BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg471527
Length=2375
Score E
Sequences producing significant alignments: (Bits) Value
AT1G13640.1 | Symbols: | Phosphatidylinositol 3- and 4-kinase ... 3552 0.0
AT2G03890.1 | Symbols: ATPI4K GAMMA 7, UBDK GAMMA 7, PI4K GAMMA... 1349 0.0
> AT1G13640.1 | Symbols: | Phosphatidylinositol 3- and 4-kinase
family protein | chr1:4677027-4679812 REVERSE LENGTH=2489
Length=2489
Score = 3552 bits (1923), Expect = 0.0
Identities = 2263/2417 (94%), Gaps = 63/2417 (3%)
Strand=Plus/Plus
Query 1 TGAGAGTTAAAAAAGCGTCGTTGAGAGGTTAGAGACGAAGAAAGGAGGCAGA-GAT---- 55
|||||||||||||||||||||||||||||||||||||||| ||||||||||| |||
Sbjct 1 TGAGAGTTAAAAAAGCGTCGTTGAGAGGTTAGAGACGAAGGAAGGAGGCAGAGGATAGAG 60
Query 56 AGATAGCGAGGCTAATGGATCAGTGACTCACTGAGTCAGATTTTACCGATTCATTGCCTC 115
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 61 AGATAGCGAGGCTAATGGATCAGTGACTCACTGAGTCAGATTTTACCGATTCATTGCCTC 120
Query 116 CATTGAAGCCTCTTCTCTCAGATTCTACGCTTCACTGTCTCTTCTCCATGTGCG------ 169
|||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 121 CATTGAAGCCTCTTTTCTCAGATTCTACGCTTCACTGTCTCTTCTCCATGTGCGTCTCCT 180
Query 170 -----T-C---TCTTCAGATCTTG-TTCTCCGGTGACGATTTTAATCTTCTTCTCTCTGG 219
| | ||||||||||||| || |||||||||| |||||||||||||||||||||
Sbjct 181 CCTCCTCCGTTTCTTCAGATCTTGCTT-TCCGGTGACGGTTTTAATCTTCTTCTCTCTGG 239
Query 220 TACCACCTATAAAGCATGGCTTACC-----T-G--ATGTAGTGTCAGGGTAAAGGTTCTT 271
|| ||| |||||||||||||||||| | | ||||||||| ||| ||||| || |
Sbjct 240 TAACACGTATAAAGCATGGCTTACCTGATGTAGACATGTAGTGTTAGGCTAAAGACTCCT 299
Query 272 GTTTTCACTTCTGTCTGGTGGAGCTCGTGTTGGTTTAA-G-----A--CGAAGGCGTTGT 323
||||||||||||||| || ||| | |||||||||||| | | | ||||||||||
Sbjct 300 CTTTTCACTTCTGTCTTGTTGAGTTTGTGTTGGTTTAAGGCTTTAAGCCAAAGGCGTTGT 359
Query 324 TGTTCTGA-AGAGATGGCAATGGCAGTGTTTAAGGCTCCTCTTAAAGGGGAATTTCATGG 382
|| ||||| | ||||||||||||| ||||||||||||||||| |||||||||||||||||
Sbjct 360 TGGTCTGACA-AGATGGCAATGGCGGTGTTTAAGGCTCCTCTAAAAGGGGAATTTCATGG 418
Query 383 GGCTAGAAAGATGGAAGGGAAACAGTATAAGCATCATCTTCTTCAGCAACAGTCTTCAGG 442
||||||||||||||||||||| || |||||||| ||||| ||||||||||||||| ||||
Sbjct 419 GGCTAGAAAGATGGAAGGGAAGCAATATAAGCACCATCTGCTTCAGCAACAGTCTACAGG 478
Query 443 GAGGAGACGTGTTTTCGTGCAAACCGAAACTGGCTGTGTTTTGGGAGTTGAGTTGGATCG 502
||| |||||||| |||||||||||||| ||||||||||| ||||||||||||||||||||
Sbjct 479 GAGAAGACGTGTGTTCGTGCAAACCGATACTGGCTGTGTGTTGGGAGTTGAGTTGGATCG 538
Query 503 TAATGACAATGTTCATACTGTGAAGAAAAGGCTTCAGATTGCGTTTAACTTTCCTACTGA 562
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 539 TAATGACAATGTTCATACTGTGAAGAAAAGGCTTCAGATTGCGTTTAACTTTCCTACTGA 598
Query 563 GGAAAGCTCTTTGACCTTTGGGGATATGGTGTTGAAGAATGACTTGAGTGCTGTGAGGAA 622
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 599 GGAAAGCTCTTTGACCTTTGGGGATATGGTGTTGAAGAATGACTTGAGTGCTGTGAGGAA 658
Query 623 TGATTCACCGCTTCTCCTGAAGCGTAACTTAATGCACAGAAGTTCGTCTACTCCGTGTCT 682
|||||| ||||||||| | ||||||||||||||||||||||| || ||||||||||||||
Sbjct 659 TGATTCTCCGCTTCTCTTAAAGCGTAACTTAATGCACAGAAGCTCTTCTACTCCGTGTCT 718
Query 683 TTCACCTACTGGGAATGATCTGCAGAGGAAAGATCGAAGTGGTCCTATTGAGATACTTAG 742
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 719 TTCACCTACTGGGAATGATCTGCAGAGGAAAGATCGAAGTGGTCCTATTGAGATACTTAG 778
Query 743 TCACTCGCATTGCTTTATGTCTTTGAAGCAAACTGCGAATGACATTGTTAAGGCGATGAA 802
|||||||| || ||| |||||||||||||||| ||||||||||||||||||||||||||
Sbjct 779 TCACTCGCCCTGTTTTCTGTCTTTGAAGCAAACAGCGAATGACATTGTTAAGGCGATGAA 838
Query 803 GATGGGTGTTGAACCAATCCCTGTCAATGGTGGGCTTGGAGGGGCATACTATTTTAGGAA 862
|||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |
Sbjct 839 GATGGGTGTTGAACCAATCCCTGTTAATGGTGGGCTTGGAGGGGCATACTATTTTAGGGA 898
Query 863 TGAAATGGGTCAAAGCGTTGCTATTGTCAAGCCTACGGATGAAGAACCGTTTGCTCCTAA 922
||||| ||||||||| ||||||||||||||||||||||||||||| |||||||| |||||
Sbjct 899 TGAAAAGGGTCAAAGTGTTGCTATTGTCAAGCCTACGGATGAAGAGCCGTTTGCCCCTAA 958
Query 923 CAATCCTAAAGGCTTCGTAGGGAAAGCGCTTGGGCAGCCTGGTTTAAAGCCTTCTGTGCG 982
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 959 CAATCCTAAAGGCTTCGTAGGGAAAGCGCTTGGGCAGCCTGGTTTAAAGCCTTCTGTGCG 1018
Query 983 AGTTGGGGAAACCGGGTTTAGAGAAGTTGCTGCTTACCTTCTTGATTATGATCACTTTGC 1042
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 1019 GGTTGGGGAAACCGGGTTTAGAGAAGTTGCTGCATACCTTCTTGATTATGATCACTTTGC 1078
Query 1043 TAATGTTCCTCCCACGGCTCTTGTGAAGATAACACACTCTGTTTTCAATGTCAATGATGG 1102
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1079 TAATGTTCCTCCTACGGCTCTTGTGAAGATAACACACTCTGTTTTCAATGTCAATGATGG 1138
Query 1103 AATGGACGGGAACAAATCTCGTAAGAAGAAGAAGCTGGTCAGCAGCAAGATTGCTTCGTT 1162
|||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 1139 AATGGATGGGAACAAATCTCGTGAGAAGAAGAAGCTGGTCAGCAGCAAGATTGCTTCGTT 1198
Query 1163 CCAGAAGTTTGTACCTCATGATTTTGATGCCAGTGATCACGGGACTTCAAGCTTCCCTGT 1222
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1199 CCAGAAGTTTGTACCTCATGATTTTGATGCCAGTGATCACGGGACTTCAAGCTTCCCTGT 1258
Query 1223 CGCTTCTGTGCACCGCATTGGGATATTGGACATAAGGATTCTCAACACAGACCGGCATGG 1282
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 1259 CGCTTCTGTGCACCGCATTGGGATTTTGGACATAAGGATTCTCAACACAGACCGGCATGG 1318
Query 1283 TGGAAACCTTTTGGTGAAGAAGCTTGATGATGGTGGTGTTGGGAGGTTTGGTCAAGTGGA 1342
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1319 TGGAAATCTTTTGGTGAAGAAGCTTGATGATGGTGGTGTTGGGAGGTTTGGTCAAGTGGA 1378
Query 1343 GCTTATTCCAATAGATCATGGTCTTTGCTTACCAGAAACACTTGAAGATCCTTACTTCGA 1402
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 1379 GCTTATTCCAATAGATCATGGTCTTTGCTTACCAGAAACACTCGAAGATCCTTACTTCGA 1438
Query 1403 ATGGATTCATTGGCCTCAGGCTTCACTACCTTTCTCTGAAGAAGAACTTGACTACATACA 1462
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 1439 ATGGATTCATTGGCCTCAGGCTTCAATACCTTTCTCTGAAGAAGAACTTGACTACATACA 1498
Query 1463 AAGTCTTGATCCAGTGAAAGATTGTGAAATGCTTCGAAGAGAGCTTCCAATGATTCGAGA 1522
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 1499 AAGTCTTGATCCAGTGAAAGATTGTGAAATGCTTCGAAGAGAGCTTCCGATGATTCGAGA 1558
Query 1523 GGCTTGTCTCAGGGTTCTAGTTCTGTGTACTGTATTTC-TCAAAGAAGCTGCTGTTTTTG 1581
|||||||||||||||||||||||| ||||| || |||| | |||||||||||||||||||
Sbjct 1559 GGCTTGTCTCAGGGTTCTAGTTCTCTGTACCGT-TTTCCTTAAAGAAGCTGCTGTTTTTG 1617
Query 1582 GACTTTGTCTTGCAGAGATTGGTGAGATGATGACTCGAGAATTTCGTGCAGGAGAAGAAG 1641
||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |
Sbjct 1618 GACTTTGTCTTGCAGAGATCGGTGAGATGATGACTCGAGAATTTCGTGCAGGAGAAGAGG 1677
Query 1642 AACCAAGTGAACTAGAAATGTTGTGTATCGAAGCCAAGAGATTAACCACTGAACAAGATG 1701
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 1678 AACCAAGTGAACTAGAAATGTTGTGTATCGAAGCCAAGAGATTAACCACTGAACAAGACG 1737
Query 1702 TTTTATCTCCCAAGTCAGATGTAGAAGGAGAAACAGAGTTTCAGTTTGACATAGACTACA 1761
|||| |||||||||||||||| ||||||||| ||||||||||||||||| ||||||||||
Sbjct 1738 TTTTGTCTCCCAAGTCAGATGGAGAAGGAGAGACAGAGTTTCAGTTTGATATAGACTACA 1797
Query 1762 ATGACCTAGACTTGGTTTATGGCTCTGAGACAGGAACCGTTGAGTTCTTTGCCAAGAACC 1821
|||| ||||||| |||||||||||||||||||| ||||| ||||||||| ||||||||||
Sbjct 1798 ATGAGCTAGACTCGGTTTATGGCTCTGAGACAGAAACCGATGAGTTCTTCGCCAAGAACC 1857
Query 1822 CATTTTCAAACGGATGTTCTTCACTTGGAGAGCTCAAAGAGAGCATTGCGGAAGAAGAAG 1881
|||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 1858 CATTTTCAAACGGACGTTCTTCACTTGGAGAGCTCAAAGAGAGCATTGCTGAAGAAGAAG 1917
Query 1882 AAGACGACAAAGATGAGGCAATACTTACTCTATCTCTCTCAAAGCTTTCCACATCAATGA 1941
|||| ||| |||| ||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 1918 AAGATGACGAAGAGGAGGCAAAACTTACTCTATCTCTCTCAAAGCTTTCCACATCAATGA 1977
Query 1942 AGAACAACAATCTAAGCAACACCATGGGATCTGGACACCTGAAACCTCCGAGAGACAACA 2001
||||||| ||||||||||||||||||||| ||| ||||||||||||||| |||||||
Sbjct 1978 AGAACAA---TCTAAGCAACACCATGGGATCCGGATACCTGAAACCTCCGAAAGACAACC 2034
Query 2002 AAACTGACAAAGCATTGGTAAGTCACAAGAGCGCGAACGTGCAGCTCCCTG-TTAGCGCA 2060
|||| |||||||||||||||||||||||||||||||||||||||||||| | |||||| |
Sbjct 2035 AAACCGACAAAGCATTGGTAAGTCACAAGAGCGCGAACGTGCAGCTCCC-GCTTAGCGTA 2093
Query 2061 AACTTTGTGAAGTTAGCGGACATGAAAGAAGTTGAATGGGTTGTGTTCTTGGAGAGGTTT 2120
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 2094 AACTTTGTGAAGTTAGCCGACATGAAAGAAGTTGAATGGGTTGTGTTCTTGGAGAGGTTT 2153
Query 2121 CAGGAGTTGCTTCACTCGGCTTTTGCAGAGCGCAAGACCCTGACGTTGAGGAACACGCAG 2180
|||||||||||| |||||||||||||||| ||||||||| |||||||||||||||| |||
Sbjct 2154 CAGGAGTTGCTTTACTCGGCTTTTGCAGAACGCAAGACCATGACGTTGAGGAACACACAG 2213
Query 2181 AGACTTGGTACATCGTGCAAGTTTTGAGATCATATGACTATATGAGTTCACATAGGAGAA 2240
|||||||||||||||||||||||||||||||||| | ||||||||||| |||||
Sbjct 2214 AGACTTGGTACATCGTGCAAGTTTTGAGATCATA---C-----GAGTTCACATAAGAGAA 2265
Query 2241 TACCAAAGATTTTACTTTCACGAGTTGAGTTTTGAAGCAATTACTTGTTAGCTACGTTAA 2300
||||||||||| ||||| ||||||| || |||||||||||||||||||||||||||
Sbjct 2266 GACCAAAGATTTCACTTTTACGAGTT---TT--GAAGCAATTACTTGTTAGCTACGTTAA 2320
Query 2301 GATTAGTTTACTTTTGTAGC-ATCCACGAGCACTTGCAACGTGAAGAAATGttt-ttttG 2358
|||||||||||||||||||| | |||||||||||||||| |||||||||||||| |||||
Sbjct 2321 GATTAGTTTACTTTTGTAGCGA-CCACGAGCACTTGCAATGTGAAGAAATGTTTATTTTG 2379
Query 2359 CCTGTAAATATTCTTTA 2375
|||||||||||||||||
Sbjct 2380 CCTGTAAATATTCTTTA 2396
> AT2G03890.1 | Symbols: ATPI4K GAMMA 7, UBDK GAMMA 7, PI4K GAMMA
7 | phosphoinositide 4-kinase gamma 7 | chr2:1185522-1188545
FORWARD LENGTH=2893
Length=2893
Score = 1349 bits (730), Expect = 0.0
Identities = 1277/1534 (83%), Gaps = 65/1534 (4%)
Strand=Plus/Plus
Query 380 TGGGGCTAGAAAGATGGAAGGGAAACAG--T-ATAAGCATCATC-TTCTTCAGCA-ACAG 434
||| ||||| |||||||||||||| ||| | |||||||||| | || | ||| | ||
Sbjct 615 TGGAGCTAGTAAGATGGAAGGGAAGCAGCATCATAAGCATCAGCATT-TACAG-AGGCAA 672
Query 435 TCTTCAGGGAGGAGACGTGTTTTCGTGCAAACCGAAACTGGCTGTGTTTT-GGGAGTTGA 493
|| || ||||||||| ||||||||||| || |||||||| |||||||| |||| | ||
Sbjct 673 TCATCGGGGAGGAGA---GTTTTCGTGCAGACTGAAACTGGTTGTGTTTTGGGGA-TGGA 728
Query 494 GTTGGATCGTAATGACAATGTTCATACTGTGAAGAA-AAGGCTTCAGATTGCGT-TTAAC 551
||||||||||| ||| |||||||||||||| || || |||||||||||||| | ||||
Sbjct 729 GTTGGATCGTAGTGATAATGTTCATACTGTTAA-AAGGAGGCTTCAGATTGC-TCTTAA- 785
Query 552 TTT-CCTACTGAGGAAAGCTCTTTGACCTT-TGGGGATATGGTGTTGAAGAATGACTTGA 609
||| |||||||| || || ||||||| ||| ||| ||||||||||||| |||||| ||||
Sbjct 786 TTTCCCTACTGAAGAGAGTTCTTTGA-CTTATGGTGATATGGTGTTGACGAATGATTTGA 844
Query 610 GTGCTGTGAGGAATGATTCACCGCTTCTCCTGAAGCGTAACTTAATGCA-CAGAAGTTCG 668
||||||||||||| ||||| |||||||| ||||| || ||||| ||||| | |||| |||
Sbjct 845 GTGCTGTGAGGAACGATTCTCCGCTTCTGCTGAAACGGAACTTTATGCATC-GAAGCTCG 903
Query 669 TCTACTCCGTGTCTTTCACCTACTGGGAATGATCTGC-AGAGGAAAGATCGAAGTGGTCC 727
|||||||| |||||||| |||||||||| ||| ||| | | ||||||||||||||||||
Sbjct 904 TCTACTCCTTGTCTTTCGCCTACTGGGAGGGATTTGCAACA-GAAAGATCGAAGTGGTCC 962
Query 728 TATTGAGATACTTA-GTCACTCGCATTGCTTTAT-GTCTT-TGAAGCAAACT-GCGAATG 783
||||||||||| || | || ||| |||||||| | | || | || || | | | || |
Sbjct 963 TATTGAGATAC-TAGGCCATTCGGATTGCTTT-TCG-ATTGTTAAACATA-TGGTTAAGG 1018
Query 784 ACATTGTTAAGGCGATGAAGATGGGTGTTGAACCAATCCCTGT-CAATGGTGGGCTTGGA 842
|||||||||||||||||||||||||||||||||| | ||||| || | | |||||||||
Sbjct 1019 ACATTGTTAAGGCGATGAAGATGGGTGTTGAACCGCTTCCTGTTCA-TAGCGGGCTTGGA 1077
Query 843 GGGGCATACTATTTTAGGAATGAAATGGGTCAAAGCGTTGCTATTGTCAAGCCTACGGAT 902
|| || |||||||||||||| ||| |||| | || ||||| ||||||||||| ||||||
Sbjct 1078 GGTGCTTACTATTTTAGGAACAAAAGGGGTGAGAGTGTTGCCATTGTCAAGCCGACGGAT 1137
Query 903 GAAGAACCGTTTGCTCCTAACAATCCTAAAGGCTTCGTAGGGAAAGCGCTTGGGCAGCCT 962
||||| |||||||| |||||||| ||||||||||| || |||||||| |||||||| |||
Sbjct 1138 GAAGAGCCGTTTGCACCTAACAACCCTAAAGGCTTTGTTGGGAAAGCCCTTGGGCAACCT 1197
Query 963 GGTTTAAAGCCTTCTGTGCGAGTTGGGGAAACCGGGTTTAGAGAAGTTGCTGCTTACCTT 1022
|| || ||| |||| ||||||||||||||||| ||||||||||||||||||||||| |||
Sbjct 1198 GGATTGAAGTCTTCGGTGCGAGTTGGGGAAACGGGGTTTAGAGAAGTTGCTGCTTATCTT 1257
Query 1023 CTTGATTATGATCACTTTGCTAATGTTCCTCCCACGGCTCTTGTGAAGATAACACACTCT 1082
|||||||||| || |||||||||||| ||||| || ||||||||||||||||| || |||
Sbjct 1258 CTTGATTATGGTCGCTTTGCTAATGTCCCTCCAACTGCTCTTGTGAAGATAACTCATTCT 1317
Query 1083 GTTTTCAATGTCAATGATGGAATGGACGGGAACAAATCTCGTAAGAAGAAGAAGCTGGTC 1142
|| ||||||||||| ||||| || | |||||||| |||| || ||||||||||||
Sbjct 1318 GTATTCAATGTCAACGATGGGGTGAAGGGGAACAAGCCTCGG--GA-GAAGAAGCTGGTT 1374
Query 1143 AGCAGCAAGATTGCTTCGTTCCAGAAGTTTGTACCTCATGATTTTGATGCCAGTGATCAC 1202
|| | | ||||||||| |||||||||||||| |||||||||| ||||| ||||||||
Sbjct 1375 AGTA--A-GATTGCTTCTTTCCAGAAGTTTGTGGCTCATGATTTCGATGCAAGTGATCAT 1431
Query 1203 GGGACTTCAAGCTTCCCTGTCGCTTCTGTGCACCGCATTGGGATATTGGACATAAGGATT 1262
|| ||||||||||||||||| ||||||||||||||||||| || ||||||||||||||
Sbjct 1432 GGTACTTCAAGCTTCCCTGTAACTTCTGTGCACCGCATTGGTATTTTGGACATAAGGAT- 1490
Query 1263 CT-CAACACAGACCGGCATGGTGGAAACCTTTTGGTGAAGAAGCTTGATGATGGTGGTGT 1321
|| |||||||||||| |||||||| || ||||||||||||||||| |||| | | | |
Sbjct 1491 CTTCAACACAGACCGTCATGGTGGGAATCTTTTGGTGAAGAAGCTCGATG--GA-G-T-T 1545
Query 1322 TGGGAGGTTTGGTCAAGTGGAGCTTATTCCAATAGATCATGGTCTTTGCTTACCAGAAAC 1381
|| | |||||||||||||||||||||||||||||| ||||| || ||| | ||||||||
Sbjct 1546 -GGTATGTTTGGTCAAGTGGAGCTTATTCCAATAGACCATGGCCTCTGCCTGCCAGAAAC 1604
Query 1382 ACTTGAAGATCCTTACTTCGAATGGATTCATTGGCCTCAGGCTTCACTACCTTTCTCTGA 1441
|||||| |||||||| || || |||||||||||||||||||| ||| |||| ||||||||
Sbjct 1605 ACTTGAGGATCCTTATTTTGAGTGGATTCATTGGCCTCAGGCATCATTACCATTCTCTGA 1664
Query 1442 AGAAGAACTTGACTACATACAAAGTCTTGATCCAGTGAAAGATTGTGAAATGCTTCGAAG 1501
||||| |||||||||||||||||||||||||||||||||| ||||| |||||| ||||
Sbjct 1665 TGAAGAGGTTGACTACATACAAAGTCTTGATCCAGTGAAAGACTGTGACATGCTTAGAAG 1724
Query 1502 AGAGCTTCCAATGATTCGAGAGGCTTGTCT-CAGGGTTCTAGTTCTGTGTACTGTATTTC 1560
|| |||||||||||| ||||||| ||||| | ||||||| ||||| |||||| | ||||
Sbjct 1725 GGAACTTCCAATGATTAGAGAGGCGTGTCTTC-GGGTTCTTGTTCTCTGTACTAT-TTTC 1782
Query 1561 -TCAAAGAAGCTGCTGTTTTTGGACTTTGTCTTGCAGAGATTGGTGAGATGATGACTCGA 1619
| ||||||||| ||| | ||| || |||||||| |||||||| ||||||||||||||
Sbjct 1783 CTTAAAGAAGCTTCTGCATATGGTCTGTGTCTTGCCGAGATTGGCGAGATGATGACTCGG 1842
Query 1620 GAATTTCGTGCAGGAGAAGAAGAACCAAGTGAACTAGAAAT-GTTGTGTATCGAAGCCAA 1678
||||||||| | |||||||| || ||||||||||| || | || |||||| ||||||||
Sbjct 1843 GAATTTCGTCCTGGAGAAGAGGAGCCAAGTGAACTGGAGGTTGT-GTGTATTGAAGCCAA 1901
Query 1679 GAGATTAACCACTGAACAAGATGTTTTATCTCCCAAG-TCAGATGTAGAAGGAGAAACAG 1737
||||| | |||||||| ||||||||| ||||| ||| |||||||||| ||||||| |||
Sbjct 1902 GAGATCAGTCACTGAACGAGATGTTTTCTCTCC-AAGGTCAGATGTAGTAGGAGAAGCAG 1960
Query 1738 AGTTTCAGTTTGA-CATAGACTACAATGACCTAGACTTGGTTTATGGCTCTGAGA--CAG 1794
||||||||||||| | |||||| |||| | || | || || | ||| ||| ||
Sbjct 1961 AGTTTCAGTTTGATC-TAGACTGTGATGATTTGGAGTCAGTCTACAGTTCTAAGATACAA 2019
Query 1795 G-AACCGTTGAGTTCTTTG-CCAAGAACCCATTTTCAAACGGATGTTCTTCACTTGGAGA 1852
||||| ||| | ||| |||| ||||| |||||||| ||| ||||||| || || ||
Sbjct 2020 CTAACCGATGACTA-TTTCACCAAAAACCCTTTTTCAAATGGACGTTCTTCGCTCGG-GA 2077
Query 1853 -GCTCAAAGAGAGCATTGCGGAAGAAGAAGAAGA 1885
||| |||| ||||| |||||||||||||||
Sbjct 2078 AGCTTGAAGAAAGCATCAAGGAAGAAGAAGAAGA 2111
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 117921080205
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5