BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg471603
Length=1998
Score E
Sequences producing significant alignments: (Bits) Value
AT1G14330.1 | Symbols: | Galactose oxidase/kelch repeat superf... 2337 0.0
AT2G02870.1 | Symbols: | Galactose oxidase/kelch repeat superf... 869 0.0
AT1G26930.1 | Symbols: | Galactose oxidase/kelch repeat superf... 302 1e-80
> AT1G14330.1 | Symbols: | Galactose oxidase/kelch repeat superfamily
protein | chr1:4890118-4892251 REVERSE LENGTH=2134
Length=2134
Score = 2337 bits (1265), Expect = 0.0
Identities = 1564/1704 (92%), Gaps = 37/1704 (2%)
Strand=Plus/Plus
Query 324 tttttATCAATCGATATTTGGATGATCTAATCGTCtttt-tttttttGGGAT-T-TCTCA 380
|||||||||||||| |||||||| ||||||||||||||| ||| | | || | ||||
Sbjct 414 TTTTTATCAATCGAGATTTGGATCATCTAATCGTCTTTTGATTTCTCAGAATCTCTCTC- 472
Query 381 GAAATTCTCTCTC-tttt--ttttCGTGTTTGG--TC-TCTCGATCTTAGATTTCTCTAA 434
|| | | | |||| |||||||||||| || |||||||| | |||||||||||
Sbjct 473 TCTCTTTTAGC-CATTTTGCATTTCGTGTTTGGTCTCGTCTCGATC-T-GATTTCTCTAA 529
Query 435 CATCGGAAATCTGTACGGAGAAGATGGTGGAAGATCGGACATATTTGATCTCGAGGGTTT 494
|||||| |||||||||||||||||||||||||||||||||||||||||| || ||| |||
Sbjct 530 CATCGG-AATCTGTACGGAGAAGATGGTGGAAGATCGGACATATTTGATGTCAAGGATTT 588
Query 495 TCTCAAGTTCTCGTCTTTCAGAATCTAAGTGGCCTTACATGTATCCAGTAGCAGAAGATT 554
||||||||||||||||||||||||| |||||||| |||||||||||| | |||||||||
Sbjct 589 TCTCAAGTTCTCGTCTTTCAGAATCAAAGTGGCCATACATGTATCCACAACCAGAAGATT 648
Query 555 CCTCTGAAACTAAGCTCAGCAATGGCAAAAGATCATT-G-G-ATGATGTTGATGAGCTAA 611
|||||||| |||| |||| ||||||||||||| |||| | | |||||||||||||||| |
Sbjct 649 CCTCTGAATCTAATCTCATCAATGGCAAAAGAGCATTGGAGAATGATGTTGATGAGCTCA 708
Query 612 GACAGAGCAAGTCTCTCAGATTGATGGGATTTTCAATTCAAGGGAATGAAGCTATTGAAG 671
||||||||||||||| |||||||||||||||||||||||| ||||||||||| |||||||
Sbjct 709 GACAGAGCAAGTCTCCCAGATTGATGGGATTTTCAATTCATGGGAATGAAGCCATTGAAG 768
Query 672 -A-A-G---AAGAACAAGACCAATCTGATTCTAACAACAA---TACT---GATGGTGATT 719
| | | ||||||||||||||||||||||||||||||| || | ||||| ||||
Sbjct 769 AAGATGAACAAGAACAAGACCAATCTGATTCTAACAACAATGGTAATAGCGATGGCGATT 828
Query 720 CACTTATCAATGATATTGGCAGGGACAATTCGATAAGCTGTTTGATCCGTTGTTCGAGGT 779
|||||||||||||||||||||| |||||||| |||||||||||||| ||||| |||||||
Sbjct 829 CACTTATCAATGATATTGGCAGAGACAATTCTATAAGCTGTTTGATTCGTTGCTCGAGGT 888
Query 780 CTGATTACGGTTCCATTGCTTCTTTAAACCGGAGTTTTCGGTCTCTGGTGAAGACCGGAG 839
||| ||||||||| |||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 889 CTGGTTACGGTTCGATTGCTTCTTTAAACCGGAGTTTTCGGTCTTTGGTGAAGACCGGAG 948
Query 840 AGATTTATAGACTCAGGAGGCAAAACCAGGTTGTTGAACATTGGGTTTACTTCTCTTGCC 899
||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
Sbjct 949 AGATTTATAGACTCAGGAGGCAAAACCAGATTGTTGAACATTGGGTTTACTTCTCTTGTC 1008
Query 900 AGCTCTTGGAATGGGTTGCTTTCAATCCTGTTGAAAGAAGATGGATGAATTTGCCTACAA 959
|||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 1009 AGCTTTTGGAATGGGTTGCTTTCAATCCTTTTGAAAGAAGATGGATGAATTTGCCTACAA 1068
Query 960 TGCCTTCAGGTGGTACATTCATGTGTGCTGATAAAGAATCGCTCGCTGTTGGTACGGATT 1019
|||||||||||| ||||||||||||||| ||||||||||| | ||||||||||||||||
Sbjct 1069 TGCCTTCAGGTGTTACATTCATGTGTGCCGATAAAGAATCTTTAGCTGTTGGTACGGATT 1128
Query 1020 TGCTTGTTTTAGGCAAAGATGATTACTCTTCTCATGTTATATACAGATACAGTCTTTTGA 1079
||||||| ||||||||||||||||||||||||||||||||||| ||||| ||||||||||
Sbjct 1129 TGCTTGTGTTAGGCAAAGATGATTACTCTTCTCATGTTATATATAGATATAGTCTTTTGA 1188
Query 1080 CTAACTCTTGGTCGTCCGGTATGAGGATGAATTCTCCGAGGTGTTTGTTTGGCTCAGCGA 1139
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1189 CTAACTCTTGGTCTTCCGGTATGAGGATGAATTCTCCGAGGTGTTTGTTTGGCTCAGCGA 1248
Query 1140 GTCTAGGAGAGATTGCGATCTTCGCTGGTGGTTTTGATTCTCTTCGCAATATCAGTGATT 1199
|||||||||||||||||||||| |||||||||||||||||| || |||| ||||||||||
Sbjct 1249 GTCTAGGAGAGATTGCGATCTTTGCTGGTGGTTTTGATTCTTTTGGCAAAATCAGTGATT 1308
Query 1200 CCGCTGAGATGTATAACTCTGAGCTTCAGACTTGGACTACACTTCCGAAGATGAACAAAC 1259
||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||
Sbjct 1309 CCGCTGAGATGTATAACTCCGAGCTTCAGACTTGGACTACACTTCCGAAGATGAATAAAC 1368
Query 1260 CGAGGAGGTTGTGTTCGGGTGTTTTCATGGATGGGAAGTTTTATGTCATTGGAGGAATTG 1319
| |||| | ||||||| ||||||||||||||||||||||| ||||| |||||||||||||
Sbjct 1369 CAAGGAAGATGTGTTCAGGTGTTTTCATGGATGGGAAGTTCTATGTGATTGGAGGAATTG 1428
Query 1320 GAGGAACTGACTCGAAAGTGCTTACTTGCGGTGAGGAGTTCGATTTAGAGACAAAGAAAT 1379
| |||| ||| ||||||||||||||||| ||||||||||| ||||||||||| |||||||
Sbjct 1429 GTGGAAATGATTCGAAAGTGCTTACTTGTGGTGAGGAGTTTGATTTAGAGACGAAGAAAT 1488
Query 1380 GGACTGAGATCCCGGAAATGTCGCCTCCAAGGAGCCGGGAAATGCCAGCAGCAGCAGAGG 1439
|||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 1489 GGACTGAGATACCGGAAATGTCGCCTCCAAGGAGCCGGGAAATGCCGGCAGCAGCAGAGG 1548
Query 1440 CGCCACCTCTTGTTGCGGTTGTGAATAATC-AGTTGTATGCCGCGGATCATGCTGATATG 1498
|||| ||||||||||||||||||||||| | | |||||||| || |||||||||||||||
Sbjct 1549 CGCCGCCTCTTGTTGCGGTTGTGAATAA-CGAATTGTATGCTGCTGATCATGCTGATATG 1607
Query 1499 GAAGTTAGGAAGTATGATAAAGAGAGTAAGAAATGGTTTACTTTAGGGCGATTGCCGGAA 1558
||||| |||||||||||||| ||||||||||||||||||||||||||| ||||||| |||
Sbjct 1608 GAAGTGAGGAAGTATGATAAGGAGAGTAAGAAATGGTTTACTTTAGGGAGATTGCCCGAA 1667
Query 1559 AGAGCTGGCTCGGTTAACGGTTGGGGATTAGCGTTTAGAGCTTGCGGTGAGCGGTTAATT 1618
||||||| ||||||||||||||||||||||||||||||||||||||||||| |||| |||
Sbjct 1668 AGAGCTGACTCGGTTAACGGTTGGGGATTAGCGTTTAGAGCTTGCGGTGAGAGGTTGATT 1727
Query 1619 GTGATTGGTGGTCCTAGAAGTTCAGGTGGAGGGTACATTGAGCTGAATTCCTGGATACCA 1678
||||||||||||||||| ||||||||||||||||||||||| |||||||| |||||||||
Sbjct 1728 GTGATTGGTGGTCCTAGGAGTTCAGGTGGAGGGTACATTGAACTGAATTCATGGATACCA 1787
Query 1679 TCTAGTGATCGAAGTCCACCTCTATGGACATTGCTCGGTAGGAAACATTCATCGAATTTC 1738
||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 1788 TCTAGTGATCGAAGTCCGCCTCTATGGACATTGCTCGGTAGGAAACATTCATCGAATTTT 1847
Query 1739 GTATACAATTGTGCGGTGATGGGTTGCTGATAAA-GGGTTTCAACAATAATTTTCAGATG 1797
|| |||||||| |||||||||||||||||||||| ||||||||||||||| |||||||||
Sbjct 1848 GTTTACAATTGCGCGGTGATGGGTTGCTGATAAAAGGGTTTCAACAATAACTTTCAGATG 1907
Query 1798 ATTTTTAAGATTCTCCTGCCGTTGGAGATGTCGAAAGTTGCAGTCTTTTT---CTTATTT 1854
||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 1908 ATTTTTATGATTCTCCTGCCGTTGGAGATGTCGAAAGTTGCAGTCTTTTTTTTCTTATTA 1967
Query 1855 ATTTTTGTTACAAAAAGAAATTTATTTTCAATTCAATTGGATACGATCATCTTGGTGGTA 1914
||||| |||| |||| ||||||||||| ||||||||||||||| |||||||||||||||
Sbjct 1968 ATTTTGGTTATAAAA-GAAATTTATTTG-AATTCAATTGGATACAATCATCTTGGTGGTA 2025
Query 1915 TTGTTAGATTCTTGGAAAGAACAGAAACTGGTTTTGTAATAAGTTTGGTGGAGAAAGTTC 1974
||||||| |||||||||||||||||||| ||| |||||||||||||||||||||||||||
Sbjct 2026 TTGTTAGTTTCTTGGAAAGAACAGAAACAGGTCTTGTAATAAGTTTGGTGGAGAAAGTTC 2085
Query 1975 AGAATCTAGAGTTTTGCTGTTCTG 1998
||||||||||||||| | ||||||
Sbjct 2086 AGAATCTAGAGTTTTTCAGTTCTG 2109
Score = 222 bits (120), Expect = 9e-57
Identities = 276/341 (81%), Gaps = 52/341 (15%)
Strand=Plus/Plus
Query 1 AGAGTTAAACTTTGAGGCCTGAGGAAACTCATTACGCTTCAC-TCCGATTCGCAGAGAGT 59
|||||| |||||| || ||||||||||||||||||||||||| |||||||||||||||||
Sbjct 16 AGAGTTTAACTTTCAGACCTGAGGAAACTCATTACGCTTCACTTCCGATTCGCAGAGAGT 75
Query 60 TTCC-A-AGA-GAC----G---ACA-A---TT--TCtt-ttttttttt-ttC--T-TATT 98
|||| | ||| || | | | | || |||| ||||||||| ||| | | ||
Sbjct 76 TTCCAACAGACCACAATTGAATAAATATTCTTAATCTTCTTTTTTTTTGTTCTTTCTCTT 135
Query 99 TCGTTAATCCAAATCCGTAAGTActttcttcttc------------------ttattat- 139
|||||||||||||||||||||||||||||||||| |||||||
Sbjct 136 TCGTTAATCCAAATCCGTAAGTACTTTCTTCTTCTTATTATTATTATTATTATTATTATA 195
Query 140 t-atctcttccttgttaaagattctccatttttctctcctccttcttctccATTGAAAGG 198
| |||||||||||||||||||||||||||| ||||||||| |||||||||| | |||||
Sbjct 196 TAATCTCTTCCTTGTTAAAGATTCTCCATTGTTCTCTCCTTCTTCTTCTCCGCT-AAAGG 254
Query 199 AATCATATTCAGATCAGTGATTCGttttttatttcttctgggttttcattttttgttttc 258
||||||||||||||||||||||||||||| || |||||||| ||||||||||||
Sbjct 255 AATCATATTCAGATCAGTGATTCGTTTTT-----CT---GGGTTTTCTTTTTTTGTTTTC 306
Query 259 GG-GTCAAATTTGGAATCTGAAGATCTGACTTTTGAAGCTA 298
| |||||||||||||||| |||||||||||||||||||||
Sbjct 307 CGAGTCAAATTTGGAATCTAAAGATCTGACTTTTGAAGCTA 347
> AT2G02870.1 | Symbols: | Galactose oxidase/kelch repeat superfamily
protein | chr2:837812-840129 FORWARD LENGTH=2190
Length=2190
Score = 869 bits (470), Expect = 0.0
Identities = 880/1073 (82%), Gaps = 47/1073 (4%)
Strand=Plus/Plus
Query 722 CTTATCAATGATATTGGCAGGGACAATTCGATAAG-CTGTTTGATCCGTTGTTCGAGGTC 780
||||||||||| ||||| |||||||||||||| | ||||||||||||||| ||||||||
Sbjct 787 CTTATCAATGAGATTGGGAGGGACAATTCGAT-CGACTGTTTGATCCGTTGCTCGAGGTC 845
Query 781 TGATTACGGTTCCATTGCTTCTTTAAACCGGAGTTTTCGGTCTCTGGTGAAGACCGGAGA 840
|||||| ||||| |||||||| || ||||||| ||| || ||| |||| |||| |||||
Sbjct 846 TGATTATGGTTCTATTGCTTCCTTGAACCGGAATTTCCGTTCTTTGGTAAAGAGTGGAGA 905
Query 841 GATTTATAGACTCAGGAGGCAAAACCAGG-TTGTTGAACATTGGGTTTACTTCTCTTGCC 899
|||||||||| | ||| | ||||| | || ||||||||||||||||||||||||||||||
Sbjct 906 GATTTATAGATTAAGGCGACAAAA-CGGGTTTGTTGAACATTGGGTTTACTTCTCTTGCC 964
Query 900 AGCTCTTGGAATGGGTTGC-TTTCAATCCTGTTGAAAGAAGATGGATGAATTTGCCTACA 958
||||||||||||||||||| ||| | ||||||||| ||||| |||||| | ||||| ||
Sbjct 965 AGCTCTTGGAATGGGTTGCGTTTGA-TCCTGTTGAGAGAAGGTGGATGCAGTTGCCAACT 1023
Query 959 ATGCCTTC-AGGTGGTACATTCATGTGTGCTGATAAAGAATCGCTCGCTGTTGGTACGGA 1017
|||||||| || || ||| ||||||||||| ||||| || || || || ||||| |||||
Sbjct 1024 ATGCCTTCCAG-TGTTACCTTCATGTGTGCAGATAAGGAGTCTCTGGCCGTTGGGACGGA 1082
Query 1018 TTTGCTTGTTTTAGGCAAAGATGATTACTCTTCTCATGTTATATACAGATACAGTCTTTT 1077
||||||| ||||| |||||||||| ||||||||||| ||||||||||||||||| |
Sbjct 1083 CCTGCTTGTCTTAGGAAAAGATGATTTTTCTTCTCATGTAATATACAGATACAGTCTACT 1142
Query 1078 GACTAACTCTTGGTCGTCCGGTATGAGGATGAATTCTCCGAGGTGTTTGTTTGGCTCAGC 1137
||||| |||||||| || ||||||| |||||| |||||||||||||||||||| || ||
Sbjct 1143 CACTAATTCTTGGTCTTCTGGTATGAAGATGAACTCTCCGAGGTGTTTGTTTGGATCCGC 1202
Query 1138 GAGTCTAGGAGAGATTGCGATCTTCGCTGGTGGTTTTGATTCTCTTCGCAATAT-CAGTG 1196
||| || ||||||||||| || ||||||||||| | |||||| | | || || | ||
Sbjct 1203 GAGCCTTGGAGAGATTGCTATATTCGCTGGTGGATGTGATTCCCAGGGAAAGATTCT-TG 1261
Query 1197 ATTCCGCTGAGATGTATAACTCTGAGCTTCAGACTTGGACTA-CACTTCCGAAG-ATGAA 1254
||| || || |||||||| ||||||||||| ||||||| || | ||||| ||| |||||
Sbjct 1262 ATTTTGCGGAAATGTATAATTCTGAGCTTCAAACTTGGA-TAACTCTTCC-AAGGATGAA 1319
Query 1255 CAAACCGAGGAGGTTGTGTTCGGGTGTTTTCATGGATGGGAAGTTTTATGTCATTGGAGG 1314
||||||||||| | |||||||||| ||||| ||||| |||||||| ||||| ||||||||
Sbjct 1320 CAAACCGAGGAAGATGTGTTCGGGAGTTTTTATGGACGGGAAGTTCTATGTAATTGGAGG 1379
Query 1315 AATTGGAGGAACTGACTCGAAAGTGCTT-ACTTGCGGTGAGGAGT-TCGATTTAGAGACA 1372
||| || || |||| || |||| |||| || |||||||| || | | ||||| |||||
Sbjct 1380 AATCGGTGGTGCTGATTCTAAAG-GCTTGACCTGCGGTGAAGAATAT-GATTTGGAGACC 1437
Query 1373 AAGAAATGGACTGAGATCCCGGAAATGTCGCCTCCAAGGAGCCG-G--GA--AA--TGCC 1425
|||||||||||| | ||||| || ||||||||||||| ||||| | || || ||
Sbjct 1438 AAGAAATGGACTCAAATCCCTGACTTGTCGCCTCCAAGAAGCCGTGCTGATCAAGCTGAT 1497
Query 1426 A-G-CAGCAGCAGAGGC-GC-CA-CCTCTTGTTGCGGTTGTGAATAATCAGTTGTATGCC 1480
| | || |||||| || || | ||||||||||||||||||||||| || || || ||
Sbjct 1498 ATGTCACCAGCAGCGGAAGCACCGCCTCTTGTTGCGGTTGTGAATAACCAATTATACGCT 1557
Query 1481 GCGGATCATGCTGATATGGAAGTTAGGAAGTATGATAAAGAGAGTAAGAAATGGTTTACT 1540
|| ||||| || ||||||||||| |||||||| ||||| |||| |||||| ||||| |||
Sbjct 1558 GCTGATCACGCCGATATGGAAGTGAGGAAGTACGATAAGGAGAATAAGAAGTGGTTAACT 1617
Query 1541 -TTAGGGCGATTGCCGGAAAGAGCTGGCTCGGTTAACGGTTGGGGA-TTAGCGTTTAGAG 1598
|| || ||||||| ||||||||||||||||| ||||| |||||| || || |||||||
Sbjct 1618 GTT-GGAAGATTGCCTGAAAGAGCTGGCTCGGTAAACGGATGGGGACTT-GCTTTTAGAG 1675
Query 1599 CTTGCGGTGAGCGGTTAATTGTGATTGGTGGTCCTAGAAGT--TCAGGTGGAGGGTACAT 1656
|||| || |||||||||||||| |||||||| || ||||| ||||| || || | |||
Sbjct 1676 CTTGTGGAGAGCGGTTAATTGTTATTGGTGGACC--GAAGTGCTCAGGAGGTGGTTTCAT 1733
Query 1657 TGAGCTGAATTCCTGGATACCATCTAGTGATCGAAG-TCCACCTCTA-TGGACATTGCTC 1714
||||| ||||| |||||||| || || || | |||||||| | |||||| | ||
Sbjct 1734 AGAGCTAAATTCTTGGATACCG---AGCGA-CGGTGGTCCACCTC-AGTGGACACTACTT 1788
Query 1715 GGTAGGAAACATTCATCGAA-TTTCGTATACAATTGTGCGGTGATGGGTTGCT 1766
| ||||||||||| || | |||||||||||||||||| |||||||||||||
Sbjct 1789 GACAGGAAACATTC-TCCTACTTTCGTATACAATTGTGCAGTGATGGGTTGCT 1840
> AT1G26930.1 | Symbols: | Galactose oxidase/kelch repeat superfamily
protein | chr1:9336057-9337786 REVERSE LENGTH=1547
Length=1547
Score = 302 bits (163), Expect = 1e-80
Identities = 792/1081 (73%), Gaps = 102/1081 (9%)
Strand=Plus/Plus
Query 747 ATTCGATAAGCTGTTTGATCCGTTGTTCGAG-GTCTGATTACGGTTCCATTGCTTCTTTA 805
||||| ||||||||||||| ||||| || || | |||||||| | |||||||||||| |
Sbjct 363 ATTCGTTAAGCTGTTTGATTCGTTGCTCTAGAG-CTGATTACTGCTCCATTGCTTCTGTG 421
Query 806 AACCGGAGTTTTCGGTCTCTG-GT-GAAGACCGGAGAGATTTATAGACTCAGGAGGCAAA 863
|| || || || || ||| || | |||| |||||||||||||||||||||| | |
Sbjct 422 AATCGTAGCTTACGTTCTTTGATTCGAAG--TGGAGAGATTTATAGACTCAGGA-G-ACT 477
Query 864 ACCA-GGTTG-TTGAACATTGGGTTTACTTCTCTTGCCAGCTC-TTGGAATGGGTTGCTT 920
|| | || | |||| ||||||||||| ||||| ||||| ||| | ||||||| ||||
Sbjct 478 ACAAGGGACGCTTGAGCATTGGGTTTATTTCTCGTGCCATCTCAAT-GAATGGGAAGCTT 536
Query 921 TCAATCC-TG-TTGAAAGAAGATGGATGAATTTGCCTACAATGCCTTCAG-GTG-GTACA 976
| |||| | | | || | | |||||| ||||||| | ||||| ||| | ||
Sbjct 537 TTGATCCAAGATCG-AA-ACGGTGGATGCATTTGCCGAGTATGCC-ACAGAACGAGT-GT 592
Query 977 TTCATGTGTGCTGATAAAGAATCGCTCGCTGTTGGTACGGATTTGCTTGT-TTTAGGCAA 1035
|||| || ||| |||||||| || | ||||| || || ||||||||||| ||| ||
Sbjct 593 TTCAGGTATGCAGATAAAGAGTCTTTGGCTGTAGGAACTGATTTGCTTGTGTTT-GGTTG 651
Query 1036 AGATGATTACTCTTCTCATGTTATATACAGATACAGTCTTTTGACTAACTCTTGGTCGTC 1095
|| | | | |||| | || || || ||||||||||||||||||||||||||||| |
Sbjct 652 GGAAG-TGA--GTTCTTACGTAATCTATAGATACAGTCTTTTGACTAACTCTTGGTC-TA 707
Query 1096 C-G-GTATGAGGATGAAT-TCTCCGAGGTGTTTGTTTGGCTCAGCGAGTCTA-GGAGAGA 1151
| | | | ||| ||||| | || || |||||||||||||| || ||| || |||||||
Sbjct 708 CTGCGAA-GAGTATGAACATG-CCTAGATGTTTGTTTGGCTCTGCTAGT-TACGGAGAGA 764
Query 1152 TTGCGATCTTCGCTGGTGGTTTTGATTCTCTTCGCAAT-AT-CAGTGATTCCGCTGAGAT 1209
||||| | || || ||||||| ||||| || | || | |||| | || ||| |
Sbjct 765 TTGCGGTTTTAGCGGGTGGTTGCGATTCGAG-CGGTAGGATTCT-TGATACTGCGGAGTT 822
Query 1210 GTATAACT-CTGAGCTTCAGACTTGGACTACACTT-CC-GAAGATGAACAA-ACCGAGGA 1265
|||||||| | ||| |||||||||| | || || | ||||||||| | |||||
Sbjct 823 GTATAACTAC-GAGGATCAGACTTGGT-TGGTGTTACCCGG-GATGAACAAGAG-GAGGA 878
Query 1266 GGTTGTGTTCGGGTGT-TTTCATGGATGGGAAGTTTTATGTCATTGGAGGAATTGGAG-- 1322
||||||| ||||| ||| |||||||||||||||||||||||||| || ||||| |
Sbjct 879 AAATGTGTTCCGGTGTGTTT-ATGGATGGGAAGTTTTATGTCATTGGTGGGATTGGTGTT 937
Query 1323 G---AACTGACTC-G--AAAGTGCTT--ACTTGCGGTGAGGAGTTCGATTTAGA-GACAA 1373
| || || | | |||| | || ||||| || || ||||| ||||| || ||| |
Sbjct 938 GGGGAAGAGAATGAGCCAAAG-GTTTTGACTTGTGGGGAAGAGTTTGATTT-GAAGACTA 995
Query 1374 AGAAATGGACTGAGATCCCGGAAATGTCGCCTCCAAGG---AGCC-GGG-AA---A-TGC 1424
||||||||| |||||||| || ||||| || || || | || ||| || | ||
Sbjct 996 GGAAATGGACAGAGATCCCTGAGATGTCACCACCGCGGTCTAACCAGGGGAACGGAATGT 1055
Query 1425 CAGCAGCAGCAGA-GGCGCCACCTCTTGTTGCGGTTGTGAATAATCAG-TTGTATGCCGC 1482
| ||||| || || ||| ||||| ||||| |||||||||||| | ||| || ||||| ||
Sbjct 1056 CTGCAGCTGC-GATGGCTCCACCGCTTGTAGCGGTTGTGAATGACCAGCTT-TATGCAGC 1113
Query 1483 GGATCATGCTGATATGGAAGTTAGGAAG-TATGATAAAGAGAGTAA-GAAAT-GGTTTAC 1539
|||||||||| ||||| ||||| ||| ||||||||||||| || | | || ||
Sbjct 1114 TGATCATGCTGGTATGGCGGTTAG-AAGGTATGATAAAGAGA--AACGTGTTTGGAATAA 1170
Query 1540 T-TTAGGGCGA-TTGCCGGAA-AGAGCTGGCTCGGTTAACGGTTGGGGATTAGCGTTTAG 1596
|| ||| | ||||| || | ||| || ||| | ||||||||||| ||||| |||||
Sbjct 1171 AGTT-GGGA-ACTTGCCTGAGCA-AGCGGGTTCGATGAACGGTTGGGGTTTAGCTTTTAG 1227
Query 1597 AGCTTGCGGTGAGCGG-TTAATTGTGATTGGTGGTCCTAGAAGT-TC-AGGTGGAGGGTA 1653
|||||| || || ||| ||| | ||||||||||| || | ||| || ||||| ||| |
Sbjct 1228 AGCTTGTGGGGATCGGATTA-TAGTGATTGGTGGACC-A-AAGGCTCCAGGTGAAGGATT 1284
Query 1654 CATTGAGCTGAATTCCTGGATACCATCTAGTGATCGAAGTCCACCTCTATGGACATTG-C 1712
||||||||| || || ||| ||||| | || | | || | ||| |||| |||| |
Sbjct 1285 CATTGAGCTTAACTCATGGGTACCAAGT-GTTA-C-AA--C-ACCGGAATGG-CATTTAC 1337
Query 1713 TCGGTAGGAAACATTCA-TCGAATTTCGTATACAATTGTGCGGTGATGGGTTGCTGA-TA 1770
| || | |||||| || | |||||||| || ||||| || |||||| |||| ||| ||
Sbjct 1338 TAGGCAAGAAACAGTCGGTT-AATTTCGTGTATAATTGCGCCGTGATGAGTTGTTGAATA 1396
Query 1771 A 1771
|
Sbjct 1397 A 1397
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 98995474740
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5