BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg471461
Length=1597
Score E
Sequences producing significant alignments: (Bits) Value
AT1G13080.1 | Symbols: CYP71B2 | cytochrome P450, family 71, su... 2351 0.0
AT1G13070.1 | Symbols: CYP71B27 | putative cytochrome P450 | ch... 863 0.0
> AT1G13080.1 | Symbols: CYP71B2 | cytochrome P450, family 71,
subfamily B, polypeptide 2 | chr1:4459187-4460940 FORWARD LENGTH=1667
Length=1667
Score = 2351 bits (1273), Expect = 0.0
Identities = 1496/1602 (93%), Gaps = 21/1602 (1%)
Strand=Plus/Plus
Query 1 AAAAATGACGATCTTGCTCTGTTTCTTTTTAGTTTCACTTCTTACTCTCGTATCATCAAT 60
||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||
Sbjct 22 AAAAATGACGATCTTGCTCTGTTTCTTCTTAGTTTCACTTCTTACTATCGTATCATCAAT 81
Query 61 CTTTCTTAAACAGATTAAAAACC-CTAAATTCAATCTGCCTCCGAGCCCTTTAAGTCTTC 119
|||||||||||||| | |||||| | ||||||||||| || || ||||||| ||| ||||
Sbjct 82 CTTTCTTAAACAGAAT-AAAACCTCAAAATTCAATCTTCCCCCAAGCCCTTCAAGCCTTC 140
Query 120 CGATCATCGGAAACTTACACCATCTCGCAGGATTGCCTCACAGATGTTTTCATAAGCTCT 179
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 141 CGATCATTGGAAACTTACACCATCTCGCAGGATTGCCTCACAGATGTTTTCATAAGCTCT 200
Query 180 CGATCAAATACGGACCCTTGGTCTTTCTTCGACTCGGGTTTGTTCCAGTTGTTGTGGTCT 239
| ||||||||||||||||||||||||||||| ||||||| |||||| ||||||||| |||
Sbjct 201 CTATCAAATACGGACCCTTGGTCTTTCTTCGTCTCGGGTCTGTTCCGGTTGTTGTGATCT 260
Query 240 CATCGAGCGAAGCAGCTGAAGCAGTTCTCAGAACCCATGATTTGGAATGTTGCAGCCGAC 299
||||||| |||||||||||||||||||||| |||| |||| |||||||||||||||||||
Sbjct 261 CATCGAGTGAAGCAGCTGAAGCAGTTCTCAAAACCAATGACTTGGAATGTTGCAGCCGAC 320
Query 300 CAAAGACGGTGGGGACCGGAAAACTCTCTTACGGTTTCAAAGACATCAGTTTCGCACCAT 359
||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||
Sbjct 321 CAAAGACGGTGGGGAGCGGAAAACTCTCTTACGGTTTCAAAGACATCACTTTCGCACCAT 380
Query 360 ACGGTGAGTATTGGCGAGAAGTGCGAAAACTCGCGGTTATCGAGCTTTTTAGCTCTAAAA 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 381 ACGGTGAGTATTGGCGAGAAGTGCGAAAACTCGCGGTTATCGAGCTTTTTAGCTCTAAAA 440
Query 420 AGGTTCAATCTTTTAGGTATATAAGAGAGGAAGAGGTCGACTTTATGGTCAAGAAAGTGT 479
||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 441 AGGTTCAATCTTTCAGGTATATAAGAGAGGAAGAGGTCGACTTCGTGGTCAAGAAAGTGT 500
Query 480 CGGAATCAGCTTTGAAGCAAGCTCCTGTGGATCTAAGCAAAACCTTTTTCTCCCTCACCG 539
| |||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||
Sbjct 501 CAGAATCAGCTTTGAAGCAATCTCCTGTGGATTTAAGCAAAACCTTTTTCTCCCTCACCG 560
Query 540 CAAGCATCATTTGTAGAGTAGCTTTGGGACAGAATTTCCATGAAAGCGGCTTTGTTATCG 599
| || |||||||||||||| || || |||||||||||| |||||||||||||||||||||
Sbjct 561 CTAGTATCATTTGTAGAGTCGCCTTAGGACAGAATTTCAATGAAAGCGGCTTTGTTATCG 620
Query 600 ATCAAGATAGGATCGAAGAACTTGTTACCGAATCAGCGGAAGCTCTAGGGACTTTCACTT 659
||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 621 ATCAAGACAGGATCGAAGAACTTGTTACCGAATCAGCAGAAGCTCTAGGGACTTTCACTT 680
Query 660 TCTCTGACTTCTTCCCTGGTGGACTTGGAAGATTCCTAGATTGGTTGTTTCAACGACACA 719
|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 681 TCTCTGACTTCTTCCCTGGTGGACTTGGAAGATTTGTAGATTGGTTGTTTCAACGACACA 740
Query 720 AGA-GTATTAACAAAGTCTTCAAGGAACTTGATGCTTTTTATCAGCATGTGATTGATGAT 778
||| | || ||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 741 AGAAG-ATCAACAAAGTCTTTAAGGAACTTGATGCTTTTTATCAGCATGTGATTGATGAT 799
Query 779 CACTTGAAGCCAGACGGAAGGAAA-AATCAAGATATTGTCACCTTGATTTTGGATATGAT 837
|||||||||||||| ||||| ||| |||||||||||||||||||||||||||||||||||
Sbjct 800 CACTTGAAGCCAGAGGGAAG-AAAGAATCAAGATATTGTCACCTTGATTTTGGATATGAT 858
Query 838 CGATAAACAAGAA-ATTTCAGATGCTTTCAAACTCAACATGGATAATCTCAAGGCAATTG 896
||||||||||||| ||| ||||| ||||||||||||||||||||||||||||||||||||
Sbjct 859 CGATAAACAAGAAGATT-CAGATTCTTTCAAACTCAACATGGATAATCTCAAGGCAATTG 917
Query 897 TCATGGATGTATTTCTCGCGGGGATAGATACGAGCGCGGTAACTATGATTTGGGCGATGA 956
||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||
Sbjct 918 TCATGGATGTATTTCTCGCGGGGATAGATACAAGCGCGGTAACAATGATTTGGGCGATGA 977
Query 957 CAGAACTTATTAGAAACCCTAGAGTGATGAAGAAAGCTCAAGAAAATATTCGAACCACCC 1016
|||||||||||||||||||||||||||||||||| |||||||||| |||||||||||| |
Sbjct 978 CAGAACTTATTAGAAACCCTAGAGTGATGAAGAAGGCTCAAGAAAGTATTCGAACCACTC 1037
Query 1017 TCGGTCTCAA-AAGGGAAAGAATCACCGAAGAAGATCTAGGCAAAGTTGAGTACTTGAAC 1075
| |||||||| |||| |||||||||| ||||||||| |||||||||||||||| ||||||
Sbjct 1038 TGGGTCTCAAGAAGG-AAAGAATCACTGAAGAAGATTTAGGCAAAGTTGAGTATTTGAAC 1096
Query 1076 CACATAATCAAGGAAACATTCAGGTTACACCCAGCACTTCCATTTGTGGTTCCAAGGGAA 1135
|||||| |||||||||| || ||||||||||| ||||||||||||||||| |||||||||
Sbjct 1097 CACATACTCAAGGAAACTTTTAGGTTACACCCGGCACTTCCATTTGTGGTGCCAAGGGAA 1156
Query 1136 ACAATGTCTCACATCAAGATCCAAGGCTACGACATTCCCCCGAAAACGCAAATCCAGCTT 1195
||||||||||||||||||||||||||||| || ||||| |||||||| ||||||||||||
Sbjct 1157 ACAATGTCTCACATCAAGATCCAAGGCTATGATATTCCACCGAAAACACAAATCCAGCTT 1216
Query 1196 AACGTGTGGACGATTGGACGTGACCCTAAGCGTTGGACCGACCCTGAAGAATTCATCCCT 1255
|||||||||||||| |||||||||||||||||||||| |||||||||||||||| ||||
Sbjct 1217 AACGTGTGGACGATCGGACGTGACCCTAAGCGTTGGAATGACCCTGAAGAATTCAACCCT 1276
Query 1256 GAGAGATTTGCAAATAGTTCTGTAGATTTTAGAGGACAACACTTTGACCTATTACCGTTT 1315
|| || ||||||||||| ||||||||||||||||||||||| ||||||||||||||||||
Sbjct 1277 GAAAGGTTTGCAAATAGCTCTGTAGATTTTAGAGGACAACATTTTGACCTATTACCGTTT 1336
Query 1316 GGTTCTGGTCGAAGGATTTGTCCCGGGATGCCAATGGCGATTGCTACCGTGGAACTCGCA 1375
|||||||||||||||||||||||||| ||||||||||||||||||| |||||||| |||
Sbjct 1337 GGTTCTGGTCGAAGGATTTGTCCCGGAATGCCAATGGCGATTGCTAGTGTGGAACTAGCA 1396
Query 1376 TTGATGAATTTGCTTTATTATTTCGATTGGAGTATGCCTGATGGGA-TGAAAGGTGAAAA 1434
||||||||||||||||||||||| |||||||||||||||||||||| | ||||||||| |
Sbjct 1397 TTGATGAATTTGCTTTATTATTTTGATTGGAGTATGCCTGATGGGACT-AAAGGTGAAGA 1455
Query 1435 CATTGATATGGAAGAAGCTGGTAATATCTCCATTGTCAAGAAAATACCTCTTCGACTTGT 1494
|||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||
Sbjct 1456 CATTGATATGGAAGAAGCTGGTAATATCTCTATTGTCAAGAAAATACCTCTTCAACTTGT 1515
Query 1495 GCCCGGTCAACATTATTAATCGAGCAGTAATAGAAGCTCGATAACATGGAAAATGAATGA 1554
||| | ||||| ||||| || ||||| ||||| ||||||||||||||||||| || ||||
Sbjct 1516 GCCTGTTCAACGTTATTGAT-GAGCAATAATATAAGCTCGATAACATGGAAAGTGTATGA 1574
Query 1555 AGCAAAACTGCAAAAGACGTAACATTCTTTAGATTTTGTTGT 1596
||||||| || | ||| |||||||||||||||||||
Sbjct 1575 AGCAAAA----AACA----TAAGATTCTTTAGATTTTGTTGT 1608
> AT1G13070.1 | Symbols: CYP71B27 | putative cytochrome P450 |
chr1:4455477-4457099 FORWARD LENGTH=1623
Length=1623
Score = 863 bits (467), Expect = 0.0
Identities = 772/915 (84%), Gaps = 38/915 (4%)
Strand=Plus/Plus
Query 5 ATGACGATCTTGCTCTGTTTCTTTTTAGTTTCACTTCTTACTCTCGTATCATCAATCTTT 64
||| |||||||| |||||||||| || ||||| ||| |||||||||||||||||||||||
Sbjct 1 ATGGCGATCTTGTTCTGTTTCTTCTTGGTTTCGCTTGTTACTCTCGTATCATCAATCTTT 60
Query 65 CTTAAACAGATTAAAAACCCTAAATTCAATCTGCCTCCGAGCCCT-TTAAGTCTTCCGAT 123
|||||||||| |||||| | ||||| ||||| |||||||||||| | |||||||||||
Sbjct 61 TTTAAACAGATCAAAAACACAAAATTTAATCTTCCTCCGAGCCCTCCT-AGTCTTCCGAT 119
Query 124 CATCGGAAACTTACACCATCTCGCAGGATTGCCTCACAGATGTTTTCATAAGCTCTCGAT 183
|| ||||||||||||||||| ||||||||||||||||||||| |||||||||||| ||
Sbjct 120 AATTGGAAACTTACACCATCTTACAGGATTGCCTCACAGATGTTATCATAAGCTCTCCAT 179
Query 184 CAAATACGGACCCTTGGT-CTTTCTTCGA-CTCGGGTTTGTTCCAGTTGTTGTGGTCTCA 241
||||||||| ||| || | | |||||| | ||||| |||||||||||||||||| |||||
Sbjct 180 CAAATACGGTCCCGTGATAC-TTCTTC-ATCTCGGCTTTGTTCCAGTTGTTGTGATCTCA 237
Query 242 TCGAGCGAAGCAGCTGAAGCAGTTCTCAGAACCCATGATTTGGAATGTTGCAGCCGACCA 301
| ||||||||||||||||||||| |||| ||| |||||||||||||||||||||||||||
Sbjct 238 TTGAGCGAAGCAGCTGAAGCAGTACTCAAAACACATGATTTGGAATGTTGCAGCCGACCA 297
Query 302 AAGACGGTGGGGACCGGAAAACTCTCTTACGGTTTCAAAGACATCAGTTTCGCACCATAC 361
||||||||||||||||||||||||||||||||||| |||||||||||||| | ||||||
Sbjct 298 AAGACGGTGGGGACCGGAAAACTCTCTTACGGTTTTAAAGACATCAGTTTTGTGCCATAC 357
Query 362 GGTGAGTATTGGCGAGAAGTGCGAAAACTCGCGGTTATCGAGCTTTTTAGCTCT-AAAAA 420
||||||||||||| ||| |||||||||||||||||| ||| ||||||||| || |||||
Sbjct 358 AGTGAGTATTGGCGGGAAATGCGAAAACTCGCGGTTACCGAACTTTTTAGC-CTTAAAAA 416
Query 421 GGTTCAATCTTTTAGGTATATAAGAGAGGAAGAGGTCGACTTTATGGTCAAGAAAGTGTC 480
||||||||||| |||||||||||||| ||||||| |||| |||||||| |||||| ||||
Sbjct 417 GGTTCAATCTTATAGGTATATAAGAGGGGAAGAGATCGAATTTATGGTGAAGAAATTGTC 476
Query 481 GGAATCAGCTTTGAAGCAAGCTCCTGTGGATCTAAGCAAAACCTTTTTCTCCCTCACCGC 540
|||||||||||||||||| |||||||||||||| | | || ||||||||||||||
Sbjct 477 AGAATCAGCTTTGAAGCAATCTCCTGTGGATCTA--C----C-TTCTTCTCCCTCACCGC 529
Query 541 AAGCATCATTTGTAGAGTAGCTTT-GGGACAGAATTTCCATGAAAGCGGCTTTGTTATCG 599
|||||| |||| ||||||||| || ||| | ||||||||| || ||||||| ||||||
Sbjct 530 AAGCATAATTTTTAGAGTAGCCTTAGGG-CGGAATTTCCACGAGAGCGGCTCCATTATCG 588
Query 600 ATCAAGATAGGATCGAAGAACTTGTTACCGAATC-AGCGGA-AGCTCTAGGGACTTTCAC 657
|||| || |||| |||||||||||||||| | | | | |||| |||| | ||| ||
Sbjct 589 ATCAGGAGGGGATTGAAGAACTTGTTACCGCGGCTA-CA-ACAGCTATAGGAAGTTTTAC 646
Query 658 TTTCTCTGACTTCTTCCCTGGTGGACTTGGAAGATTCCTAGATTGGTTGTTTCA-ACG-A 715
|||||| ||||||||||| ||||||||||||||||| ||||||| ||||||| ||| |
Sbjct 647 TTTCTCGGACTTCTTCCCAAGTGGACTTGGAAGATTCTTAGATTGCTTGTTTCGTACGCA 706
Query 716 CACAAGAGTATTAACAAAGTCTTCA-AGGAA-CTTGATGCTTTTTATCAGCATGTGATTG 773
|||| | ||| |||||||||| | || || |||||||||||||| |||||||||||||
Sbjct 707 AACAA-A-TATAAACAAAGTCT-CGGAG-AAGCTTGATGCTTTTTACCAGCATGTGATTG 762
Query 774 ATGATCACTTGAAGCCAG-A-CGGAAGGAAAAATCA--AGATATTGTCACCTTGATTTTG 829
||||||||||||||||| | | ||| || ||||||||| ||||||| ||
Sbjct 763 ATGATCACTTGAAGCCATCAACTTT-GGATTCCTCCGGAGATATTGTTGCCTTGATGTTA 821
Query 830 GATATGATCGATAAACAAGAA-ATTTCAGATGCTTTCAAACTCAACATGGATAATC-TCA 887
|||||||| | ||| ||| | || ||||| |||||| ||||| ||||||| | |||
Sbjct 822 GATATGATAAAGAAAAAAGGACATAA-AGATGATTTCAAGCTCAATGTGGATAA-CATCA 879
Query 888 AGGCAATTGTCATGG 902
| ||| | ||||||
Sbjct 880 AAGCAGTCCTCATGG 894
Score = 593 bits (321), Expect = 1e-168
Identities = 521/615 (85%), Gaps = 23/615 (4%)
Strand=Plus/Plus
Query 906 TATTTCTCGCGGGGATAGATACGA-GCGCGGTAACTATGATTTGGGCGATGACAGAACTT 964
||||||||||||||||||| || | |||| |||| ||||||||||||||||| || ||
Sbjct 1011 TATTTCTCGCGGGGATAGACAC-AGGCGCCATAACAATGATTTGGGCGATGACCGAGCTC 1069
Query 965 ATT-AGAAACCCTAGAGTGATGAAGAAAGCTCAAGAAAATATTCGAACCACCCTCGGTCT 1023
|| | ||||||| ||||||||||| ||||||||||||||| ||| | |||||| ||
Sbjct 1070 GTTAAAAAACCCT-TAGTGATGAAGAGAGCTCAAGAAAATATCCGAGGCGTCCTCGGGCT 1128
Query 1024 CAAAAGGGAAAGAATCACCGAAGAAGATCTAGGCAAAGTTGAGTACTTGAACCACATAAT 1083
|||||| || |||||||| |||||||| ||| ||||| |||| | |||||| || || |
Sbjct 1129 CAAAAGAGATAGAATCACTGAAGAAGACCTATGCAAATTTGATTGCTTGAAACATATTGT 1188
Query 1084 CAAGGAAACATTCAGGTTACACCCAGCACTTCCATTTGTGGTTCCAAGGGAAACAATGTC 1143
|||||||||||| || ||||||||| || |||||||| |||| |||||||||||||| ||
Sbjct 1189 CAAGGAAACATTAAGATTACACCCACCAGTTCCATTTTTGGTCCCAAGGGAAACAATATC 1248
Query 1144 TCACATCAAGATCCAAGGCTACGACATTCCCCCGAAAACGCAAATCC-AGCTTAACG--- 1199
|||||||||||| ||||||||||| ||||| || ||||||||||||| || ||||||
Sbjct 1249 TCACATCAAGATTCAAGGCTACGATATTCCACCAAAAACGCAAATCCAAG-TTAACGTAT 1307
Query 1200 T--G--TGGACGATTGGACGTGACCCTAAGCGTTGGACCGACCCTGAAGAATTCATCCCT 1255
| | |||||||| ||||||||||| ||||||||||||||||||||||||||| ||||
Sbjct 1308 TACGTATGGACGATCGGACGTGACCCCAAGCGTTGGACCGACCCTGAAGAATTCCGCCCT 1367
Query 1256 GAGA-GATTTGCAAATAGTTCTGTAGATTTTAGAGGACAACACTTTGACCTAT-TACCGT 1313
|| | | |||||||||| || |||||||||||||||||||||||||||| | | ||||||
Sbjct 1368 GA-ACGGTTTGCAAATACTTGTGTAGATTTTAGAGGACAACACTTTGACTT-TCTACCGT 1425
Query 1314 TTGGTTCTGGTCGAAGGATTTGTCCCGGGATGCCAATGGCGATTGCTACCGTGGAACTCG 1373
||||||||||||||||||| ||||||| ||| |||||||||||||||||||||| || |
Sbjct 1426 TTGGTTCTGGTCGAAGGATCTGTCCCGCGATATCAATGGCGATTGCTACCGTGGAGCTAG 1485
Query 1374 CATTGATGAATTTGCTTTA-TTATTTCGATTGGAGTAT-GCCTGATGGGATGAAAGGTGA 1431
| |||||||||||||| | || |||||||||||| || ||||||||||||||||| |||
Sbjct 1486 GACTGATGAATTTGCTTGACTT-TTTCGATTGGAG-ATTGCCTGATGGGATGAAAGTTGA 1543
Query 1432 AAACATTGATATGGAAGAAGCTGGTAATATCTCCATTGTCAAGAAAATACCTCTTCGAC- 1490
| |||||||||| ||||||||||||||| || | | ||||||||| ||| | || ||
Sbjct 1544 AGACATTGATATAGAAGAAGCTGGTAATGTCACGGTAGTCAAGAAACTACTTATTT-ACC 1602
Query 1491 TTGTGCCCGGTCAAC 1505
|||||||| |||||
Sbjct 1603 TTGTGCCCCTTCAAC 1617
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 78865056195
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5