BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg471513
Length=1249
Score E
Sequences producing significant alignments: (Bits) Value
AT1G13540.1 | Symbols: | Protein of unknown function (DUF1262)... 1799 0.0
AT1G13510.1 | Symbols: | Protein of unknown function (DUF1262)... 1315 0.0
AT1G13530.1 | Symbols: | Protein of unknown function (DUF1262)... 239 5e-62
AT1G13490.1 | Symbols: | Protein of unknown function (DUF1262)... 152 7e-36
> AT1G13540.1 | Symbols: | Protein of unknown function (DUF1262)
| chr1:4635463-4636805 REVERSE LENGTH=1254
Length=1254
Score = 1799 bits (974), Expect = 0.0
Identities = 1163/1255 (93%), Gaps = 10/1255 (1%)
Strand=Plus/Plus
Query 1 AAGTCACCTTGTCAGTTGCTCTTCTACAGAGTTGTTTAGTCTATAATATAGGATCAAGTT 60
|||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||
Sbjct 4 AAGTCACCTTGTCAGTTGCTGTTCTACAGAGTTGTTTACTCTATAATATAGGATCAAGTT 63
Query 61 TCTCTCCAAGTCCCAAACTCGATTTAGTG-AA-AATGTACATCACAAGGCGTTTGTCTGA 118
| ||||||||||| ||||||||||||||| || |||||||||||||||| |||| || ||
Sbjct 64 TTTCTCCAAGTCCAAAACTCGATTTAGTGAAACAATGTACATCACAAGGAGTTTCTCAGA 123
Query 119 GTATCGGAGGAATCCAGCAGAGCTAACACAGCCTCCTCCTGAGGGTCCCAACTCTGGAAT 178
||| |||||||||||||||||||||||||||||||||||||||||||| || ||||||||
Sbjct 124 GTACCGGAGGAATCCAGCAGAGCTAACACAGCCTCCTCCTGAGGGTCCAAATTCTGGAAT 183
Query 179 TTTGGTAATCCAAGACCAACACTCACAGACACGGGTTACATGTTGCTTCAGCTCGTGGTT 238
|||||||||||||||||||||||||| |||||||| ||||| ||||||| ||||||||||
Sbjct 184 TTTGGTAATCCAAGACCAACACTCACGGACACGGGCTACATCTTGCTTCGGCTCGTGGTT 243
Query 239 GGTGGTGGATTCTTCTCTACGTGGTTTGCCATTGCCGCAAAATCTTAAGCTAGCAGTCAC 298
||| ||||| ||||||||| |||||||||||||||| |||||||||||||||||||||||
Sbjct 244 GGTTGTGGACTCTTCTCTAAGTGGTTTGCCATTGCCCCAAAATCTTAAGCTAGCAGTCAC 303
Query 299 ATTCAATATCGGAGGAGATGACAGTACTCGTGACCCAATTGTGTTCATTCCTGTTCTTGA 358
||||||||| ||||| |||||||| |||||||||||| ||||||||||||||||||||||
Sbjct 304 ATTCAATATTGGAGGTGATGACAGCACTCGTGACCCAGTTGTGTTCATTCCTGTTCTTGA 363
Query 359 TAAGCCTCTATCTTCAAACTGTTATTACGCTATCAAACGACATGGGAAACATTCAGGAGA 418
||||||||||||||||||||||||||||||||| ||||| |||||||| |||||||| ||
Sbjct 364 TAAGCCTCTATCTTCAAACTGTTATTACGCTATTAAACGGCATGGGAAGCATTCAGGGGA 423
Query 419 AGCGTCTGGTAGTGCCAAGGAGGAAGATAAAGTCTCCTGCTGCTTTTGTAT-TAGGCAAG 477
||||||||| ||||| || ||||| |||| |||||||||||||||||| | ||| |
Sbjct 424 AGCGTCTGGAAGTGCAAAAGAGGACGATATAGTCTCCTGCTGCTTTTG-CTCTAGTTTTG 482
Query 478 TTGCTGAAGCTAAACCAAAACAGCTAGATCCTTTTGACATATACCAACAATTTGAGATCC 537
|| ||||||| |||||||||||| |||||||||||||||| ||||||||||| ||||||
Sbjct 483 TTCCTGAAGCCAAACCAAAACAGTTAGATCCTTTTGACATGTACCAACAATTCAAGATCC 542
Query 538 TTCAAAAGAAGCCATCCTCGCGTTGTTACTACGCAACATCTGTCGCTCCTGACGGGGTCC 597
||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 543 ATCAAAAGGAGCCTTCCTCGCGTTGTTACTACGCAACATCTGTCGCTCCTGACGGGGTCC 602
Query 598 CACCATGGTTTCTCAAGAGAAAGGAGTGGACGGTTGAATGCTTGAGGTCCCAAGACTTTG 657
||||||||||||| | || ||| |||||||||||||||| || ||||| |||||||||||
Sbjct 603 CACCATGGTTTCTGAGGAAAAAAGAGTGGACGGTTGAATACTCGAGGTTCCAAGACTTTG 662
Query 658 AACTGAGAGATGATGCAAAAGGACTCAACACAGAGCTTCGTGCCAAGCTTCC-CGGTCTT 716
||||||||||||||||||||||||||| ||||||||||||| | ||||||| | ||||
Sbjct 663 AACTGAGAGATGATGCAAAAGGACTCATCACAGAGCTTCGTACTGAGCTTCCTC-TTCTT 721
Query 717 GGTATGAGCACAGTGGTTGGGAAGTGGTATGTCCCTTTCATATTCGTGAAAGAACGAGAC 776
||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 722 GGTATGAGCACTGTGGTTGGGAAGTGGTATGTCCCTTTCATATTCGTGAAAGAAAGAGAG 781
Query 777 GCAAAGGATCAGGTCAAGAATTCGGTGTATTACAGCATGACTCTCGAACAAA-ATTGGAA 835
| |||||||||| ||||||||||| ||||||||||||||||||| ||||||| | |||||
Sbjct 782 GTAAAGGATCAGATCAAGAATTCGATGTATTACAGCATGACTCTTGAACAAAGA-TGGAA 840
Query 836 AGAGGTTTTCTCTTATGAGAACGATAAACGCGAAAACCGTGATGTTGTAGTTGATGTAGA 895
|||| |||| ||| |||||||||| ||| |||| |||||||||||||| |||||||||||
Sbjct 841 AGAGCTTTTTTCTGATGAGAACGACAAAAGCGAGAACCGTGATGTTGTCGTTGATGTAGA 900
Query 896 AATTGAAACAGAAGTTGTTAAGCTTGAGGGACAAGA-GATTGCAAGAGGTGTTGAAGCAA 954
| | |||||||||||||||||||||||||||||| | ||||| ||||||| | |||||||
Sbjct 901 AGTAGAAACAGAAGTTGTTAAGCTTGAGGGACAA-ATGATTGAAAGAGGTCTGGAAGCAA 959
Query 955 ATGGGTTTGTCTGGTTTGGGGTTGGAGaaaaaaaGATCGGTTTAGGATCGGTTGTTGTTG 1014
|||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||
Sbjct 960 ATGGGTTTGTCTGGTTTGGGGTTGGAGACAAAAAGATCGGTTTAGGATCAGTTGTTGTTG 1019
Query 1015 AGAGGATGAAATGGGAAGAAGAGAGATTTGGGTGGACAGGCAAAGGCGACAAGGAGCGAT 1074
|||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||
Sbjct 1020 AGAGGATGAAATGGGAAGAAGAGAGATTCGGGTGGACAGGCAAAGGCGACAATGAGCGAT 1079
Query 1075 CAATGACAGTTAAGAGATTGGAGAAATCAACAGATGGTAGCCTTTGGAAGCGTTATCATT 1134
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 1080 CAATGACAGTTAAGAGATTGGAGAAATCAACAGATGGTAGCCTTTGGAAGCATTATCATT 1139
Query 1135 GTTATGTTCTGATAGAGAGCTTTGTCTTGAAGAGAATGGATGAGAGTTTGGTCTTAACAT 1194
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1140 GTTATGTTCTGATAGAGAGCTTTGTCTTGAAGAGAATGGATGAGAGTTTGGTCTTAACAT 1199
Query 1195 ATGAGTTTACACATGTCGATAAGCTCAAAACCAAATGGGATTAAGCTTATCACGC 1249
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 1200 ATGAGTTTACACATGTAGATAAGCTCAAAACCAAATGGGATTAAGCTTATCACGC 1254
> AT1G13510.1 | Symbols: | Protein of unknown function (DUF1262)
| chr1:4629203-4630821 REVERSE LENGTH=1533
Length=1533
Score = 1315 bits (712), Expect = 0.0
Identities = 1025/1175 (87%), Gaps = 25/1175 (2%)
Strand=Plus/Plus
Query 86 AGTGAAAATGTACATCACAAGGCGTTTGTCTGAGTATCGGAGGAATCCAGCAGAGCTAAC 145
|||| ||||||| | || ||| ||||||| ||||| | ||| ||||||||||||||||
Sbjct 128 AGTGGAAATGTATGTTACGAGGTGTTTGTCAGAGTACCAGAGAAATCCAGCAGAGCTAAG 187
Query 146 ACAGCCTCCTCCTGAGGGTCCCAACTCTGGAATTTTGGTAATCCAAGACCAACACTCACA 205
||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||
Sbjct 188 ACAGCCTCCTCCTGAGGGTCCAAACTCTGGAATTTTGGTAATACAAGACCAACACTCACA 247
Query 206 GACACGGGTTACATGTTGCTTCAGCTCGTGGTTGGTGGTGGATTCTTCTCTACGTGGTTT 265
||||| | | ||||||||||| ||| ||| ||||| ||||| || | |||| |||||||
Sbjct 248 GACAC--G-TCCATGTTGCTTCGGCTTGTGTTTGGTTGTGGACTCGTATCTAAGTGGTTT 304
Query 266 GCCATTGCCGCAAAATCTTAAGCTAGCAGTCACATTCAATATC-GGAGGAGATGACAG-T 323
||| ||||||||||||||||||||||||| || ||||||| | |||| ||||||| | |
Sbjct 305 GCCCTTGCCGCAAAATCTTAAGCTAGCAGCCAGATTCAAT-GCTGGAGAAGATGAC-GCT 362
Query 324 ACTCGTGACCCAATTGTGTTCATTCCTGTTCTTGATAAGCCTCTATCTTCAAACTGTTAT 383
||| |||||||| |||| |||||||||||||| |||||||||||||||||||||||||
Sbjct 363 ACTTGTGACCCAGTTGTCTTCATTCCTGTTCTCAATAAGCCTCTATCTTCAAACTGTTAC 422
Query 384 TACGCTATCAAACGACAT-GGGAAACATTCAGGAGAAGCGTCTGGTAGTGCCAAGGAGGA 442
||||||||||||||| | ||||| ||||||||||||||| ||| ||||| || |||||
Sbjct 423 TACGCTATCAAACGA-GTGGGGAAGCATTCAGGAGAAGCGCCTGCTAGTGGGAAAGAGGA 481
Query 443 AGATAAAGTCTCC-TGCTGCTTTTGTAT-TAGGCAAGTTGCTGAAGCTAAACCAAAACAG 500
||| | |||| || ||||||||||| | ||| | ||| ||||||| ||||||||||||
Sbjct 482 AGACAGAGTC-CCGTGCTGCTTTTG-CTCTAGTTATGTTCCTGAAGCCAAACCAAAACAG 539
Query 501 CTAGATCCTTTTGACATATACCAACAATTTGA-GATCCTTCAAAAGAAGCCATCCTCGCG 559
|||||||||| |||||| || |||||| || | ||||| |||||||| |||||||||||
Sbjct 540 CTAGATCCTTATGACATGTATCAACAA-TTCATGATCCACCAAAAGAAACCATCCTCGCG 598
Query 560 TTGTTACTACGCAACATCTGTCGCTCCTGACGGGGTCCCACCATGGTTTCTCAAGAGAAA 619
| |||||||| |||||||| || |||||||| ||| |||||||||| || |||| |||
Sbjct 599 CTACTACTACGCGACATCTGTTGCGCCTGACGGAGTCTCACCATGGTTCCTTAAGAAAAA 658
Query 620 GGAGTGGACGGTTGAATGCTTGAGGTCCCAAGACTTTGAACTGAGAGATGATGCAAAAGG 679
||||||| || |||| || |||| ||||||||||||||||| |||||||||||||||
Sbjct 659 TAAGTGGACAGTCGAATACTCAAGGTTCCAAGACTTTGAACTGAAAGATGATGCAAAAGG 718
Query 680 ACTCAACACAGAGCTTCGTGCCAAGCTTCCCGGTCTTGGTATGAGCACAGTGGTTGGGAA 739
||| ||||||||||||||| || |||||||||||||||||||||| |||||||||||
Sbjct 719 ACTAAACACAGAGCTTCGTACCGAGCTTCCCGGTCTTGGTATGAGTGTTGTGGTTGGGAA 778
Query 740 GTGGTATGTCCCTTTCATATTCGTGAAAGAACGAGACGCAAAGGATCAGGTCAAGA-ATT 798
|||||| |||||||| ||||| ||||| ||| |||||| | |||||||| |||||| | |
Sbjct 779 GTGGTACGTCCCTTTTATATTTGTGAAGGAAAGAGACGTAGAGGATCAGATCAAGAGA-T 837
Query 799 CGGTGTATTACAGCATGACTCTCGAACAAA-ATTGGAAAGAGGTTTTCTCTTATGAGAAC 857
|| |||| |||||||||||||| ||||||| | ||| |||| |||||||||||||||||
Sbjct 838 CGATGTACTACAGCATGACTCTTGAACAAAGA-TGGGAAGAAGTTTTCTCTTATGAGAAG 896
Query 858 GATAAACG-CGAAAACCGTGATGTTGTAGTTGATGTAGAAATT-GAAACAGAAGTTGTTA 915
|||||| | || |||| ||||||| |||||||||||| | || || || ||||||||||
Sbjct 897 GATAAAAGCCG-AAACTATGATGTTTTAGTTGATGTAG-AGTTAGATACTGAAGTTGTTA 954
Query 916 AGCTTGAGGGACAAGAGATTGCAAGAGGTGTTGAAGCAAATGGGTTTGTCTGGTTTGGGG 975
|| |||| |||||||||||| |||||||||| ||||||||||||||||||||||||| ||
Sbjct 955 AGGTTGATGGACAAGAGATTTCAAGAGGTGTGGAAGCAAATGGGTTTGTCTGGTTTGCGG 1014
Query 976 TTGGAGaaaaaaaGATCGGTTTAGGATCGGTTGTTGTTGAGAGGATGAAATGGGAAGAAG 1035
||||||| |||||||| ||||||||||| |||||||||||||||||||||||||||||||
Sbjct 1015 TTGGAGACAAAAAGATTGGTTTAGGATCAGTTGTTGTTGAGAGGATGAAATGGGAAGAAG 1074
Query 1036 AGAGATTTGGGTGGACAGGCAAAGGCGACAAGGAGCGATCAATGACAGTTAAGAGATTGG 1095
||||||| |||||||| |||||||||||||| |||||||||||| || |||||||||||
Sbjct 1075 AGAGATTCGGGTGGACTGGCAAAGGCGACAATGAGCGATCAATGGTAGCTAAGAGATTGG 1134
Query 1096 AGAAATCAACAGATGGTAGCCTT-TGGAAGCGTTATCATTGTTATGTTCTGATAGAGAGC 1154
||||||||||||||||||| ||| | |||| | |||||||||||||||| ||||| ||
Sbjct 1135 AGAAATCAACAGATGGTAG-CTTGTTGAAGAATCGTCATTGTTATGTTCTGGTAGAGTGC 1193
Query 1155 TTTGTCTTGAAGAGAATGGATGAGAGTTTGGTCTTAACATATGAGTTTACACATGTCGAT 1214
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 1194 TTTGTCTTGAAGAGAATGGATGAGAGTTTGGTCTTAACATATGAGTTTACACACGTCGAT 1253
Query 1215 AAGCTCAAAACCAAATGGGATTAAGCTTATCACGC 1249
|||||||||||||||||||||||||||||||||||
Sbjct 1254 AAGCTCAAAACCAAATGGGATTAAGCTTATCACGC 1288
> AT1G13530.1 | Symbols: | Protein of unknown function (DUF1262)
| chr1:4633740-4635129 REVERSE LENGTH=1158
Length=1158
Score = 239 bits (129), Expect = 5e-62
Identities = 690/948 (73%), Gaps = 89/948 (9%)
Strand=Plus/Plus
Query 341 GTTCATTCCTGTTCTTGATAAGCCT-CTATCTT-CAAACTGTTATTACGCTATCAA-ACG 397
|||||| || |||||| | ||||| || |||| ||| || ||| |||| ||| || ||
Sbjct 246 GTTCATCCCCGTTCTTCACCAGCCTCCT-TCTTCCAATCT-TTACTACGTTAT-AAGGCG 302
Query 398 -ACATGGGAAACATTCAGGAGAAGCGTCTGGTAGTGCCAAGGAGGAAGATAAAGTCTCCT 456
| | ||||||||| |||||||||| | || |||||| || || || || ||||| || |
Sbjct 303 AAGA-GGGAAACATGCAGGAGAAGCATGTGTTAGTGCAAAAGAAGAGGACAAAGTTTCTT 361
Query 457 GCTGCTTTTGTATTAGGCAAGT-TGCTGAA-GCTAAACCAAAACAGCTAGATCCTTTTGA 514
| ||| ||||| ||| | || | || || |||| |||| | || |||||||||||
Sbjct 362 GTTGCCTTTGTTTTACTTATGTCT-CT-AATGCTACGCCAAGGCTTCTTGATCCTTTTGA 419
Query 515 CATATACCAACAATTTGAGATCCTTCAAAAGAAGC-CATC--CTCGC--GTTGTTACTAC 569
||||||||||||||||||||| | ||||| || || |||| ||||| ||| || | |
Sbjct 420 CATATACCAACAATTTGAGATACATCAAA-GAGGCTCATCAACTCGCAAGTT-TT--T-C 474
Query 570 GCAACATCTGTCGCTCCTGACGGGGTCCCACCAT-GGTTTCTCAAGAGAAA-GGAGTGGA 627
|| |||||||| ||| | || || | ||||| | |||| || | |||||| || ||||
Sbjct 475 GCTACATCTGTTGCTTCAGATGGAATACCACC-TCGGTTCCTGAGGAGAAAAGGC-TGGA 532
Query 628 CGGTTGAATGCT-TGAGGTCCCAAGACTTTGAACTGAGAGATGATGCAAAAGG---ACTC 683
| ||| | || || |||||||||| || ||| ||||||||||| || | |
Sbjct 533 CCGTTCCTTTCTCTGCT-TCCCAAGACTATGGTTTGATTGATGATGCAAAGGGTGTAGTT 591
Query 684 AACACAGAGCTTCG-TGCCAAGCTTCCCGGTCTT-GGTATGAGCACAGTGGTTGGGAAGT 741
| || |||| || | | |||||||| | || |||| ||| ||| ||||| || |
Sbjct 592 GATGCAAAGCTGCGCTATGA-GCTTCCCGAT-TTCGGTAAGAGTGTAGTAGTTGGAAAAT 649
Query 742 GGTATGTCCC-TTTCATATTCGTGAAAG-AACGAGACGC-AAAGGATCAGGTCAAGAATT 798
||||||| || ||| | || || |||| || |||| || |||| ||||| | ||||| |
Sbjct 650 GGTATGTTCCGTTTT-TGTTTGT-AAAGGAAGGAGATGCTAAAG-ATCAGATGAAGAAAT 706
Query 799 CGGTGTATTACAGCATGACTCT-CGAACAAA-ATTGGAAAGAGGTTTTCT-CTTATGAGA 855
|| ||||||| || ||||| || | | |||| ||| ||| |||||||||| || || |
Sbjct 707 CGATGTATTATAGTATGACACTTC-ACCAAAGATTTGAA-GAGGTTTTCTTCTGC-GAAA 763
Query 856 ACGATAAACGCGAAAACC-GTGATGTTGTAGTTGATGTAGAAATTGAAACAGAAGTTGTT 914
||| | | | |||| | || ||| |||||||||| || | ||||||||||| |||
Sbjct 764 ACGTTGA-CAATAAAAATTGCGAGGTTATAGTTGATGTGGAGGTAGAAACAGAAGTGGTT 822
Query 915 AAGCTTGA-GG-GACAA----G-A-GATTG-CAAGAGGTGTTGAAG-CAAATGG-GTTTG 963
|||||||| || || || | | || | ||| |||||| ||| || |||| ||| |
Sbjct 823 AAGCTTGAAGGAGAAAATATTGGAAGAGAGACAAAAGGTGT-GAATTCAGATGGAGTT-G 880
Query 964 TCTGGTTTGGGGT-TG-GAGaaaaa-aaGATCGGT-TTAGGATCGGTTGTTGTTG-AGAG 1018
|||||||||| || | |||| | ||||| ||| || || || || || ||| ||||
Sbjct 881 TCTGGTTTGGTGTCTCAGAGACTCAGAAGATAGGTATTGGG-TCTGTGGTC-TTGGAGAG 938
Query 1019 GATGAAATGGGAAGAAGAGAGATTTGGGTGGAC-AGGCAAAGGCGAC-AAGGAGCGATCA 1076
||||||||||||||||||||| ||||||||| | | | |||||| | || | | ||
Sbjct 939 GATGAAATGGGAAGAAGAGAGGTTTGGGTGGTCGAAG-AAAGGCAATGAACTAAAG-TCT 996
Query 1077 ATGACAGTTAAGAGAT-TGGAGAAATCA-ACAGATGGTAG-CCTT--TGGAAGCGTTATC 1131
| | || |||||||| || |||||| | || ||| | || |||||| |||||
Sbjct 997 A-G-CA-TTAAGAGAACTG-AGAAATTTGA-AGGCGGTGGACCACAATGGAAGAGTTATA 1051
Query 1132 -ATTGTTATGTTCTGATAGAGAGCTTTGT-CTTGAAGAGAA-TGGATGAGAGTTTGGTCT 1188
|| | ||||| ||| |||||| ||||| || ||||| || || ||| ||||||||| |
Sbjct 1052 GAT-GCTATGTACTGGTAGAGACCTTTGAACT-GAAGAAAACTG-ATGGGAGTTTGGTAT 1108
Query 1189 TAACATATGAGTTTACACATGTCGATAAGCTCAAAACCAAATGGGATT 1236
| || |||||||||| |||||| |||||| | || | || |||||||
Sbjct 1109 TGACGTATGAGTTTAGACATGTTGATAAGTTGAAGAGTAAGTGGGATT 1156
> AT1G13490.1 | Symbols: | Protein of unknown function (DUF1262)
| chr1:4624715-4626064 REVERSE LENGTH=1092
Length=1092
Score = 152 bits (82), Expect = 7e-36
Identities = 560/780 (72%), Gaps = 76/780 (10%)
Strand=Plus/Plus
Query 504 GATCCTTTTGACATATACCAACAATTTGAGATCCTTCAAA-AGAAGCCATCCT-CGC-GT 560
|||||||||||||||||||||||||||||||||| ||||| || | | ||| | | |
Sbjct 340 GATCCTTTTGACATATACCAACAATTTGAGATCCATCAAAGAGGATC-ATCAAAC-CAGA 397
Query 561 TGTTACTACGCAACATCTGTCGCTCCTGACGGGGTCCCACCATG-GTTTCTCAAGAGAAA 619
||| | || |||||||| ||| | || ||| | ||||| | ||| || | ||||||
Sbjct 398 AGTTTTTT-GCTACATCTGTTGCTTCAGAAGGGATACCACC-TCAGTTCCTGACGAGAAA 455
Query 620 GGAGT-GGACGGTTGAATGCTTGAGGTCCCAAGACTTTGAACTGAGAGATGATGCAAAAG 678
| || || || || | |||| | | |||| | || ||| ||||||||||| |
Sbjct 456 AG-GTTGGGTGGCTGCTTCCTTGCCTTTCGAAGAATATGGTTTGATTGATGATGCAAAGG 514
Query 679 G---ACTCAACACAGAGCTTCG-TGCCAAGCTTCCCGGTCTTGG-TATGAGCACAGTGGT 733
| | | | || ||||||| | | |||||| | | || | || |||| || ||
Sbjct 515 GTGTAGTTGATGCAAAGCTTCGCTATGA-GCTTCCTGAT-TTAGATAAGAGCGTTGTAGT 572
Query 734 TGGGAAGTGGTATGTCCCTTTCATATTCGTGAAAGAACGAG---ACGCAAAGGATCAGGT 790
|||||| |||||||| || ||| | || || || ||| | | | ||||| |||||| |
Sbjct 573 TGGGAAATGGTATGTTCCGTTCTTGTTTGTTAAGGAAGGTGGTGATGCAAACGATCAGAT 632
Query 791 CAAGAATTCGGTGTATTACAGCATGACTCT-CGAACAAA-ATTGGAAAGAGGTTTTCT-C 847
|| || || ||||||| || ||||| || | | |||| ||| ||| |||||||||| |
Sbjct 633 GAATAAATCAATGTATTATAGTATGACGCTTC-AGCAAAGATTTGAA-GAGGTTTTCTTC 690
Query 848 TTATGAGAACGATAAACG-CGA-AAACCGT--GATGTTGTAGTTGATGTAGAAATTGAAA 903
| ||| ||| || | | | |||| | || |||||||||||||| || | ||||
Sbjct 691 TG-TGAAAAC-ATTGGCAACAATAAACATTTTGAGGTTGTAGTTGATGTGGAGGTAGAAA 748
Query 904 CAGAAGTTGTTAAGCTTGA-GG-GACAAGA--G-ATT-G---CAAGAGGTGTTGAAG-CA 953
||||||| ||||||||||| || ||||||| | | | ||| |||||| ||| ||
Sbjct 749 CAGAAGTGGTTAAGCTTGAAGGAGACAAGATTGCAAGAGAGACAAAAGGTGT-GAACTCA 807
Query 954 AATGG-GTTTGTCTGGTTTGGGGT-T--GGAGaaaaa-aaGATCGGT-TTAGGATCGGTT 1007
|||| ||| || |||||| | || | || || | ||||| ||| || || || ||
Sbjct 808 GATGGAGTT-GTGTGGTTTAGTGTCTCAGG-GACTCAGAAGATTGGTCTTGGG-TCTGTG 864
Query 1008 GTTGTTG-AGAGGATGAAATGGGAAGAAGAGAGATTTGGGTGGACAG-GCAAAGGCGA-C 1064
|| ||| ||||||||||||||||||| ||||| ||||| ||| || | |||| || |
Sbjct 865 GTC-TTGGAGAGGATGAAATGGGAAGAGGAGAGGTTTGGATGGTCAAAG-AAAGATGAAC 922
Query 1065 AAGGAGCGATCAATGACAGTTAAGAGAT-TGGAGAAATCA-ACAGATGGTAG-CCT--TT 1119
| || | || | | || |||||||| || |||||| | || |||| | || ||
Sbjct 923 TA--AG-G-TCTA-G-CA-TTAAGAGAACTG-AGAAATTTGA-AGGTGGTGGACCACATT 973
Query 1120 GGAAGCGTTATC-ATTGTTATGTTCTGATAGAGAGCTTTGT-CTTGAAGAGAA-TGGATG 1176
||||| ||||| || | ||||| ||| |||||| ||||| || |||||||| || |||
Sbjct 974 GGAAGAGTTATAGAT-GCTATGTACTGGTAGAGACCTTTGAACT-GAAGAGAACTG-ATG 1030
Query 1177 AGAGTTTGGTCTTAACATATGAGTTTACACATGTCGATAAGCTCAAAACCAAATGGGATT 1236
||||||||| || ||||||||||||| |||||| |||||| | || | ||| |||||||
Sbjct 1031 GGAGTTTGGTATTGACATATGAGTTTAAACATGTTGATAAGTTGAAGAGCAAGTGGGATT 1090
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 61395266535
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5