BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg471498
Length=1119
Score E
Sequences producing significant alignments: (Bits) Value
AT1G13430.1 | Symbols: ATST4C, ST4C | sulfotransferase 4C | chr... 1500 0.0
AT1G13420.1 | Symbols: ATST4B, ST4B | sulfotransferase 4B | chr... 641 0.0
AT2G14920.1 | Symbols: ATST4A, ST4A | sulfotransferase 4A | chr... 634 0.0
> AT1G13430.1 | Symbols: ATST4C, ST4C | sulfotransferase 4C | chr1:4606500-4607747
FORWARD LENGTH=1248
Length=1248
Score = 1500 bits (812), Expect = 0.0
Identities = 1009/1102 (92%), Gaps = 21/1102 (2%)
Strand=Plus/Plus
Query 1 AACAAAACAACAGCCaaaaaaaaTGGATGAAAAAGATATTCCAAGGAACTTGAGGgaaga 60
|||||||||| | ||||||||||||||||| |||||||||| ||||||||||||||||||
Sbjct 9 AACAAAACAAGAACCAAAAAAAATGGATGAGAAAGATATTCTAAGGAACTTGAGGGAAGA 68
Query 61 agaagaagaagaagaagaaAACCTAAGTGAAGAAACCAAAAGTTTGATCTCTTCACTTCC 120
||||||||||||||||||||| | ||| ||||||||||||| ||||||||||||||||||
Sbjct 69 AGAAGAAGAAGAAGAAGAAAATCAAAGCGAAGAAACCAAAATTTTGATCTCTTCACTTCC 128
Query 121 TTGGGAGATAGATTACCTTGGGAACAAGCTGTTCAAGTACCAAGGATATTGGTACTACGA 180
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 129 TTGGGAGATAGATTACCTTGGGAACAAGCTTTTCAAGTACCAAGGATATTGGTACTACGA 188
Query 181 AGACATTCTCCAAGCAATCCCCAATTTCCACAAGAGTTTTCAACCACAAGAAACCGATAT 240
|||| |||||||| ||||||||||| | ||| ||||||||| |||||||||||||||||
Sbjct 189 AGACGTTCTCCAATCAATCCCCAATATACACTCGAGTTTTCAGCCACAAGAAACCGATAT 248
Query 241 AATTGTTGCTGCTTTCCCCAAATCGGGCACGACTTGGCTCAAGGCACTCACATTTGCACT 300
| |||||||| ||||| |||||||||||||||||||||||| |||||||||||||||||
Sbjct 249 AGTTGTTGCTTCTTTCTACAAATCGGGCACGACTTGGCTCAAAGCACTCACATTTGCACT 308
Query 301 CATTCAACGATCAAAACATC-CCTTAGAAGAAGATAATCATCCTCTGCTATCTCATAATC 359
| |||||||||||||||| | | |||||||| || |||||||||||||||||||||| |
Sbjct 309 CGTTCAACGATCAAAACA-CTCGTTAGAAGATCATCATCATCCTCTGCTATCTCATAACC 367
Query 360 CTCATGAGATAGTGCCGTACCTCGAGCTCGATCTGTATCTCAAAAGCTCAAAACCGGACT 419
||||||||||||| |||||||||||||| |||||||||||||| ||||||||||||||||
Sbjct 368 CTCATGAGATAGTACCGTACCTCGAGCTAGATCTGTATCTCAACAGCTCAAAACCGGACT 427
Query 420 TGACCAAGTTC---T--T-ATCATCATCAT--T-ATCTCCGAGATTGTTCTCAACTCACA 470
||||||||||| | | ||||||||||| | |||||||||||||||||||||||| |
Sbjct 428 TGACCAAGTTCTTATCATCATCATCATCATCATCATCTCCGAGATTGTTCTCAACTCATA 487
Query 471 TGTCGTTGGATGCGCTTAAAGC-ACCCTTGAAGGAGTCAT-CTTGCAAGATCGTGTACGT 528
|||| ||||| ||||||||| | |||||||||| |||| | |||||||| | ||||||||
Sbjct 488 TGTCCTTGGACGCGCTTAAA-CTACCCTTGAAGAAGTC-TCCTTGCAAGGTAGTGTACGT 545
Query 529 GTGCAGGAACGTGAAAGACGTGTTGGTGTCTCTTTGGCATTTCCTCAATGCCAACAAGGG 588
|||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||
Sbjct 546 GTGCAGGAACGTGAAAGACGTGTTGGTGTCACTTTGGTGTTTCCTCAATGCCAACAAGGG 605
Query 589 AGTAGAATGGGGAGATTTCAGCCAAAGCGAAAAGATCAGTGGAGTGGATG-ATCACTCTT 647
|||||||||||||||||| ||||||| |||||||||| | ||| ||| | || | ||||
Sbjct 606 AGTAGAATGGGGAGATTTTAGCCAAAATGAAAAGATCATTCGAGCGGA-GAATTATTCTT 664
Query 648 TCGAGGCTATGTTTGAGTCATTCTGCAACGGAGTTACCTTATACGGTCCC-TTTGAGGAC 706
|| ||||||| ||||||||||||||||||||||||||| || |||||||| |||| ||||
Sbjct 665 TCAAGGCTATATTTGAGTCATTCTGCAACGGAGTTACCCTACACGGTCCCTTTTG-GGAC 723
Query 707 CATGCTTTGAGCTATTGGCAAGGCAGCTTGGAAGATCCAAAGCATGTTCTTTTCATGATG 766
||||| ||||||||||| |||||||||||||||||| |||||| |||||||||||| |
Sbjct 724 CATGCACAGAGCTATTGGCGAGGCAGCTTGGAAGATCCTAAGCATTTTCTTTTCATGAGG 783
Query 767 TACGAGGAGTTCAAAGCGGAGCCTCGTACTCAGGTTAAGAGACTTGCGGAGTTCTTGGAT 826
||||||||||| ||||||||||||||||||||||| ||||||||||| ||||||||||||
Sbjct 784 TACGAGGAGTTGAAAGCGGAGCCTCGTACTCAGGTCAAGAGACTTGCAGAGTTCTTGGAT 843
Query 827 TGTCCATTCACTAAGGAAGAGGAAGATAGCGGATCTGTAGATAAGATCTTGGAACTTTGC 886
||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||
Sbjct 844 TGTCCATTCACTAAGGAAGAGGAAGATAGCGGAACTGTAGACAAGATCTTGGAACTTTGC 903
Query 887 TCTCTAAGTAATCTAAGCAGTTTGGAGATCAACAAAACTGGAACGTTAGATGGAGTAGAT 946
|||||||||||| ||||||||||||||||||||||||||||| | || | ||||||||||
Sbjct 904 TCTCTAAGTAATTTAAGCAGTTTGGAGATCAACAAAACTGGATCCTTGGGTGGAGTAGAT 963
Query 947 TTCAAGACTTATTTCCGTAAAGGACAAGTTGGTGACTGGAAGAGTTATATGACCCCTGAA 1006
| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 964 TACAAGACTTATTTCCGTAAAGGACAAGTTGGTGACTGGAAGAGTTATATGACCTCTGAA 1023
Query 1007 ATGGTAAACAAAATCGATATGATCATCGAGGAGAAACTCAAAGGTTCCGGTTTGAAATTC 1066
|||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 1024 ATGGTAAATAAAATCGATATGATCGTCGAGGAGAAACTCAAAGGTTCCGGTTTGAAATTC 1083
Query 1067 TAGAATTATG--TGTGCTTTGT 1086
|||||||||| ||||||||||
Sbjct 1084 TAGAATTATGCGTGTGCTTTGT 1105
> AT1G13420.1 | Symbols: ATST4B, ST4B | sulfotransferase 4B | chr1:4604841-4606053
FORWARD LENGTH=1213
Length=1213
Score = 641 bits (347), Expect = 0.0
Identities = 495/564 (88%), Gaps = 20/564 (4%)
Strand=Plus/Plus
Query 7 ACAACAGC-Caaa-aaaaaTGGATGAAAAAGATATTCCAAGGAACTTGAGGgaagaagaa 64
|||| ||| ||| |||||||| ||| |||||||||||||||||||||| ||||||||||
Sbjct 13 ACAAAAGCAAAAACAAAAATGGGTGAGAAAGATATTCCAAGGAACTTGAAGGAAGAAGAA 72
Query 65 gaagaagaagaagaaAACCTAAGTGAAGAAACCAAAAGTTTGATCTCTTCACTTCCTTGG 124
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 73 GAAGAAGAAGAAGAAAACCAAAGTGAAGAAACCAAAAGTTTGATCTCTTCACTTCCTTCA 132
Query 125 GAGATAGATTAC-CTTGGGAACAAGCTGTTCAAGTACCAAGGATATTGGTACTACGAAGA 183
|| ||||||| | | |||| |||| ||| |||||||||||||| ||||||| || ||||
Sbjct 133 GACATAGATTGCTCA-GGGACCAAGTTGTACAAGTACCAAGGATGTTGGTACGACAAAGA 191
Query 184 CATTCTCCAAGCAATCCCCAATTTCCACAAGAGTTTTCAACCACAAGAAACCGATATAAT 243
|||||||||||||||| ||||||| |||| | ||||| ||||||||||| ||||||||
Sbjct 192 TATTCTCCAAGCAATCCTCAATTTCAACAAAAACTTTCAGCCACAAGAAACGGATATAAT 251
Query 244 TGTTGCTGCTTTCCCCAAATCGGGCACGACTTGGCTCAAGGCACTCACATTTGCACTCAT 303
||||||| |||||||||||||||| |||||||||||||||||||||||||| ||||||
Sbjct 252 TGTTGCTTCTTTCCCCAAATCGGGTACGACTTGGCTCAAGGCACTCACATTCGCACTCGC 311
Query 304 TCAACGATCAAAACATCCCTTAGAAGAAGATAATCATCCTCTGCTATCTCATAATCCTCA 363
||| |||||||||| | ||| | || | | ||||||||||||| |||||||||||||
Sbjct 312 GCAAAGATCAAAACA-CACTTC-A-GAC-A-A-TCATCCTCTGCTAACTCATAATCCTCA 365
Query 364 TGAGATAGTGCCGTACCTCGAGCTCGATCTGTATCTCAAAAGCTCAAAACCGGACTTGAC 423
|||| ||||||||||||||||||||||||| |||||||||||||| |||||||| |||||
Sbjct 366 TGAGCTAGTGCCGTACCTCGAGCTCGATCTTTATCTCAAAAGCTCGAAACCGGATTTGAC 425
Query 424 CAAGTT-CTTATCATCATCATTATCTCCGAGATTGTTCTCAACTCACATGTCGTTGGATG 482
|||||| | ||||||||| ||||||||||||||||||| |||||||| || ||||
Sbjct 426 CAAGTTGC----CATCATCAT---CTCCGAGATTGTTCTCAACCCACATGTCCTTTGATG 478
Query 483 CGCTTAAAGCACCCTTGAAGGAGTCATC-TTGCAAGATCGTGTACGTGTGCAGGAACGTG 541
||||||||| ||| ||||| ||||| || |||||||||||||||||||||||||||||||
Sbjct 479 CGCTTAAAGTACCGTTGAAAGAGTC-TCCTTGCAAGATCGTGTACGTGTGCAGGAACGTG 537
Query 542 AAAGACGTGTTGGTGTCTCTTTGG 565
|||||||| ||||| || ||||||
Sbjct 538 AAAGACGTATTGGTATCACTTTGG 561
> AT2G14920.1 | Symbols: ATST4A, ST4A | sulfotransferase 4A | chr2:6418199-6419236
FORWARD LENGTH=1002
Length=1002
Score = 634 bits (343), Expect = 0.0
Identities = 427/468 (91%), Gaps = 4/468 (1%)
Strand=Plus/Plus
Query 603 ATTTCAGCCAAAGCGAAAAGATCAGTGGAGTGGATGATCACTCTTTCGAGGCTATGTTTG 662
|||| || |||||| ||||||||| | ||| ||| ||| ||||||| |||||||| ||||
Sbjct 536 ATTTTAGGCAAAGCAAAAAGATCACTCGAGCGGAGGATTACTCTTTGGAGGCTATATTTG 595
Query 663 AGTCATTCTGCAACGGAGTTACCTTATACGGTCCC-TTTGAGGACCATGCTTTGAGCTAT 721
||||||||||||||||||||||| || |||||||| |||| ||||||||| ||||||||
Sbjct 596 AGTCATTCTGCAACGGAGTTACCCTACACGGTCCCTTTTG-GGACCATGCACTGAGCTAT 654
Query 722 TGGCAAGGCAGCTTGGAAGATCCAAAGCATGTTCTTTTCATGATGTACGAGGAGTTCAAA 781
|||| |||||||||||||||||| |||||| |||||||||||| ||||||||| || |||
Sbjct 655 TGGCGAGGCAGCTTGGAAGATCCCAAGCATTTTCTTTTCATGAGGTACGAGGATTTGAAA 714
Query 782 GCGGAGCCTCGTACTCAGGTTAAGAGACTTGCGGAGTTCTTGGATTGTCCATTCACTAAG 841
|||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||
Sbjct 715 GCGGAGCCTCGTACTCAGGTCAAGAGACTTGCAGAGTTCTTGGATTGTCCATTCACTAAG 774
Query 842 GAAGAGGAAGATAGCGGATCTGTAGATAAGATCTTGGAACTTTGCTCTCTAAGTAATCTA 901
|||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||
Sbjct 775 GAAGAGGAAGATAGCGGATCTGTAGACAAGATCTTGGAACTTTGCTCTTTAAGTAATCTA 834
Query 902 AGCAGTTTGGAGATCAACAAAACTGGAACGTTAGA-TGGAGTAGATTTCAAGACTTATTT 960
|| ||| |||||||||||||||| ||||| | || | |||| |||||||||| ||||||
Sbjct 835 AGAAGTGTGGAGATCAACAAAACCAGAACG-TCGAGTAGAGTGGATTTCAAGAGTTATTT 893
Query 961 CCGTAAAGGACAAGTTGGTGACTGGAAGAGTTATATGACCCCTGAAATGGTAAACAAAAT 1020
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 894 CCGTAAAGGACAAGTTGGTGACTGGAAGAGTTATATGACCCCTGAAATGGTAGACAAAAT 953
Query 1021 CGATATGATCATCGAGGAGAAACTCAAAGGTTCCGGTTTGAAATTCTA 1068
|||||||| || ||||| |||||||||||||||||||||||||||||
Sbjct 954 TGATATGATTATAGAGGAAAAACTCAAAGGTTCCGGTTTGAAATTCTA 1001
Score = 604 bits (327), Expect = 4e-172
Identities = 455/514 (89%), Gaps = 19/514 (4%)
Strand=Plus/Plus
Query 68 gaagaagaag-aaAACCTAAGTGAAGAAACCAAAAGTT-TGATCTCTTCACTTCCTTGGG 125
|||||||||| |||||| |||||||||||||||| || |||| ||||||||||||||||
Sbjct 34 GAAGAAGAAGAAAAACC-GAGTGAAGAAACCAAAA-TTCTGATATCTTCACTTCCTTGGG 91
Query 126 AGATAGATTACCTTGGGAACAAGCTGTTCAAGTACCAAGGATATTGGTACTA-CGAAGAC 184
||||||||||||||||||||||||||||||| ||| |||||||||||||| | |||||||
Sbjct 92 AGATAGATTACCTTGGGAACAAGCTGTTCAACTACGAAGGATATTGGTAC-AGCGAAGAC 150
Query 185 ATTCTCCAAGCAATCCCCAATTTCCACAA-GAGTTTTCAACCACAAGAAACCGATATAAT 243
||||||||| ||||||||||| | |||| | ||||||| ||||||||||| ||||||||
Sbjct 151 ATTCTCCAATCAATCCCCAATATACACACTG-GTTTTCAGCCACAAGAAACTGATATAAT 209
Query 244 TGTTGCTGCTTTCCCCAAATCGGGCACGACTTGGCTCAAGGCACTCACATTTGCACTCAT 303
| ||||| ||||| ||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 210 TCTTGCTTCTTTCTACAAATCGGGCACGACTTGGCTCAAGGCACTCACATTTGCACTCGT 269
Query 304 TCAACGATCAAAACATCCCTTAG-AAGAAGAT-AATCATCCTCTGCTATC-TCATAATCC 360
||||||||| ||||| | ||| | |||| || || |||||| ||||| | |||||||||
Sbjct 270 TCAACGATCTAAACA-CTCTTTGGAAGATCATCAA-CATCCTTTGCTA-CATCATAATCC 326
Query 361 TCATGAGATAGTGCCGTACCTCGAGCTCGATCTGTATCTCAAAAGCTCAAAACCGGACTT 420
||||||||||||||| | || ||||| ||||||||||| ||||||||||||||||||||
Sbjct 327 TCATGAGATAGTGCCCAATCTTGAGCTAGATCTGTATCTTAAAAGCTCAAAACCGGACTT 386
Query 421 GACCAAGTTCTTATCATCATCAT--T-ATCTCCGAGATTGTTCTCAACTCACATGTCGTT 477
||||||||||||||||||||||| | |||||| |||||||||||||||||||||||| |
Sbjct 387 GACCAAGTTCTTATCATCATCATCATCATCTCCAAGATTGTTCTCAACTCACATGTCGCT 446
Query 478 GGATGCGCTTAAAGCACCCTTGAAGGAGTCATCTT-GCAAGATCGTGTACGTGTGCAGGA 536
||| ||||| ||| ||||||||||||| | ||| |||||||||||||||| |||||||
Sbjct 447 GGACCCGCTTCAAGTACCCTTGAAGGAGA-ACCTTTGCAAGATCGTGTACGTTTGCAGGA 505
Query 537 ACGTGAAAGACGTGTTGGTGTCTCTTTGGCATTT 570
|||||||||||||| ||||||| ||||| ||||
Sbjct 506 ACGTGAAAGACGTGATGGTGTCAGTTTGGTATTT 539
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 54869195685
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5