BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg471515
Length=1612
Score E
Sequences producing significant alignments: (Bits) Value
AT1G13560.1 | Symbols: AAPT1, ATAAPT1 | aminoalcoholphosphotran... 2320 0.0
AT3G25585.2 | Symbols: AAPT2, ATAAPT2 | aminoalcoholphosphotran... 1103 0.0
> AT1G13560.1 | Symbols: AAPT1, ATAAPT1 | aminoalcoholphosphotransferase
1 | chr1:4638514-4642104 REVERSE LENGTH=1666
Length=1666
Score = 2320 bits (1256), Expect = 0.0
Identities = 1405/1474 (95%), Gaps = 22/1474 (1%)
Strand=Plus/Plus
Query 32 CTCTCCTTTTGCTTCTGGTCCTCTCGTCTCGTTTCGCCG--CTCTATA-GGGCAAGAGAG 88
|||||||||||||||||||||||||||| |||||||||| ||||||| ||||||| |||
Sbjct 26 CTCTCCTTTTGCTTCTGGTCCTCTCGTCCCGTTTCGCCGCTCTCTATAGGGGCAAGTGAG 85
Query 89 AGATCGCTGTCTCTTTGTTCTCTCTTTTTCAGACAGTCGAGACGAGAAAGGCTCGTATCT 148
|| | ||||||| | |||| || ||||||||| ||||||||||||||||||||||||
Sbjct 86 AGGTTACTGTCTC--T-TTCT-TC--TTTCAGACACTCGAGACGAGAAAGGCTCGTATCT 139
Query 149 GATTTTACCGCCAAGAACCACCGGACTATCATCAGTGATAGAGAAGAATGGGTTACATAG 208
||||||| || | ||||||||| |||| |||||||| || ||||||||||||||
Sbjct 140 GATTTTA---CC--G--CCACCGGAC---CATCTGTGATAGACAATAATGGGTTACATAG 189
Query 209 GAGCTCATGGTGTAGCAGCTCTTCATAGGTACAAATACAGTGGAGTGGATCACTCTTATC 268
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 190 GAGCTCATGGTGTAGCAGCTCTTCATAGGTACAAATACAGTGGAGTGGATCACTCTTATC 249
Query 269 TTGCCAAATACGTGCTCCAACCTTTTTGGACTCGATTTGTCAAAGTCTTCCCTCTATGGA 328
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 250 TTGCCAAATACGTCCTCCAACCTTTTTGGACTCGATTTGTCAAAGTCTTCCCTCTATGGA 309
Query 329 TGCCACCAAACATGATAACGCTTATGGGGTTTATGTTTCTAGTCACTTCCTCTCTGCTAG 388
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 310 TGCCACCAAACATGATAACGCTTATGGGGTTTATGTTTCTAGTCACTTCCTCCCTGCTAG 369
Query 389 GTTATATATATTCACCTCAGTTGGATTCTCCTCCTCCACGATGGGTTCACTTCGCACATG 448
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 370 GCTATATATATTCACCTCAGTTGGATTCTCCTCCTCCACGATGGGTTCACTTCGCACATG 429
Query 449 GTTTACTTCTCTTCTTGTATCAGACATTCGATGCGGTCGATGGGAAGCAAGCAAGAAGGA 508
|||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||
Sbjct 430 GTTTACTTCTCTTCTTGTATCAGACATTTGATGCGGTTGATGGGAAGCAAGCAAGAAGGA 489
Query 509 CAAATTCCTCTAGCCCCCTGGGAGAGCTTTTCGATCATGGTTGTGACGCACTTGCTTGTG 568
||||||||||||||||||| |||||||| |||||||||||||||||||| ||||||||||
Sbjct 490 CAAATTCCTCTAGCCCCCTAGGAGAGCTCTTCGATCATGGTTGTGACGCGCTTGCTTGTG 549
Query 569 CGTTTGAAGCCATGGCATTTGGAAGCACTGCAATGTGTGGAAGAGATACTTTCTGGTTCT 628
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 550 CGTTTGAAGCCATGGCATTTGGAAGCACTGCAATGTGTGGAAGAGATACTTTCTGGTTCT 609
Query 629 GGGTTATTTCAGCTATTCCATTTTATGGAGCTACATGGGAACACTATTTCACCAACACAC 688
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 610 GGGTTATTTCAGCTATTCCATTTTATGGAGCTACATGGGAACACTATTTCACCAACACAC 669
Query 689 TTATTCTTCCGGTTATCAATGGGCCTACTGAGGGTCTTGCACTTATATTTGTCAGCCACT 748
|||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||
Sbjct 670 TTATTCTTCCGGTTATCAATGGGCCTACAGAGGGGCTTGCACTTATATTTGTCAGCCACT 729
Query 749 TCTTCACAGCCATTGTCGGTGCTGAATGGTGGGCTCAGCAGTTGGGGCAGTCAATACCAT 808
||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 730 TCTTCACAGCCATCGTCGGTGCTGAATGGTGGGCTCAGCAGTTAGGGCAGTCAATACCAT 789
Query 809 TGTTTAGTTGGGTGCCATTTGTGAATGAGATCCAAACTTCCAGAGCAGTGCTATACATGA 868
||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||
Sbjct 790 TGTTTAGTTGGGTGCCATTTGTGAATGAGATTCAAACTTCTAGAGCAGTGCTATACATGA 849
Query 869 TGATTGCTTTTGCTGTTATACCAACCGTTGCATTCAATGTAAAAAATGTCTACAAAGTCG 928
|||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 850 TGATCGCTTTTGCTGTTATACCAACCGTTGCATTCAATGTAACAAATGTCTACAAAGTCG 909
Query 929 TTCAATCAAGAAAAGGGAGCATGGTGTTAGCACTAGCTATGCTGTATCCCTTTGTTGTCC 988
||| ||||||||| ||||||||||||||||| ||||||||||||||||||| ||||||
Sbjct 910 TTCGATCAAGAAACGGGAGCATGGTGTTAGCGTTAGCTATGCTGTATCCCTTCGTTGTCT 969
Query 989 TACTTGGAGGAGTTTTGATATGGGATTACTTGTCTCCAATCAATCTCATAGCAACATACC 1048
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 970 TACTTGGAGGAGTTTTGATATGGGATTACTTGTCTCCAATCAATCTCATAGCAACATATC 1029
Query 1049 CTCACTTAGTTGTACTCGGAACTGGACTTGCATTTGG-TTTTCTAGTGGGAAGAATGATT 1107
||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||
Sbjct 1030 CTCACTTAGTTGTACTCGGAACTGGACTTGCATTTGGATTTT-TAGTGGGAAGAATGATT 1088
Query 1108 CTTGCTCACTTGTGTGATGAGCCTAAAGGACTAAAAACAAACATGTGCATGTCGCTACTC 1167
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 1089 CTTGCTCACTTGTGTGATGAGCCTAAAGGACTAAAAACAAACATGTGCATGTCACTACTC 1148
Query 1168 TATCTTCCCTTTGCGCTCGCAAATGCGCTAACCGCGAGATTGAATGCTGGGGTTCCTCTA 1227
|||||||||||||| || ||||||||||||||||| ||||||||||||||||||||||||
Sbjct 1149 TATCTTCCCTTTGCACTTGCAAATGCGCTAACCGCAAGATTGAATGCTGGGGTTCCTCTA 1208
Query 1228 GTCGACGAATTATGGGTTCTTCTTGGCTACTGCATATTCACAGTGTCATTATACTTGCAC 1287
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1209 GTCGACGAATTATGGGTTCTTCTTGGCTACTGCATATTCACAGTGTCATTATACTTGCAC 1268
Query 1288 TTTGCAACATCGGTCATCCATGAGATCACTGAGGCTCTTGGAATCTACTGCTTCAGGATC 1347
||||||||||| ||||||||||||||||||||||| ||||||||||||||||| ||||||
Sbjct 1269 TTTGCAACATCAGTCATCCATGAGATCACTGAGGCCCTTGGAATCTACTGCTTTAGGATC 1328
Query 1348 ACACGTAAAGAAGCTTGAAAAGAAACCTTTGACACAGCGAATGGTCGATATGGACCTGTT 1407
|| |||||||||||||||||||||||||||||||| |||||||||||||||||||| |||
Sbjct 1329 ACGCGTAAAGAAGCTTGAAAAGAAACCTTTGACACTGCGAATGGTCGATATGGACCAGTT 1388
Query 1408 GCATCGGTGGTGTATTTCTTCTTATTATTCATTGTTGTCTGTTTGGTCAGGATAGGTGAA 1467
| ||||||| ||||||||||||| ||||||||||||||||||||| ||||||||||||||
Sbjct 1389 GGATCGGTGATGTATTTCTTCTTCTTATTCATTGTTGTCTGTTTGATCAGGATAGGTGAA 1448
Query 1468 -TTATGTAGAACTTTGTGTAATGTTCTTGTTTTT 1500
|||||||||||||||| ||||||||||||||||
Sbjct 1449 GTTATGTAGAACTTTGTATAATGTTCTTGTTTTT 1482
Score = 143 bits (77), Expect = 6e-33
Identities = 87/91 (96%), Gaps = 3/91 (3%)
Strand=Plus/Plus
Query 1523 GAAAATT-GCTTGGCTGGATTTGGTTTTGCAAGCATTTGAGGAATTGGTTGACTTTTGAC 1581
||||||| || ||||||||||||| ||||||||||||| |||||||||||||||||||||
Sbjct 1576 GAAAATTGGC-TGGCTGGATTTGG-TTTGCAAGCATTTCAGGAATTGGTTGACTTTTGAC 1633
Query 1582 TTTTTGTAATACGACTATACCAAAGAGTTCT 1612
|||||||||||||||||||||||||||||||
Sbjct 1634 TTTTTGTAATACGACTATACCAAAGAGTTCT 1664
> AT3G25585.2 | Symbols: AAPT2, ATAAPT2 | aminoalcoholphosphotransferase
| chr3:9295373-9298746 FORWARD LENGTH=1711
Length=1711
Score = 1103 bits (597), Expect = 0.0
Identities = 1001/1194 (84%), Gaps = 35/1194 (3%)
Strand=Plus/Plus
Query 190 AGAAGAATGGGTTACATAGGAGCTCATGGTGTAGCAGCTCTTCATAGGTACAAATACAGT 249
|||| |||||||||||||||||||||||||||||| |||||| | | |||||||||||
Sbjct 159 AGAA-AATGGGTTACATAGGAGCTCATGGTGTAGCTGCTCTTAAGAAACACAAATACAGT 217
Query 250 GGAGTGGATCACTCTTATCTTGCCAAATACGTGCTCCAACCTTTTTGGA-CTCGATTTGT 308
|| || ||||||||||||||||||||||| || |||||||||||||||| | || |||||
Sbjct 218 GGTGTTGATCACTCTTATCTTGCCAAATATGTTCTCCAACCTTTTTGGAAC-CGTTTTGT 276
Query 309 CAAAGTCTTCCCTCTATGGATGCCACCAAACATGATAACGCTTATGGGGTTTATGTTTCT 368
|||| ||||||||||||||||||| || ||||||||||| ||||||||||| ||||||||
Sbjct 277 CAAAATCTTCCCTCTATGGATGCCCCCCAACATGATAACACTTATGGGGTTCATGTTTCT 336
Query 369 AGTCACTTCCT-CTCTGCT-AGGTTATATATATTCACCTCAGTTGGATTCTCCTCCTCCA 426
|||| || | |||| || ||| |||||||| |||||| ||||||||||||| |||||
Sbjct 337 TCTCACATC-TGCTCT-CTTAGGCTATATATACTCACCTAAGTTGGATTCTCCACCTCCT 394
Query 427 CGATGGGTTCACTTCGCACATGGTTTACTTCTCTTCTTGTATCAGACATTCGATGCGGTC 486
|||||||| ||||| ||||| || |||||||| || || ||||||||||| ||||||||
Sbjct 395 CGATGGGTCCACTTTGCACACGGCTTACTTCTGTTTTTATATCAGACATTTGATGCGGTT 454
Query 487 GATGGGAAGCAAGCAAGAAGGACAAATTCCTCTAGCCCCCTGGGAGAGCTTTTCGATCAT 546
||||||||||||||| |||| |||||||| |||||||| || ||||||||||| || |||
Sbjct 455 GATGGGAAGCAAGCACGAAGAACAAATTCATCTAGCCCACTAGGAGAGCTTTTTGACCAT 514
Query 547 GGTTGTGACGCACTTG-CTTGTGCGTTTGAAGCCATGGCATTTGGAAGCACTGCAATGTG 605
||||| || ||||||| || ||||||| ||| | ||||||| ||| || ||||| |||||
Sbjct 515 GGTTGCGATGCACTTGGCT-GTGCGTTAGAAACAATGGCATATGGGAGTACTGCTATGTG 573
Query 606 TGGAAGAGATACTTTCTGGTTCTGGGTTATTTCAGCTATTCCATTTTATGGAGCTACATG 665
||||||||||||||||||||| ||||||||||| ||| ||||||||| |||||| |||||
Sbjct 574 TGGAAGAGATACTTTCTGGTTTTGGGTTATTTCTGCTGTTCCATTTTTTGGAGCAACATG 633
Query 666 GGAACACTATTTCACCAACACACTTATTCTTCCGGTTA-TCAATGGGCCTACTGAGGGTC 724
|||||||||||| ||||| || |||| ||||||||| | ||||||| ||||| || ||||
Sbjct 634 GGAACACTATTTTACCAATACGCTTACTCTTCCGGT-AGTCAATGGTCCTACAGAAGGTC 692
Query 725 TTGCACTTATATT-TGTCAGCCACTTCTTCACAGCCATTGTCGGTGCTGAATGGTGGGCT 783
|||||||||||| ||| |||| ||||||||||||||||| ||||| || |||||||||
Sbjct 693 TTGCACTTATATACTGTG-GCCATTTCTTCACAGCCATTGTTGGTGCGGAGTGGTGGGCT 751
Query 784 CAGCAGTTGGGGCAGTCAATACCATTGTTTAGTTGGGTGCCATTTGTGAATGAGATCCAA 843
|||| ||| ||| |||| || || |||||||||||||| || ||| |||| ||||| |||
Sbjct 752 CAGCCGTTTGGGAAGTCGATTCCTTTGTTTAGTTGGGTTCCGTTTTTGAACGAGATGCAA 811
Query 844 ACT-TCCAGAGCAGTGCTATACATG-ATGATTG-CTTTTGCTGTTATACCAACCGTTGCA 900
| | |||||| | | |||| | | |||||| |||| ||||||||||||||| |||||
Sbjct 812 A-TGTCCAGAATAATACTATTC-TCCATGATTTTCTTT-GCTGTTATACCAACCCTTGCA 868
Query 901 TTCAAT--GTAAAAAATGTCTACAAAGTCGTTCAATCAAGAAAAGGGAGCATGGTGT-TA 957
|||| || || ||| |||||||| || || |||||||| || |||||| | | ||
Sbjct 869 ATCAACACGTCTAA--TGTTTACAAAGTTGTACATTCAAGAAATGGAAGCATGCT-TCTA 925
Query 958 GCACTAGCTATGCTGTATCCCTTTGTTGTCCT-ACTTGGAGGAGTTTTGATATGGGATTA 1016
||| |||||||||| |||||||| || | | | ||| ||||||| |||| ||||||||
Sbjct 926 GCATTAGCTATGCTATATCCCTTAGTCA-CGTTAATTGCAGGAGTTCTGATTTGGGATTA 984
Query 1017 CTTGTCTCCAATCAATCTCATA-GCAACATACCCTCACTTAGTTGTACTCGGAACTGGAC 1075
|||||||||||| |||||||| | ||| ||||||||||||||||| | |||||||| |
Sbjct 985 CTTGTCTCCAATTGATCTCATAAGAAAC-TACCCTCACTTAGTTGTGTTGGGAACTGGTC 1043
Query 1076 TTGCATTTGGTTTTCTAGTGGGAAGAATGATTCTTGCTCACTTGTGTGATGAGCCTAAAG 1135
|||||||||| || || ||||||||||||||||| |||||||| ||||| || || ||||
Sbjct 1044 TTGCATTTGGATTCCTTGTGGGAAGAATGATTCTAGCTCACTTATGTGACGAACCAAAAG 1103
Query 1136 GACTAAAAACAAACATGTGCATGTCGCTACTCTATCTTCCCTTTGCGCTCGCAAATGCGC 1195
|| | |||||||||||||| ||||| || || || ||||| ||||| || |||||||| |
Sbjct 1104 GATTGAAAACAAACATGTGTATGTCACTGCTTTACCTTCCATTTGCACTAGCAAATGCTC 1163
Query 1196 TAACCGCGAGATTGAATG-CTGGGGTTCCTCTAGTCGACGAATTATGGGTTCTTCTTGGC 1254
||||||| ||| | || | | ||||||||||| || || || || ||||||||||||||
Sbjct 1164 TAACCGCTAGACTCAACGAC-GGGGTTCCTCTTGTGGATGAGTTTTGGGTTCTTCTTGGA 1222
Query 1255 TACTGCATATTCACAGTGTCATTATACTT-GCACTTTGCAACATCGGTCATCCATGAGAT 1313
|| || ||||||||| ||||| |||| | ||| |||||||| || ||||| ||||||||
Sbjct 1223 TATTGTATATTCACATTGTCACTATA-TGCGCATTTTGCAACTTCAGTCATTCATGAGAT 1281
Query 1314 CACTGAG-GCTCTTGGAATCTACTGCTTCAGGATCACACGTAAAGAAGCTTGAA 1366
||| | || ||||||||||||||||||||||| || || |||||||||||||
Sbjct 1282 CACA-ACTGCACTTGGAATCTACTGCTTCAGGATTACTCGGAAAGAAGCTTGAA 1334
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 79618064370
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5