BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg471467
Length=1686
Score E
Sequences producing significant alignments: (Bits) Value
AT1G13140.1 | Symbols: CYP86C3 | cytochrome P450, family 86, su... 2420 0.0
AT1G13150.1 | Symbols: CYP86C4 | cytochrome P450, family 86, su... 1657 0.0
> AT1G13140.1 | Symbols: CYP86C3 | cytochrome P450, family 86,
subfamily C, polypeptide 3 | chr1:4478491-4480325 REVERSE LENGTH=1835
Length=1835
Score = 2420 bits (1310), Expect = 0.0
Identities = 1500/1594 (94%), Gaps = 4/1594 (0%)
Strand=Plus/Plus
Query 1 ATGTCTTTAACAGAGAGAGTTTATAATCATCTTTGTCTTTCCGATGTTTCTCTGGCCTTG 60
||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 76 ATGCCTTTAACAGAGAGAGTTTATAATCATCTTTGTCTGTCCGATGTTTCTCTGGCCTTG 135
Query 61 TTGGGACTCTTTGTTTTCTGTTGCGTGCGTGAGAAGGTAACCAAAAAGCAGGGGCCAACG 120
|||||||| |||||||||||||| |||||||||||||| || ||||||| ||||||||||
Sbjct 136 TTGGGACTGTTTGTTTTCTGTTGTGTGCGTGAGAAGGTTACTAAAAAGCTGGGGCCAACG 195
Query 121 ATATGGCCTGTGTTCGGAATAACTCCAGAGTTCTTCTTTCACAGGAATGATGTTTATGGT 180
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 196 ATATGGCCTGTGTTCGGAATTACTCCAGAGTTCTTCTTTCACAGGAATGATGTTTATGGT 255
Query 181 TGGGTC-ACAAGATGTTTGAAAAAATGTCGAGGTACTTTTCTCTATAACGGAATCTGGCT 239
|||| | ||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 256 TGGG-CTACAAGATGTTTGAAAAAATGTCGAGGTACCTTTCTCTATAACGGAATCTGGCT 314
Query 240 TGGTGGGTCTTCTGGAGCTGTGACTTGTGTCCCTGCGAACGTCGAATACATGCTCAAGAC 299
||||||||| | |||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 315 TGGTGGGTCGTATGGAGCTGTGACTTGTGTCCCTGCGAACGTTGAATACATGCTCAAGAC 374
Query 300 TAACTTCAAGAACTTCCCAAAAGGTGCCTTTTTCAAAGAACGGTTTGATGATCTGCTTGA 359
||||||||||||||||||||||||||| ||||||||||||||||| |||||||||| ||
Sbjct 375 TAACTTCAAGAACTTCCCAAAAGGTGCGTTTTTCAAAGAACGGTTCAATGATCTGCTCGA 434
Query 360 GGATGGTATCTTTAATGCTGATGCTGAGTCTTGGAAGGAGCAGCGACGGATCATCATAAC 419
|||||||||||| ||||||||||||||||||||||||||||| |||||||||||||| ||
Sbjct 435 GGATGGTATCTTCAATGCTGATGCTGAGTCTTGGAAGGAGCAACGACGGATCATCATTAC 494
Query 420 CGAAATGCATTCAACCAGGTTCGTGGAGCATTCCTTTCAGACTACACAAGATTTGGTAAG 479
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 495 CGAAATGCATTCAACCAGGTTCGTGGAGCATTCCTTTCAGACAACACAAGATTTGGTAAG 554
Query 480 GAAGAAGCTGTTAAAGGTGATGGAGAATTTTGCAAGTTCTCAAGAGGCATTCGACCTCCA 539
|||||||||||||||||||||||||| ||| ||||| || |||||||| || ||||| ||
Sbjct 555 GAAGAAGCTGTTAAAGGTGATGGAGAGTTTCGCAAGATCACAAGAGGCTTTTGACCTTCA 614
Query 540 AGATGTGCTCTTGCGCTTGACATTTGACAACATCTGCATCGCCGGTCTAGGTGATGACCC 599
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 615 AGATGTGCTCTTGCGTTTGACATTTGACAACATCTGCATCGCCGGTCTAGGTGATGATCC 674
Query 600 GGGAACTCTGGATTCTGATCTTCCCCTTGTTCCATTTGCTCAAGCTTTTGAAGAAGCAAC 659
|||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||
Sbjct 675 AGGAACTCTGGATTCTGATCTCCCCCTTGTTCCATTCGCTCAAGCTTTTGAAGAAGCAAC 734
Query 660 GGAATCTACGCTGTTTAGATTCATGATTCCTCCTTTTATATGGAAACCCTTGAAGTTCTT 719
||||||||| ||||||||||||||||||||||||| |||||||||||| ||||||||||
Sbjct 735 GGAATCTACTATGTTTAGATTCATGATTCCTCCTTTCATATGGAAACCCCTGAAGTTCTT 794
Query 720 CGACATCGGGTATGAGAAAAGTCTCAGGAAAGCTGTTGAGGTCGTCCATGAGTTTGTCGA 779
||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||
Sbjct 795 CGACATCGGGTATGAGAAAGGTCTCAGGAAAGCTGTTGATGTCGTCCATGAGTTTGTCGA 854
Query 780 CAAGATGGTTGTGGATCGTATTTGCAAACTCAAAGAGGAAGGAACGTTAGGAAACAGATC 839
||||||||||||||||||||| ||||| |||||||| |||||||||||||| ||||||||
Sbjct 855 CAAGATGGTTGTGGATCGTATCTGCAAGCTCAAAGAAGAAGGAACGTTAGGCAACAGATC 914
Query 840 CGATGTCCTCTCGCGGATTATTGAGATAGAAAATCACAAGAAGACTGATGAAAAAGATCC 899
|||||||||||| |||||||||||||||||| |||||||| ||||||||||||||||||
Sbjct 915 CGATGTCCTCTCAAGGATTATTGAGATAGAAAGTCACAAGACGACTGATGAAAAAGATCC 974
Query 900 TTCCACCATCAAATTCTTTAGACAATTCTGCACAAGTTTCATCTTAGCTGGACGAGACAC 959
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 975 TTCTACCATCAAATTCTTTAGACAATTCTGCACAAGTTTCATCTTAGCTGGACGAGACAC 1034
Query 960 AAGTTCAGTTGCACTTACATGGTTCTTCTGGGTGATACAGAAACATCCAGAAGTCGAAAA 1019
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1035 AAGTTCAGTTGCACTTACATGGTTCTTCTGGGTGATACAGAAACATCCAGAAGTCGAAAA 1094
Query 1020 CAAAATCATCTGCGAGATAAAAGAAATCTTGAGACAGCGAGGGGATTCTCCAACCAGCAA 1079
|||||||||| | ||||||| |||||||| |||||||||||||||||||||||||||||
Sbjct 1095 CAAAATCATCCGTGAGATAAGTGAAATCTTAAGACAGCGAGGGGATTCTCCAACCAGCAA 1154
Query 1080 CAATGAGAGTCTCTTCACGGTCAAAGAACTAAACGACATGGTATACCTACAAGCAGCACT 1139
|| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 1155 AAACGAGAGTCTCTTCACGGTCAAAGAACTAAACGACATGGTATATCTACAAGCAGCACT 1214
Query 1140 TTCAGAAACCATGAGACTATACCCTCCAATACCAATGGAAATGAAACAAGCCATTGAAGA 1199
||||||||| |||||||| ||||||||||||||||||||||||||||||||||| |||||
Sbjct 1215 TTCAGAAACAATGAGACTTTACCCTCCAATACCAATGGAAATGAAACAAGCCATCGAAGA 1274
Query 1200 CGATGTTTTTCCCGATGGGACTTTCATACGTAAAGGTTCACGGGTTTACTTTGCGACTTA 1259
|||||| |||||||||||||| |||||||||||||| |||||||||||||||||||||||
Sbjct 1275 CGATGTGTTTCCCGATGGGACATTCATACGTAAAGGCTCACGGGTTTACTTTGCGACTTA 1334
Query 1260 CGCCATGGGAAGGATGGAATCCATATGGGGAAAAGACTGTGAATCATTCAAACCAGAGAG 1319
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1335 CGCCATGGGAAGGATGGAATCCATATGGGGAAAAGACTGTGAATCATTCAAACCAGAGAG 1394
Query 1320 ATGGATCCAAGCAGGGAATTTCGTGAACGAGGAACAATTCAAATACGTTGTGTTTAATGC 1379
|||||||||| |||||||||||||||| || || ||||| |||||||||||||| |||||
Sbjct 1395 ATGGATCCAATCAGGGAATTTCGTGAATGATGACCAATTTAAATACGTTGTGTTCAATGC 1454
Query 1380 TGGGCCAAGGCTGTGTTTAGGAAAAACATTTGCTTATCTGCAGATGAAGACAGTCGCTGC 1439
||| ||||||||||||||||| |||||||||||||| || |||||||||||| |||||||
Sbjct 1455 TGGACCAAGGCTGTGTTTAGGGAAAACATTTGCTTACCTACAGATGAAGACAATCGCTGC 1514
Query 1440 TTCAGTCTTGT-TGAGGTACTCTATCAAGGTTGCTAAAGATCATATCGTAGTCCCCAGAG 1498
||||||| ||| | |||||||| || |||||||||||||||||| | || ||||||||||
Sbjct 1515 TTCAGTCCTGTCT-AGGTACTCAATAAAGGTTGCTAAAGATCATGTAGTTGTCCCCAGAG 1573
Query 1499 TTACGACAACTTTGTACATGAAGCACGGTCTCAAGGTAACCATCTCACCAAAGTCCCTGG 1558
| || ||||| |||||||||| |||||||||||||||||||||||| |||||||||| |
Sbjct 1574 TAACTACAACCTTGTACATGAGGCACGGTCTCAAGGTAACCATCTCGTCAAAGTCCCTTG 1633
Query 1559 AAGATAAGGTACATGTTCAAGATTAGAGAATCAA 1592
|||| ||| |||| |||||||| ||| |||||||
Sbjct 1634 AAGAGAAGATACACGTTCAAGACTAGTGAATCAA 1667
> AT1G13150.1 | Symbols: CYP86C4 | cytochrome P450, family 86,
subfamily C, polypeptide 4 | chr1:4481875-4483696 REVERSE LENGTH=1822
Length=1822
Score = 1657 bits (897), Expect = 0.0
Identities = 1364/1587 (86%), Gaps = 42/1587 (3%)
Strand=Plus/Plus
Query 1 ATGTCTTTAACAGAGAGAGTTTATAATCATCTTTGTCT-TTCCGATGTTTC-TCTGGCCT 58
||||||||||||||| || ||||||||||||||| ||| || |||| | | ||| |||
Sbjct 113 ATGTCTTTAACAGAGCGACTTTATAATCATCTTTCTCTCTT-CGAT-CTACTTCTTTCCT 170
Query 59 TGTTGGGACTCTTTGTTTTCTGTTGCGTGCGTGAGAAGGTAACCAAAAAGCAG-GGGCCA 117
||||||| |||||||||||||| || ||||||||||| ||||||| |||| | || |||
Sbjct 171 TGTTGGGGCTCTTTGTTTTCTGCTGTTTGCGTGAGAAGTTAACCAACAAGC-GTGGACCA 229
Query 118 ACGATATGGCCTGTGTTCGGAATAACTCCAGAGTTCTTCTTTCACAGGAATGATGTTTAT 177
| | ||||||| || |||||||| ||| |||||| |||||||| | |||||||| |||
Sbjct 230 ATGCTATGGCCAGTTTTCGGAATTACTTTAGAGTTTTTCTTTCATATAAATGATGTCTAT 289
Query 178 GGTTGGGTCACAA-GATGTTTGAAAAAATGTCGAGGTACTTTTCTCTATAACGGAATCTG 236
|| |||||||||| || |||||||||||||||||||||| ||||| ||| ||| | ||
Sbjct 290 GGATGGGTCACAAGGA-GTTTGAAAAAATGTCGAGGTACCTTTCTTTATCGGGGAGTTTG 348
Query 237 GCTTGGTGGGTCTTCTGGAGCTGTGACTTGTGTCCCTGCGAACGTCGAATACATGCTCAA 296
||||| |||||||| |||||||||||||||||| ||||| || ||||| |||||||||||
Sbjct 349 GCTTGATGGGTCTTATGGAGCTGTGACTTGTGTTCCTGCAAATGTCGAGTACATGCTCAA 408
Query 297 GACTAACTTCAAGAACTTCCCAAAAGGTGCCTT-TTTCAAAGAACGGTTTGATGATCTGC 355
|||||||||||||||||||||||||||| |||| ||| |||| ||||| |||||||||
Sbjct 409 GACTAACTTCAAGAACTTCCCAAAAGGTACCTTCTTTAAAAGC-CGGTTCAATGATCTGC 467
Query 356 TTGAGGATGGTATCTTTAATGCTGATGCTGAGTCTTGGAAGGAGCAGCGACGGATCATCA 415
| ||||| ||||||||||||||||||| ||| |||||||||||||| |||||||||||||
Sbjct 468 TCGAGGAAGGTATCTTTAATGCTGATGATGATTCTTGGAAGGAGCAACGACGGATCATCA 527
Query 416 TAACCGAAATGCATTCAACCAGGTTCGTGGAGCATTCCTTTCAGACTACACAAGATTTGG 475
|||||||||||||||||||| |||| || ||||||||||||||||| |||||| ||||||
Sbjct 528 TAACCGAAATGCATTCAACCGGGTTTGTAGAGCATTCCTTTCAGACAACACAACATTTGG 587
Query 476 TAAGGAAGAAGCTGTTAAAGGTGATGGAGAATTTTGCAA-GTTCTCAAGAGGCATTCGAC 534
|||||||||||||||| ||||||||||||| ||| |||| || | ||||| || |||||
Sbjct 588 TAAGGAAGAAGCTGTTGAAGGTGATGGAGAGTTTCGCAAAGT-CACAAGAAGCTTTCGAT 646
Query 535 CTCCAAGATGTGCTCTTGCGCTTGACATTTGACAACATCTGCATCGCCGGTCTAGGTGAT 594
|||||||| ||| || |||||||||| ||||||| ||||||| | || |||||||||| |
Sbjct 647 CTCCAAGACGTGTTCCTGCGCTTGACGTTTGACATCATCTGCCTTGCGGGTCTAGGTGCT 706
Query 595 GACCCGGGAACTCTGGAT-TCTGATCTTCCCCTTGTTCCATTTGCTCAAGCTTTTGAAGA 653
||||||| |||||| | | | ||||||||||| |||||||||||| |||||||||||||
Sbjct 707 GACCCGGAAACTCTAGCTGT-TGATCTTCCCCAAGTTCCATTTGCTAAAGCTTTTGAAGA 765
Query 654 AGCAACGGAATCTACGCTGTTTAGATTCATGATTCCTCCTTTTATATGGAAACCCTTGAA 713
|||||| || ||||| ||||||||||||||||| ||||| ||||||||||| ||| |||
Sbjct 766 AGCAACAGAGTCTACACTGTTTAGATTCATGATCCCTCCATTTATATGGAAGCCCATGAG 825
Query 714 GTTCTTCGACATCGGG-TATGAGAAAAG-TCTCAGGAAAGCTGTTGAGGTCGTCCATGAG 771
|||| |||||| | || ||||| ||||| |||||||| |||||||| |||||| || | |
Sbjct 826 GTTCCTCGACA-CAGGATATGA-AAAAGGTCTCAGGATAGCTGTTGGGGTCGTGCACGGG 883
Query 772 TTTGTCGACAAGATGGTTGTGGATCGTATTTGCAAACTCAAAGAGGAAGGAACGTTAGGA 831
|| |||||||||||| ||||||||||||| ||| | ||||| || |||| |||||||| |
Sbjct 884 TTCGTCGACAAGATGATTGTGGATCGTATCTGCGAGCTCAAGGAAGAAGAAACGTTAG-A 942
Query 832 -AACAGATCCGATGTCCTCTCGCGGATTATTGAGATAGAAAATCACAAGAAGACTGA-TG 889
|| ||||| ||||| ||||| |||||||| ||||||| | ||| || ||| | ||
Sbjct 943 CAATAGATCTGATGTTCTCTCAAGGATTATTCAGATAGAGAGTCATAA-AAGGGAAAATG 1001
Query 890 AAAAAGATCCTTCCACCATCAAATTCTTT-AGACAATTCTGCACAAGTTTCATCTTAGCT 948
| | |||||||||||||| | ||| ||| |||||||| ||||||||||| || ||||||
Sbjct 1002 AGATTGATCCTTCCACCATTAGATT-TTTCAGACAATTTTGCACAAGTTTTATATTAGCT 1060
Query 949 GGACGAGACACAAGTTCAGTTGCACTTACATGGTTCTTCTGGGTGATACAGAAACATCCA 1008
|||||||| |||||||| ||||||||| ||||||||| |||||||||||||||||| |||
Sbjct 1061 GGACGAGATACAAGTTCTGTTGCACTTTCATGGTTCTGCTGGGTGATACAGAAACACCCA 1120
Query 1009 GAAGTCGAAAACAAAATCATCTGCGAGATAAAAGAAATCTTGAGACAGCGAGGGGATTCT 1068
|| || ||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 1121 GAGGTTGAAAACAAAATCATCTGCGAGATAAGAGAAATCTTGAGACAGCGAGGGGATTCT 1180
Query 1069 CCAACCAGCAACAATGAGAGTCTCTTCACGGTCAAAGAACTAAACGACATGGTATACCTA 1128
||||||||||| || ||||| |||||||| ||||||||||||||| ||||||||||||||
Sbjct 1181 CCAACCAGCAAAAACGAGAGCCTCTTCACAGTCAAAGAACTAAACAACATGGTATACCTA 1240
Query 1129 CAAGCAGCACTTTCAGAAAC-CATGAGACTATACCCTCCAATACCAATGGAAATGAAACA 1187
||||||||||| |||||||| | ||||||| | ||||||||| |||||||||||||||||
Sbjct 1241 CAAGCAGCACTATCAGAAACTC-TGAGACTGTTCCCTCCAATTCCAATGGAAATGAAACA 1299
Query 1188 AGCCATTGAAGACGATGTTTTTCCCGATGGGACTTTCATACGTAAAGGTTCACGGGTTTA 1247
|||||||||||| ||||| || || |||||||| ||| || | |||||||||||||||||
Sbjct 1300 AGCCATTGAAGATGATGTGTTACCAGATGGGACATTCGTAAGAAAAGGTTCACGGGTTTA 1359
Query 1248 CTT-TGCGA-CTTACGCCATGGGAAGGATGGAATCCATATGGGGAAAAGACTGTGAA-TC 1304
||| | | | || | |||||||||||||||||||| || ||||||||||| |||||| |
Sbjct 1360 CTTCT-CAATCT-ATGCCATGGGAAGGATGGAATCAATCTGGGGAAAAGATTGTGAAATT 1417
Query 1305 ATTCAAACCAGAGAGATGGATCCAAGCAGGGAA-TTTCGTGAACGAGGAACAATTCAAAT 1363
|||| ||||||||||||||||||||||||||| ||| || | || || || |||||||
Sbjct 1418 -TTCAGACCAGAGAGATGGATCCAAGCAGGGAAGTTT-GTCAGTGACGACCAGTTCAAAT 1475
Query 1364 ACGTTGTGTTTAATGCTGGGCCAAGGCTGTGTTTAGGAAAAACATTTGCTTATCTGCAGA 1423
||||||| || |||||||| ||||||||||| ||||||||||||||||||| |||||||
Sbjct 1476 ACGTTGTATTCAATGCTGGACCAAGGCTGTGCATAGGAAAAACATTTGCTTACCTGCAGA 1535
Query 1424 TGAAGAC-AGTCGCTGCTTCAGTCTTGTTGAGGTACTCTATCAAGGTTG-CTAAAGATCA 1481
|||||| | | ||||||||||| |||||||||||||| |||||||||| | || |||||
Sbjct 1536 TGAAGATGA-TAGCTGCTTCAGTTTTGTTGAGGTACTCAATCAAGGTTGTCCAA-GATCA 1593
Query 1482 TATCGTAGTCCCC-AGAGTTACGAC-AACTTTGTACATGAAGCACGGTCTCAAGGTAACC 1539
| || ||| |||| ||||| || || ||||| |||||||||| |||| ||||| ||||||
Sbjct 1594 TGTCATAG-CCCCGAGAGTCACAACTAACTT-GTACATGAAGTACGGCCTCAAAGTAACC 1651
Query 1540 ATCTCACCAAAGTCCCTGGAAGATAAG 1566
||| |||||| ||| |||||||| |||
Sbjct 1652 ATCACACCAAGGTCGCTGGAAGAGAAG 1678
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 83332904700
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5