BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg471361 Length=1942 Score E Sequences producing significant alignments: (Bits) Value AT1G12120.1 | Symbols: | Plant protein of unknown function (DU... 2196 0.0 > AT1G12120.1 | Symbols: | Plant protein of unknown function (DUF863) | chr1:4114771-4117594 REVERSE LENGTH=1955 Length=1955 Score = 2196 bits (1189), Expect = 0.0 Identities = 1376/1468 (94%), Gaps = 6/1468 (0%) Strand=Plus/Plus Query 478 CTCACCTAAGCTGCTGGCGAAAGATATCGATCTTCGGCTTCCTGCAGATCACTACGCTTA 537 |||||||||||| ||| |||||||||||||||| ||||||||||||||||||||||||| Sbjct 479 CTCACCTAAGCTTCTGAAGAAAGATATCGATCTTAGGCTTCCTGCAGATCACTACGCTTA 538 Query 538 TACTAACTTTCATGAGACACTTGGTTCTGGGAAATTTTACGGCACTGGTGGTTACCGAGA 597 ||||||||||||||||||||||||||||| |||||||||| ||| |||| ||| |||||| Sbjct 539 TACTAACTTTCATGAGACACTTGGTTCTGAGAAATTTTACAGCAATGGTAGTTCCCGAGA 598 Query 598 TACCGTAGAGATGAGATTTCATTCGGGGCACGATGCTAATAATGTGAAGGAAGCATCAGC 657 |||||||||||||||||||||| |||||||||| ||||||||||||||||||| |||||| Sbjct 599 TACCGTAGAGATGAGATTTCATCCGGGGCACGAAGCTAATAATGTGAAGGAAGTATCAGC 658 Query 658 CACAAATTGGAGTGGCAAGAGAAATCCAAGAATTGTTATTGATCTTGAAGAACCTCCTCC 717 ||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 659 CACAAGTTGGACTGGCAAGAGAAATCCAAGAATTGTTATTGATCTTGAAGAACCTCCTCC 718 Query 718 CAC-TGGGGTCTCCCATAGAGAGACTACAGAGCATGCTGC-GGCTTCTGTTAGCTATGTT 775 ||| | |||||||||||||||||||||||||||||||| | ||||||||||||||||||| Sbjct 719 CACAT-GGGTCTCCCATAGAGAGACTACAGAGCATGCT-CAGGCTTCTGTTAGCTATGTT 776 Query 776 ACTGTGAGAAATCCTGAAACAAAACCGTCATTCTTTGATCGGATCAGCTCAAACATTCTG 835 ||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||| Sbjct 777 ACTGTGAGAAATCCTGACACAAAACCGTCGTTCTTTGATCGGATCAGCTCAAACATTCTG 836 Query 836 AAGG-TGGTGGATCAATCTCTCGTTGAGTATGATAGTGATAAAACGACTAGCAAGGAGCC 894 | || | || || ||||| ||||||||| ||||||||||||| || ||||| |||||| | Sbjct 837 ATGGAT-GTAGACCAATCACTCGTTGAGGATGATAGTGATAAGACAACTAGTAAGGAGTC 895 Query 895 AAGTTTACTGGATCTTAATAGTACCCCGGTTGATGAGTCTGTTTCCGAACCTCATTATTG 954 ||||||||||||||||||||| || ||||||||||||||||||||||| |||| ||| | Sbjct 896 AAGTTTACTGGATCTTAATAGCACACCGGTTGATGAGTCTGTTTCCGAGCCTCGTTACTC 955 Query 955 TTTTTTACAAGATCTGAACTGTCCATACATCGAGGAGGAGACAGAAACGAGCTGTGAGAA 1014 | | |||||||||||||||||| |||||||||||||||||||||||||||||| ||||| Sbjct 956 TCTCTTACAAGATCTGAACTGTGCATACATCGAGGAGGAGACAGAAACGAGCTACGAGAA 1015 Query 1015 GAGTGGAATAGATGATGGTCCTACACCGCTTTGCTCTCCTCAATGCCAAAATGTTCATGA 1074 ||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||| Sbjct 1016 GAGTGGAATAGATGATGGTTCTACACCGCTTTGCTCTCCTCAATGCCAAAATGTCCATGA 1075 Query 1075 AAAAGACGGCACAGCATCTCCAGCTTCGTATACTTCTTGCTGCACCACTGAAAACAACTC 1134 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 1076 AAAAGACGGCACAGCATCTCCAGCTTCGGATACTTCTTGCTGCACCACTGAAAACAACTC 1135 Query 1135 GAGGACAGAGTCAAGAAGAAGTTCTTCTCCTCGAGCACTGGAGCCTTCTTGCCGTACCCG 1194 ||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct 1136 GAGGATTGAGTCAAGAAGAAGTTCTTCTCCTCGAGCACTGCAGCCTTCTTGCCGTACCCG 1195 Query 1195 GCTTGAGTTTACCAACACAGAAGACTTACTGGAGGAGAATGGATGTTGTAACGAGGAGGA 1254 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1196 GCTTGAGTTTACCAACACAGAAGACTTACTGGAGGAGAATGGATGTTGTAACGAGGAGGA 1255 Query 1255 AGATTCGTCTGAAGTGATTCAAATGGCAGCTGAATCATTAGTCCACATATCGGAGATTTC 1314 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||| || Sbjct 1256 TGATTCGTCTGAAGTGATTCAAATGGCAGCTGAGTCATTAGTCCACATATCGGAGATATC 1315 Query 1315 ATATCAAAATCAAGACTTGCAATCAAAGCTTGTGTCAAAAATCAACAGCTCATCTCAAGA 1374 |||||||| ||||||||||||||||||||||||| || || ||||||||||||| |||| Sbjct 1316 GTATCAAAACCAAGACTTGCAATCAAAGCTTGTGTTAAGAACCAACAGCTCATCTGAAGA 1375 Query 1375 TCAAGACTTTCCAGATAAACCCGAGATGGGTAAAGCGGAACCGGGATGTTCCTGCGATTC 1434 |||||| |||||||||||||| ||||||||||||||| ||||||||||||||| |||||| Sbjct 1376 TCAAGATTTTCCAGATAAACCGGAGATGGGTAAAGCGAAACCGGGATGTTCCTACGATTC 1435 Query 1435 ATATGAGCGACACACATTAGGAATAAGAGAAACTAACACTGAAGAAGACTTTTGTGTGTC 1494 ||||||||||||||| ||||||||||| ||||| ||||||||||||||||| |||||||| Sbjct 1436 ATATGAGCGACACACGTTAGGAATAAGCGAAACCAACACTGAAGAAGACTTCTGTGTGTC 1495 Query 1495 ATCAATGGCTCGAGATGAGCTGAATAACATCACAAGAGATAACAACAAAGAGATTGGACT 1554 ||||||||||| |||||| || |||||||||||||||||||| ||||||||||||||||| Sbjct 1496 ATCAATGGCTCTAGATGAACTTAATAACATCACAAGAGATAATAACAAAGAGATTGGACT 1555 Query 1555 CAAGCTGAGAAGAGGGAGAAGAATGAAGAACTTCCAAAAAGAGATACTCCCGAGCTTAAC 1614 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1556 CAAGCTGAGAAGAGGGAGAAGAATGAAGAACTTCCAAAAAGAGATACTCCCGAGCTTAAC 1615 Query 1615 GTCGCTCTCTAGACACGAGATCCGAGAAGACATTAACATCTTGGAAGCAGTTTTGAGATC 1674 |||||| |||||||| |||||||| |||||||| |||||||||||||||||||||||||| Sbjct 1616 GTCGCTTTCTAGACATGAGATCCGGGAAGACATGAACATCTTGGAAGCAGTTTTGAGATC 1675 Query 1675 AAGAGAGTACAAGAAGTTGCAGGGAAAGACGAAAGATGTCAAATTCAGAGCAAACCCAAG 1734 |||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||| Sbjct 1676 AAGAGAGTACAAGAAGATGCAGGGAAAGACGAAAGATGTCAAATTCAAAGCAAACCCAAG 1735 Query 1735 AAACAAACGTTCAGCGCCGCAGAGGTGCGTTGGTAAAAGAAAGCGAAAATCCGAGTGATA 1794 ||||||||||||| | || || || |||||||||||||||| ||||||| |||| ||||| Sbjct 1736 AAACAAACGTTCACCACCACAAAGATGCGTTGGTAAAAGAAGGCGAAAAACCGAATGATA 1795 Query 1795 TCGATACCTTCCCGGATTCAGATTCTTTCATACAATTGCTTCATCATGTAATCTTATAAC 1854 |||||||||| |||| ||| |||||||||||||| |||||||||||||||||||| |||| Sbjct 1796 TCGATACCTTGCCGGTTTCTGATTCTTTCATACATTTGCTTCATCATGTAATCTTGTAAC 1855 Query 1855 AGTCTTTGTTTTCGATTTATTTGTTTTAACCTATGACATTGATTATGATAAGAGGAAAGG 1914 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 1856 AGTCTTTGTTTTCGATTTATTTGTTTTAACTTATGACATTGATTATGATAAGAGGAAAGG 1915 Query 1915 CTAGTGAGACGATGACATTCATTTTCTC 1942 ||||||||||||| | | |||||||||| Sbjct 1916 CTAGTGAGACGATTATAATCATTTTCTC 1943 Score = 592 bits (320), Expect = 6e-168 Identities = 422/466 (91%), Gaps = 28/466 (6%) Strand=Plus/Plus Query 1 TTTCTGAGATTTGAGAGAGtctcctctctctctctctcGCTCTATCGCTCCTCATGATCC 60 ||||||||||||||||||||||||||||||| |||||| || |||||||||||||||||| Sbjct 25 TTTCTGAGATTTGAGAGAGTCTCCTCTCTCT-TCTCTCTCTATATCGCTCCTCATGATCC 83 Query 61 GA--TTTT-TAT-ATTTATAAAAAATTTATGTGATAATTACAGATACACGTTATTTGTGT 116 || |||| ||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 84 GATTTTTTATATAATTTATAAAAAATTTATGTGATAATTACAGATACACGTTATTTGTGT 143 Query 117 GTATATTGATGGAGACAATAACCATTGGAATCTGACCATGGATCTCTTTTCTTCTTGAGA 176 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 144 GTATATTGATAGAGACAATAACCATTGGAATCTGACCATGGATCTCTTTTCTTCTTGAGA 203 Query 177 TAttttt--ttt-t--CTCCTGTTCTCGTCTCCCCCAGATCTGTTC--C--TC---C-AT 223 ||||||| ||| | |||||||||||||||||| |||||||||| | || | || Sbjct 204 TATTTTTCATTTCTTTCTCCTGTTCTCGTCTCCC--AGATCTGTTCGTCAATCTTACCAT 261 Query 224 TGGAAAGCTTCAAGCTT--TTTTATTCTCTCTCTATAGGGACGGGACCATTGTATAAAAG 281 ||||||||||||||||| |||| |||||| ||| ||||||||||| ||||||||||| Sbjct 262 TGGAAAGCTTCAAGCTTCCTTTTTTTCTCTATCTG--GGGACGGGACCGTTGTATAAAAG 319 Query 282 AGTTAGTTAGACCAGACGGCCGCACGATGTATTTCTTCGGTTTGTCCAAAGAAGAAGTGT 341 |||||| | ||||||| | |||| |||||||||||||||||||||||||||||||||| Sbjct 320 AGTTAG--A--CCAGACGACGGCACAATGTATTTCTTCGGTTTGTCCAAAGAAGAAGTGT 375 Query 342 TGTCACAGAAACATGTTGTATCATATAAAGAGACGTCTAAGCAGAATCCATTCAATATGG 401 |||||||||||||||||||||||||||||||||| ||||||||||| ||| ||||||||| Sbjct 376 TGTCACAGAAACATGTTGTATCATATAAAGAGACTTCTAAGCAGAACCCAATCAATATGG 435 Query 402 TCACTCTGTTTGGGAGACAGGTGTATCAGGTGAAAAGCGAGAGCTC 447 ||||||||||||| ||||||||||||||||| ||||| |||||||| Sbjct 436 TCACTCTGTTTGGCAGACAGGTGTATCAGGTAAAAAGTGAGAGCTC 481 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 96184244220 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5