BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg471708
Length=1672
Score E
Sequences producing significant alignments: (Bits) Value
AT1G15170.1 | Symbols: | MATE efflux family protein | chr1:522... 2519 0.0
AT1G15180.1 | Symbols: | MATE efflux family protein | chr1:522... 2084 0.0
AT1G15150.1 | Symbols: | MATE efflux family protein | chr1:521... 1779 0.0
AT1G15160.1 | Symbols: | MATE efflux family protein | chr1:521... 1748 0.0
> AT1G15170.1 | Symbols: | MATE efflux family protein | chr1:5220641-5222973
FORWARD LENGTH=1712
Length=1712
Score = 2519 bits (1364), Expect = 0.0
Identities = 1589/1694 (94%), Gaps = 30/1694 (2%)
Strand=Plus/Plus
Query 1 tctctctctatctctctGCATTTAGCCATGGGAGACGCAGAGAGCACCACCACTAAGGAT 60
|||||||||||| ||||||||||||||||||||||||||||||| ||||||||||
Sbjct 23 TCTCTCTCTATCACTCTGCATTTAGCCATGGGAGACGCAGAGAG------CACTAAGGAT 76
Query 61 AGCTTGCTGCTGCCGGTAGAGAGGGTCGAGAACGTGACATGGAGAGATCTGCGAGATGGT 120
|||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||
Sbjct 77 CGCTTGCTGCTGCCGGTAGAGAGAGTCGAGAACGTGACATGGAGCGATCTGCGAGATGGT 136
Query 121 TCATTCACCGTAGAACTCAAGAGGCTTATCTGCTTCGCCGCTCCTATGGCGGCTGTGGTC 180
|||||||||||||||||||| |||||||||| |||||||||||||||||| ||||| ||
Sbjct 137 TCATTCACCGTAGAACTCAAAAGGCTTATCTTCTTCGCCGCTCCTATGGCTGCTGTTGTT 196
Query 181 ATCGCTCAGTTCATGTTACAGATCGTTTCAATGATGATGGTTGGTCACCTCGGCAATCTC 240
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 197 ATCGCTCAGTTCATGTTACAAATCGTTTCAATGATGATGGTTGGTCACCTCGGCAATCTC 256
Query 241 TCCCTCGCTAGTGCCTCTCTCGCCTCCTCTTTCTGCAACGTCACTGGCTTCAGCTTCATT 300
||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 257 TCCCTCGCTAGCGCCTCTCTCGCCTCCTCCTTCTGCAACGTCACTGGCTTCAGCTTCATC 316
Query 301 ATAGGACTGTCATGTGCCTTAGATACTTTGAGCGGTCAAGCTTATGGAGCTAAGCTCTAT 360
|||||| ||||||||||||||||||||||||| ||||||||||||||||||||||| ||
Sbjct 317 ATAGGATTGTCATGTGCCTTAGATACTTTGAGTGGTCAAGCTTATGGAGCTAAGCTATAC 376
Query 361 CGGAAACTAGGAGTTCAGACTTACACAGCAATGTTCTGTCTTGCATTAGTGTGTCTCCCT 420
|||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||
Sbjct 377 CGGAAACTAGGAGTTCAGACTTACACTGCTATGTTCTGTCTTGCATTAGTGTGTCTCCCT 436
Query 421 CTTTCTCTCATTTGGTTCAACATGGAAAAGCTTCTTTTGATCCTTGGCCAAGACCCTTCT 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 437 CTTTCTCTCATTTGGTTCAACATGGAAAAGCTTCTTTTGATCCTTGGCCAAGACCCTTCT 496
Query 481 ATTGCACACGAAGCCGGAAGATATGCTACCTGGCTTATCCCAGGACTGTTTGCTTACGCT 540
||||| ||||||||||||| |||||| |||||||||||||||||||||||||||||||||
Sbjct 497 ATTGCTCACGAAGCCGGAAAATATGCCACCTGGCTTATCCCAGGACTGTTTGCTTACGCT 556
Query 541 GTTCTACAGCCTCTCACTCGCTACTTTCAAAACCAGAGCTTGATCACACCTCTACTCATC 600
||||||||||| |||||||||||||||||||||||||| |||||||||||||| ||||||
Sbjct 557 GTTCTACAGCCGCTCACTCGCTACTTTCAAAACCAGAGTTTGATCACACCTCTCCTCATC 616
Query 601 ACCTCTTGTGTTGTGTTCTGTATCCACGTTCCTGTCTGCTGGCTTTTAGTTTACAATTCA 660
||||| | ||||||||||||||||||||||||| |||||||| |||| |||||||| |||
Sbjct 617 ACCTCCTATGTTGTGTTCTGTATCCACGTTCCTCTCTGCTGGTTTTTGGTTTACAACTCA 676
Query 661 GGGCTTGGTAATCTTGGAGGAGCCTTGGCTATCAGTTTATCAAACTGGCTCTATGCCATT 720
||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||
Sbjct 677 GGGCTTGGTAATCTTGGAGGAGCTTTGGCTATCAGTTTGTCAAACTGGCTCTATGCCATT 736
Query 721 TTCCTTGGATCTTTCATGTACTACTCCTCTGCCTGTTCTGAGACACGCGCCCCGCTCTCC 780
||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||
Sbjct 737 TTCCTTGGATCTTTCATGTACTACTCCTCTGCCTGTTCTGAGACACGTGCGCCGCTCTCC 796
Query 781 ATGGAGATATTCGACGGCATTGGAGAGTTCTTCAAATATGCTCTTCCTTCTGCGGCTATG 840
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 797 ATGGAGATATTCGATGGCATTGGAGAGTTCTTCAAATATGCTCTTCCTTCTGCGGCTATG 856
Query 841 ATTTGCCTAGAGTGGTGGTCATACGAACTCATAATATTACTCTCTGGTCTCTTACCCAAC 900
|||||||||||||||||||| || ||||| ||||||||||||||||||||||||||||||
Sbjct 857 ATTTGCCTAGAGTGGTGGTCTTATGAACTTATAATATTACTCTCTGGTCTCTTACCCAAC 916
Query 901 CCACAACTGGAGACTTCTGTGCTCTCTGTCTGTCTCCAAACAATTTCGACAATGTATTCG 960
||||||||||||||||||||||||||||||||||| || |||||||| ||||||||||||
Sbjct 917 CCACAACTGGAGACTTCTGTGCTCTCTGTCTGTCTTCAGACAATTTCAACAATGTATTCG 976
Query 961 ATACCACTAGCGATCGCAGCTGCAGCAAGCACAAGAATCTCAAATGAGTTAGGTGCTGGA 1020
||||||||||| ||||| ||||||||||||||||||||||||||||| ||||||||||||
Sbjct 977 ATACCACTAGCAATCGCGGCTGCAGCAAGCACAAGAATCTCAAATGAATTAGGTGCTGGA 1036
Query 1021 AACTCTCGAGCAGCACATATCGTGGTCTATGCGGCAATGTCTCTTGCAGTTATTGATGCA 1080
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 AACTCTCGAGCAGCACATATCGTGGTCTATGCGGCAATGTCTCTTGCAGTTATTGATGCA 1096
Query 1081 TTGATAGTGAGTATGTCTCTATTAGTCGGCAGGAATCTTTTCGGGCACATTTTCAGCAGT 1140
|||||||| |||||||||||| || |||||||||||||||||||||||||||||||||||
Sbjct 1097 TTGATAGTTAGTATGTCTCTACTAATCGGCAGGAATCTTTTCGGGCACATTTTCAGCAGT 1156
Query 1141 GACAAGGAAACTATCGACTATGTTGCAAAGATGGCTCCATTGGTCTCTATTTCTCTCATG 1200
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1157 GACAAGGAAACTATCGACTATGTTGCAAAGATGGCTCCATTGGTCTCTATTTCTCTCATG 1216
Query 1201 CTAGATGCTTTACAAGGGGTTCTCTCAGGTATTGCAAGGGGATGCGGATGGCAACATATA 1260
|| || |||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 1217 CTTGACGCTTTACAAGGGGTCCTCTCAGGTATTGCAAGGGGATGCGGATGGCAACATATA 1276
Query 1261 GGAGCTTACATAAACTTAGGAGCTTTCTATCTCTGGGGGATACCCATTGCTGCATCTTTA 1320
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1277 GGAGCTTACATAAACTTAGGAGCTTTCTATCTCTGGGGGATACCCATTGCTGCATCTTTA 1336
Query 1321 GCCTTTTGGATTCATCTGAAAGGTGTTGGCCTTTGGATCGGAATCCAAGCCGGTGCCGTT 1380
||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 1337 GCCTTCTGGATTCATCTGAAAGGTGTTGGCCTTTGGATTGGAATCCAAGCCGGTGCCGTT 1396
Query 1381 CTGCAAACGCTTCTGCTTGCTCTTGTCACGGGCTGCACAAACTGGGAAAACCAGGCCAAT 1440
||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||| ||
Sbjct 1397 CTGCAAACGCTTCTGCTTGCTCTTGTCACGGGCTGTACAAACTGGGAAAGCCAGGCCGAT 1456
Query 1441 GAAGCGAGGAAGCGAATGGATTTGGCCTATGGAACGTAAAGCGTTGCAGAACAGCACTTA 1500
|||||||||| ||||||| ||||||||||||||| ||| ||| ||||||||||||||||
Sbjct 1457 AAAGCGAGGAATCGAATGGCTTTGGCCTATGGAACATAAGGCGCTGCAGAACAGCACTTA 1516
Query 1501 C-----C-GA-----G--TC--A-GA-A--GGGACCAT-ATGTTCCTCCGGTTTAACCCT 1540
| | || | || | || | |||||| | ||| |||| |||||| ||| |
Sbjct 1517 CAGAATCAGATCTCCGCGTCTGAAGATATAGGGACC-TGATGATCCTTCGGTTTTACCAT 1575
Query 1541 GTTGTTAGCAGTCAAATTGCTGTACTGTATGTTACTTTTGGACTAGTGGTAGCCGCTAA- 1599
||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 1576 TTTGTTAGTAGTCAAATTGCTGTACTGTATGTTACTTTTGGACTAGTGGTAGCCGC-AAG 1634
Query 1600 TAATAGGGCATGGTTATCCAAAAAG-AGCCTTTTCTGTGTTCTCAATAACAAAGAATAAT 1658
||||| |||||||| ||||||||| |||||||||| ||||||||| |||||||||||||
Sbjct 1635 TAATATTGCATGGTTTTCCAAAAAGGAGCCTTTTCTCTGTTCTCAACAACAAAGAATAAT 1694
Query 1659 GATTAGATTCACTG 1672
|| ||||||||||
Sbjct 1695 GAACAGATTCACTG 1708
> AT1G15180.1 | Symbols: | MATE efflux family protein | chr1:5224385-5226702
FORWARD LENGTH=1687
Length=1687
Score = 2084 bits (1128), Expect = 0.0
Identities = 1415/1552 (91%), Gaps = 25/1552 (2%)
Strand=Plus/Plus
Query 25 GCCATGGGAGACGCAGAGAGCACCACCACTAAGGA-TAGCTTGCTGCTGCCGGTAGAGAG 83
|||||||||||||||||||||||| ||| || | |||||||||||| ||||| || ||
Sbjct 65 GCCATGGGAGACGCAGAGAGCACCTCCA--AA--ACTAGCTTGCTGCTCCCGGTGGAAAG 120
Query 84 GGTCGAGAACGTGACATGGAGAGATCTGCGAGATGG-TTCATTCACCGTAGAACTCAAGA 142
|| || ||||||||||||||||||||||||||||| || |||||||| |||||||||||
Sbjct 121 AGTTGAAAACGTGACATGGAGAGATCTGCGAGATGGATT-ATTCACCGCAGAACTCAAGA 179
Query 143 GGCTTATCTGCTTCGCCGCTCCTATGGCGGCTGTGGTCATCGCTCAGTTCATGTTACAGA 202
||||||||||||| |||||||||||||||||||| || ||||||||||||||||| ||||
Sbjct 180 GGCTTATCTGCTTTGCCGCTCCTATGGCGGCTGTTGTTATCGCTCAGTTCATGTTGCAGA 239
Query 203 TCGTTTCAATGATGATGGTTGGTCACCTCGGCAATCTCTCCCTCGCTAGTGCCTCTCTCG 262
|| | |||||| ||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 240 TCATCTCAATGGTGATGGTTGGTCACCTCGGAAATCTCTCCCTCGCTAGTGCCTCTCTCG 299
Query 263 CCTCCTCTTTCTGCAACGTCACTGGCTTCAGCTTCATTATAGGACTGTCATGTGCCTTAG 322
||||||| |||||||||||||| |||||||||||||| ||||| |||||||||||||||
Sbjct 300 CCTCCTCCTTCTGCAACGTCACCGGCTTCAGCTTCATCGTAGGATTGTCATGTGCCTTAG 359
Query 323 ATACTTTGAGCGGTCAAGCTTATGGAGCTAAGCTCTATCGGAAACTAGGAGTTCAGACTT 382
|||||||||| ||||||||||||||||||||||| ||||||||| |||||||||||||||
Sbjct 360 ATACTTTGAGTGGTCAAGCTTATGGAGCTAAGCTATATCGGAAAGTAGGAGTTCAGACTT 419
Query 383 ACACAGCAATGTTCTGTCTTGCATTAGTGTGTCTCCCTCTTTCTCTCATTTGGTTCAACA 442
|||||||||||||||||||||||||||| ||||||||||| ||||||| ||||| ||||
Sbjct 420 ACACAGCAATGTTCTGTCTTGCATTAGTATGTCTCCCTCTCACTCTCATATGGTTAAACA 479
Query 443 TGGAAAAGCTTCTTTTGA-TCCTTGGCCAAGACCCTTCTATTGCACACGAAGCCGGAAGA 501
|||||| ||||||| | | ||||||||||||| ||||||||||| ||||||||||| |||
Sbjct 480 TGGAAACGCTTCTTGT-ATTCCTTGGCCAAGATCCTTCTATTGCTCACGAAGCCGGCAGA 538
Query 502 TATGCTACCTGGCTTATCCCAGGACTGTTTGCTTACGCTGTTCTACAGCCTCTCACTCGC 561
|||||| | || || |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 539 TATGCTGCTTGCCTCATCCCAGGACTGTTTGCTTACGCTGTTCTACAGCCTCTCACTCGC 598
Query 562 TACTTTCAAAACCAGAGCTTGATCACACCTCTACTCATCACCTCTTGTGTTGTGTTCTGT 621
||||| |||||||||||| |||| |||||||| ||||||||||||||| |||||||||||
Sbjct 599 TACTTCCAAAACCAGAGCATGATTACACCTCTCCTCATCACCTCTTGTTTTGTGTTCTGT 658
Query 622 ATCCACGTTCCTGTCTGCTGGCTTTTAGTTTACAATTCAGGGCTTGGTAATCTTGGAGGA 681
|||| |||||| ||||||||||||| ||||| || ||||||||||||||||||||||||
Sbjct 659 CTCCATGTTCCTCTCTGCTGGCTTTTGGTTTATAAGTCAGGGCTTGGTAATCTTGGAGGA 718
Query 682 GCCTTGGCTATCAGTTTATCAAACTGGCTCTATGCCATTTTCCTTGGATCTTTCATGTAC 741
||||| ||| ||||||| || ||||| || ||| ||||| ||||||||||||| |||| |
Sbjct 719 GCCTTAGCTCTCAGTTTTTCGAACTGTCTTTATACCATTATCCTTGGATCTTTAATGTGC 778
Query 742 TACTCCTCTGCCTGTTCTGAGACACGCGCCCCGCTCTCCATGGAGATATTCGACGGCATT 801
| ||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||
Sbjct 779 TTCTCCTCTGCCTGTTCTGAGACACGCGCACCGCTCTCCATGGAGATATTTGACGGCATT 838
Query 802 GGAGAGTTCTTCAAATATGCTCTTCCTTCTGCGGCTATGATTTGCCTAGAGTGGTGGTCA 861
||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 839 GGAGAGTTCTTCAGATATGCTCTTCCTTCTGCGGCTATGATTTGCCTGGAGTGGTGGTCA 898
Query 862 TACGAACTCATAATATTACTCTCTGGTCTCTTACCCAACCCACAACTGGAGACTTCTGTG 921
|| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 899 TATGAACTCATAATATTACTCTCTGGTCTCTTACCCAACCCACAGCTGGAGACTTCTGTG 958
Query 922 CTCTCTGTCTGTCTCCAAACAATTTCGACAATGTATTCGATACCA-CTAGCGATCGCAGC 980
|||||||||||||||||||||| | ||||| | ||||||||| || || || ||||||||
Sbjct 959 CTCTCTGTCTGTCTCCAAACAACTGCGACAGTCTATTCGATA-CATCTTGCAATCGCAGC 1017
Query 981 TGCAGCAAGCACAAGAATCTCAAATGAGTTAGGTGCTGGAAACTCTCGAGCAGC-ACATA 1039
|||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||
Sbjct 1018 TGCAGCAAGCACAAGAATCTCAAATGAGTTAGGTGCTGGAAACTCTCGAGCAGCTA-ATA 1076
Query 1040 TCGTGGTCTATGCGGCAATGTCTCTTGCAGTTA-TTGATGCATTGATAGTGAGTA-TGTC 1097
| |||||||| || |||||||||||||||| || | || ||| ||| |||||| | ||
Sbjct 1077 TTGTGGTCTACGCAGCAATGTCTCTTGCAG-TAGTGGAAATATTAATATTGAGTACT-TC 1134
Query 1098 TCTATTAGTCGGCAGGAATCTTTTCGGGCACATTTTCAGCAGTGACAAGGAAACTATCGA 1157
||||||||||||||||||| ||||||| || |||||||||||||||||||||| |||||
Sbjct 1135 TCTATTAGTCGGCAGGAATGTTTTCGGCCATGTTTTCAGCAGTGACAAGGAAACCATCGA 1194
Query 1158 CTATGTTGCAAAGATGGCTCCATTGGTCTCTATTTCTCTCATGCTAGATGCTTTACAAGG 1217
|||||||||||||||||||||||||||||||||||||||||| || || | |||||||||
Sbjct 1195 CTATGTTGCAAAGATGGCTCCATTGGTCTCTATTTCTCTCATACTGGACGGTTTACAAGG 1254
Query 1218 GGTTCTCTCAGGTATTGCAAGGGGATGCGGATGGCAACATATAGGAGCTTACATAAACTT 1277
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1255 GGTTCTCTCAGGTATTGCAAGGGGATGCGGATGGCAACATATAGGAGCTTACATAAACTT 1314
Query 1278 AGGAGCTTTCTATCTCTGGGGGATACCCATTGCTGCATCTTTAGCCTTTTGGATTCATCT 1337
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 1315 AGGAGCTTTCTATCTCTGGGGGATACCCATTGCTGCATCTTTAGCCTTCTGGATTCATCT 1374
Query 1338 GAAAGGTGTTGGCCTTTGGATCGGAATCCAAGCCGGTGCCGTTCTGCAAACGCTTCTGCT 1397
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 1375 GAAAGGTGTTGGCCTTTGGATTGGAATCCAAGCCGGTGCCGTTCTGCAAACGCTTCTGCT 1434
Query 1398 TGCTCTTGTCACGGGCTGCACAAACTGGGAAAACCAGGCCAATGAAGCGAGGAAGCGAAT 1457
| |||||||||||||||||||||||||||||| ||||||| || ||||||| || |||||
Sbjct 1435 TACTCTTGTCACGGGCTGCACAAACTGGGAAAGCCAGGCCGATAAAGCGAGAAATCGAAT 1494
Query 1458 GGATTTGGCCTATGGAACGTAAAGCGTTGCAGAACAGCACTTACCGAGTCAGAAGGGACC 1517
|| ||||||||||||||||||| ||| ||||||||||| | | || ||| | | || |
Sbjct 1495 GGCTTTGGCCTATGGAACGTAAGGCGCTGCAGAACAGC--TAAA-GA-TCATA-GTGAGC 1549
Query 1518 ATATGTTCCTCCGGTTTAACCC-TGTTGTTAGCAGTCAAATTGCTGTACTGT 1568
||| ||||||||||||| ||| | |||| ||||| | |||||||||| |||
Sbjct 1550 ATAGGTTCCTCCGGTTTTACCAGTTTTGT-AGCAGACGAATTGCTGTA-TGT 1599
> AT1G15150.1 | Symbols: | MATE efflux family protein | chr1:5212615-5214858
FORWARD LENGTH=1658
Length=1658
Score = 1779 bits (963), Expect = 0.0
Identities = 1363/1552 (88%), Gaps = 44/1552 (3%)
Strand=Plus/Plus
Query 73 CCGGTAGAGAGGGTCGAGAACGTGACATGGAGAGATCTGCGAGATGGTTCATTCACCGTA 132
|||||||| || | ||||| ||||||||||||||||||| ||| || || ||||||| |
Sbjct 90 CCGGTAGACAGAATTGAGAAAGTGACATGGAGAGATCTGCAAGACGGATCTTTCACCGCA 149
Query 133 GAACTCAAGAGGCTTATCTGCTTCGCCGCTCCTATGGCGGCTGTGGTCATCGCTCAGTTC 192
||||||||||||||||||||||| || ||||||||||| || ||||| ||| |||||||
Sbjct 150 GAACTCAAGAGGCTTATCTGCTTTGCGGCTCCTATGGCTGCCGTGGTTATCATTCAGTTC 209
Query 193 ATGTTACAGATCGTTTCAATGATGATGGTTGGTCACCTCGGCA-ATCTCTCCCTCGCTAG 251
||| ||||||| | |||||| ||||||| ||||||||||| | | ||||||||||||||
Sbjct 210 ATGATACAGATAATCTCAATGGTGATGGTGGGTCACCTCGGTAGA-CTCTCCCTCGCTAG 268
Query 252 TGCCT-CTCTCGC-CTCCTCTTTCTGCAACGTCACTGGCTTCAGCTTCATTATAGGACTG 309
|| | || |||| | ||| ||||| |||||||||||||||||||||||||||||| ||
Sbjct 269 CGCTTCCT-TCGCAGT-CTCCTTCTGTAACGTCACTGGCTTCAGCTTCATTATAGGATTG 326
Query 310 TCATGTGCCTTAGATACTTTGAGCGGTCAAGCTTATGGAGCTAAGCTCTATCGGAAACTA 369
||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||
Sbjct 327 TCATGTGCCTTAGATACTTTGAGTGGTCAAGCTTATGGAGCTAAGCTATATCGGAAACTA 386
Query 370 GGAGTTCAGACTTACACAGCAATGTTCTGTCTTGCATTAGTGTGTCTCCCTCTTTCTCTC 429
|| |||||| |||||||||| |||||||||||| | ||||||||||||||||| ||||||
Sbjct 387 GGTGTTCAGGCTTACACAGCTATGTTCTGTCTTACTTTAGTGTGTCTCCCTCTCTCTCTC 446
Query 430 ATTTGGTTCAACATGGAAAAGCTTCTTTTGATCCTTGGCCAAGACCCTTCTATTGCACAC 489
| ||||||||||||| ||||||| || |||||||||||||||||||| ||||||| |||
Sbjct 447 CTATGGTTCAACATGGGAAAGCTTATTGTGATCCTTGGCCAAGACCCTGCTATTGCTCAC 506
Query 490 GAAGCCGGAAGATATGCTACCTGGCTTATCCCAGGACTGTTTGCTTACGCTGTTCTACAG 549
||||| || |||||||| | ||||| |||||||||||||| |||||||| ||||| |||
Sbjct 507 GAAGCTGGTAGATATGCCGCTTGGCTCATCCCAGGACTGTTCGCTTACGCCGTTCTTCAG 566
Query 550 CCTCTCACTCGCTACTTTC-AAAACCAGAGCTTGATCACACCTCTACTCATCACCTCTTG 608
|| |||| ||||||| ||| ||||||||||||||||||||||||| ||| |||||||||
Sbjct 567 CCGCTCATTCGCTAC-TTCAAAAACCAGAGCTTGATCACACCTCTCCTCGTCACCTCTTC 625
Query 609 TGTTGTGTTCTGTATCCACGTTCCTGTCTGCTGGCTTTTAGTTTACAATTCAGGGCTTGG 668
||||||||| ||||||||||||||| ||||||||||||| ||||| || |||||||||||
Sbjct 626 TGTTGTGTTTTGTATCCACGTTCCTCTCTGCTGGCTTTTGGTTTATAAGTCAGGGCTTGG 685
Query 669 TAATCTTGGAGGAGCCTTGGCTATCAGTTTATCAAACTGGCTCTATGCCATTTTCCTTGG 728
| || ||||||||||||||||| |||| || ||| |||||||||||||||||||||||||
Sbjct 686 TCATATTGGAGGAGCCTTGGCTCTCAGCTTGTCATACTGGCTCTATGCCATTTTCCTTGG 745
Query 729 ATCTTTCATGTACTACTCCTCTGCCTGTTCTGAGACACGCGCCCCGCTCT-CCATGGAGA 787
|||||||||||||||||||||||||||||||||||||||||| ||||| | |||||||||
Sbjct 746 ATCTTTCATGTACTACTCCTCTGCCTGTTCTGAGACACGCGCGCCGCT-TACCATGGAGA 804
Query 788 TATTCGACGGCATTGGAGAGTTCT-TCAAATATGCTCTTCCTTCTGCGGCTATGATTTGC 846
||||||| ||| || ||||||| | ||||||||||||||||||||||||||||| |||||
Sbjct 805 TATTCGAGGGCGTTAGAGAGTT-TATCAAATATGCTCTTCCTTCTGCGGCTATGCTTTGC 863
Query 847 CTAGAGTGGTGGTCATACGAACTCATAATATTACTCTCTGGTCTCTTACCCAACCCACAA 906
|| |||||||||||||| ||||||||||||||||| |||||||| ||||||||||||||
Sbjct 864 CTGGAGTGGTGGTCATATGAACTCATAATATTACTTTCTGGTCTGTTACCCAACCCACAG 923
Query 907 CTGGAGACTTCTGTGCTCTCTGTCTGTCTCCAAACAATTTCGACAA-TGTATTCGATACC 965
||||||||||||||||||||| ||||| || ||||| |||| | || | ||||| |||||
Sbjct 924 CTGGAGACTTCTGTGCTCTCTATCTGTTTCGAAACACTTTCAATAACT-TATTCAATACC 982
Query 966 ACTAGCGATCGCAGCTGCAGCAAGCACAAGAATCTCAAATGAGTTAGGTGCTGGAAACTC 1025
|||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 983 ACTAGCGATCGCGGCTGCAGCAAGCACAAGAATCTCAAATGAGTTAGGAGCTGGAAACTC 1042
Query 1026 TCGAGCAGCACATATCGTGGTCTATGCGGCAATGTCTCTTGCAGTTATTGATGCATTGAT 1085
||||||||||||||| ||||||||||||||||||||||||||||| || |||||||||||
Sbjct 1043 TCGAGCAGCACATATTGTGGTCTATGCGGCAATGTCTCTTGCAGTAATGGATGCATTGAT 1102
Query 1086 AGTGAGTATGTCTCTATTAGTCGGCAGGAATCTTTTCGGGCACATTTTCAGCAGTGACAA 1145
||||||||||||||||||| ||||||| || ||||||| || ||||||||||||||||
Sbjct 1103 GGTGAGTATGTCTCTATTAGCCGGCAGGCATGTTTTCGGCCATGTTTTCAGCAGTGACAA 1162
Query 1146 GGAAACTATCGACTATGTTGCAAAGATGGCTCCATTGGTCTCTATTTCTCTCATGCTAGA 1205
| |||| ||||| |||||||||||||||||||| ||||||||||||||| |||| || ||
Sbjct 1163 GAAAACCATCGAATATGTTGCAAAGATGGCTCCGTTGGTCTCTATTTCTATCATACTGGA 1222
Query 1206 T-GCTTTACAAGGGGTTCTCTCAGGTATTGCAAGGGGATGCGGATGGCAACATATAGGAG 1264
| |||||||||||||||||||||| ||||||| |||||||| ||||| |||||||| |
Sbjct 1223 CAG-TTTACAAGGGGTTCTCTCAGGTGTTGCAAGCGGATGCGGGTGGCAGCATATAGGGG 1281
Query 1265 CTTACATAAACTTAGGAGCTTTCTATCTCTGGGGGATACCCATTGCTGCATCTTTAGCCT 1324
||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 1282 CTTACATAAACTTCGGAGCTTTCTATCTCTGGGGGATACCCATTGCAGCATCTTTAGCCT 1341
Query 1325 TTTGGATTCATCTGAAAGGTGTTGGCCTTTGGATCGGAATCCAAGCCGGTGCCGTTCTGC 1384
| ||| |||||||||||||||||||||||||||| ||||| | ||||||||| |||||||
Sbjct 1342 TCTGGGTTCATCTGAAAGGTGTTGGCCTTTGGATTGGAATACTAGCCGGTGCAGTTCTGC 1401
Query 1385 AAACGCTTCTGCTTGCTCTTGTCACGGGCTGCACAAACTGGGAAAACC-AGGCCAATGAA 1443
| || |||||||| ||||||||||| ||||||||||||||| |||||| ||||| ||||
Sbjct 1402 AGACTCTTCTGCTGGCTCTTGTCACAGGCTGCACAAACTGG-AAAACCCAGGCCCGTGAA 1460
Query 1444 GCGAGGAAGCGAATGGATTTGGCCTATGGAA-C-GTAAAGCGTTGCAGAA-CAGCACTTA 1500
|||||| ||||||||| | ||||| ||| || | | || | || |||| ||| ||||
Sbjct 1461 GCGAGGGAGCGAATGGCTGTGGCCCATG-AATCAG-AA--C-TTACAGAGTCAGAACTTC 1515
Query 1501 CCGAGTC-A-GA--A--GGGAC-CATATGTTCCTCCGGTTTAACCCTGTT-GTTAGCAGT 1552
|| | || | || | ||||| || |||||||||| ||| ||| | || || |||||
Sbjct 1516 CC-A-TCTAAGATTACAGGGACACAGATGTTCCTCCTATTTTACCATTTTTGT-AGCAGC 1572
Query 1553 CAAATTGCTGTACTGTATGTTACTTTTGGACTAGTGGTAGCCGCT-AATAAT 1603
||||| | | || | |||||||| |||||||||||| |||| | ||||||
Sbjct 1573 CAAATCG-T-TA-T--ATGTTACTGCTGGACTAGTGGTTGCCG-TGAATAAT 1618
> AT1G15160.1 | Symbols: | MATE efflux family protein | chr1:5215475-5217545
FORWARD LENGTH=1464
Length=1464
Score = 1748 bits (946), Expect = 0.0
Identities = 1262/1412 (89%), Gaps = 32/1412 (2%)
Strand=Plus/Plus
Query 76 GTAGAGAGGGTCGAGAACGTGACATGGAGAGATCTGCGAGATGGTTCATTCACCGTAGAA 135
||||| || || ||||| || |||||||||||||||| ||| || || ||||||| ||||
Sbjct 34 GTAGACAGAGTTGAGAAAGTAACATGGAGAGATCTGCAAGACGGATCTTTCACCGCAGAA 93
Query 136 CTCAAGAGGCTTATCTGCTTCGCCGCTCCTATGGCGGCTGTGGTCATCGCTCAGTTCATG 195
||||||| |||||| ||||| || ||||||||||| || ||||| ||| |||||| ||||
Sbjct 94 CTCAAGAAGCTTATATGCTTTGCGGCTCCTATGGCTGCCGTGGTTATCACTCAGTCCATG 153
Query 196 TTACAGATCGTTTCAATGATGATGGTTGGTCACCTCGGCA-ATCTCTCCCTCGCTAGTGC 254
||||||||| | ||||| |||| || ||||||||||||| | ||||| |||||||| ||
Sbjct 154 TTACAGATCATAACAATGGTGATTGTGGGTCACCTCGGCAGA-CTCTCTCTCGCTAGCGC 212
Query 255 CT-CTCTCGCC-TCCTCTTTCTGCAACGTCACTGGCTTCAGCTTCATTATAGGACTGTCA 312
| || ||||| | ||| ||||| |||||||||||||||||||||||||| ||| |||||
Sbjct 213 TTCCT-TCGCCAT-CTCCTTCTGTAACGTCACTGGCTTCAGCTTCATTATGGGATTGTCA 270
Query 313 TGTGCCTTAGATACTTTGAGCGGTCAAGCTTATGGAGCTAAGCTCTATCGGAAACTAGGA 372
||||||||||||||| | ||||||||||| |||||||||||||| ||||||||||||||
Sbjct 271 TGTGCCTTAGATACTCTCAGCGGTCAAGCCTATGGAGCTAAGCTATATCGGAAACTAGGT 330
Query 373 GTTCAGACTTACACAGCAATGTTCTGTCTTGCATTAGTGTGTCTCCCTCTTTCTCTCATT 432
|||||| |||||||||| |||||||||||| ||||||||||||||||||| |||||| |
Sbjct 331 GTTCAGGCTTACACAGCTATGTTCTGTCTTACATTAGTGTGTCTCCCTCTCTCTCTCCTA 390
Query 433 TGGTTCAACATGGAAAAGCTTCTTTTGATCCTTGGCCAAGACCCTTCTATTGCACACGAA 492
||||||||||||| ||||||||| |||||||||||||||||||||| ||||||||||||
Sbjct 391 TGGTTCAACATGGGAAAGCTTCTCGTGATCCTTGGCCAAGACCCTTCAATTGCACACGAA 450
Query 493 GCCGGAAGATATGCTACCTGGCTTATCCCAGGACTGTTTGCTTACGCTGTTCTACAGCCT 552
|||||||||| |||| | ||||| |||||||||||||||||||||||||||||||||||
Sbjct 451 GCCGGAAGATTTGCTGCTTGGCTCATCCCAGGACTGTTTGCTTACGCTGTTCTACAGCCG 510
Query 553 CTCACTCGCTACTTTC-AAAACCAGAGCTTGATCACACCTCTACTCATCACCTCTTGTGT 611
|| ||||||||| ||| |||||||||||||||| |||||||| || ||||||||||||||
Sbjct 511 CTTACTCGCTAC-TTCAAAAACCAGAGCTTGATAACACCTCTCCTTATCACCTCTTGTGT 569
Query 612 TGTGTTCTGTATCCACGTTCCTGTCTGCTGGCTTTTAGTTTACAATTCAGGGCTTGGTAA 671
|||||||||| |||| |||||| | || |||||||| ||||| || |||||||||| | |
Sbjct 570 TGTGTTCTGTCTCCATGTTCCTCTTTGTTGGCTTTTGGTTTATAAGTCAGGGCTTGATCA 629
Query 672 TCTTGGAGGAGCCTTGGCTATCAGTTTATCAAACTGGCTCTATGCCAT-TTTCCTTGGAT 730
| ||||||||||||||||| ||||||| ||| |||||||||||||||| ||| |||||||
Sbjct 630 TATTGGAGGAGCCTTGGCTCTCAGTTTGTCATACTGGCTCTATGCCATCTTT-CTTGGAT 688
Query 731 CTTTCATGTACTACTCCTCTGCCTGTTCTGAGACACGCGCCCCGCTCT-CCATGGAGATA 789
|||||||||||| ||||||||| |||||||||||||| || ||||| | |||||||||||
Sbjct 689 CTTTCATGTACTTCTCCTCTGCTTGTTCTGAGACACGTGCACCGCT-TACCATGGAGATA 747
Query 790 TTCGACGGCATTGGAGAGTTCT-TCAAATATGCTCTTCCTTCTGCGGCTATGATTTGCCT 848
||||| ||| || ||||||| | ||||||||||||||||||||||||||||| |||||||
Sbjct 748 TTCGAGGGCGTTAGAGAGTT-TATCAAATATGCTCTTCCTTCTGCGGCTATGCTTTGCCT 806
Query 849 AGAGTGGTGGTCATACGAACTCATAATATTACTCTCTGGTCTCTTACCCAACCCACAACT 908
|||||||||||| || ||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 807 AGAGTGGTGGTCTTATGAACTCATAATATTACTATCTGGTCTCTTACCCAACCCACAACT 866
Query 909 GGAGACTTCTGTGCTCTCTGTCTGTCTCCAAACAATTTCGACAA-TGTATTCGATACCAC 967
|||||||||||||||||||||||||||||||||| |||||| | | |||||||||||||
Sbjct 867 GGAGACTTCTGTGCTCTCTGTCTGTCTCCAAACACTTTCGATGACT-TATTCGATACCAC 925
Query 968 TAGCGATCGCAGCTGCAGCAAGCACAAGAATCTCAAATGAGTTAGGTGCTGGAAACTCTC 1027
||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 926 TAGCGATTGCAGCTGCAGCAAGCACAAGAATCTCAAATGAATTAGGTGCTGGAAACTCTC 985
Query 1028 GAGCAGCACATATCGTGGTCTATGCGGCAATGTCTCTTGCAGTTATTG-ATGCATTGATA 1086
||||||||||||| |||||||| |||||||||||||||||||| | || ||||||||||
Sbjct 986 GAGCAGCACATATTGTGGTCTACGCGGCAATGTCTCTTGCAGT-AGTGGATGCATTGATG 1044
Query 1087 GTGAGTATGTCTCTATTAG-TCGGCAGGAATCTTTTCGGGCACA--TTTTCAGCAGTGAC 1143
||| ||| ||||||||||| | || | |||||| || |||| || ||||||||||||||
Sbjct 1045 GTGGGTACGTCTCTATTAGCT-GGTAAGAATCTGTT-GGGC-CAAGTTTTCAGCAGTGAC 1101
Query 1144 AAGGAA-ACTATCGACTATGTTGCAAAGATGGCTCCATTGGTCTCTATTTCTCTCATGCT 1202
||| || || ||||||||||||||||||||||||||| ||||||||||||||||||| ||
Sbjct 1102 AAG-AATACCATCGACTATGTTGCAAAGATGGCTCCACTGGTCTCTATTTCTCTCATACT 1160
Query 1203 AGAT-GCTTTACAAGGGGTTCTCTCAGGTATTGCAAGGGGATGCGGATGGCAACATATAG 1261
|| | |||||||||||||||||||||| ||||||| |||||||| ||||| |||||||
Sbjct 1161 GGACAG-TTTACAAGGGGTTCTCTCAGGTGTTGCAAGCGGATGCGGGTGGCAGCATATAG 1219
Query 1262 GAGCTTACATAAACTTAGGAGCTTTCTATCTCTGGGGGATACCCATTGCTGCATCTTTAG 1321
| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 1220 GGGCTTACATAAACTTTGGAGCTTTCTATCTCTGGGGGATACCCATTGCTGCATCTTTAG 1279
Query 1322 CCTTTTGGATTCATCTGAAAGGTGTTGGCCTTTGGATCGGAATCCA-AGCCGGTGCCGTT 1380
|||| ||| |||||||||||||||||||||||||||| ||||| | |||||||||||||
Sbjct 1280 CCTTCTGGGTTCATCTGAAAGGTGTTGGCCTTTGGATTGGAATA-ATAGCCGGTGCCGTT 1338
Query 1381 CTGCAAACGCTTCTGCTTGCTCTTGTCACGGGCTGCACAAACTGGGAAAACCAGGC-CAA 1439
|||||||| |||||||| ||||||||||| ||||||| |||||||||||||||||| |
Sbjct 1339 CTGCAAACTCTTCTGCTGGCTCTTGTCACAGGCTGCATAAACTGGGAAAACCAGGCTCG- 1397
Query 1440 TGAAGCGAGGAAGCGAATGGATTTGGCCTATG 1471
|||||||||||||||||||| | ||||| |||
Sbjct 1398 TGAAGCGAGGAAGCGAATGGCTGTGGCCCATG 1429
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 82630097070
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5