BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg471469 Length=2641 Score E Sequences producing significant alignments: (Bits) Value AT1G13160.1 | Symbols: | ARM repeat superfamily protein | chr1... 4189 0.0 AT4G31520.1 | Symbols: | SDA1 family protein | chr4:15278281-1... 732 0.0 > AT1G13160.1 | Symbols: | ARM repeat superfamily protein | chr1:4484584-4488577 FORWARD LENGTH=2654 Length=2654 Score = 4189 bits (2268), Expect = 0.0 Identities = 2511/2627 (96%), Gaps = 21/2627 (1%) Strand=Plus/Plus Query 23 CAAAACCTCTGAAAATGGCCGG-ATCTCTAGGTTTAACGCCGGAATCCTTAAAGGCATCT 81 ||||||||| || |||| |||| | ||||||||||||||||| |||||||||||||||| Sbjct 37 CAAAACCTCCGATAATGTCCGGCA-GTCTAGGTTTAACGCCGGCATCCTTAAAGGCATCT 95 Query 82 GGCCGGAGCTCAGAGAATCTCAGCCTTCTTATCCTTCAAGGTAAAATCAAACGTGACCCA 141 ||||||||||| |||||| |||| ||||||| |||||||||||||||||||||||||||| Sbjct 96 GGCCGGAGCTCCGAGAATGTCAGTCTTCTTACCCTTCAAGGTAAAATCAAACGTGACCCA 155 Query 142 GAAGGTTACGAAACAGAGCTCCAGTTGATTTACAAACAGTTCAAAACCTCCGTCGATCTC 201 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct 156 GAAGGTTACGAAACAGAGCTCCAATTGATTTACAAACAGTTCAAAACCTCCGTCGATCTC 215 Query 202 TTCCA-GCAACAAGCAGCTCTCAGTTTCTCCTCCGTTGGTGGCATTGGATCTGACCCTTC 260 ||||| | ||| |||||||||||||||||||||| |||||||||||| ||||||||||| Sbjct 216 TTCCATG-AACTAGCAGCTCTCAGTTTCTCCTCCACTGGTGGCATTGGCTCTGACCCTTC 274 Query 261 TGTTTCCAAAGACCTCGGTGACCGTGCCATGTTTCTAGCTCACGTTACTCCCTTTTACCC 320 |||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 275 TGTTTCGAAAGACCTCGGCGACCGTGCCATGTTTCTAGCTCACGTTACTCCCTTTTACCC 334 Query 321 GAAGCAACTCTCGGAGTTTCCAGCTCAATTGACTGACTTACTCCGTACTTCTTGCTTAGC 380 |||||||||| ||| ||||||||||||||| |||| |||||||||||||| |||||||| Sbjct 335 GAAGCAACTCGCGGCGTTTCCAGCTCAATTAACTGGTTTACTCCGTACTTCGTGCTTAGC 394 Query 381 AATGCCCTCGGGTCTTCGAAACCATGTTGCACAAGCTCTGATTCTTCTAATGAATCGAAA 440 ||||||||||| |||||||||||| |||||||||||||||| ||||||||||||||||| Sbjct 395 TATGCCCTCGGGGCTTCGAAACCATATTGCACAAGCTCTGATCCTTCTAATGAATCGAAA 454 Query 441 GAGTCTTGTCATCGAGGATTTGCTGGCTTTATTTCTGGATATTCAGACTCTTGGTGACAA 500 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 455 GAGTCTTGTCATCGAGGATTTGCTGGCTTTGTTTCTGGATATTCAGACTCTTGGTGACAA 514 Query 501 AAACCTGCGAGCTCTTGCTTTTGGTCACATTGTTCAAACCATTCGTAAGATGAGTATCAC 560 |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 515 AAACCTGCGAAATCTTGCTTTTGGTCACATTGTTCAAACCATTCGTAAGATGAGTATCAC 574 Query 561 TGATCCCAAGCACAAATCACTTCAGAAGATTGTGATCTCTATGTTAGAGCAAGAAGATGA 620 |||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||| Sbjct 575 CGATCCCAAGCACAAATCACTTCAGAAGATTGTAATCTCTATGTTGGAGCAAGAAGATGA 634 Query 621 AGCAAAGGCTAAGAGAGCACTTGCTACTCTCTGTGCGCTACACAAGAAAAAGATATGGCT 680 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct 635 AGCAAAGGCTAAGAGAGCACTTGCTACTCTCTGTGCGCTACACAAGAAAAAGATCTGGCT 694 Query 681 TGGTGATAAAAATGAAAGAGTTGCAATTGCGATTTGTGAAGCCTGCTTTCATTCTTCACC 740 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 695 TGGTGATAAAAATGAAAGAGTTGCAATTGCGATTTGTGAAGCCTGCTTTCATTCTTCACC 754 Query 741 TAGGATAATGATCTCTGCTCTTCGATTTCTTCTTGACTATGAGAACATTGACGATGATGA 800 |||||| ||||| || |||||||| ||||||||||| ||||||||||| ||||||||||| Sbjct 755 TAGGATTATGATTTCCGCTCTTCGGTTTCTTCTTGATTATGAGAACATAGACGATGATGA 814 Query 801 CGATAGTGATGCTGAAAGCGATGATGACGAGGA-TAATAAGAAAATAGATCAGGTTGTGA 859 ||||||||||||||||||||||||||||||||| | | |||||||||||||||||||||| Sbjct 815 CGATAGTGATGCTGAAAGCGATGATGACGAGGAGTCA-AAGAAAATAGATCAGGTTGTGA 873 Query 860 TTAATCGACAGGCTATTTACAAGGCAAACAACAAAGGTACATCCTCTAGCAAGAAGAAAA 919 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 874 TTAATCGACAGGCTGTTTACAAGGCAAACAACAAAGGTACATCCTCTAGCAAGAAGAAAA 933 Query 920 AGCAAGCAAAACTACAGCGTGCAGTGAAAAGTATTAAAAGAAAGCAGCGTTCGTCGTCTG 979 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 934 AGCAAGCAAAACTTCAGCGTGCAGTGAAAAGTATTAAAAGAAAGCAGCGTTCGTCGTCTG 993 Query 980 AGAACACCACTTCAACATTTTCACCTCTTAATCATTTAAATGATGCGCAGAAATTCGCAG 1039 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 994 AGAACACCACTTCAACATTTTCACCTCTTAATCATTTAAATGATGCGCAGAAATTCGCAG 1053 Query 1040 AGAGATTGTTTTCCCGTCTTCAGACCATCAAGGGCTCTGGTGAACGTGTTGAGACCAGGT 1099 ||| ||||||||||||||||||||||||||||||| |||||||||||||||||| |||| Sbjct 1054 AGAAATTGTTTTCCCGTCTTCAGACCATCAAGGGCAGTGGTGAACGTGTTGAGACTAGGT 1113 Query 1100 TGATGATGATTAAAGTTATTGCTCGCACAATTGGTCTTCACAAGTTGCATTTGCTAAGTT 1159 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct 1114 TGATGATGATTAAAGTTATTGCTCGCACAATTGGTCTTCACAAGTTGCATTTACTAAGTT 1173 Query 1160 TTTATTCTTTTCTTCAAAACTACGCTATGCCGCATGTAAAGGACATTACACAAATACTTG 1219 | ||| |||||||||||||||| ||| ||||||||||||||||||||||||||||||||| Sbjct 1174 TCTATCCTTTTCTTCAAAACTATGCTCTGCCGCATGTAAAGGACATTACACAAATACTTG 1233 Query 1220 CAGCAGCAGTTCAATCTTGCCATGATGGGGTTCCTTCTGATGCTGTGGAGCCACTGTTCA 1279 |||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||| Sbjct 1234 CAGCAGCAGTTCAATCTTGCCACGATGGGGTTCCTTCTGATGTTGTGGAGCCACTGTTCA 1293 Query 1280 AGCAAATTGTGAATCAGTTTGTACACGACAAGTCACGTCCTGAGGCTATTGCTGTCGGAC 1339 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1294 AGCAAATTGTGAATCAGTTTGTACACGACAAGTCACGTCCTGAGGCTATTGCTGTCGGAC 1353 Query 1340 TCAATGTGGTACGAGAAATGTGCCTGAGGATTCACGACTTGATGACAGAAGAGTTGCTGC 1399 |||||||||| |||||||||||||||||| ||||||||||||||||||||||||| |||| Sbjct 1354 TCAATGTGGTGCGAGAAATGTGCCTGAGGGTTCACGACTTGATGACAGAAGAGTTACTGC 1413 Query 1400 AAGATCTTGCTCTGTATAAAAAGTCCCATGAAAAAGCCATCTCAGCAGCAGCTCGTTCCC 1459 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct 1414 AAGATCTTGCTCTGTATAAAAAGTCCCATGAAAAAGCCATCTCAGCAGCAGCACGTTCCC 1473 Query 1460 TCATAGCATTGTTCAGAGAGATCAACCCTTCGCTTCTGGTGAAAAAAGATCGTGGCCGTC 1519 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct 1474 TCATAGCATTGTTCAGAGAGATCAACCCTTCGCTTCTGGTTAAAAAAGATCGTGGCCGTC 1533 Query 1520 CTGGAGCTACCAT-TGCAAAACCTAAACAATATGGGGAGTCTAATGTCTTCAGCAATGTT 1578 ||||||||||| | | || | |||||||| ||||| |||||||||||||||||||||||| Sbjct 1534 CTGGAGCTACCGTCTTCATA-CCTAAACATTATGGAGAGTCTAATGTCTTCAGCAATGTT 1592 Query 1579 CCCAATGTTGAATTATTGCAAGAAAGTGATAATGAGAGTGGCTCTGATGGTGATCAAGAC 1638 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1593 CCTAATGTTGAATTATTGCAAGAAAGTGATAATGAGAGTGGCTCTGATGGTGATCAAGAC 1652 Query 1639 GATGATGACGTGGAGTTGCCTATCGGCGATGAAGTTGAGCAGGAGGTGATACCTGATGAT 1698 ||||||| |||||||||||||||||||||||| |||||||||||| ||||||||| |||| Sbjct 1653 GATGATGGCGTGGAGTTGCCTATCGGCGATGATGTTGAGCAGGAGCTGATACCTGGTGAT 1712 Query 1699 TGTGGAAGCGAGGACGAAGCTGAAGAAGATTCCAATGATGGTGATGATATGAATAACACT 1758 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 1713 TGTGGAAGCGAGGACAAAGCTGAAGAAGATTCCAATGATGGTGATGATATGAATAACACT 1772 Query 1759 GAAGATGATAGTGATATTGATACTTCAATAGGTGGTGATGAAGATGAAGAGGTGAATGAC 1818 ||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 1773 GAAGACGATAGTGATATAGATACTTCAATAGGTGGTGATGAAGATGAAGAGGTGAATGAC 1832 Query 1819 AGTGATGAAGCTGATACAGATTCGGAAAATGAGGAAATCGAAAGCGAAGAAGACGATGGA 1878 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 1833 AGTGATGAAGCTGATACAGATTCGGAAAATGAGGAAATCGAAAGCGAAGAAGAGGATGGA 1892 Query 1879 GAAGCTTCTGATTCTTCTGTAGAGGATAATGGAAACAAAGAGAAAGCTAAGGGCAAGAAG 1938 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 1893 GAAGCTTCTGATTCTTCTGTAGAGGATAGTGGAAACAAAGAGAAAGCTAAGGGCAAGAAG 1952 Query 1939 AGGAAGATTGTAGATTTTGATGCGAATCTTCTCTCTGCTGATACAAGCCTCCGAGCACTC 1998 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1953 AGGAAGATTGTAGATTTTGATGCGAATCTTCTCTCTGCTGATACAAGCCTCCGAGCACTC 2012 Query 1999 AAGAGATAT-GCAGAAGCAAAGAACGAAAAACCATCTTTTGATGAAAGTGATGGCATACT 2057 ||||||| | |||||||||||||||||||| || |||||||||||| ||||||||||||| Sbjct 2013 AAGAGAT-TCGCAGAAGCAAAGAACGAAAAGCCTTCTTTTGATGAAGGTGATGGCATACT 2071 Query 2058 TTCGAATGAGGACTTCCGAAAAATCAAAGA-ACTTCAGGCAAAGAAGGAAGCAAAAATTG 2116 |||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||| Sbjct 2072 TTCGAATGAGGACTTCCGAAAAATCAAA-ACACTTCAGGCAAAGAAGGAAGCAAAAATTG 2130 Query 2117 CATTGGCTCGAAAAGGATTCAAGGTTCCGGATTCTGATCAGCTAAGCAAGAAGCGGGTCG 2176 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 2131 CATTGGCTCGAAAAGGATTCAAGGTTCCGAATTCTGATCAGCTAAGCAAGAAGCGGGTCG 2190 Query 2177 ATCCAGCCAAACTTGAAGCTCACATAAGGCATAAACTAACAAAAGAACAAAGACTGGAAT 2236 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct 2191 ATCCAGCCAAACTTGAAGCTCACATAAGGCATAAACTAACAAAGGAACAAAGACTGGAAT 2250 Query 2237 TAGTTAAAGCGGGTAGGGAGGACAGAGGGAAATACAAATCCAAGGCTGCCGTCAAACAGA 2296 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2251 TAGTTAAAGCGGGTAGGGAGGACAGAGGGAAATACAAATCCAAGGCTGCCGTCAAACAGA 2310 Query 2297 AGAAGACGGGAGGATCAAGCAATAAACAGAAGGAGCACAGGAAGAATATGCCTCTTGCTG 2356 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2311 AGAAGACTGGAGGATCAAGCAATAAACAGAAGGAGCACAGGAAGAATATGCCTCTTGCTG 2370 Query 2357 CAATAAGATCAAAGGCTGGGAAATCAAAGCGAACTAAGAAGATGAAGAATAGCATCAGCG 2416 ||||||||||||||||||| |||||||| |||| |||||||||||||||||||||||||| Sbjct 2371 CAATAAGATCAAAGGCTGGTAAATCAAAACGAATTAAGAAGATGAAGAATAGCATCAGCG 2430 Query 2417 GAAGCCAGTTTAGAGGAAGGAAAGCTTGGAAGTGAAAAAATGACCTACA-CTCTTAATTC 2475 ||||||||||||||||||||||||||||||||||||||||||||| | | |||| ||||| Sbjct 2431 GAAGCCAGTTTAGAGGAAGGAAAGCTTGGAAGTGAAAAAATGACCAA-ATCTCTCAATTC 2489 Query 2476 TTCGGTCTCAAAACTGA-ACACAGTTTTGTTTTGGTTCATTTTTTGCATAATTATGTTTT 2534 ||| ||||||||||| | ||||||||||||||||||||| |||||||||||||||||||| Sbjct 2490 TTCCGTCTCAAAACT-ATACACAGTTTTGTTTTGGTTCAGTTTTTGCATAATTATGTTTT 2548 Query 2535 GTCCTATGCCTGCTGCAGTTTTGATATTGAGGTCTCAGCACAAAACGTTGTCCTTTTTCC 2594 || || || | ||||||||||||||||||||| || ||| |||| ||||| ||||||| Sbjct 2549 GTTCTTTG--T-CTGCAGTTTTGATATTGAGGTATCGGCATAAAA--TTGTCGTTTTTCC 2603 Query 2595 TGTCATCATACGTTTTATTTACAGTGGGAGTAATAAATTCCTGTTTT 2641 ||||||||||||||||||||||||||||| ||||||||| || |||| Sbjct 2604 TGTCATCATACGTTTTATTTACAGTGGGATTAATAAATTACTATTTT 2650 > AT4G31520.1 | Symbols: | SDA1 family protein | chr4:15278281-15281739 REVERSE LENGTH=2097 Length=2097 Score = 732 bits (396), Expect = 0.0 Identities = 639/749 (85%), Gaps = 46/749 (6%) Strand=Plus/Plus Query 1708 GAGGACGAAGCTGAAGAAGATTCCAATGATGGTGATGATATGAATAACACTGAAGATGAT 1767 |||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct 1390 GAGGACGAGGCTGAAGAAGATTCTAATGATGGTGATGATATGAATAACACTGAAGATGAT 1449 Query 1768 AGTGATATTGATACTTCAATAGGTGGTGATGAAGATGAAGAGGTGAATGACAGTGATGAA 1827 | | ||| | || |||| |||||||| |||||| |||||||||||||||| Sbjct 1450 A---CT-TTG----GT---TA-GTGGAGATGAAGAGGAAGAGAAGAATGACAGTGATGAA 1497 Query 1828 GCTGATACAGATTCGGAAAATGAGGAAATCGAAAGCGAAGAAGACGATGGAGAAGCTTCT 1887 || || || |||| || || ||| || || ||||| || | |||||||||||| Sbjct 1498 GCCGAGACTGATT-GG-----GA--AAA-CG-AA--GAAGATGA--A-GGAGAAGCTTCT 1542 Query 1888 GATTCTTCTGTAGAGGATAATGGAAACAAAGAGAAAGCTAAGGGCAAGAAGAGGAAGATT 1947 | || |||| || |||||||| ||||||||| ||||| ||||| |||||| || Sbjct 1543 G-------TG--GAGGGTAGTGGAAACAGAGAGAAAGCAAAGGGGAAGAAAAGGAAG-TT 1592 Query 1948 -GTAGATTTTGATGCGAATCTTCTCTCTGCTGATACAAGCCTCCGAGCACTCAAGAGATA 2006 |||||||||||||||| ||| ||| |||||||||||||||| |||||||| ||||||| Sbjct 1593 AGTAGATTTTGATGCGAGTCTCCTCGCTGCTGATACAAGCCTACGAGCACTAAAGAGATG 1652 Query 2007 TGCAGAAGCAAAGAACGAA-AAACCATCTTTTG-ATGAAAGTGATGGCATACTTTCGAAT 2064 ||||| ||| ||| ||| | | ||||||||| | ||||| |||||||||||||| ||| Sbjct 1653 CGCAGAGGCAGAGAGGGAACAGA-CATCTTTTGCA-GAAAGAGATGGCATACTTTCCAAT 1710 Query 2065 GAGGACTTCCGAAAAATCAAAGAACTTCAGGCAAAGAAGGAAGCAAAAATTGCATTGGCT 2124 |||||||||||||||||||||||| || ||| ||||||||| || ||| ||||||||||| Sbjct 1711 GAGGACTTCCGAAAAATCAAAGAAGTTAAGGGAAAGAAGGATGCGAAACTTGCATTGGCT 1770 Query 2125 CGAAAAGGATTCAAGGTTCCGGATTCTGATCAGCTAAGCAAGAAGCGGGTCGATCCAGCC 2184 ||||||||||| || ||||||||||||||| ||||||| ||||||| |||| |||||||| Sbjct 1771 CGAAAAGGATTGAAAGTTCCGGATTCTGATAAGCTAAGTAAGAAGCTGGTCAATCCAGCC 1830 Query 2185 AAACTTGAAGCTCACATAAGGCATAAACTAACAAAAGAACAAAGACTGGAATTAGTTAAA 2244 ||||||||||||||||||||||| ||||||| ||||||| |||| ||||| ||||||||| Sbjct 1831 AAACTTGAAGCTCACATAAGGCAGAAACTAATAAAAGAAGAAAGGCTGGAGTTAGTTAAA 1890 Query 2245 GCGGGTAGGGAGGACAGAGGGAAATACAAATCCAAGGCTGCCGTCAAACAGAAGAAGACG 2304 ||||||||||||||| |||||||||||||||||||| ||||| |||| ||||||||||| Sbjct 1891 GCGGGTAGGGAGGACCGAGGGAAATACAAATCCAAGACTGCCATCAAGCAGAAGAAGACC 1950 Query 2305 GGAGGATCAAGCAATAAACAGAAGGAGCACAGGAAGAATATGCCTCTTGCTGCAATAAGA 2364 |||||||| ||||||| ||||||||| |||| ||||||||||||||| |||||| ||||| Sbjct 1951 GGAGGATCGAGCAATAGACAGAAGGAACACAAGAAGAATATGCCTCTCGCTGCAGTAAGA 2010 Query 2365 TCAAAGGCTGGGAAATCAAAGCGAA-CTAAGAAGATGAAGAATAGC-ATCAGCGGAAGCC 2422 ||||||||||||||| |||||||| | ||||| |||||||||||| | ||||||||||| Sbjct 2011 TCAAAGGCTGGGAAAGCAAAGCGAGTC-AAGAAAATGAAGAATAGCCA-CAGCGGAAGCC 2068 Query 2423 AGTTTAGAGGAAGGAAAGCTTGGAAGTGA 2451 |||| |||||||||||||||||||||||| Sbjct 2069 AGTTCAGAGGAAGGAAAGCTTGGAAGTGA 2097 Score = 555 bits (300), Expect = 1e-156 Identities = 451/525 (86%), Gaps = 6/525 (1%) Strand=Plus/Plus Query 289 ATGTTTCTAGCTCACGTTACTCCCTTTTACCCGAAGCAACTCTCGGAGTTTCCAGCTCAA 348 |||||||| ||||| || ||||| ||||| ||||| || ||| | | |||||||||||| Sbjct 1 ATGTTTCTCGCTCATGTCACTCCGTTTTATCCGAACCAGCTCGCCGCTTTTCCAGCTCAA 60 Query 349 TTGACTGACTTACTCCGTACTTCTTGCTTAGCAATGCCCTCGGGTCTTCGAAACCATGTT 408 |||||||| ||||||||||| || ||| | |||||||| ||||| ||||| |||| ||| Sbjct 61 TTGACTGATTTACTCCGTACCTCATGCCTGGCAATGCCGTCGGGGCTTCGGTACCAAGTT 120 Query 409 GCACAAGCTCTGATTCTTCTAATGAATCGAAAGAGTCTTGTCATCGAGGATTTGCTGGCT 468 || ||| ||||||||||||| ||||||||||||||||||||||||||||||||| | ||| Sbjct 121 GCGCAATCTCTGATTCTTCTTATGAATCGAAAGAGTCTTGTCATCGAGGATTTGTTAGCT 180 Query 469 TTATTTCTGGATATTCAGACTCTTGGTGACAAAAACCTGCGAGCTCTTGCTTT-TGGTCA 527 | ||||| |||||||| ||||||||||| |||||| ||||| |||||||| | ||| Sbjct 181 CTGTTTCTAGATATTCAAACTCTTGGTGATAAAAACTTGCGAAAGCTTGCTTTCTC-TCA 239 Query 528 CATTGTTCAAACCATTCGTAAGATGAGTATCACTGATCCCAAG-CACAAATCACTTCAGA 586 |||||||||||||||||||| ||||||||||||||||| ||| |||||||| ||||| | Sbjct 240 TATTGTTCAAACCATTCGTAAAATGAGTATCACTGATCC-AAGGCACAAATCTCTTCACA 298 Query 587 AGATTGTGATCTCTATGTTAGAGCAAGAAGATGAAGCAAAGGCTAAGAGAGCACTTGCTA 646 ||||||| |||||||||| ||||||||||||||| | ||||||||||||||||||| || Sbjct 299 AGATTGTTTTCTCTATGTTGGAGCAAGAAGATGAAACCAAGGCTAAGAGAGCACTTGTTA 358 Query 647 CTCTCTGTGCGCTACACAAGAAAAA-GATATGGCTTGGTGATAAAAATGAAAGAGTTGCA 705 | || |||| ||| ||||||||||| | | ||| ||||||||||| |||| ||||| ||| Sbjct 359 CCCTTTGTGAGCTTCACAAGAAAAAAG-TCTGGTTTGGTGATAAACATGACAGAGTAGCA 417 Query 706 ATTGCGATTTGTGAAGCCTGCTTTCATTCTTCACCTAGGATAATGATCTCTGCTCTTCGA 765 ||||| ||||||||||||||||||||| ||||||||||||| | ||| ||| | ||||| Sbjct 418 ATTGCCATTTGTGAAGCCTGCTTTCATACTTCACCTAGGATCAGGATATCTTCCCTTCGG 477 Query 766 TTTCTTCTTGACTATGAGAACATTGACGATGATGACGATAGTGAT 810 |||||||||||||| || |||||| ||||||| || ||||||||| Sbjct 478 TTTCTTCTTGACTACGACAACATTAACGATGAGGATGATAGTGAT 522 Score = 542 bits (293), Expect = 8e-153 Identities = 474/556 (85%), Gaps = 33/556 (6%) Strand=Plus/Plus Query 1090 GAGACCAGGTTGATGATGATTAAAGTTATTGCTCGCACAATTGGTCTTCACAAGTTGCAT 1149 ||||||||||||||||| || ||||||||||| || |||||||||||||||||||||| | Sbjct 802 GAGACCAGGTTGATGATTATAAAAGTTATTGCACGAACAATTGGTCTTCACAAGTTGCTT 861 Query 1150 TTGCT-AAGTTTTTATTCTTTTCTTCAAAAC-TACGCT-ATGCCGCATGTAAAGGACATT 1206 || | || |||||| ||| ||||| || | || ||| | | | ||||||||||||| Sbjct 862 TTATTCAA-ATTTTATACTTATCTTC-AAGCGTATGCTAAGGATG-GTGTAAAGGACATT 918 Query 1207 ACACAAATACTTGCAGCAGCAGTTCAATCTTGCCATGATGGGGTTCCTTCTGATGCTGTG 1266 |||||||||||||||||||||||||| |||||||||||||||| ||||| ||||| ||| Sbjct 919 ACACAAATACTTGCAGCAGCAGTTCAGGCTTGCCATGATGGGGTACCTTCGGATGCCGTG 978 Query 1267 GAGCCACTGTTCAAGCAAATTGTGAATCAGTTTGTACACGA-CAAGTCACGTCCTGAGGC 1325 |||||||||||||||||||| |||||| ||||| ||||||| | ||| |||| ||||| Sbjct 979 GAGCCACTGTTCAAGCAAATAGTGAATAAGTTTTTACACGATCGC-TCAAGTCCGGAGGC 1037 Query 1326 TATTGCTGTCGGACTCAATGTGGTACGAGAAATGTGCCTGAGGATTCACGACTTGATGAC 1385 |||| |||||| ||||||||||||||||||||||| ||| ||||||| ||| |||||||| Sbjct 1038 TATTCCTGTCGCACTCAATGTGGTACGAGAAATGTTCCTTAGGATTCCCGAGTTGATGAC 1097 Query 1386 AGAAGAGTTGCTGCAAGATCTTGCTCTGTATAAAA---A------GT-CC---C--AT-G 1429 |||||| |||||||| |||||||||| |||||||| | || || | || | Sbjct 1098 AGAAGACTTGCTGCATGATCTTGCTCAGTATAAAACGGATAAAAAGTACCGTACCCATAG 1157 Query 1430 AAAAAGCCATCTCAGCAGCAGCT-CGTTCCCTCATAGCATTGTTCAGAGAGATCAACCCT 1488 |||| ||||||||||||||| || | |||||||||||||||||||||||||||||||||| Sbjct 1158 AAAA-GCCATCTCAGCAGCATCTGC-TTCCCTCATAGCATTGTTCAGAGAGATCAACCCT 1215 Query 1489 TCGCTTCTGGTGAAAAAAGATCGTGGCCGTCCTGGAGCTACCATTGCAAAACCTAAACAA 1548 | ||| || ||||||||||| |||||||||||||||| | ||||||| | ||||||| || Sbjct 1216 TTGCTACTAGTGAAAAAAGACCGTGGCCGTCCTGGAGGTCCCATTGCCAGACCTAAA-AA 1274 Query 1549 -TATGGGGA-GTCTAATGTCTTCAGCAATGTTCCCAATGTTGAATTATTGCAAGAAAGTG 1606 ||||| || ||| ||||||||||||||||||||||||||||| |||||||||||||||| Sbjct 1275 GTATGGAGAAGTC-AATGTCTTCAGCAATGTTCCCAATGTTGATTTATTGCAAGAAAGTG 1333 Query 1607 ATAATGA-GA-GTGGC 1620 || |||| || ||||| Sbjct 1334 ATGATGATGAAGTGGC 1349 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 131136389002 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5