCCAGGCCACCGTCCTCTGCACCAAATCTCTCAACTTCCAGCTCAAGACT 324
Query 325 CGAAGCGGTGGTCATGACTACGAAGGTGTTTCCTATGTCTCTCA-CGTTCCTTTCTTCGT 383
|| ||||| || ||||||||||| || |||||||| ||||| | || |||||||||||
Sbjct 325 CGCAGCGGCGGCCATGACTACGACGGCGTTTCCTACATCTCTAACCG-CCCTTTCTTCGT 383
Query 384 CCTCGACATGTCCAATCTCCGTAACATCACCGTCG--A--CCCGGCCAC--CGAG-TCTG 436
||||||||||||| ||||||||||||| ||||||| | ||| | || || | ||||
Sbjct 384 CCTCGACATGTCCTATCTCCGTAACATTACCGTCGATATGTCCGACGACGGCG-GCTCTG 442
Query 437 CATGGGTCGGAGCCGGTGCAACTCTTGGTGAGGTTTATTACAGGATTTGG--GA--A--A 490
| ||||| |||||||| || ||||| || || |||||||||| |||||| || | |
Sbjct 443 CTTGGGTTGGAGCCGGCGCTACTCTCGGCGAAGTTTATTACAACATTTGGCAGAGCAGCA 502
Query 491 AAAC-CA--AAAGTCATGGATTCCCCGCCGGAGTTTGTCCCACGGTTGGAGCCGGAGGTC 547
|||| || | ||| ||||| |||||||| ||||||||||| || || || |||||||
Sbjct 503 AAACTCACGGCACTCACGGATTTCCCGCCGGTGTTTGTCCCACAGTAGGCGCTGGAGGTC 562
Query 548 ACATTAGCGGTGGCGGTTACGGAAACATGATCCGAAAATACGGACTTTCCGTTGATTACG 607
|||||||||| || || ||||| ||||||||| ||||||||||||||||||| || ||||
Sbjct 563 ACATTAGCGGCGGGGGCTACGGCAACATGATCAGAAAATACGGACTTTCCGTGGACTACG 622
Query 608 TTACCGACGCCAAAATCGTTGACGTTAATGGACGGGTTCTTGATCGGAAA-GGAATGGGA 666
| || |||||||||||||| ||||| || |||||| |||| ||||| ||| | ||||||
Sbjct 623 TCACGGACGCCAAAATCGTAGACGTGAACGGACGGATTCTCGATCGTAAATCG-ATGGGA 681
Query 667 GAAGATTTGTTTTGGGCCATT-AACGGTGGAGGTGGTGCTAGCTTCGGTGTTATCCTAGC 725
|| |||||||||||||| ||| | || || |||||||| |||||||| || ||| || |
Sbjct 682 GAGGATTTGTTTTGGGCGATTGGA-GGCGGTGGTGGTGCGAGCTTCGGCGTGATCTTATC 740
Query 726 TTTCAAGATTAAACTCGTCCCTGTTCCACCGACCGTAACCGTTTTCAGAGTAGAGAA-AA 784
||||||||| |||||||| |||||||| |||| || || ||||||||||| ||||| |
Sbjct 741 TTTCAAGATCAAACTCGTGCCTGTTCCTCCGAGGGTGACTGTTTTCAGAGTGGAGAAGAC 800
Query 785 ACTTGGACGAAAATGCTA-TTGACATGGTTCATAAATGGCAGTTTGTTGCACCCAAGACC 843
|| | | ||||| || | |||||||||| |||||||||||||||||||| |||||||||
Sbjct 801 CCTAGTA-GAAAACGC-ACTTGACATGGTCCATAAATGGCAGTTTGTTGCTCCCAAGACC 858
Query 844 GATCCAGG-TCTTTTCATGAGGCTATTGTTACAGCCGGTGACTCGGAATAAAAAACAAAC 902
| || || ||| |||||||||||| |||| ||||| ||||| ||||| | | || ||
Sbjct 859 -AGCCCGGATCTCTTCATGAGGCTAATGTTGCAGCCAGTGACCCGGAACACGACTCAGAC 917
Query 903 GGTTCGAGCATCGGTTGTGGCTCTGTTCTTGGGGAACCAAAAC-ACTGTTATGTCTATGC 961
|||||| || ||||| || |||||||||||||| || || | | | | | |||||| |||
Sbjct 918 GGTTCGCGCGTCGGTAGTTGCTCTGTTCTTGGGAAAACAGAGCGA-TCTCATGTCTCTGC 976
Query 962 TAACCAAAGATTTCCCAGAGCTAGGTCTAAAGAAGGAGAATTGCACGGAGATGACTTGGA 1021
| ||||| || ||||| ||||| ||||| ||| ||||||||||||||||||||| ||||
Sbjct 977 TGACCAAGGAGTTCCCCGAGCTTGGTCTGAAGCCGGAGAATTGCACGGAGATGACGTGGA 1036
Query 1022 TACAGTCGGTGATGTGGTGGGCGAACAACGATAACGCCACACAGATTAAACCCGAGATTC 1081
|||||||||||||||||||||| |||||||| |||||||| ||||||||| ||||| |
Sbjct 1037 TACAGTCGGTGATGTGGTGGGCCAACAACGACAACGCCACGGTGATTAAACCGGAGATCC 1096
Query 1082 TACTGGATCGAAACCCGGACTCAGCATCTTTCGGGAAAAGGAAGTCTGATTTCGTCGAGA 1141
| ||||||||||| ||||| || || |||||| |||||| || || |||| ||| ||||
Sbjct 1097 TGCTGGATCGAAATCCGGATTCGGCGTCTTTCTTGAAAAGAAAATCGGATTACGTGGAGA 1156
Query 1142 AAGAGATCACCAAAGAGGGGCTAGATTTCTTGT-TCAAGAAGATGATTGAAGTTGGGAAG 1200
||||||||| |||||| || |||||||||||| | |||||| |||| || | |||||||
Sbjct 1157 AAGAGATCAGCAAAGACGGTTTAGATTTCTTGTGT-AAGAAGTTGATGGAGGCTGGGAAG 1215
Query 1201 ATAGGTTTAGTGTTTAATCCTTATGGAGGGATAATGAGCGAGGTGGCTACAACGAAGACT 1260
|||| ||||||| ||||| || ||||||| ||||||||| || ||||| ||| ||||
Sbjct 1216 CTAGGGCTAGTGTTCAATCCATACGGAGGGAAAATGAGCGAAGTTGCTACGACGGCGACT 1275
Query 1261 CCATTCCCGCACAGGAAGAAGCTTTACAAAATCCAGCATTCGATGAACTGGAAAGATCCG 1320
|| ||||| |||||||||| ||||| ||| ||||||||||||||||||||||||| |||
Sbjct 1276 CCGTTCCCACACAGGAAGAGGCTTTTCAAGGTCCAGCATTCGATGAACTGGAAAGACCCG 1335
Query 1321 GGAACCGAAGCGGAAACCAGTTTCTTGCAGAAGGCGAAAAGTTTCTATAGCTACATGGCT 1380
|| || || | |||| ||||||| || | ||| ||| ||| ||||| ||||||||||||
Sbjct 1336 GGCACTGATGTTGAAAGCAGTTTCATGGAAAAGACGAGAAGCTTCTACAGCTACATGGCT 1395
Query 1381 CCTTTCGTGACCAAGAACCCTAGACACACTTATATCAATTACAGGGATCTGGATAT-TGG 1439
||||||||||||||||| || |||||||| ||| |||| ||||||||||| ||||| ||
Sbjct 1396 CCTTTCGTGACCAAGAATCCAAGACACACGTATCTCAACTACAGGGATCTTGATATCGGG 1455
Query 1440 AGTTAATACCCCTGGCCCAAACAGTTACAGAGTAGCAGAGGTTTTCGGGAGGATGTATTT 1499
| | || | || |||||||||||||||||||| ||| ||||||| |||||| | ||||||
Sbjct 1456 A-TCAACAGCCATGGCCCAAACAGTTACAGAGAAGCTGAGGTTTACGGGAGAAAGTATTT 1514
Query 1500 CGGAGAGAATTTTGATCGGTTGGTGAAAGTGAAAACTGCCGTGGATCC-GCAAAACTTCT 1558
|||||||||||||||||||||||| ||||| ||||| ||||||||||| | ||||||| |
Sbjct 1515 CGGAGAGAATTTTGATCGGTTGGTCAAAGTCAAAACAGCCGTGGATCCAG-AAAACTTTT 1573
Query 1559 TCAGAGACGAACAGAGTATACCTACCTTGCCTAGCAACCCA 1599
||||||| ||||| ||||||||||||||||||| ||| |||
Sbjct 1574 TCAGAGATGAACAAAGTATACCTACCTTGCCTACCAAGCCA 1614
> AT1G11780.1 | Symbols: | oxidoreductase, 2OG-Fe(II) oxygenase
family protein | chr1:3976839-3979195 REVERSE LENGTH=1831
Length=1831
Score = 713 bits (386), Expect = 0.0
Identities = 430/451 (95%), Gaps = 4/451 (1%)
Strand=Plus/Minus
Query 1163 TAGATTTCTTGTTCAAGAAGATGATTGAAGTTGGGAAGATAGGTTTAGTGTTTAATCCTT 1222
||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||
Sbjct 1829 TAGATTTCTTGTTCAAGAAAATGATTGAAGTTGGGAAGATAGGGTTAGTGTTTAATCCTT 1770
Query 1223 ATGGAGGGATAATGAGCGA-GGTGGCTACAACGAAGACTCCATTCCCGCACAGGAAGAAG 1281
| |||||||||||||| | |||||||||||||||||| |||||||| || |||||||||
Sbjct 1769 ACGGAGGGATAATGAG-TACGGTGGCTACAACGAAGACACCATTCCCACATAGGAAGAAG 1711
Query 1282 CTTTACAAAATCCAGCATTCGATGAACTGGAAAGATCCGGGAACCGAAGCGGAAACCAGT 1341
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1710 CTTTACAAAATCCAGCATTCGATGAACTGGAAAGATCCGGGAACCGAAGCGGAAACCAGT 1651
Query 1342 TTCTTGCAGAAGGCGAAAAG-TTTCTATAGCTACATGGCTCCTTTCGTGACCAAGAACCC 1400
|||||||||||||||||||| ||| |||||||||||||||||||| ||||||||||||||
Sbjct 1650 TTCTTGCAGAAGGCGAAAAGCTTT-TATAGCTACATGGCTCCTTTTGTGACCAAGAACCC 1592
Query 1401 TAGACACACTTATATCAATTACAGGGATCTGGATATTGGAGTTAATACCCCTGGCCCAAA 1460
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1591 TAGACACACTTATATCAATTACAGGGATCTGGATATTGGAGTTAATACCCCTGGCCCAAA 1532
Query 1461 CAGTTACAGAGTAGCAGAGGTTTTCGGGAGGATGTATTTCGGAGAGAATTTTGATCGGTT 1520
|||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||
Sbjct 1531 CAGTTACAGAGTAGCAGAGGTTTTCGGGAGGATGTATTTCGGTGAAAATTTTGATCGGTT 1472
Query 1521 GGTGAAAGTGAAAACTGCCGTGGATCCGCAAAACTTCTTCAGAGACGAACAGAGTATACC 1580
|||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||
Sbjct 1471 GGTGAAAGTGAAAACTGCTGTGGATCCGCAAAATTTCTTCAGAGACGAACAGAGTATACC 1412
Query 1581 TACCTTGCCTAGCAACCCACCCAGACGTTAG 1611
|||||||||| |||| ||| | || ||||||
Sbjct 1411 TACCTTGCCTGGCAAGCCAGCTAGGCGTTAG 1381
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 79567863825
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5