BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg471706
Length=1612
Score E
Sequences producing significant alignments: (Bits) Value
AT1G15150.1 | Symbols: | MATE efflux family protein | chr1:521... 2241 0.0
AT1G15160.1 | Symbols: | MATE efflux family protein | chr1:521... 2189 0.0
AT1G15180.1 | Symbols: | MATE efflux family protein | chr1:522... 1748 0.0
AT1G15170.1 | Symbols: | MATE efflux family protein | chr1:522... 1714 0.0
> AT1G15150.1 | Symbols: | MATE efflux family protein | chr1:5212615-5214858
FORWARD LENGTH=1658
Length=1658
Score = 2241 bits (1213), Expect = 0.0
Identities = 1486/1618 (92%), Gaps = 17/1618 (1%)
Strand=Plus/Plus
Query 1 CACCACTTTCAGTTTCAAATCTCAActctctctctctctctctAGCCATGCAAAACGCAC 60
|||||||||| ||||||| | |||| ||||||||| | |||||||||| ||||
Sbjct 18 CACCACTTTCCGTTTCAACTTTCAA-----ACTCTCTCTCACAAGCCATGCAAGACGCGG 72
Query 61 AGAGCTCCACCACA-GATCCGGTAGACAGAGTTGATAAAGTGACATGGAGAGATCTGCAA 119
|||| |||||| | ||||||||||||||| |||| ||||||||||||||||||||||||
Sbjct 73 AGAGAACCACCA-ATGATCCGGTAGACAGAATTGAGAAAGTGACATGGAGAGATCTGCAA 131
Query 120 GATGGATCTTTCACCGCAGAACTCAAGAGGCTTCTCTGCTTTGCGGCTCCTATGGTTGCC 179
|| |||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||
Sbjct 132 GACGGATCTTTCACCGCAGAACTCAAGAGGCTTATCTGCTTTGCGGCTCCTATGGCTGCC 191
Query 180 GTGGTTATCACTCAGTCCATGCTACAGATCATAACAATGGTGATGGTGGGACACCTCGGT 239
|||||||||| ||||| |||| ||||||| || |||||||||||||||| |||||||||
Sbjct 192 GTGGTTATCATTCAGTTCATGATACAGATAATCTCAATGGTGATGGTGGGTCACCTCGGT 251
Query 240 A-ATCTTTCCCTCGCTAGCGCTTCCTTCGCCA-TCTCCTTCTCTAACGTCACTGGCTTCA 297
| | || |||||||||||||||||||||| || ||||||||| |||||||||||||||||
Sbjct 252 AGA-CTCTCCCTCGCTAGCGCTTCCTTCG-CAGTCTCCTTCTGTAACGTCACTGGCTTCA 309
Query 298 GCTTCATTATGGGATTGTCATCTGCCTTAGATACTCTCAGCGGTCAAGCCTATGGAGCTA 357
|||||||||| |||||||||| ||||||||||||| | || |||||||| ||||||||||
Sbjct 310 GCTTCATTATAGGATTGTCATGTGCCTTAGATACTTTGAGTGGTCAAGCTTATGGAGCTA 369
Query 358 AGCTATATCGGAAACTAGGTGTTCAAACTTACACGGCTATGTTCTGTCTTACATTAGTTT 417
||||||||||||||||||||||||| ||||||| ||||||||||||||||| ||||| |
Sbjct 370 AGCTATATCGGAAACTAGGTGTTCAGGCTTACACAGCTATGTTCTGTCTTACTTTAGTGT 429
Query 418 GTCTCCCTATCTCTCTCCTATGGTTCAACATGGGAAAGCTTCTCGTGATCCTTGGCCAAG 477
|||||||| |||||||||||||||||||||||||||||||| | ||||||||||||||||
Sbjct 430 GTCTCCCTCTCTCTCTCCTATGGTTCAACATGGGAAAGCTTATTGTGATCCTTGGCCAAG 489
Query 478 ACCCTTCAATTGCACACGAAGCAGGAAGATTTGCTGCTTGGCTCATCCCTGGACTGTTTG 537
||||| | ||||| |||||||| || |||| ||| |||||||||||||| |||||||| |
Sbjct 490 ACCCTGCTATTGCTCACGAAGCTGGTAGATATGCCGCTTGGCTCATCCCAGGACTGTTCG 549
Query 538 CTTACGCCGTTCTACAGCCGCTCATTCGCTACTTCAAAAACCAGAGCTTGATCACACCTC 597
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 550 CTTACGCCGTTCTTCAGCCGCTCATTCGCTACTTCAAAAACCAGAGCTTGATCACACCTC 609
Query 598 TCTTCATCACCTCTTGTGTTGTGTTCTGTCTCCATGTTCCTCTTTGCTGGATTTTGGTTT 657
|| || ||||||||| ||||||||| ||| |||| |||||||| |||||| |||||||||
Sbjct 610 TCCTCGTCACCTCTTCTGTTGTGTTTTGTATCCACGTTCCTCTCTGCTGGCTTTTGGTTT 669
Query 658 ATAAGTCAGGGCATGGTCATCTTGGAGGAGCCTTGGCTCTCAGTTTATCGTACTGGGTTT 717
|||||||||||| ||||||| |||||||||||||||||||||| || || |||||| | |
Sbjct 670 ATAAGTCAGGGCTTGGTCATATTGGAGGAGCCTTGGCTCTCAGCTTGTCATACTGGCTCT 729
Query 718 CTGCCAGTTTT-CTTGGATCTTTCATGTACTACTCCTCTGCCTGTTCTGAGACACGCGCC 776
||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 730 ATGCCA-TTTTCCTTGGATCTTTCATGTACTACTCCTCTGCCTGTTCTGAGACACGCGCG 788
Query 777 CCGCTCT-CCATGGAGATATTCGACGGCATTGGAGAGTTCT-TCAAATATGCTCTTCCTT 834
||||| | |||||||||||||||| ||| || ||||||| | ||||||||||||||||||
Sbjct 789 CCGCT-TACCATGGAGATATTCGAGGGCGTTAGAGAGTT-TATCAAATATGCTCTTCCTT 846
Query 835 CTGCGGCTATGCTTTGTCTAGAGTGGTGGTCATATGAACTCGTAATATTACTCTCTGGGC 894
|||||||||||||||| || ||||||||||||||||||||| |||||||||| ||||| |
Sbjct 847 CTGCGGCTATGCTTTGCCTGGAGTGGTGGTCATATGAACTCATAATATTACTTTCTGGTC 906
Query 895 TCTTACCCAACCCACAGCTGGAGACTTCTGTGCTCTCTGTCTGTCTCCAAACACTTTCGA 954
| |||||||||||||||||||||||||||||||||||| ||||| || |||||||||| |
Sbjct 907 TGTTACCCAACCCACAGCTGGAGACTTCTGTGCTCTCTATCTGTTTCGAAACACTTTCAA 966
Query 955 TAGCTTATTCAATACCACTAGCGATCGCGGCTGCAGCAAGCACAAGAATCTCAAATGAAT 1014
|| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 967 TAACTTATTCAATACCACTAGCGATCGCGGCTGCAGCAAGCACAAGAATCTCAAATGAGT 1026
Query 1015 TAGGTGCTGGAAACTCTCGAGCAGCACATATTGTGGTCTACGCGGCAATGTCTCTTGCAG 1074
|||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 1027 TAGGAGCTGGAAACTCTCGAGCAGCACATATTGTGGTCTATGCGGCAATGTCTCTTGCAG 1086
Query 1075 TAATGGATGCATTGATGGTGAGTACATCTCTATTAGTCGGCAGGAATCTTTTCGGCCATG 1134
|||||||||||||||||||||||| |||||||||| ||||||| || ||||||||||||
Sbjct 1087 TAATGGATGCATTGATGGTGAGTATGTCTCTATTAGCCGGCAGGCATGTTTTCGGCCATG 1146
Query 1135 TTTTCAGTAGTGACAAGAAAACCATCGACTATGTTGCAAAGATGGCTCCATTGGTCTCTA 1194
||||||| |||||||||||||||||||| |||||||||||||||||||| ||||||||||
Sbjct 1147 TTTTCAGCAGTGACAAGAAAACCATCGAATATGTTGCAAAGATGGCTCCGTTGGTCTCTA 1206
Query 1195 TTTCTCTCATACTGGACAGTTTACAAGGGGTTTTCTCAGGTGTTGCAAGCGGATGCGGGT 1254
||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 1207 TTTCTATCATACTGGACAGTTTACAAGGGGTTCTCTCAGGTGTTGCAAGCGGATGCGGGT 1266
Query 1255 GGCAGCATATAGGGGCTTACATAAACTTTGGAGCTTTCTATCTCTGGGGGATACCCATTG 1314
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 1267 GGCAGCATATAGGGGCTTACATAAACTTCGGAGCTTTCTATCTCTGGGGGATACCCATTG 1326
Query 1315 CTGCATCTTTAGCCTTCTGGGTTCATCTGAAAGGTGTTGGCCTTTGGATTGGAATACTAG 1374
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1327 CAGCATCTTTAGCCTTCTGGGTTCATCTGAAAGGTGTTGGCCTTTGGATTGGAATACTAG 1386
Query 1375 CTGGTGCCGTTCTGCAAACTCTTCTACTGGCTCTTTTCACAGGCTGTACAAACTGGAAAA 1434
| ||||| |||||||| |||||||| ||||||||| |||||||||| |||||||||||||
Sbjct 1387 CCGGTGCAGTTCTGCAGACTCTTCTGCTGGCTCTTGTCACAGGCTGCACAAACTGGAAAA 1446
Query 1435 ACCAGGCCCGTGAAGCGAGGAAGCGAATGGCTGTGGCCCATGAATCAGAACTTACAGAGT 1494
||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 1447 CCCAGGCCCGTGAAGCGAGGGAGCGAATGGCTGTGGCCCATGAATCAGAACTTACAGAGT 1506
Query 1495 CAGAACTTCCCTTATAAGATTACGGGGGCACAGATGTTCCTCAGGTTTTACCATTTTGGT 1554
||||||||||| | ||||||||| ||| |||||||||||||| |||||||||||| ||
Sbjct 1507 CAGAACTTCCCATCTAAGATTACAGGGACACAGATGTTCCTCCTATTTTACCATTTTTGT 1566
Query 1555 AGCAGCCAAATCGTTGTATGTTACTGCTTGACTAGTGGTAGCCGTGAATAATCGGTCT 1612
||||||||||||||| |||||||||||| |||||||||| |||||||||||| |||||
Sbjct 1567 AGCAGCCAAATCGTTATATGTTACTGCTGGACTAGTGGTTGCCGTGAATAATTGGTCT 1624
> AT1G15160.1 | Symbols: | MATE efflux family protein | chr1:5215475-5217545
FORWARD LENGTH=1464
Length=1464
Score = 2189 bits (1185), Expect = 0.0
Identities = 1378/1471 (94%), Gaps = 14/1471 (1%)
Strand=Plus/Plus
Query 48 ATGCAAAACGCACAGAGCTCCACCACAGATCCGGTAGACAGAGTTGATAAAGTGACATGG 107
||| || ||||| ||||| |||||| |||||| |||||||||||||| ||||| ||||||
Sbjct 1 ATGGAAGACGCAGAGAGCACCACCAAAGATCCTGTAGACAGAGTTGAGAAAGTAACATGG 60
Query 108 AGAGATCTGCAAGATGGATCTTTCACCGCAGAACTCAAGAGGCTTCTCTGCTTTGCGGCT 167
|||||||||||||| ||||||||||||||||||||||||| |||| | ||||||||||||
Sbjct 61 AGAGATCTGCAAGACGGATCTTTCACCGCAGAACTCAAGAAGCTTATATGCTTTGCGGCT 120
Query 168 CCTATGGTTGCCGTGGTTATCACTCAGTCCATGCTACAGATCATAACAATGGTGATGGTG 227
||||||| ||||||||||||||||||||||||| |||||||||||||||||||||| |||
Sbjct 121 CCTATGGCTGCCGTGGTTATCACTCAGTCCATGTTACAGATCATAACAATGGTGATTGTG 180
Query 228 GGACACCTCGGTA-ATCTTTCCCTCGCTAGCGCTTCCTTCGCCATCTCCTTCTCTAACGT 286
|| |||||||| | | || || ||||||||||||||||||||||||||||||| ||||||
Sbjct 181 GGTCACCTCGGCAGA-CTCTCTCTCGCTAGCGCTTCCTTCGCCATCTCCTTCTGTAACGT 239
Query 287 CACTGGCTTCAGCTTCATTATGGGATTGTCATCTGCCTTAGATACTCTCAGCGGTCAAGC 346
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 240 CACTGGCTTCAGCTTCATTATGGGATTGTCATGTGCCTTAGATACTCTCAGCGGTCAAGC 299
Query 347 CTATGGAGCTAAGCTATATCGGAAACTAGGTGTTCAAACTTACACGGCTATGTTCTGTCT 406
|||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||
Sbjct 300 CTATGGAGCTAAGCTATATCGGAAACTAGGTGTTCAGGCTTACACAGCTATGTTCTGTCT 359
Query 407 TACATTAGTTTGTCTCCCTATCTCTCTCCTATGGTTCAACATGGGAAAGCTTCTCGTGAT 466
||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 360 TACATTAGTGTGTCTCCCTCTCTCTCTCCTATGGTTCAACATGGGAAAGCTTCTCGTGAT 419
Query 467 CCTTGGCCAAGACCCTTCAATTGCACACGAAGCAGGAAGATTTGCTGCTTGGCTCATCCC 526
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 420 CCTTGGCCAAGACCCTTCAATTGCACACGAAGCCGGAAGATTTGCTGCTTGGCTCATCCC 479
Query 527 TGGACTGTTTGCTTACGCCGTTCTACAGCCGCTCATTCGCTACTTCAAAAACCAGAGCTT 586
||||||||||||||||| |||||||||||||| | ||||||||||||||||||||||||
Sbjct 480 AGGACTGTTTGCTTACGCTGTTCTACAGCCGCTTACTCGCTACTTCAAAAACCAGAGCTT 539
Query 587 GATCACACCTCT-CTTCATCACCTCTTGTGTTGTGTTCTGTCTCCATGTTCCTCTTTGCT 645
||| |||||||| ||| ||||||||||||||||||||||||||||||||||||||||| |
Sbjct 540 GATAACACCTCTCCTT-ATCACCTCTTGTGTTGTGTTCTGTCTCCATGTTCCTCTTTGTT 598
Query 646 GGATTTTGGTTTATAAGTCAGGGCATGGTCATCTTGGAGGAGCCTTGGCTCTCAGTTTAT 705
|| ||||||||||||||||||||| || |||| ||||||||||||||||||||||||| |
Sbjct 599 GGCTTTTGGTTTATAAGTCAGGGCTTGATCATATTGGAGGAGCCTTGGCTCTCAGTTTGT 658
Query 706 CGTACTGGGTTTCTGCCAGT-TTTCTTGGATCTTTCATGTACTACTCCTCTGCCTGTTCT 764
| |||||| | | ||||| | |||||||||||||||||||||| ||||||||| ||||||
Sbjct 659 CATACTGGCTCTATGCCA-TCTTTCTTGGATCTTTCATGTACTTCTCCTCTGCTTGTTCT 717
Query 765 GAGACACGCGCCCCGCTCT-CCATGGAGATATTCGACGGCATTGGAGAGTTCT-TCAAAT 822
|||||||| || ||||| | |||||||||||||||| ||| || ||||||| | ||||||
Sbjct 718 GAGACACGTGCACCGCT-TACCATGGAGATATTCGAGGGCGTTAGAGAGTT-TATCAAAT 775
Query 823 ATGCTCTTCCTTCTGCGGCTATGCTTTGTCTAGAGTGGTGGTCATATGAACTCGTAATAT 882
|||||||||||||||||||||||||||| |||||||||||||| ||||||||| ||||||
Sbjct 776 ATGCTCTTCCTTCTGCGGCTATGCTTTGCCTAGAGTGGTGGTCTTATGAACTCATAATAT 835
Query 883 TACTCTCTGGGCTCTTACCCAACCCACAGCTGGAGACTTCTGTGCTCTCTGTCTGTCTCC 942
|||| ||||| ||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 836 TACTATCTGGTCTCTTACCCAACCCACAACTGGAGACTTCTGTGCTCTCTGTCTGTCTCC 895
Query 943 AAACACTTTCGATAG-CTTATTCAATACCACTAGCGATCGCGGCTGCAGCAAGCACAAGA 1001
||||||||||||| | ||||||| |||||||||||||| || ||||||||||||||||||
Sbjct 896 AAACACTTTCGAT-GACTTATTCGATACCACTAGCGATTGCAGCTGCAGCAAGCACAAGA 954
Query 1002 ATCTCAAATGAATTAGGTGCTGGAAACTCTCGAGCAGCACATATTGTGGTCTACGCGGCA 1061
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 955 ATCTCAAATGAATTAGGTGCTGGAAACTCTCGAGCAGCACATATTGTGGTCTACGCGGCA 1014
Query 1062 ATGTCTCTTGCAGTAATGGATGCATTGATGGTGAGTACATCTCTATTAGTC-GGCAGGAA 1120
||||||||||||||| ||||||||||||||||| |||| |||||||||| | || | |||
Sbjct 1015 ATGTCTCTTGCAGTAGTGGATGCATTGATGGTGGGTACGTCTCTATTAG-CTGGTAAGAA 1073
Query 1121 TCTTTTCGGCCATGTTTTCAGTAGTGACAAGAAAACCATCGACTATGTTGCAAAGATGGC 1180
||| || ||||| |||||||| ||||||||||| ||||||||||||||||||||||||||
Sbjct 1074 TCTGTTGGGCCAAGTTTTCAGCAGTGACAAGAATACCATCGACTATGTTGCAAAGATGGC 1133
Query 1181 TCCATTGGTCTCTATTTCTCTCATACTGGACAGTTTACAAGGGGTTTTCTCAGGTGTTGC 1240
|||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 1134 TCCACTGGTCTCTATTTCTCTCATACTGGACAGTTTACAAGGGGTTCTCTCAGGTGTTGC 1193
Query 1241 AAGCGGATGCGGGTGGCAGCATATAGGGGCTTACATAAACTTTGGAGCTTTCTATCTCTG 1300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1194 AAGCGGATGCGGGTGGCAGCATATAGGGGCTTACATAAACTTTGGAGCTTTCTATCTCTG 1253
Query 1301 GGGGATACCCATTGCTGCATCTTTAGCCTTCTGGGTTCATCTGAAAGGTGTTGGCCTTTG 1360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1254 GGGGATACCCATTGCTGCATCTTTAGCCTTCTGGGTTCATCTGAAAGGTGTTGGCCTTTG 1313
Query 1361 GATTGGAATACTAGCTGGTGCCGTTCTGCAAACTCTTCTACTGGCTCTTTTCACAGGCTG 1420
|||||||||| |||| ||||||||||||||||||||||| ||||||||| ||||||||||
Sbjct 1314 GATTGGAATAATAGCCGGTGCCGTTCTGCAAACTCTTCTGCTGGCTCTTGTCACAGGCTG 1373
Query 1421 TACAAACTGGAAAAACCAGGCCCGTGAAGCGAGGAAGCGAATGGCTGTGGCCCATGAATC 1480
| ||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 1374 CATAAACTGGGAAAACCAGGCTCGTGAAGCGAGGAAGCGAATGGCTGTGGCCCATGAATC 1433
Query 1481 AGAACTTACAGAGTCAGAACTTCCCTTATAA 1511
||||||||||||||||||||||||||| |||
Sbjct 1434 AGAACTTACAGAGTCAGAACTTCCCTTTTAA 1464
> AT1G15180.1 | Symbols: | MATE efflux family protein | chr1:5224385-5226702
FORWARD LENGTH=1687
Length=1687
Score = 1748 bits (946), Expect = 0.0
Identities = 1336/1520 (88%), Gaps = 44/1520 (3%)
Strand=Plus/Plus
Query 78 CCGGTAGACAGAGTTGATAAA-GTGACATGGAGAGATCTGCAAGATGGATCT-TTCACCG 135
||||| || |||||||| ||| ||||||||||||||||||| |||||||| | |||||||
Sbjct 110 CCGGTGGAAAGAGTTGA-AAACGTGACATGGAGAGATCTGCGAGATGGAT-TATTCACCG 167
Query 136 CAGAACTCAAGAGGCTTCTCTGCTTTGCGGCTCCTATGGTTGCCGTGGTTATCACTCAGT 195
||||||||||||||||| |||||||||| |||||||||| || || |||||| ||||||
Sbjct 168 CAGAACTCAAGAGGCTTATCTGCTTTGCCGCTCCTATGGCGGCTGTTGTTATCGCTCAGT 227
Query 196 CCATGCTACAGATCATAACAATGGTGATGGTGGGACACCTCGGTAATCTTTCCCTCGCTA 255
|||| | |||||||| ||||||||||||| || |||||||| ||||| ||||||||||
Sbjct 228 TCATGTTGCAGATCATCTCAATGGTGATGGTTGGTCACCTCGGAAATCTCTCCCTCGCTA 287
Query 256 GCGCTTCCT-TCGCCAT-CTCCTTCT-CTAACGTCACTGGCTTCAGCTTCATTATGGGAT 312
| || | || ||||| | |||||||| | |||||||| |||||||||||||| | ||||
Sbjct 288 GTGCCT-CTCTCGCC-TCCTCCTTCTGC-AACGTCACCGGCTTCAGCTTCATCGTAGGAT 344
Query 313 TGTCATCTGCCTTAGATACTCTCAGCGGTCAAGCCTATGGAGCTAAGCTATATCGGAAAC 372
|||||| ||||||||||||| | || |||||||| ||||||||||||||||||||||||
Sbjct 345 TGTCATGTGCCTTAGATACTTTGAGTGGTCAAGCTTATGGAGCTAAGCTATATCGGAAAG 404
Query 373 TAGGTGTTCAAACTTACACGGCTATGTTCTGTCTTACATTAGTTTGTCTCCCTATCTCTC 432
|||| ||||| |||||||| || |||||||||||| ||||||| ||||||||| || |||
Sbjct 405 TAGGAGTTCAGACTTACACAGCAATGTTCTGTCTTGCATTAGTATGTCTCCCTCTCACTC 464
Query 433 TCCTATGGTTCAACATGGGAAA-GCTTCTCGTGA-TCCTTGGCCAAGACCCTTCAATTGC 490
|| ||||||| ||||| ||||| |||||| || | ||||||||||||| ||||| |||||
Sbjct 465 TCATATGGTTAAACAT-GGAAACGCTTCTTGT-ATTCCTTGGCCAAGATCCTTCTATTGC 522
Query 491 ACACGAAGCAGGAAGATTTGCTGCTTGGCTCATCCCTGGACTGTTTGCTTACGCCGTTCT 550
|||||||| || |||| ||||||||| |||||||| ||||||||||||||||| |||||
Sbjct 523 TCACGAAGCCGGCAGATATGCTGCTTGCCTCATCCCAGGACTGTTTGCTTACGCTGTTCT 582
Query 551 ACAGCCGCTCATTCGCTACTTCAAAAACCAGAGCTTGATCACACCTCTCTTCATCACCTC 610
|||||| |||| |||||||||| ||||||||||| |||| ||||||||| ||||||||||
Sbjct 583 ACAGCCTCTCACTCGCTACTTCCAAAACCAGAGCATGATTACACCTCTCCTCATCACCTC 642
Query 611 TTGTGTTGTGTTCTGTCTCCATGTTCCTCTTTGCTGGATTTTGGTTTATAAGTCAGGGCA 670
|||| ||||||||||||||||||||||||| |||||| |||||||||||||||||||||
Sbjct 643 TTGTTTTGTGTTCTGTCTCCATGTTCCTCTCTGCTGGCTTTTGGTTTATAAGTCAGGGCT 702
Query 671 TGGTCATCTTGGAGGAGCCTTGGCTCTCAGTTTATCGTACTGGGTTTCTGCCAGTT-TTC 729
|||| |||||||||||||||| ||||||||||| ||| |||| ||| | ||| || | |
Sbjct 703 TGGTAATCTTGGAGGAGCCTTAGCTCTCAGTTTTTCGAACTGTCTTTATACCA-TTATCC 761
Query 730 TTGGATCTTTCATGTACTACTCCTCTGCCTGTTCTGAGACACGCGCCCCGCTCTCCATGG 789
|||||||||| |||| || ||||||||||||||||||||||||||| |||||||||||||
Sbjct 762 TTGGATCTTTAATGTGCTTCTCCTCTGCCTGTTCTGAGACACGCGCACCGCTCTCCATGG 821
Query 790 AGATATTCGACGGCATTGGAGAGTTCTTCAAATATGCTCTTCCTTCTGCGGCTATGCTTT 849
||||||| |||||||||||||||||||||| ||||||||||||||||||||||||| |||
Sbjct 822 AGATATTTGACGGCATTGGAGAGTTCTTCAGATATGCTCTTCCTTCTGCGGCTATGATTT 881
Query 850 GTCTAGAGTGGTGGTCATATGAACTCGTAATATTACTCTCTGGGCTCTTACCCAACCCAC 909
| || ||||||||||||||||||||| |||||||||||||||| ||||||||||||||||
Sbjct 882 GCCTGGAGTGGTGGTCATATGAACTCATAATATTACTCTCTGGTCTCTTACCCAACCCAC 941
Query 910 AGCTGGAGACTTCTGTGCTCTCTGTCTGTCTCCAAAC-ACTTTCGATAGCT-TATTCAAT 967
||||||||||||||||||||||||||||||||||||| || | ||| || | ||||| ||
Sbjct 942 AGCTGGAGACTTCTGTGCTCTCTGTCTGTCTCCAAACAAC-TGCGACAG-TCTATTCGAT 999
Query 968 ACCA-CTAGCGATCGCGGCTGCAGCAAGCACAAGAATCTCAAATGAATTAGGTGCTGGAA 1026
| || || || ||||| ||||||||||||||||||||||||||||| |||||||||||||
Sbjct 1000 A-CATCTTGCAATCGCAGCTGCAGCAAGCACAAGAATCTCAAATGAGTTAGGTGCTGGAA 1058
Query 1027 ACTCTCGAGCAGC-ACATATTGTGGTCTACGCGGCAATGTCTCTTGCAGTAATGGATGCA 1085
||||||||||||| | |||||||||||||||| |||||||||||||||||| |||| |
Sbjct 1059 ACTCTCGAGCAGCTA-ATATTGTGGTCTACGCAGCAATGTCTCTTGCAGTAGTGGAAATA 1117
Query 1086 TTGATGGTGAGTACATCTCTATTAGTCGGCAGGAATCTTTTCGGCCATGTTTTCAGTAGT 1145
|| || ||||||| ||||||||||||||||||||| ||||||||||||||||||| |||
Sbjct 1118 TTAATATTGAGTACTTCTCTATTAGTCGGCAGGAATGTTTTCGGCCATGTTTTCAGCAGT 1177
Query 1146 GACAAGAAAACCATCGACTATGTTGCAAAGATGGCTCCATTGGTCTCTATTTCTCTCATA 1205
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1178 GACAAGGAAACCATCGACTATGTTGCAAAGATGGCTCCATTGGTCTCTATTTCTCTCATA 1237
Query 1206 CTGGACAGTTTACAAGGGGTTTTCTCAGGTGTTGCAAGCGGATGCGGGTGGCAGCATATA 1265
|||||| |||||||||||||| |||||||| ||||||| |||||||| ||||| ||||||
Sbjct 1238 CTGGACGGTTTACAAGGGGTTCTCTCAGGTATTGCAAGGGGATGCGGATGGCAACATATA 1297
Query 1266 GGGGCTTACATAAACTTTGGAGCTTTCTATCTCTGGGGGATACCCATTGCTGCATCTTTA 1325
|| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 1298 GGAGCTTACATAAACTTAGGAGCTTTCTATCTCTGGGGGATACCCATTGCTGCATCTTTA 1357
Query 1326 GCCTTCTGGGTTCATCTGAAAGGTGTTGGCCTTTGGATTGGAATACTAGCTGGTGCCGTT 1385
||||||||| |||||||||||||||||||||||||||||||||| | ||| |||||||||
Sbjct 1358 GCCTTCTGGATTCATCTGAAAGGTGTTGGCCTTTGGATTGGAATCCAAGCCGGTGCCGTT 1417
Query 1386 CTGCAAACTCTTCTACTGGCTCTTTTCACAGGCTGTACAAACTGGAAAAACCAGGCCCG- 1444
|||||||| ||||| || ||||| |||| ||||| ||||||||| ||| ||||||| |
Sbjct 1418 CTGCAAACGCTTCTGCTTACTCTTGTCACGGGCTGCACAAACTGGGAAAGCCAGGCC-GA 1476
Query 1445 TGAAGCGAGGAAGCGAATGGCTGTGGCCCATGAATCAGAACTTACAGA-G-T-CAGAACT 1501
| ||||||| || ||||||||| ||||| ||| |||| || || | | ||||||
Sbjct 1477 TAAAGCGAGAAATCGAATGGCTTTGGCCTATG-----GAACGTA-AGGCGCTGCAGAACA 1530
Query 1502 TCCCTTATAAGATTACGGGG-GCACAGATGTTCCTCAGGTTTTACCA-TTTTGGTAGCAG 1559
| | | ||||| | | | ||| || ||||||| |||||||||| ||||| ||||||
Sbjct 1531 GC--T-A-AAGATCATAGTGAGCATAG--GTTCCTCCGGTTTTACCAGTTTTG-TAGCAG 1583
Query 1560 CCAAATCGTTGTATGTTACT 1579
| ||| | |||||||||||
Sbjct 1584 ACGAATTGCTGTATGTTACT 1603
> AT1G15170.1 | Symbols: | MATE efflux family protein | chr1:5220641-5222973
FORWARD LENGTH=1712
Length=1712
Score = 1714 bits (928), Expect = 0.0
Identities = 1355/1556 (87%), Gaps = 49/1556 (3%)
Strand=Plus/Plus
Query 78 CCGGTAGACAGAGTTGATAAAGTGACATGGAGAGATCTGCAAGATGGATCTTTCACCGCA 137
|||||||| ||||| || || ||||||||||| ||||||| |||||| || ||||||| |
Sbjct 89 CCGGTAGAGAGAGTCGAGAACGTGACATGGAGCGATCTGCGAGATGGTTCATTCACCGTA 148
Query 138 GAACTCAAGAGGCTTCTCTGCTTTGCGGCTCCTATGGTTGCCGTGGTTATCACTCAGTCC 197
|||||||| |||||| ||| ||| || |||||||||| ||| || |||||| |||||| |
Sbjct 149 GAACTCAAAAGGCTTATCTTCTTCGCCGCTCCTATGGCTGCTGTTGTTATCGCTCAGTTC 208
Query 198 ATGCTACAGATCATAACAATGGTGATGGTGGGACACCTCGGTAATCTTTCCCTCGCTAGC 257
||| |||| ||| | ||||| ||||||| || |||||||| ||||| ||||||||||||
Sbjct 209 ATGTTACAAATCGTTTCAATGATGATGGTTGGTCACCTCGGCAATCTCTCCCTCGCTAGC 268
Query 258 GCTTCCT-TCGCCAT-CTCCTTCT-CTAACGTCACTGGCTTCAGCTTCATTATGGGATTG 314
|| | || ||||| | |||||||| | ||||||||||||||||||||||| || ||||||
Sbjct 269 GCCT-CTCTCGCC-TCCTCCTTCTGC-AACGTCACTGGCTTCAGCTTCATCATAGGATTG 325
Query 315 TCATCTGCCTTAGATACTCTCAGCGGTCAAGCCTATGGAGCTAAGCTATATCGGAAACTA 374
|||| ||||||||||||| | || |||||||| ||||||||||||||||| |||||||||
Sbjct 326 TCATGTGCCTTAGATACTTTGAGTGGTCAAGCTTATGGAGCTAAGCTATACCGGAAACTA 385
Query 375 GGTGTTCAAACTTACACGGCTATGTTCTGTCTTACATTAGTTTGTCTCCCTATCTCTCTC 434
|| ||||| |||||||| ||||||||||||||| ||||||| ||||||||| | ||||||
Sbjct 386 GGAGTTCAGACTTACACTGCTATGTTCTGTCTTGCATTAGTGTGTCTCCCTCTTTCTCTC 445
Query 435 CTATGGTTCAACATGGGAAAGCTTCTCGTGATCCTTGGCCAAGACCCTTCAATTGCACAC 494
| ||||||||||||| ||||||||| |||||||||||||||||||||| ||||| |||
Sbjct 446 ATTTGGTTCAACATGGAAAAGCTTCTTTTGATCCTTGGCCAAGACCCTTCTATTGCTCAC 505
Query 495 GAAGCAGGAAGATTTGCTGCTTGGCTCATCCCTGGACTGTTTGCTTACGCCGTTCTACAG 554
||||| |||| || ||| | ||||| ||||| ||||||||||||||||| |||||||||
Sbjct 506 GAAGCCGGAAAATATGCCACCTGGCTTATCCCAGGACTGTTTGCTTACGCTGTTCTACAG 565
Query 555 CCGCTCATTCGCTAC-TTCAAAAACCAGAGCTTGATCACACCTCTCTTCATCACCTCTTG 613
||||||| ||||||| ||| |||||||||| ||||||||||||||| |||||||||| |
Sbjct 566 CCGCTCACTCGCTACTTTC-AAAACCAGAGTTTGATCACACCTCTCCTCATCACCTCCTA 624
Query 614 TGTTGTGTTCTGTCTCCATGTTCCTCTTTGCTGGATTTTGGTTTATAAGTCAGGGCATGG 673
||||||||||||| |||| |||||||| |||||| |||||||||| || ||||||| |||
Sbjct 625 TGTTGTGTTCTGTATCCACGTTCCTCTCTGCTGGTTTTTGGTTTACAACTCAGGGCTTGG 684
Query 674 TCATCTTGGAGGAGCCTTGGCTCTCAGTTTATCGTACTGGGTTTCTGCCAGTTTT-CTTG 732
| ||||||||||||| |||||| ||||||| || ||||| | | ||||| |||| ||||
Sbjct 685 TAATCTTGGAGGAGCTTTGGCTATCAGTTTGTCAAACTGGCTCTATGCCA-TTTTCCTTG 743
Query 733 GATCTTTCATGTACTACTCCTCTGCCTGTTCTGAGACACGCGCCCCGCTCTCCATGGAGA 792
|||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||
Sbjct 744 GATCTTTCATGTACTACTCCTCTGCCTGTTCTGAGACACGTGCGCCGCTCTCCATGGAGA 803
Query 793 TATTCGACGGCATTGGAGAGTTCTTCAAATATGCTCTTCCTTCTGCGGCTATGCTTTGTC 852
||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||| |
Sbjct 804 TATTCGATGGCATTGGAGAGTTCTTCAAATATGCTCTTCCTTCTGCGGCTATGATTTGCC 863
Query 853 TAGAGTGGTGGTCATATGAACTCGTAATATTACTCTCTGGGCTCTTACCCAACCCACAGC 912
||||||||||||| |||||||| |||||||||||||||| ||||||||||||||||| |
Sbjct 864 TAGAGTGGTGGTCTTATGAACTTATAATATTACTCTCTGGTCTCTTACCCAACCCACAAC 923
Query 913 TGGAGACTTCTGTGCTCTCTGTCTGTCTCCAAACACTTTCGATAGCT-TATTCAATACCA 971
|||||||||||||||||||||||||||| || ||| |||| | | | ||||| ||||||
Sbjct 924 TGGAGACTTCTGTGCTCTCTGTCTGTCTTCAGACAATTTCAACA-ATGTATTCGATACCA 982
Query 972 CTAGCGATCGCGGCTGCAGCAAGCACAAGAATCTCAAATGAATTAGGTGCTGGAAACTCT 1031
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 983 CTAGCAATCGCGGCTGCAGCAAGCACAAGAATCTCAAATGAATTAGGTGCTGGAAACTCT 1042
Query 1032 CGAGCAGCACATATTGTGGTCTACGCGGCAATGTCTCTTGCAGTAATGGATGCATTGATG 1091
|||||||||||||| |||||||| |||||||||||||||||||| || |||||||||||
Sbjct 1043 CGAGCAGCACATATCGTGGTCTATGCGGCAATGTCTCTTGCAGTTATTGATGCATTGATA 1102
Query 1092 GTGAGTACATCTCTATTAGTCGGCAGGAATCTTTTCGGCCATGTTTTCAGTAGTGACAAG 1151
|| |||| |||||| || ||||||||||||||||||| || ||||||| |||||||||
Sbjct 1103 GTTAGTATGTCTCTACTAATCGGCAGGAATCTTTTCGGGCACATTTTCAGCAGTGACAAG 1162
Query 1152 AAAACCATCGACTATGTTGCAAAGATGGCTCCATTGGTCTCTATTTCTCTCATACTGGAC 1211
|||| ||||||||||||||||||||||||||||||||||||||||||||||| || |||
Sbjct 1163 GAAACTATCGACTATGTTGCAAAGATGGCTCCATTGGTCTCTATTTCTCTCATGCTTGAC 1222
Query 1212 AG-TTTACAAGGGGTTTTCTCAGGTGTTGCAAGCGGATGCGGGTGGCAGCATATAGGGGC 1270
| |||||||||||| |||||||| ||||||| |||||||| ||||| |||||||| ||
Sbjct 1223 -GCTTTACAAGGGGTCCTCTCAGGTATTGCAAGGGGATGCGGATGGCAACATATAGGAGC 1281
Query 1271 TTACATAAACTTTGGAGCTTTCTATCTCTGGGGGATACCCATTGCTGCATCTTTAGCCTT 1330
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1282 TTACATAAACTTAGGAGCTTTCTATCTCTGGGGGATACCCATTGCTGCATCTTTAGCCTT 1341
Query 1331 CTGGGTTCATCTGAAAGGTGTTGGCCTTTGGATTGGAATACTAGCTGGTGCCGTTCTGCA 1390
|||| |||||||||||||||||||||||||||||||||| | ||| ||||||||||||||
Sbjct 1342 CTGGATTCATCTGAAAGGTGTTGGCCTTTGGATTGGAATCCAAGCCGGTGCCGTTCTGCA 1401
Query 1391 AACTCTTCTACTGGCTCTTTTCACAGGCTGTACAAACTGGAAAAACCAGGCCCG-TGAAG 1449
||| ||||| || |||||| |||| ||||||||||||||| ||| ||||||| | | |||
Sbjct 1402 AACGCTTCTGCTTGCTCTTGTCACGGGCTGTACAAACTGGGAAAGCCAGGCC-GATAAAG 1460
Query 1450 CGAGGAAGCGAATGGCTGTGGCCCATG-AA--T----C-----AGAAC-----TTACAGA 1492
||||||| ||||||||| ||||| ||| || | | ||||| |||||||
Sbjct 1461 CGAGGAATCGAATGGCTTTGGCCTATGGAACATAAGGCGCTGCAGAACAGCACTTACAGA 1520
Query 1493 GTCAGAACTTCC-CTTAT-AAGAT-TACGGGGGCACAGATGTTCCT-CAGGTTTTACCAT 1548
||||| || || | | | ||||| || ||| | | |||| |||| | |||||||||||
Sbjct 1521 ATCAGATCT-CCGCGTCTGAAGATATA-GGGA-C-CTGATGATCCTTC-GGTTTTACCAT 1575
Query 1549 TTTGGTAGCAGCCAAAT--C-GT--TGTATGTTACTGCTTG-ACTAGTGGTAGCCG 1598
|||| ||| || ||||| | || ||||||||||| ||| ||||||||||||||
Sbjct 1576 TTTGTTAGTAGTCAAATTGCTGTACTGTATGTTACTT-TTGGACTAGTGGTAGCCG 1630
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 79618064370
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5