BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg471645
Length=2318
Score E
Sequences producing significant alignments: (Bits) Value
AT1G14660.1 | Symbols: ATNHX8, NHX8 | Na+/H+ exchanger 8 | chr1... 3688 0.0
AT2G01980.1 | Symbols: SOS1, ATSOS1, ATNHX7 | sodium proton exc... 1535 0.0
> AT1G14660.1 | Symbols: ATNHX8, NHX8 | Na+/H+ exchanger 8 | chr1:5031972-5036448
REVERSE LENGTH=2471
Length=2471
Score = 3688 bits (1997), Expect = 0.0
Identities = 2217/2324 (95%), Gaps = 12/2324 (1%)
Strand=Plus/Plus
Query 1 CTAACGGAGATGACGAGTATAATCGGCGCGACGTTACCGTACAAGTCACCGGAGAAAGCA 60
||| |||||||||||||||||||||||||| |||| |||||||| |||||||||||||||
Sbjct 1 CTACCGGAGATGACGAGTATAATCGGCGCGGCGTTGCCGTACAAATCACCGGAGAAAGCA 60
Query 61 ATTGCATCTTCTTCGTATTCAGCCGAGAACGATTCGAGTCCTGTTGATGCCGTTATTTTC 120
||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||
Sbjct 61 ATTGCATCTTCTTCGTATTCAGCTGAGAACGATTCGAGTCCTGTTGATGCTGTTATTTTC 120
Query 121 GCGGGAACTTCGCTGGTTCTCGGCACCGCCTGTAGACATTTGTTTAACGGCACTAGAGTT 180
||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||
Sbjct 121 GCGGGAACTTCGCTGGTTCTCGGCACCGCTTGTAGATATTTGTTTAACGGCACTAGAGTT 180
Query 181 CCGTACACCGTCGTTCTTCTCGTCATCGGCATTGTTCTCGGATCTCTAGAATATGGAACT 240
||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||
Sbjct 181 CCGTACACCGTCGTTCTTCTCGTCATCGGCATTTTTCTCGGATCCCTAGAATATGGAACT 240
Query 241 AATCATAATCTTGGGAAGCTCGGCCATGGAATCCGTATCTGGAATGATATAAACCCTGAC 300
|| ||||| ||||||||||||||||||||||| ||||||||||||| ||| |||||||||
Sbjct 241 AAGCATAACCTTGGGAAGCTCGGCCATGGAATTCGTATCTGGAATGGTATCAACCCTGAC 300
Query 301 CTACTTTTGGCTGTTTTTCTCCCTGCTCTTCTTTTCGAGAGCTCGTTCTCCATGGATGTG 360
||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||
Sbjct 301 CTACTTTTGGCTGTTTTTCTCCCTGTTCTTCTTTTCGAGAGCTCATTCTCCATGGATGTG 360
Query 361 CACCAGATCAAGAGGTGTATGGTG-CAAATGGTTCTGCTTGCTGGCCCTGGAGTTCTGAT 419
|||||||||||||| ||||||| | |||||||||||||||||||| ||||||||||||||
Sbjct 361 CACCAGATCAAGAGATGTATGG-GACAAATGGTTCTGCTTGCTGGACCTGGAGTTCTGAT 419
Query 420 TTCTACCTTTTGTCTTGGAGCTCTTATAAAGCTCACTTTTCCATATAACTGGGACTGGAA 479
||| ||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 420 TTCCACCTTTTGTCTCGGAGCTCTTATAAAGCTTACTTTTCCATATAACTGGGACTGGAA 479
Query 480 AACATCATTGTTGCTTGGAGGACTTTTAGGAGCTACCGACCCCGTGGCTGTTGTTGCTCT 539
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 480 AACATCATTGTTGCTTGGAGGACTTTTAGGAGCTACCGACCCCGTGGCTGTTGTTGCTTT 539
Query 540 GCTAAAGGAGCTTGGTGCTAGTAAGAAGATGACCACTTTAATTGACGGGGAATCTCTGAT 599
|||||||||||||||||||||||||||||||||||| |||||||| ||||||||||| ||
Sbjct 540 GCTAAAGGAGCTTGGTGCTAGTAAGAAGATGACCACGTTAATTGATGGGGAATCTCTCAT 599
Query 600 GAATGACGGGGTATCGGTAGTGGTTTTCCAGTTATTCTTCAAGATGGTGATGGGGCATAA 659
||| || ||||||||||| |||||||| || |||||||||||||||||||||||||||||
Sbjct 600 GAACGATGGGGTATCGGTTGTGGTTTTTCAATTATTCTTCAAGATGGTGATGGGGCATAA 659
Query 660 CTCTGATTGGGGTTCCATAATCAAATTTCTTGTCCAGAACTCATTTGGAGCTGTAGGCAT 719
|||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||
Sbjct 660 CTCTGATTGGGGTTCCATAATCAAATTTCTTGTCCAAAACTCATTCGGAGCTGTAGGCAT 719
Query 720 TGGTATAGCTTTTGGAATTGCATCAGTTTTTTGGCTTAAATTTATATACAATGACACGGT 779
|||| ||||||||||||||||||||||||||||||||||||| |||| ||||||||||||
Sbjct 720 TGGTCTAGCTTTTGGAATTGCATCAGTTTTTTGGCTTAAATTCATATTCAATGACACGGT 779
Query 780 GG-TGCAGATCACTGTAACACTTTCAGCGAGCTATTTCGCTTATTACACTGCGCAAGAGT 838
|| | ||||||||||||||||||||||||||||||||||| ||||||||||| |||||||
Sbjct 780 GGCT-CAGATCACTGTAACACTTTCAGCGAGCTATTTCGCCTATTACACTGCTCAAGAGT 838
Query 839 GGGCTGGGGTTTCTGGAATTTTGACTGTCATGATTTTGGGGATGTTTTTCGCTGCATTTG 898
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 839 GGGCTGGGGTTTCTGGAATTTTGACTGTCATGATTTTGGGGATGTTTTTCGCTGCATTTG 898
Query 899 CAAGGACATCATTTAAAGGTGACAGTCACCAGAGTCTGCATCACTTCTGGGAAATGGCCG 958
|||||||| | ||||| || ||||||||||||||||||||||||||||||||||||||||
Sbjct 899 CAAGGACAGCTTTTAAGGGGGACAGTCACCAGAGTCTGCATCACTTCTGGGAAATGGCCG 958
Query 959 CTTATATTGCAAATACATTAGTTTTTATACTCAGTGGAGTTATTATTGCTGAAGGCATTC 1018
|||| |||||||||||| |||||||||| ||||||||||||||||| |||||| || |||
Sbjct 959 CTTACATTGCAAATACACTAGTTTTTATGCTCAGTGGAGTTATTATCGCTGAAAGCGTTC 1018
Query 1019 TTAGCGGTCGGGCAATATCTTACAAAGGAAACTCGTGGGGCTTCCTTTTCCTCTTATACT 1078
||||||||| | |||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 1019 TTAGCGGTCAGACAATATCTTACAAAGGAAACTCGTGGAGCTTCCTTTTCCTCTTATACT 1078
Query 1079 TGTATGTCCAACTTTCCCGCTGTGTTGTGGTTGGAGTTCTGTACCCATTGCTATGCCGTT 1138
|||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||
Sbjct 1079 TGTATGTCCAACTTTCCCGCTGTGTTGTTGTTGGAGTTTTGTACCCATTGCTATGCCGTT 1138
Query 1139 TTGGCTATGGCTTGGATTGGAAGGAATCCATCATACTCACGTGGTCTGGATTAAGGGGTG 1198
||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1139 CTGGCTATGGGTTGGATTGGAAGGAATCCATCATACTCACGTGGTCTGGATTAAGGGGTG 1198
Query 1199 CTGTTTCGCTGTCGCTCGCTCTATCTGTAAAACAATCAAGTGGAAATTCATATCTCAGTT 1258
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1199 CTGTTTCGCTGTCGCTCGCTCTATCTGTAAAACAATCAAGTGGAAATTCATATCTCAGTT 1258
Query 1259 CGGATACGGGAACAAGGTTTCTATTCCTCACAGGTGGAATTGTTTTCCTAACTTTGGTTG 1318
| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 1259 CAGATACGGGAACAAGGTTTCTATTCCTCACAGGTGGGATTGTTTTCCTAACTTTGGTTG 1318
Query 1319 TTAATGGATCCACTACCCAATTCCTCTTGCACCTTCTTCGCATGGACACTTTAACGGCCA 1378
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 1319 TTAATGGATCCACTACCCAATTGCTCTTGCACCTTCTTCGCATGGACACTTTAACGGCCA 1378
Query 1379 CTAAGAAACGAATATTGGAGTATACAAAGATTGAAATGATGAAGACCGCTTTAAAAGCTT 1438
||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||
Sbjct 1379 CTAAGAAACGAATATTGGAGTATACAAAGTTTGAAATGATGAAGACTGCTTTAAAAGCTT 1438
Query 1439 TTGAAAATCTAGGAGATGACAAGGAGCTTGGATCTACTGACTGGCCTACAGTTATAAGAC 1498
|||||||||| ||||||||| |||||||||||||| ||||||||||||||||||||||||
Sbjct 1439 TTGAAAATCTTGGAGATGACGAGGAGCTTGGATCTGCTGACTGGCCTACAGTTATAAGAC 1498
Query 1499 ATATTTCAAGCTTGAAAGATTTAGAAGGGAGACAAATTAATCCTCACAATGGGTACGAAG 1558
||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||
Sbjct 1499 ATATTTCAAGCTTGAAAGATTTAGAAGGGAGACAAGTTAATCCTCACGATGGGTACGAAG 1558
Query 1559 CTGGAAGTCTTGACCCTACTAATATAATGGACATACGTATACGCCTCTTAAATGGTGTCC 1618
||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||
Sbjct 1559 CTGGAAGTCTTGACCCTACGAATATAATGGACATACGTATACGCTTCTTAAATGGTGTCC 1618
Query 1619 AGGCAGCTTACTGGGAGATGCTTGATGATAGGAGAATAACACAATGTACTGCCAATGTTT 1678
||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||
Sbjct 1619 AGGCAGCTTACTGGGAGATGCTTGATGATGGGAGAATAACACAATGTACTGCTAATGTTT 1678
Query 1679 TGATGCAATCAGTAGATGAGGCACTTGACCTTGTTTCTACCAGTTCTTTAAGCGACTGGA 1738
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1679 TGATGCAATCAGTAGATGAGGCACTTGACCTTGTTTCTACCAGTTCTTTAAGCGACTGGA 1738
Query 1739 GGGGTTTAGAACCACTTGTTCATTTCCCAAATTACTACAAGTTTCTTCAATCAAAAATTA 1798
||||||||||||| | ||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 1739 GGGGTTTAGAACCGCGTGTTCATTTCCCAAATTACTACAAGTTTCTTCAGTCAAAAATTA 1798
Query 1799 TCCCCCGCAAGTTGGTCACGCATTTGATCGTTGAAAGACTGGAATCTGCTTGTTGCATTT 1858
|||||| |||||| |||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 1799 TCCCCCACAAGTTAGTCACGCATTTGATCGTTGAAAGACTGGAATCTGCTTGTTACATTT 1858
Query 1859 CCTT-TGCATTTCTATGTGCCCATAGGATTGCGCGACAGCAATTGCATGAA-TTCCTAGG 1916
| || ||||||||| |||||||||||||||||||||||||||||||| | || |||||
Sbjct 1859 C-TTCTGCATTTCTCCGTGCCCATAGGATTGCGCGACAGCAATTGCAT-ATCTTTCTAGG 1916
Query 1917 TAACAGTAACATTGCTTCTACTGTAATCAATGAAAGTGAGGTGGAAGGAGATGAAGCAAA 1976
||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 1917 TAACAGTAACATTGCCTCTACTGTAATCAATGAAAGTGAGGTGGAAGGAGAAGAAGCAAA 1976
Query 1977 ACAGTTCTTGGAAGATGTCCGTAATTCATTTCCCCAGGTTTTGAGTGTTTTGAAAACAAG 2036
|||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||
Sbjct 1977 ACAGTTCTTGGAAGATGTCCGTGATTCATTTCCTCAGGTTTTGAGTGTTTTGAAAACAAG 2036
Query 2037 ACAAGTAACACAGTATGTGCTGAATCATCTAAATGGTTATATCAAAAACCTTGAGAAGGT 2096
|||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 2037 ACAAGTAACACATTATGTGCTGAATCATCTAAATGGTTATATTAAAAACCTTGAGAAGGT 2096
Query 2097 TGGGCT-GTTAGAAGGGAAA-GAAGTTTCTCATCTTCAAGATGTTGTTCAGTCTGACTTG 2154
||| || |||||| |||||| ||||||||||||||||| |||||||||||||||||||||
Sbjct 2097 TGG-CTTGTTAGA-GGGAAAAGAAGTTTCTCATCTTCATGATGTTGTTCAGTCTGACTTG 2154
Query 2155 AGGAAGCTCTTGAGAAATCCTCCTTTACTAAAACTTCCAAATATAGACGATCTAATCACC 2214
| ||||||| ||||| ||||||||| |||||||||||||||| |||||||||| ||||||
Sbjct 2155 AAGAAGCTCCTGAGACATCCTCCTTCACTAAAACTTCCAAATGTAGACGATCTGATCACC 2214
Query 2215 AGCAATCCTTTATCGAAAGATCGCTCAAGCTTCAGGAGTTTGGCCATTGGCGAGACAGAT 2274
||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 2215 AGCAATCCTTTATTGAAAGATCGCTCAAGCTTCAGGAGTTTGGCCATTGGCGAAACAGAT 2274
Query 2275 GCATGAACTGAGACTTTAGGTATCCTTGTCAGAATCAAGTAGAG 2318
|||||||||||||||||||||||||||||||||||||| |||||
Sbjct 2275 GCATGAACTGAGACTTTAGGTATCCTTGTCAGAATCAACTAGAG 2318
> AT2G01980.1 | Symbols: SOS1, ATSOS1, ATNHX7 | sodium proton exchanger,
putative (NHX7) (SOS1) | chr2:457010-463326 FORWARD
LENGTH=3682
Length=3682
Score = 1535 bits (831), Expect = 0.0
Identities = 1741/2174 (80%), Gaps = 88/2174 (4%)
Strand=Plus/Plus
Query 100 CCTGTTGATGCCGTTATTTTCG-CGGGAACT-TCGCTGGTTCTCGGCACCGCCTGTAGAC 157
||||| || |||||| | |||| | |||| | || ||||| ||||| | || | ||| |
Sbjct 157 CCTGTCGACGCCGTTCTCTTCGTC-GGAA-TGTCTCTGGTACTCGGTATTGCTTCTAGGC 214
Query 158 ATTTGTTTAACGGCACTAGAGTTCCGTACACCGTCGTTCTTCTCGTCATCGGCATTGTTC 217
| ||| || || ||||| ||||| ||||| |||| ||||||||| ||||| |||| ||
Sbjct 215 ACTTGCTTCGTGGAACTAGGGTTCCTTACACTGTCGCTCTTCTCGTTATCGGAATTGCTC 274
Query 218 TCGGATCTCTAGAATATGGAACTAATCATAATCTTGGGAAGCTCGGCCATGGAATCCGTA 277
| |||||||| ||||||||| |||| ||||| ||||| ||| ||||||||||||| ||||
Sbjct 275 TTGGATCTCTCGAATATGGAGCTAAACATAACCTTGGAAAGATCGGCCATGGAATTCGTA 334
Query 278 TCTGGAATGATATAAACCCTGACCTACTTTTGGCTGTTTTTCTCCCTGCTCTTCTTTTCG 337
|||||||||| || | || || || ||||| ||||||||||| || |||||||||||||
Sbjct 335 TCTGGAATGAGATCGATCCAGAACTTCTTTTAGCTGTTTTTCTTCCGGCTCTTCTTTTCG 394
Query 338 AGAGCTCGTTCTCCATGGATGTGCACCAGATCAAGAGGTGTATGGTG-CAAATGGT-TCT 395
|||| ||||| || ||||| || ||||| || ||||||||| ||| | |||||||| | |
Sbjct 395 AGAGTTCGTTTTCAATGGAAGTTCACCAAATTAAGAGGTGTCTGG-GACAAATGGTGT-T 452
Query 396 GCTTGCTGGCCCTGGAGTTCTGATTTCTACCTTTTGTCTTGGAGCTCTTATAAAGCTCAC 455
||||||| |||||||||||| ||||| || |||||||||| | ||| | ||| ||||
Sbjct 453 ACTTGCTGTCCCTGGAGTTCTTATTTCAACAGCTTGTCTTGGATCGCTTGTGAAGGTCAC 512
Query 456 TTTTCCATAT-AACTGGGACTGGAAAACATCATTGTTGCTTGGAGGACTTTTAGGAGCTA 514
||||| ||| || |||||||||||||| || ||||||||||| ||||||||| | ||||
Sbjct 513 GTTTCCGTATGAA-TGGGACTGGAAAACGTCCTTGTTGCTTGGGGGACTTTTAAGTGCTA 571
Query 515 CCGACCCCGTGGCTGTTGTTGCTCTGCTAAAGGAGCTTGGTGCTAGTAAGAAGATGACCA 574
| || || || |||||||||||| ||||||||||||||||||||||||||||| | | ||
Sbjct 572 CTGATCCGGTTGCTGTTGTTGCTTTGCTAAAGGAGCTTGGTGCTAGTAAGAAGCTAAGCA 631
Query 575 CTTTAATTGACGGGGAATCTCTGATGAATGACGGGGTATCGGTAGTGGTTTTCCAGTTAT 634
| ||||||| |||||||| ||||||||||| ||| || | || |||||||||||||
Sbjct 632 CCATAATTGAAGGGGAATCCCTGATGAATGATGGGACGGCGATTGTTGTTTTCCAGTTAT 691
Query 635 TCTTCAAGATGG-TGATGGGGCATAACTCTGATTGGGGTTCCATAATCAAATTTCTTG-T 692
|||| ||||||| | |||||||| |||||||| ||| |||| |||||||||||||| | |
Sbjct 692 TCTTAAAGATGGCT-ATGGGGCAAAACTCTGACTGGAGTTCTATAATCAAATTTCT-GCT 749
Query 693 CCAGAACTC--ATTTGGAGCTGTAGGCATTGGTATAGCTTTTGGAATTGCATCAGTTTTT 750
| || || | |||||||||||||||||||| | || ||||| |||||||||||| ||
Sbjct 750 T-A-AAGTCGCACTTGGAGCTGTAGGCATTGGTCTGGCGTTTGGCATTGCATCAGTTATT 807
Query 751 TGGCTTAAATTTATATACAATGACACGGTGGT-GCAGATCACTGTAACACTTTCAGCGAG 809
||||| || || |||| ||||||||| || | | |||| ||| | ||| || ||| |||
Sbjct 808 TGGCTCAAGTTCATATTCAATGACACTGTAATAG-AGATTACTCTTACAATTGCAGTGAG 866
Query 810 CTATTTCGCTTATTACACTGCGCAAGAGTGGGCTGGGGTTTCTGGAATTTTGACTGTCAT 869
||||||||| || |||||||| |||||||||||||||| |||||| ||||||| |||||
Sbjct 867 CTATTTCGCATACTACACTGCTCAAGAGTGGGCTGGGGCTTCTGGTGTTTTGACGGTCAT 926
Query 870 GATTTTGGGGATGTTTT-TCGCTGCATTTGCAAGGACATCATTTAAAGGTGACAGTCACC 928
|| |||||| ||||||| | |||||||||||||||||| | |||||||||||||||||
Sbjct 927 GACTTTGGGCATGTTTTAT-GCTGCATTTGCAAGGACAGCCTTTAAAGGTGACAGTCAAA 985
Query 929 AGAGTCT-GCATCACTTCTGGGAAATGGCCGCTTATATTGCAAATACATTAGTT-TTTAT 986
| || || |||||||||||||||||||| || ||||||||||| || || | | |||||
Sbjct 986 AAAG-CTTGCATCACTTCTGGGAAATGGTTGCATATATTGCAAACACTTT-GATATTTAT 1043
Query 987 ACTCAGTGGAGTTATTATTGCTGAAGGCATTCTT-AGCGGTCGGGCAATAT--CTTACAA 1043
|||||||| ||| | ||||||||||||||||| | | || | || || | ||| |
Sbjct 1044 CCTCAGTGGTGTTGTCATTGCTGAAGGCATTCTCGA-CAGT-GAT-AAGATTGCCTACCA 1100
Query 1044 AGGAAACTCGTGGGGCTTCCTTTTCCT-CTTATAC-TTGTATGTCCAACTTTCCCGCTGT 1101
||| || || ||| | || ||||| || || |||| || || ||||||| || || |||
Sbjct 1101 AGGGAATTCATGGCGATTTCTTTTTCTGCT-ATACGTT-TACATCCAACTATCGCG-TGT 1157
Query 1102 -GTTGTGGTTGGAGTTCTGTACCCA-TTGCTATGCCGTTTTGGCTATGGCTTGGATTGGA 1159
||||| ||||||||||| || ||| || |||| |||||||||||||| ||||||||||
Sbjct 1158 TGTTGTTGTTGGAGTTCTATATCCACTTT-TATGTCGTTTTGGCTATGGTTTGGATTGGA 1216
Query 1160 AGGAATCCATCATACTCACGTGGTCTGGATTAAGGGGTGCTGTTTCGCT-GTCGCTCGCT 1218
| |||||||| |||||| |||||||| || ||||| || || | || | | || ||
Sbjct 1217 AAGAATCCATTATACTCGTATGGTCTGGTTTGAGGGGCGCAGTGGCTCTTG-CACTTTCT 1275
Query 1219 CTATCTGTAAAACAATCAAGTGGAAATTCATATCTCAGTTCGGATACGGGAACAAGGTTT 1278
|||| || || |||||||| ||||||||| || |||| ||| || |||||| ||||
Sbjct 1276 TTATCCGTGAAGCAATCAAGCGGAAATTCACATATCAGCAAGGAGACTGGAACATTGTTT 1335
Query 1279 CTATTCCTCACAGGTGGAATTGTTTTCCTAACTTTGGTTGTTAATGGATCCACTACCCAA 1338
|| ||| |||| ||||||||||| ||||||||| || | |||||||||||||||||||||
Sbjct 1336 CTTTTCTTCACGGGTGGAATTGTGTTCCTAACTCTGATAGTTAATGGATCCACTACCCAA 1395
Query 1339 TTCCT-CTTGCACCTTCTTCGCATGGACACTTTAACGGCCACTAAGAAACGAATATTGGA 1397
|| | || | ||||||||||||||| | |||| | ||| | |||||||||||||||||
Sbjct 1396 TTTGTTCTA-CGCCTTCTTCGCATGGATATTTTACCAGCCCCCAAGAAACGAATATTGGA 1454
Query 1398 GTATACAAAG-ATTGAAATGATGAAGACCGCTTTAAAAGCTTTTGAAAATCTAGGAGATG 1456
||||||||| | |||||| |||| | || ||| ||| ||| || |||||||||| |
Sbjct 1455 ATATACAAAGTAC-GAAATGTTGAATAAGGCCTTACGAGCGTTTCAAGATCTAGGAGACG 1513
Query 1457 ACAAGGAGCTTGGATCTACTGACTGGCCTACAGTT-ATAAGACATATTTCAAGCTTGAAA 1515
| ||||||| ||| || ||||||||||||||||| | ||| ||||||||||| | |||
Sbjct 1514 ATGAGGAGCTAGGACCTGCTGACTGGCCTACAGTTGA-AAGTTATATTTCAAGCCTAAAA 1572
Query 1516 GATTTAGAAGGGAGA-CAAATT-A--ATCCTCACAATGGGTACGAAGCT-GGAAGTCTTG 1570
| || ||||||| || | | || | ||||||||||||| | | || | ||||||||||
Sbjct 1573 GGTTCAGAAGGG-GAACTAGTTCATCATCCTCACAATGGCT-CTAAAATTGGAAGTCTTG 1630
Query 1571 ACCCTACTAA-TATAATGGACATACGTATACGCCTCTTAAATGGTGTCCAGGCAGCTTAC 1629
|||||| || | ||| |||||||||||| || ||||||||||||| || ||| |||||
Sbjct 1631 ACCCTAA-AAGTTTAAAGGACATACGTATGCGGTTCTTAAATGGTGTGCAAGCAACTTAC 1689
Query 1630 TGGGAGATGCTTGATGATAGG-AGAATAACACAATGT-ACTGCCAATGTTTTGATGCAAT 1687
||||||||||||||||| || |||||| | || || ||||| ||| |||||||||| |
Sbjct 1690 TGGGAGATGCTTGATGAG-GGCAGAATATCTGAA-GTTACTGCTAATATTTTGATGCAGT 1747
Query 1688 CAGTAGATGAGGCACTTGACCTTGTTTCTACCAGTTCTTTAAGCGACTGGAGGGGTTTAG 1747
|||| |||||||| ||||| | |||||||| | ||||| | || ||||| ||| ||
Sbjct 1748 CAGTGGATGAGGCGCTTGATCAGGTTTCTACAA---CTTTATGTGATTGGAGAGGTCTAA 1804
Query 1748 AACCACTTGTTCA-TTTCCCAAATTACTACAAGTTTCTTCAATCAAAAATTATCCCCCGC 1806
|||||| ||| || |||||||||||||||||| |||||||| || ||| || |||| |||
Sbjct 1805 AACCACATGT-CAATTTCCCAAATTACTACAACTTTCTTCATTCTAAAGTTGTCCCACGC 1863
Query 1807 AAGTTGGTCACGCA-TTTGATCGTTGAAAGACTGGAATCTGCTTGTTGCATTTCCTT-TG 1864
||||||||||| | |||| | || |||||||| ||||||||||| | |||||| | ||
Sbjct 1864 AAGTTGGTCACATACTTTGCT-GTCGAAAGACTAGAATCTGCTTGCTACATTTC-TGCTG 1921
Query 1865 CATTTCTAT-GTGCCCATAGGATTGCGCGACAGCAATTGCATGAATTCCTAGGTAACAGT 1923
| ||||| | | || |||| ||||| |||||||||||| |||| || ||||| | |||
Sbjct 1922 CGTTTCT-TCGCGCACATACAATTGCACGACAGCAATTGTATGATTTTCTAGGGGAGAGT 1980
Query 1924 AACATTGCTTCTACTGTAATCAATGAAAGTGAGGTGGAAGGAGATGAAGCAAAACAGTTC 1983
|| |||| ||| | |||||||||||||||||| ||||||||| ||||||||| |||||
Sbjct 1981 AATATTGGTTCCATTGTAATCAATGAAAGTGAAAAGGAAGGAGAGGAAGCAAAAAAGTTC 2040
Query 1984 TTGGAAGATGTCCG-TAATTCATTTCCCCAGGTTTTGAGTGTTTTGAAAACAAGACAAGT 2042
|||||| | ||||| | ||||||||| |||||| | ||||| ||||||||| ||||||
Sbjct 2041 TTGGAAAAAGTCCGATC-TTCATTTCCTCAGGTTCTCCGTGTTGTGAAAACAAAACAAGT 2099
Query 2043 AACACAGT-ATGTGCTGAATCATCTAAAT-GGTTATATCAAAAACCTTGAGAAGGTTGGG 2100
|||| | | | ||| |||||||| || | ||||| || ||||||| |||||||||||
Sbjct 2100 AACATATTCA-GTGTTGAATCATTTAC-TCGGTTACATTGAAAACCTCGAGAAGGTTGG- 2156
Query 2101 CT-GTTAGAAGGGAAA-GAAGTTTCTCATCTTCAAGATGTTGTTCAGTCTGACTTGAGGA 2158
|| ||| || || ||| ||| | |||||||||| |||| ||| ||| | | ||||| |
Sbjct 2157 CTTGTTGGA-GGAAAAAGAAATCGCTCATCTTCATGATGCTGTCCAGACCGGCTTGAAAA 2215
Query 2159 AGCTCTTGAGAAATCCTCCTTTACTAAAACTTCCAAATATAGA-CGATC-TAATCACCAG 2216
|||| |||||||| ||||| || | ||||||||||| || || ||| | | ||||||
Sbjct 2216 AGCTTTTGAGAAACCCTCCAATAGTTAAACTTCCAAA-ATTGAGCGA-CATGATCACCT- 2272
Query 2217 CA-ATCCTTTATCG 2229
|| |||| ||||||
Sbjct 2273 CACATCCGTTATCG 2286
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 115059649140
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5