BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg471422 Length=1013 Score E Sequences producing significant alignments: (Bits) Value AT1G12710.1 | Symbols: AtPP2-A12, PP2-A12 | phloem protein 2-A1... 1530 0.0 > AT1G12710.1 | Symbols: AtPP2-A12, PP2-A12 | phloem protein 2-A12 | chr1:4326739-4328481 REVERSE LENGTH=1274 Length=1274 Score = 1530 bits (828), Expect = 0.0 Identities = 899/934 (96%), Gaps = 1/934 (0%) Strand=Plus/Plus Query 60 TTAAGGTTTAGATGGGTGTGGCTCACTCTGATCTTCACAATGATTTGTCTTCTTCATCTT 119 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 147 TTAAGGTTTAGATGGGTGTGGCTCACTCTGATCTTCACAATGATTTGTCTTCTTCATCTT 206 Query 120 GTTTTGGGGATCGGAATCTGTTGAAGCTTGGGTTAGGGGATTTACCAGAGGCGTGTGTGG 179 ||||||||||||||||| | ||||||| ||| ||||| |||||||||||||||||||||| Sbjct 207 GTTTTGGGGATCGGAATATCTTGAAGCCTGGTTTAGGAGATTTACCAGAGGCGTGTGTGG 266 Query 180 CTATGATTGTTGAGAATTTGGATCCTGTTGAGATCTGTAGATTCTCAAAGCTCAATAGAG 239 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 267 CTATAATTGTTGAGAATTTGGATCCTGTTGAGATCTGTAGATTCTCAAAGCTCAATAGAG 326 Query 240 CATTTCGCGGCGCTTCTTGGGCTGATTGTGTGTGGGAATCGAAGCTTCCTCCGAATTACA 299 ||||||||||||||||||||||||||||||| ||||||||||| ||||||| |||||||| Sbjct 327 CATTTCGCGGCGCTTCTTGGGCTGATTGTGTTTGGGAATCGAAACTTCCTCAGAATTACA 386 Query 300 GAGTTGTTCTCGAGAAAATCCTTGGTGGGTTCCCTGAAAATTTGCAAAAAAGAGACCTTT 359 ||| |||||||||||||||||||||||| |||||||||||||||||||||||| |||||| Sbjct 387 GAGATGTTCTCGAGAAAATCCTTGGTGGCTTCCCTGAAAATTTGCAAAAAAGACACCTTT 446 Query 360 ATGCTTGTCTCTGCAGGATTAACTCATTCGATGATGGCACCAAGAAGGTATGGATTGATA 419 |||||| ||||| ||||||||||||||||||||||| |||||||||||||||||| |||| Sbjct 447 ATGCTTTTCTCTCCAGGATTAACTCATTCGATGATGCCACCAAGAAGGTATGGATAGATA 506 Query 420 AACGAAGCAGTGGTGTTTGTCTATCCATTTCAGCTAAAGGATTATCCATCACAGGCATTG 479 |||||| ||||||||||||||||||||||||||| |||||||||||||| |||||||||| Sbjct 507 AACGAACCAGTGGTGTTTGTCTATCCATTTCAGCCAAAGGATTATCCATTACAGGCATTG 566 Query 480 ATGATCGTAGATATTGGAGTCATATCCCCACTGATGAATCTCGGTTTTCTTCTGTAGCTT 539 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 567 ATGATCGTAGATATTGGAGTCATATCCCCACTGATGAATCTCGGTTTTCTTCTGTAGCTT 626 Query 540 ATCTCCAACAAATTTGGTGGTTTGAAGTTGATGGTGAAATCGATTTCCCATTTCCGGTTG 599 ||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||| Sbjct 627 ATCTCCAACAAATCTGGTGGTTTGAAGTTGATGGTGAAATCGATTTCCCATTCCCGGTTG 686 Query 600 GAACCTACAGCATTTTCTTCAGGCTTCAATTAGGCCGGCCTGGCAAGTGGTTTGGTCGAC 659 |||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||| Sbjct 687 GAACCTACAGCATTTTCTTCAGGCTTCAATTAGGCCGGTCGGGCAAGTGGTTTGGTCGAC 746 Query 660 GGGTCTGTAACACCGAACAAGTCCATGGTTGGGACATTAAACCGGTTCGATTTCAACTCT 719 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 747 GGGTCTGTAACACAGAACAAGTCCATGGTTGGGACATTAAACCGGTTCGATTTCAACTCT 806 Query 720 GGACTGAAGATGGTCAATATTCCTCATCTCAATGTATGTTAACTGAGCGGGGAAACTGGA 779 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 807 GGACTGAAGATGGTCAATATTCCTCATCTCAATGTATGTTAACTGAGCGGGGAAACTGGA 866 Query 780 TTCATTACCACGCGGGAGACTTTATTGTCCGGGAATCGAATAGGTCATCGACAAAGATAA 839 ||||||||||||| |||||| || |||||||||||||||||||||||||||||||||| | Sbjct 867 TTCATTACCACGCCGGAGACGTTGTTGTCCGGGAATCGAATAGGTCATCGACAAAGATTA 926 Query 840 AATTTTCGATGACTCAGATCGACTGTACCCATACCAAAGGCGGGTTATCTCTAGACTCTG 899 | |||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||| Sbjct 927 AGTTTTCGATGACTCAGATCGATTGTACACATACCAAAGGCGGGTTATCTCTAGACTCTG 986 Query 900 TAGTCGTGTACCCGAGCTCGTGTAAAGGCCAGTTGAAGCGGTTTTAATGTTTCAATCGGA 959 ||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||| Sbjct 987 TAGTCGTGTACCCGAGCTCGTGTAAAGACCAGTTGAAGCGGTTTTAATGTTTCAACCGGA 1046 Query 960 TCCGGTTTAGTGAGAGGTTAAAGGAGG-TTTTTT 992 ||||||||||||||||||||||| ||| |||||| Sbjct 1047 TCCGGTTTAGTGAGAGGTTAAAGCAGGGTTTTTT 1080 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 49631337236 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5