BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg471664 Length=460 Score E Sequences producing significant alignments: (Bits) Value AT1G14755.1 | Symbols: | S locus-related glycoprotein 1 (SLR1)... 453 6e-127 > AT1G14755.1 | Symbols: | S locus-related glycoprotein 1 (SLR1) binding pollen coat protein family | chr1:5083742-5084342 FORWARD LENGTH=504 Length=504 Score = 453 bits (245), Expect = 6e-127 Identities = 275/290 (95%), Gaps = 0/290 (0%) Strand=Plus/Plus Query 1 aaaaaaaaaaCATAAAACCATGAGAAACCTCGTAAATTTCGCTGTTCTTTTCATGGCCAT 60 ||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| |||| Sbjct 5 AAAAAAAAAACATAAAACCATGAGAAACCTCATAAATTTCGCTGTTCTTATCATGACCAT 64 Query 61 CTTCATAGTTTCAGCCTCAGGTGCGAGAGAGACGAGAATGATGGAACAAACTTGCCCCGT 120 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 65 CTTCATCGTTTCAGCCTCAGGTGCGAGAGAGACGAGAATGATGGAACAAACTTGCCCCGT 124 Query 121 TTTCTGGCCAATGGTTCCATGCGATGCTAAAAAATGCGACCAAATGTGTCGCGATTATTA 180 |||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||| Sbjct 125 TTTCTGGCCAATGGTTCCATGCGATGCTAACAAATGCGAACAAATGTGTCGCGATTATTA 184 Query 181 CGGTCCTGTTCCCTCTTACTGTAATAGAATCGGAGCTCCAAACGCTGAATGTGCATGTAG 240 |||| ||||||||||||||||||||||||||||| |||||| |||||||| || ||||| Sbjct 185 CGGTTCTGTTCCCTCTTACTGTAATAGAATCGGAACTCCAATTGCTGAATGCGCCTGTAG 244 Query 241 TCTTACACCATGTTAATGACGCAAAGGCTTTCTCAAGGATATATTAAGCT 290 |||||||||||||||||||| |||||||||| |||||||||| ||||||| Sbjct 245 TCTTACACCATGTTAATGACCCAAAGGCTTTTTCAAGGATATTTTAAGCT 294 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 21916738564 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5