BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg471571
Length=1086
Score E
Sequences producing significant alignments: (Bits) Value
AT1G14130.1 | Symbols: | 2-oxoglutarate (2OG) and Fe(II)-depen... 1701 0.0
AT1G14120.1 | Symbols: | 2-oxoglutarate (2OG) and Fe(II)-depen... 832 0.0
> AT1G14130.1 | Symbols: | 2-oxoglutarate (2OG) and Fe(II)-dependent
oxygenase superfamily protein | chr1:4835724-4837616
REVERSE LENGTH=1400
Length=1400
Score = 1701 bits (921), Expect = 0.0
Identities = 1035/1090 (95%), Gaps = 8/1090 (1%)
Strand=Plus/Plus
Query 1 ATGGAGGAACTAAATGGAG---TCATTCCGACTATAGACTTGAAAGAGGTTTCTGATAAG 57
|||| ||||||||| |||| |||||||||||||||||||| |||||||||||||||||
Sbjct 157 ATGGGGGAACTAAACGGAGTCATCATTCCGACTATAGACTTGGAAGAGGTTTCTGATAAG 216
Query 58 ATTCTGAATCAGAAAATCCGTGAAGCGAGTGAGAGATTGGGATGTTTCAGGGTCATTAAC 117
|||||||||||||||||||||||||| |||||||||| ||||||||||||||| || |||
Sbjct 217 ATTCTGAATCAGAAAATCCGTGAAGCCAGTGAGAGATGGGGATGTTTCAGGGTGATAAAC 276
Query 118 CATGGAGTTTCACTGTCTTTGATGGCTGAGATGAAGAAGACTGTTATTGATCTCTTTCAA 177
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 277 CATGGAGTTTCATTGTCTTTGATGGCTGAGATGAAGAAGACTGTTATTGATCTCTTTCAA 336
Query 178 CGTCCATACGAGGTGAAACTGCGTAACACCGATGTGCTTCTAGGGAGTGGTTACAGAGCT 237
|||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||
Sbjct 337 CGTCCATACGAGGTGAAAGTGCGTAACACCGATGTGCTCCTAGGGAGTGGTTACAGAGCT 396
Query 238 CCAAATGAAATCAATCCTTACTATGAAGCATTAGGTCTCTATGATATGGCTTCTCCTCAA 297
||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 397 CCAAACGAAATCAATCCTTACTATGAAGCATTAGGTCTCTATGACATGGCTTCTCCTCAT 456
Query 298 GCTGTCAATACCTTTTGTGACCAACTCGAAGCTTCTGCGGATCAAAGGGAGATTATGGTA 357
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 457 GCTGTCAATACCTTTTGTGACCAACTCGAAGCTTCTGCAGATCAAAGGGAGATTATGGTG 516
Query 358 AAGTATGCGAAAGCTATCAATGGACTTGCAACGGATTTAGTGAGGAGATTAGCAGAGAGT 417
||||||||||| |||||||||||||||||||||||||||| ||||| |||||||||||||
Sbjct 517 AAGTATGCGAAGGCTATCAATGGACTTGCAACGGATTTAGCGAGGAAATTAGCAGAGAGT 576
Query 418 TACGGGCTGGTTGAGACCGACTTTTTCAAAGGATGGCCTAGCCAGTTTCGGATTAACAAA 477
||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||
Sbjct 577 TACGGGCTGGTTGAGACCGACTTTTTCAAAGAATGGCCGAGCCAGTTTCGGATTAACAAA 636
Query 478 TATCATTTTAAACCCGAAACTGTCGGGAAACTCGGTGTGCAATTACACACGGATTCAGGG 537
|||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||
Sbjct 637 TATCATTTTAAACCCGAAACAGTCGGGAAACTCGGTGTGCAACTACACACGGATTCAGGG 696
Query 538 TTCTTGACGATTCTTCAAGATGATGAAAATGTTGGTGGACTTGAAGCTGTGGACAGTTCT 597
|||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||
Sbjct 697 TTCTTGACGATTCTTCAAGATGATGAAAATGTTGGTGGACTTGAAGCTATGGACAATTCT 756
Query 598 TCAGGAACCTTTTTCCCTATAGACCCGTTGCCAAACACACTTGCTATCAACCTCGGGGAC 657
||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||
Sbjct 757 TCAGGAACCTTTTTCCCCATAGACCCGTTGCCAAACACGCTTGCTATCAACCTCGGGGAC 816
Query 658 ATGGCTACGATATGGAGCAATGGAAGATTGTGCACTGTGAAGCATAGAGTGCAATGCAAA 717
|||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||
Sbjct 817 ATGGCTACGATATGGAGCAACGGAAGATTGTGCAATGTGAAGCATAGAGTGCAATGCAAA 876
Query 718 GAAGCAACAATGAGGTATTCTATCGCCTCGTTCTTATTAGGACCAATGAATACAGATTTG 777
|||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||
Sbjct 877 GAAGCAACAATGAGGTATTCCATCGCCTCGTTCTTATTAGGACCAATGGATACAGATTTG 936
Query 778 GAACCTCCAAGTGAGTTTGTGGATGCAGAACATCCGAGATTATACAAGCCTATTAGTCAC 837
|||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||
Sbjct 937 GAACCTCCAAGTGAGTTTGTGGATGCAGAACATCCGCGACTATACAAGCCTATTAGTCAC 996
Query 838 AAAGGGATACGAAATATTAGAATGACCAAAAAATTGCATGATGGAGAAGCTCTCAAGCTT 897
||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 997 GAAGGGGTACGAAATATTAGAATGACTAAAAAATTGCATGATGGAGAAGCTCTCAAGCTT 1056
Query 898 ATAGCTCATGAAGGGA-TAGATAAATGATCTAAAAGGCATTTTAAGATGGTAGCGCTATG 956
||| | |||| ||| | ||||||||||| ||||| |||||||||||||||||||||||||
Sbjct 1057 ATAACCCATGCAGG-ACTAGATAAATGACCTAAATGGCATTTTAAGATGGTAGCGCTATG 1115
Query 957 GAACCTGAAAACTGCAATTTCTTACCTAAGAATGAGAAATAAAGAATGTATTAAAGATGT 1016
|| || |||||| |||||||||||||||||||||||||||||||| ||||||||| ||||
Sbjct 1116 GAGCCAGAAAACAGCAATTTCTTACCTAAGAATGAGAAATAAAGA-TGTATTAAA-ATGT 1173
Query 1017 ATTACCTATTGGATTGTTGCAATATATGAAATTTTTCTACCTAGAGATCTTTGTGGATGA 1076
||||||||||||||||||||||||||||| ||||| ||||| ||||||||||||||||
Sbjct 1174 ATTACCTATTGGATTGTTGCAATATATGATCTTTTT-TACCTTGAGATCTTTGTGGATGC 1232
Query 1077 AATACTACTA 1086
||||||||||
Sbjct 1233 AATACTACTA 1242
> AT1G14120.1 | Symbols: | 2-oxoglutarate (2OG) and Fe(II)-dependent
oxygenase superfamily protein | chr1:4833518-4835089
REVERSE LENGTH=1190
Length=1190
Score = 832 bits (450), Expect = 0.0
Identities = 760/908 (84%), Gaps = 28/908 (3%)
Strand=Plus/Plus
Query 1 ATGGAGGAACTAAATGGAGTCATTCCGACTATAGACTTGAAAGAGGTTTCTGATAAGATT 60
|||| |||| |||||||||||||||| || ||||||||| |||||||| |||| |||||
Sbjct 122 ATGGCGGAAGTAAATGGAGTCATTCCAACAATAGACTTGGAAGAGGTTAATGATCAGATT 181
Query 61 CTGAATCAGAAAATCCGTGAAGCGAGTGAGAGATTGGGATGTTTCAGGGTCATTAACCAT 120
|||||| ||||||||||||||||||||||||||| ||||||||||| ||| || ||||||
Sbjct 182 CTGAATGAGAAAATCCGTGAAGCGAGTGAGAGATGGGGATGTTTCACGGTGATAAACCAT 241
Query 121 GGAGTTTCACTGTCTTTGATGGCTGAGATGAAGAAGACTGTTATTGATCTCTTTCAACGT 180
|||||||| ||||||||||||||||||||||||||||||||| |||||| | |||||
Sbjct 242 GGAGTTTCTTTGTCTTTGATGGCTGAGATGAAGAAGACTGTTAGAGATCTCCATGAACGT 301
Query 181 CCATACGAGGTGAAACTGCGTAACACCGATGTGCTT-CTAGGGAGTGGTTACAGAGC-TC 238
||||| ||| |||||||||| |||||||||||| || ||||||| |||||||| ||| ||
Sbjct 302 CCATATGAGATGAAACTGCGAAACACCGATGTG-TTACTAGGGAATGGTTACA-AGCCTC 359
Query 239 CAAATGAAATCAATCCTTACTATGAAGCATTAGGTCTCTATGATATGGCTTCTCCTCAAG 298
|| ||| ||||||||| |||||| |||| ||||| | ||| ||||| ||||||||||
Sbjct 360 TAAGTGAGTTCAATCCTTTTTATGAATCATTTGGTCTTTTTGACATGGCATCTCCTCAAG 419
Query 299 CTGTCAATACCTTTTGTGACCAACTCGAAGCTTCTGCG-GATCAAAGGGAGATTATGGTA 357
||||||||| |||||||| ||||||| || || || ||||||||||||||| || ||
Sbjct 420 CTGTCAATAGTTTTTGTGATAAACTCGACGCCTC-GCCAGATCAAAGGGAGATTTTGCTA 478
Query 358 AAGTATGCGAAAGCTA-TCAATGGA-CTTGCAACGGATT-TAGTGAGGAGATTAGCAGAG 414
|||||||| ||||||| | | || | ||||| | ||| | ||| ||||||||||| |||
Sbjct 479 AAGTATGCAAAAGCTACTGA-TG-ATCTTGCGA-GGAGTCTAGCAAGGAGATTAGCGGAG 535
Query 415 AGTTACGG-GCTGGTTGAGACCGACTTTTTCAAAGGATGGCCTAGCCAGTTTCGGATTAA 473
|| ||||| | |||| ||| || | ||||| | ||||||||| ||||| |||||||| ||
Sbjct 536 AGCTACGGAG-TGGTAGAGCCCAATTTTTTGAGAGGATGGCCAAGCCAATTTCGGATGAA 594
Query 474 CAAATATCATTTTAAACCCGAAACTGTCGGGAAACTCGGTGTGCA-ATTACACACGGATT 532
|||||||||||||||||| || |||| || |||||||||||| | |||||||||||||
Sbjct 595 CAAATATCATTTTAAACCGGATTCTGTTGGAAAACTCGGTGTG-ATATTACACACGGATC 653
Query 533 CAGGGTTCTTGACGATTCTTCAAGATGATGAAAATGTTGGTGGACTTGAAGCTGTGGACA 592
| || |||||||| |||||||||| |||||| ||||||||||||||||||| ||||||
Sbjct 654 CTGGTTTCTTGACAATTCTTCAAGGTGATGAGGATGTTGGTGGACTTGAAGCCATGGACA 713
Query 593 GTTCTTCAGGAACCTTTTTCCCTATAGACCCGTTGCCAAACACACTTGCTA-TCAACCTC 651
||||||||| |||||||||| ||| || | ||||| ||||| ||| || |||||||
Sbjct 714 ACTCTTCAGGATCCTTTTTCCCCATACACACATTGCCGAACACGCTT-CTTGTCAACCTT 772
Query 652 GGGGACATGGCTACGATATGGAGCAATGGAAGATTGTGCACTGTGAAGCATAGAGTGCAA 711
|| ||||||||||||||||||||||||||||| || |||| |||||||||||||||||||
Sbjct 773 GGTGACATGGCTACGATATGGAGCAATGGAAGGTTATGCAATGTGAAGCATAGAGTGCAA 832
Query 712 TGCAAAGAAGCAACAATGAGGTATT-CTATCGCCTCGTTCTTATTAGGACCAATGAATAC 770
|||| ||| |||| ||||||| ||| |||| || |||||| ||||||||||| || |||
Sbjct 833 TGCATAGAGGCAAAAATGAGG-ATTACTATTGCTTCGTTCCTATTAGGACCAGTGGATAG 891
Query 771 AGAT-TTGGAACCTCCA-AGTGAGTTTGTGGATGCAGAACATCCGAGATTATACAAGCCT 828
|||| ||| || ||||| | ||| ||||||||||| ||||||||| || |||||||||||
Sbjct 892 AGATCTTG-AAGCTCCAGA-TGAATTTGTGGATGCTGAACATCCGCGACTATACAAGCCT 949
Query 829 ATTAGTCACAAAGGGA-TACGAAATATTAGAATGACCAAAAAA-TTGCATGATGGAGAAG 886
|| ||| || ||| | || |||| |||||| | | ||| | || |||| ||| |||
Sbjct 950 ATCAGTGACGGAGG-ACTAAGAAAGATTAGACTTAGCAAGCATCTT-CATGCTGGCGAAT 1007
Query 887 CTCTCAAG 894
||||||||
Sbjct 1008 CTCTCAAG 1015
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 53212577700
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5