BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg471709
Length=1655
Score E
Sequences producing significant alignments: (Bits) Value
AT1G15180.1 | Symbols: | MATE efflux family protein | chr1:522... 2497 0.0
AT1G15170.1 | Symbols: | MATE efflux family protein | chr1:522... 1932 0.0
AT1G15150.1 | Symbols: | MATE efflux family protein | chr1:521... 1709 0.0
AT1G15160.1 | Symbols: | MATE efflux family protein | chr1:521... 1709 0.0
> AT1G15180.1 | Symbols: | MATE efflux family protein | chr1:5224385-5226702
FORWARD LENGTH=1687
Length=1687
Score = 2497 bits (1352), Expect = 0.0
Identities = 1560/1660 (94%), Gaps = 15/1660 (1%)
Strand=Plus/Plus
Query 1 AAACACTCTCTATATCTCCCTCCGGCTAGGCTGTGTAGTAGCTGTTCGCCATGGGAGACG 60
||||| ||||| ||||||||||||||||||| | |||||||||||||||||||||||
Sbjct 23 AAACATTCTCTCTATCTCCCTCCGGCTAGGC----T-GTAGCTGTTCGCCATGGGAGACG 77
Query 61 CAGAGAGCACCTCCAAAACTAGCTTGCTGCTGCCGGTGGAAAGGGTTGAGAACGTGACAT 120
||||||||||||||||||||||||||||||| ||||||||||| ||||| ||||||||||
Sbjct 78 CAGAGAGCACCTCCAAAACTAGCTTGCTGCTCCCGGTGGAAAGAGTTGAAAACGTGACAT 137
Query 121 GGAGAGATCTGCCAGACGGATCATTCACCGCTGAACTCAAGAGGCTCCTCTGCTTCGCCG 180
|||||||||||| ||| |||| ||||||||| |||||||||||||| ||||||| ||||
Sbjct 138 GGAGAGATCTGCGAGATGGATTATTCACCGCAGAACTCAAGAGGCTTATCTGCTTTGCCG 197
Query 181 CTCCTATGGCGGCTGTTGTTACCGCTCAGTTCATGTTGCAGATCATCTCAATGGTTATGG 240
||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||
Sbjct 198 CTCCTATGGCGGCTGTTGTTATCGCTCAGTTCATGTTGCAGATCATCTCAATGGTGATGG 257
Query 241 TTGGTCACCTTGGTAATCTCTCCCTCGCTAGTGCCTCTCTCGCTTCCTCTTTCTGCAACG 300
|||||||||| || ||||||||||||||||||||||||||||| ||||| ||||||||||
Sbjct 258 TTGGTCACCTCGGAAATCTCTCCCTCGCTAGTGCCTCTCTCGCCTCCTCCTTCTGCAACG 317
Query 301 TCACTGGCTTCAGCTTCATTGTAGGATTGTCATGTGCCTTAGATACTTTGA-TCGGTCAA 359
|||| |||||||||||||| ||||||||||||||||||||||||||||||| | ||||||
Sbjct 318 TCACCGGCTTCAGCTTCATCGTAGGATTGTCATGTGCCTTAGATACTTTGAGT-GGTCAA 376
Query 360 GCTTATGGAGCTAAGCTCTATCGGAAAGTAGGAGTTCAGGCTTACACAGCAATGTTCTGT 419
||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||
Sbjct 377 GCTTATGGAGCTAAGCTATATCGGAAAGTAGGAGTTCAGACTTACACAGCAATGTTCTGT 436
Query 420 CTTGCATTAGTGTGTCTCCCTCTCACTGTCATATGGTTAAACATGGAAACGCTTCTAGTA 479
||||||||||| ||||||||||||||| |||||||||||||||||||||||||||| |||
Sbjct 437 CTTGCATTAGTATGTCTCCCTCTCACTCTCATATGGTTAAACATGGAAACGCTTCTTGTA 496
Query 480 TTCCTTGGCCAAGATCCTTCTATTGCTCACGAAGCCGGCAGATATGCTGCCTGCCTCATC 539
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 497 TTCCTTGGCCAAGATCCTTCTATTGCTCACGAAGCCGGCAGATATGCTGCTTGCCTCATC 556
Query 540 CCAGGACTGTTTGCTTACGCTGTTCTGCAGCCGCTCACTCGCTACTTCCAAAACCAGAGC 599
|||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||
Sbjct 557 CCAGGACTGTTTGCTTACGCTGTTCTACAGCCTCTCACTCGCTACTTCCAAAACCAGAGC 616
Query 600 ATGATTACACCTCTCCTCATCACCTCTTGTGTTGTGTTCTGTCTCCACGTTCCTTTCTGC 659
|||||||||||||||||||||||||||||| |||||||||||||||| |||||| |||||
Sbjct 617 ATGATTACACCTCTCCTCATCACCTCTTGTTTTGTGTTCTGTCTCCATGTTCCTCTCTGC 676
Query 660 TGGCTTTTGGTTTACAAGTCAGGGCTTGGTAATCTTGGAGGAGCCTTAGCTCTCAGTTTG 719
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 677 TGGCTTTTGGTTTATAAGTCAGGGCTTGGTAATCTTGGAGGAGCCTTAGCTCTCAGTTTT 736
Query 720 TCAAACTGTCTCTATACCATTATCCTTGGATCTTTCATGTG-TTACTCCTCTGCCTGTTC 778
|| |||||||| ||||||||||||||||||||||| ||||| || |||||||||||||||
Sbjct 737 TCGAACTGTCTTTATACCATTATCCTTGGATCTTTAATGTGCTT-CTCCTCTGCCTGTTC 795
Query 779 TGAGACACGTGCACCACTCTCCATGGAGATATTCCATGGCATTGGAGAGTTCTTCAAATA 838
||||||||| ||||| ||||||||||||||||| | ||||||||||||||||||| |||
Sbjct 796 TGAGACACGCGCACCGCTCTCCATGGAGATATTTGACGGCATTGGAGAGTTCTTCAGATA 855
Query 839 TGCTCTGCCTTCTGCGGCTATGATTTGCCTGGAGTGGTGGTCATACGAACTCATAATATT 898
|||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 856 TGCTCTTCCTTCTGCGGCTATGATTTGCCTGGAGTGGTGGTCATATGAACTCATAATATT 915
Query 899 ACTCTCTGGTCTCTTACCCAACCCACAACTGGAGACTTCTGTGCTCTCTGTCTGTCTCCA 958
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 916 ACTCTCTGGTCTCTTACCCAACCCACAGCTGGAGACTTCTGTGCTCTCTGTCTGTCTCCA 975
Query 959 AACAACTGCGACAGTCTATTCGATACATCTTGCGATTGCAGCAGCAGCAAGCACAAGAAT 1018
||||||||||||||||||||||||||||||||| || ||||| |||||||||||||||||
Sbjct 976 AACAACTGCGACAGTCTATTCGATACATCTTGCAATCGCAGCTGCAGCAAGCACAAGAAT 1035
Query 1019 CTCAAATGAATTAGGAGCTGGAAACTCTCGAGCAGC-ACATATTGTGGTCTATGCAGCAA 1077
||||||||| ||||| |||||||||||||||||||| | ||||||||||||| |||||||
Sbjct 1036 CTCAAATGAGTTAGGTGCTGGAAACTCTCGAGCAGCTA-ATATTGTGGTCTACGCAGCAA 1094
Query 1078 TGTGTCTTGCGGTAATGGAGACATTGATATTGAGTACTTCTCTATTAGTTGGCAGGAATC 1137
||| |||||| ||| |||| | ||| ||||||||||||||||||||||| |||||||||
Sbjct 1095 TGTCTCTTGCAGTAGTGGAAATATTAATATTGAGTACTTCTCTATTAGTCGGCAGGAATG 1154
Query 1138 TTTTCGGCCATGTTTTCAGCAGTGACAAGGATACCATCGACTATGTTGCAAAGATGGCTC 1197
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 1155 TTTTCGGCCATGTTTTCAGCAGTGACAAGGAAACCATCGACTATGTTGCAAAGATGGCTC 1214
Query 1198 CATTGGTCTCTATTTCTCTCATACTGGACGGTTTACAAGGGGTTCTCTCAGGTATTGCAA 1257
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1215 CATTGGTCTCTATTTCTCTCATACTGGACGGTTTACAAGGGGTTCTCTCAGGTATTGCAA 1274
Query 1258 GGGGATGCGGATGGCAACAGATAGGGGCTTACATAAACTTAGGAGCTTTCTATCTCTGGG 1317
||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||
Sbjct 1275 GGGGATGCGGATGGCAACATATAGGAGCTTACATAAACTTAGGAGCTTTCTATCTCTGGG 1334
Query 1318 GGATACCCATTGCTGCATCTTTAGCCTTCTGGATTCATCTGAAAGGGGTTGGCCTTTGGA 1377
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 1335 GGATACCCATTGCTGCATCTTTAGCCTTCTGGATTCATCTGAAAGGTGTTGGCCTTTGGA 1394
Query 1378 TCGGAATCCAAGCCGGTGCCCTTCTGCAAACTCTTCTGCTGGCTCTTGTCACAGGCTGCA 1437
| |||||||||||||||||| |||||||||| |||||||| |||||||||| |||||||
Sbjct 1395 TTGGAATCCAAGCCGGTGCCGTTCTGCAAACGCTTCTGCTTACTCTTGTCACGGGCTGCA 1454
Query 1438 CAAACTGGGAAAACCAGGCCGATGAAGCGAGGAAGCGAATGGCTTTGGCCTATGGAACGT 1497
|||||||||||| |||||||||| ||||||| || |||||||||||||||||||||||||
Sbjct 1455 CAAACTGGGAAAGCCAGGCCGATAAAGCGAGAAATCGAATGGCTTTGGCCTATGGAACGT 1514
Query 1498 AAGGCGCTGCAGAACAGCTAAAGATTATAGAGA-CTATATGTTCCTCCGGTTTTACCATT 1556
||||||||||||||||||||||||| |||| || | ||| |||||||||||||||||| |
Sbjct 1515 AAGGCGCTGCAGAACAGCTAAAGATCATAGTGAGC-ATAGGTTCCTCCGGTTTTACCAGT 1573
Query 1557 TTTGTAGCAGACAAATTGGTGAATGTTACTTTGTGGCTAGTGAAAGGTCTTG-TTGTAAT 1615
|||||||||||| ||||| || |||||||||||||| || || ||||| ||| |||||||
Sbjct 1574 TTTGTAGCAGACGAATTGCTGTATGTTACTTTGTGGTTATTGGAAGGT-TTGGTTGTAAT 1632
Query 1616 AATACTGCATAATTTTCATCAGTAGTAATAAGCATCCTTC 1655
||||||||| |||||||||||||| |||||||||||||||
Sbjct 1633 AATACTGCACAATTTTCATCAGTATTAATAAGCATCCTTC 1672
> AT1G15170.1 | Symbols: | MATE efflux family protein | chr1:5220641-5222973
FORWARD LENGTH=1712
Length=1712
Score = 1932 bits (1046), Expect = 0.0
Identities = 1336/1476 (91%), Gaps = 19/1476 (1%)
Strand=Plus/Plus
Query 48 GCCATGGGAGACGCAGAGAGCACCTCCAA-AACTAGCTTGCTGCTGCCGGTGGAAAGGGT 106
|||||||||||||||||||||| || || | | |||||||||||||||| || || ||
Sbjct 47 GCCATGGGAGACGCAGAGAGCA-CT--AAGGA-TCGCTTGCTGCTGCCGGTAGAGAGAGT 102
Query 107 TGAGAACGTGACATGGAGAGATCTGCCAGACGGATCATTCACCGCT-GAACTCAAGAGGC 165
||||||||||||||||| ||||||| ||| || |||||||||| | |||||||| ||||
Sbjct 103 CGAGAACGTGACATGGAGCGATCTGCGAGATGGTTCATTCACCG-TAGAACTCAAAAGGC 161
Query 166 TCCTCTGCTTCGCCGCTCCTATGGCGGCTGTTGTTACCGCTCAGTTCATGTTGCAGATCA 225
| ||| |||||||||||||||||| |||||||||| ||||||||||||||| || |||
Sbjct 162 TTATCTTCTTCGCCGCTCCTATGGCTGCTGTTGTTATCGCTCAGTTCATGTTACAAATCG 221
Query 226 TCTCAATGGTTATGGTTGGTCACCTTGGTAATCTCTCCCTCGCTAGTGCCTCTCTCGCTT 285
| |||||| | |||||||||||||| || ||||||||||||||||| ||||||||||| |
Sbjct 222 TTTCAATGATGATGGTTGGTCACCTCGGCAATCTCTCCCTCGCTAGCGCCTCTCTCGCCT 281
Query 286 CCTCTTTCTGCAACGTCACTGGCTTCAGCTTCATTGTAGGATTGTCATGTGCCTTAGATA 345
|||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 282 CCTCCTTCTGCAACGTCACTGGCTTCAGCTTCATCATAGGATTGTCATGTGCCTTAGATA 341
Query 346 CTTTGA-TCGGTCAAGCTTATGGAGCTAAGCTCTATCGGAAAGTAGGAGTTCAGGCTTAC 404
|||||| | ||||||||||||||||||||||| || |||||| ||||||||||| |||||
Sbjct 342 CTTTGAGT-GGTCAAGCTTATGGAGCTAAGCTATACCGGAAACTAGGAGTTCAGACTTAC 400
Query 405 ACAGCAATGTTCTGTCTTGCATTAGTGTGTCTCCCTCTCACTGTCATATGGTTAAACATG 464
|| || |||||||||||||||||||||||||||||||| || |||| ||||| ||||||
Sbjct 401 ACTGCTATGTTCTGTCTTGCATTAGTGTGTCTCCCTCTTTCTCTCATTTGGTTCAACATG 460
Query 465 GAAACGCTTCTAGT-ATTCCTTGGCCAAGATCCTTCTATTGCTCACGAAGCCGGCAGATA 523
|||| |||||| | | ||||||||||||| ||||||||||||||||||||||| | |||
Sbjct 461 GAAAAGCTTCTTTTGA-TCCTTGGCCAAGACCCTTCTATTGCTCACGAAGCCGGAAAATA 519
Query 524 TGCTGCCTGCCTCATCCCAGGACTGTTTGCTTACGCTGTTCTGCAGCCGCTCACTCGCTA 583
||| |||| || ||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 520 TGCCACCTGGCTTATCCCAGGACTGTTTGCTTACGCTGTTCTACAGCCGCTCACTCGCTA 579
Query 584 CTTCCAAAACCAGAGCATGATTACACCTCTCCTCATCACCTCTTGTGTTGTGTTCTGTCT 643
||| ||||||||||| |||| |||||||||||||||||||| | ||||||||||||| |
Sbjct 580 CTTTCAAAACCAGAGTTTGATCACACCTCTCCTCATCACCTCCTATGTTGTGTTCTGTAT 639
Query 644 CCACGTTCCTTTCTGCTGGCTTTTGGTTTACAAGTCAGGGCTTGGTAATCTTGGAGGAGC 703
|||||||||| |||||||| ||||||||||||| ||||||||||||||||||||||||||
Sbjct 640 CCACGTTCCTCTCTGCTGGTTTTTGGTTTACAACTCAGGGCTTGGTAATCTTGGAGGAGC 699
Query 704 CTTAGCTCTCAGTTTGTCAAACTGTCTCTATACCATTATCCTTGGATCTTTCATGTGTTA 763
|| ||| |||||||||||||||| |||||| ||||| |||||||||||||||||| ||
Sbjct 700 TTTGGCTATCAGTTTGTCAAACTGGCTCTATGCCATTTTCCTTGGATCTTTCATGTACTA 759
Query 764 CTCCTCTGCCTGTTCTGAGACACGTGCACCACTCTCCATGGAGATATTCCATGGCATTGG 823
||||||||||||||||||||||||||| || |||||||||||||||||| ||||||||||
Sbjct 760 CTCCTCTGCCTGTTCTGAGACACGTGCGCCGCTCTCCATGGAGATATTCGATGGCATTGG 819
Query 824 AGAGTTCTTCAAATATGCTCTGCCTTCTGCGGCTATGATTTGCCTGGAGTGGTGGTCATA 883
||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||| ||
Sbjct 820 AGAGTTCTTCAAATATGCTCTTCCTTCTGCGGCTATGATTTGCCTAGAGTGGTGGTCTTA 879
Query 884 CGAACTCATAATATTACTCTCTGGTCTCTTACCCAACCCACAACTGGAGACTTCTGTGCT 943
||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 880 TGAACTTATAATATTACTCTCTGGTCTCTTACCCAACCCACAACTGGAGACTTCTGTGCT 939
Query 944 CTCTGTCTGTCTCCAAACAACTGCGACAGTCTATTCGATA-CATCTTGCGATTGCAGCAG 1002
|||||||||||| || |||| | | ||| | ||||||||| || || || || || || |
Sbjct 940 CTCTGTCTGTCTTCAGACAATTTCAACAATGTATTCGATACCA-CTAGCAATCGCGGCTG 998
Query 1003 CAGCAAGCACAAGAATCTCAAATGAATTAGGAGCTGGAAACTCTCGAGCAGCACATATTG 1062
||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |
Sbjct 999 CAGCAAGCACAAGAATCTCAAATGAATTAGGTGCTGGAAACTCTCGAGCAGCACATATCG 1058
Query 1063 TGGTCTATGCAGCAATGTGTCTTGCGGTAATGGA-GACATTGATA-TTGAGTACT-TCTC 1119
|||||||||| ||||||| |||||| || || || | |||||||| || |||| | ||||
Sbjct 1059 TGGTCTATGCGGCAATGTCTCTTGCAGTTATTGATG-CATTGATAGTT-AGTA-TGTCTC 1115
Query 1120 TATTAGTTGGCAGGAATCTTTTCGGCCATGTTTTCAGCAGTGACAAGGATACCATCGACT 1179
|| || | ||||||||||||||||| || ||||||||||||||||||| || |||||||
Sbjct 1116 TACTAATCGGCAGGAATCTTTTCGGGCACATTTTCAGCAGTGACAAGGAAACTATCGACT 1175
Query 1180 ATGTTGCAAAGATGGCTCCATTGGTCTCTATTTCTCTCATACTGGACGGTTTACAAGGGG 1239
|||||||||||||||||||||||||||||||||||||||| || |||| |||||||||||
Sbjct 1176 ATGTTGCAAAGATGGCTCCATTGGTCTCTATTTCTCTCATGCTTGACGCTTTACAAGGGG 1235
Query 1240 TTCTCTCAGGTATTGCAAGGGGATGCGGATGGCAACAGATAGGGGCTTACATAAACTTAG 1299
| ||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||
Sbjct 1236 TCCTCTCAGGTATTGCAAGGGGATGCGGATGGCAACATATAGGAGCTTACATAAACTTAG 1295
Query 1300 GAGCTTTCTATCTCTGGGGGATACCCATTGCTGCATCTTTAGCCTTCTGGATTCATCTGA 1359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1296 GAGCTTTCTATCTCTGGGGGATACCCATTGCTGCATCTTTAGCCTTCTGGATTCATCTGA 1355
Query 1360 AAGGGGTTGGCCTTTGGATCGGAATCCAAGCCGGTGCCCTTCTGCAAACTCTTCTGCTGG 1419
|||| |||||||||||||| |||||||||||||||||| |||||||||| |||||||| |
Sbjct 1356 AAGGTGTTGGCCTTTGGATTGGAATCCAAGCCGGTGCCGTTCTGCAAACGCTTCTGCTTG 1415
Query 1420 CTCTTGTCACAGGCTGCACAAACTGGGAAAACCAGGCCGATGAAGCGAGGAAGCGAATGG 1479
|||||||||| ||||| ||||||||||||| |||||||||| |||||||||| |||||||
Sbjct 1416 CTCTTGTCACGGGCTGTACAAACTGGGAAAGCCAGGCCGATAAAGCGAGGAATCGAATGG 1475
Query 1480 CTTTGGCCTATGGAACGTAAGGCGCTGCAGAACAGC 1515
|||||||||||||||| |||||||||||||||||||
Sbjct 1476 CTTTGGCCTATGGAACATAAGGCGCTGCAGAACAGC 1511
> AT1G15150.1 | Symbols: | MATE efflux family protein | chr1:5212615-5214858
FORWARD LENGTH=1658
Length=1658
Score = 1709 bits (925), Expect = 0.0
Identities = 1331/1522 (87%), Gaps = 48/1522 (3%)
Strand=Plus/Plus
Query 93 CCGGTGGAAAGGGTTGAGAACGTGACATGGAGAGATCTGCCAGACGGATCATTCACCGCT 152
||||| || || ||||||| ||||||||||||||||||| ||||||||| ||||||||
Sbjct 90 CCGGTAGACAGAATTGAGAAAGTGACATGGAGAGATCTGCAAGACGGATCTTTCACCGCA 149
Query 153 GAACTCAAGAGGCTCCTCTGCTTCGCCGCTCCTATGGCGGCTGTTGTTACCGCTCAGTTC 212
|||||||||||||| ||||||| || ||||||||||| || || |||| | |||||||
Sbjct 150 GAACTCAAGAGGCTTATCTGCTTTGCGGCTCCTATGGCTGCCGTGGTTATCATTCAGTTC 209
Query 213 ATGTTGCAGATCATCTCAATGGTTATGGTTGGTCACCTTGGTA-ATCTCTCCCTCGCTAG 271
||| | ||||| ||||||||||| ||||| |||||||| |||| | ||||||||||||||
Sbjct 210 ATGATACAGATAATCTCAATGGTGATGGTGGGTCACCTCGGTAGA-CTCTCCCTCGCTAG 268
Query 272 TGCCT-CTCTCGC-TTCCTCTTTCTGCAACGTCACTGGCTTCAGCTTCATTGTAGGATTG 329
|| | || |||| | ||| ||||| |||||||||||||||||||||||| ||||||||
Sbjct 269 CGCTTCCT-TCGCAGT-CTCCTTCTGTAACGTCACTGGCTTCAGCTTCATTATAGGATTG 326
Query 330 TCATGTGCCTTAGATACTTTGA-TCGGTCAAGCTTATGGAGCTAAGCTCTATCGGAAAGT 388
|||||||||||||||||||||| | ||||||||||||||||||||||| ||||||||| |
Sbjct 327 TCATGTGCCTTAGATACTTTGAGT-GGTCAAGCTTATGGAGCTAAGCTATATCGGAAACT 385
Query 389 AGGAGTTCAGGCTTACACAGCAATGTTCTGTCTTGCATTAGTGTGTCTCCCTCTCACTGT 448
||| ||||||||||||||||| |||||||||||| | |||||||||||||||||| || |
Sbjct 386 AGGTGTTCAGGCTTACACAGCTATGTTCTGTCTTACTTTAGTGTGTCTCCCTCTCTCTCT 445
Query 449 CATATGGTTAAACAT-GGAAACGCTTCTAGT-ATTCCTTGGCCAAGATCCTTCTATTGCT 506
| ||||||| ||||| ||||| |||| | || | ||||||||||||| ||| ||||||||
Sbjct 446 CCTATGGTTCAACATGGGAAA-GCTTATTGTGA-TCCTTGGCCAAGACCCTGCTATTGCT 503
Query 507 CACGAAGCCGGCAGATATGCTGCCTGCCTCATCCCAGGACTGTTTGCTTACGCTGTTCTG 566
|||||||| || |||||||| || || ||||||||||||||||| |||||||| |||||
Sbjct 504 CACGAAGCTGGTAGATATGCCGCTTGGCTCATCCCAGGACTGTTCGCTTACGCCGTTCTT 563
Query 567 CAGCCGCTCACTCGCTACTTCCAAAACCAGAGCATGATTACACCTCTCCTCATCACCTCT 626
|||||||||| |||||||||| ||||||||||| |||| |||||||||||| ||||||||
Sbjct 564 CAGCCGCTCATTCGCTACTTCAAAAACCAGAGCTTGATCACACCTCTCCTCGTCACCTCT 623
Query 627 TGTGTTGTGTTCTGTCTCCACGTTCCTTTCTGCTGGCTTTTGGTTTACAAGTCAGGGCTT 686
| ||||||||| ||| ||||||||||| ||||||||||||||||||| ||||||||||||
Sbjct 624 TCTGTTGTGTTTTGTATCCACGTTCCTCTCTGCTGGCTTTTGGTTTATAAGTCAGGGCTT 683
Query 687 GGTAATCTTGGAGGAGCCTTAGCTCTCAGTTTGTCAAACTGTCTCTATACCATTATCCTT 746
||| || ||||||||||||| |||||||| |||||| |||| |||||| ||||| |||||
Sbjct 684 GGTCATATTGGAGGAGCCTTGGCTCTCAGCTTGTCATACTGGCTCTATGCCATTTTCCTT 743
Query 747 GGATCTTTCATGTGTTACTCCTCTGCCTGTTCTGAGACACGTGCACCACTCT-CCATGGA 805
||||||||||||| |||||||||||||||||||||||||| || || || | |||||||
Sbjct 744 GGATCTTTCATGTACTACTCCTCTGCCTGTTCTGAGACACGCGCGCCGCT-TACCATGGA 802
Query 806 GATATTCCATGGCATTGGAGAGTTCT-TCAAATATGCTCTGCCTTCTGCGGCTATGATTT 864
||||||| | ||| || ||||||| | ||||||||||||| ||||||||||||||| |||
Sbjct 803 GATATTCGAGGGCGTTAGAGAGTT-TATCAAATATGCTCTTCCTTCTGCGGCTATGCTTT 861
Query 865 GCCTGGAGTGGTGGTCATACGAACTCATAATATTACTCTCTGGTCTCTTACCCAACCCAC 924
||||||||||||||||||| ||||||||||||||||| |||||||| |||||||||||||
Sbjct 862 GCCTGGAGTGGTGGTCATATGAACTCATAATATTACTTTCTGGTCTGTTACCCAACCCAC 921
Query 925 AACTGGAGACTTCTGTGCTCTCTGTCTGTCTCCAAACAAC-TGCGA-CAGTCTATTCGAT 982
| ||||||||||||||||||||| ||||| || |||| || | | | | | ||||| ||
Sbjct 922 AGCTGGAGACTTCTGTGCTCTCTATCTGTTTCGAAAC-ACTTTCAATAACT-TATTCAAT 979
Query 983 A-CATCTTGCGATTGCAGCAGCAGCAAGCACAAGAATCTCAAATGAATTAGGAGCTGGAA 1041
| || || ||||| || || |||||||||||||||||||||||||| |||||||||||||
Sbjct 980 ACCA-CTAGCGATCGCGGCTGCAGCAAGCACAAGAATCTCAAATGAGTTAGGAGCTGGAA 1038
Query 1042 ACTCTCGAGCAGCACATATTGTGGTCTATGCAGCAATGTGTCTTGCGGTAATGGA-GACA 1100
||||||||||||||||||||||||||||||| ||||||| |||||| |||||||| | ||
Sbjct 1039 ACTCTCGAGCAGCACATATTGTGGTCTATGCGGCAATGTCTCTTGCAGTAATGGATG-CA 1097
Query 1101 TTGATATTGAGTACT-TCTCTATTAGTTGGCAGGAATCTTTTCGGCCATGTTTTCAGCAG 1159
||||| |||||| | |||||||||| |||||| || ||||||||||||||||||||||
Sbjct 1098 TTGATGGTGAGTA-TGTCTCTATTAGCCGGCAGGCATGTTTTCGGCCATGTTTTCAGCAG 1156
Query 1160 TGACAAGGATACCATCGACTATGTTGCAAAGATGGCTCCATTGGTCTCTATTTCTCTCAT 1219
||||||| | |||||||| |||||||||||||||||||| ||||||||||||||| ||||
Sbjct 1157 TGACAAGAAAACCATCGAATATGTTGCAAAGATGGCTCCGTTGGTCTCTATTTCTATCAT 1216
Query 1220 ACTGGACGGTTTACAAGGGGTTCTCTCAGGTATTGCAAGGGGATGCGGATGGCAACAGAT 1279
||||||| ||||||||||||||||||||||| ||||||| |||||||| ||||| || ||
Sbjct 1217 ACTGGACAGTTTACAAGGGGTTCTCTCAGGTGTTGCAAGCGGATGCGGGTGGCAGCATAT 1276
Query 1280 AGGGGCTTACATAAACTTAGGAGCTTTCTATCTCTGGGGGATACCCATTGCTGCATCTTT 1339
|||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||
Sbjct 1277 AGGGGCTTACATAAACTTCGGAGCTTTCTATCTCTGGGGGATACCCATTGCAGCATCTTT 1336
Query 1340 AGCCTTCTGGATTCATCTGAAAGGGGTTGGCCTTTGGATCGGAATCCAAGCCGGTGCCCT 1399
|||||||||| ||||||||||||| |||||||||||||| ||||| | ||||||||| |
Sbjct 1337 AGCCTTCTGGGTTCATCTGAAAGGTGTTGGCCTTTGGATTGGAATACTAGCCGGTGCAGT 1396
Query 1400 TCTGCAAACTCTTCTGCTGGCTCTTGTCACAGGCTGCACAAACTGGGAAAACC-AGGCC- 1457
|||||| ||||||||||||||||||||||||||||||||||||||| |||||| |||||
Sbjct 1397 TCTGCAGACTCTTCTGCTGGCTCTTGTCACAGGCTGCACAAACTGG-AAAACCCAGGCCC 1455
Query 1458 GATGAAGCGAGGAAGCGAATGGCTTTGGCCTATG-----GAACGTA-AGGCGCTGCAGAA 1511
| |||||||||| ||||||||||| ||||| ||| |||| || || | | |||||
Sbjct 1456 G-TGAAGCGAGGGAGCGAATGGCTGTGGCCCATGAATCAGAACTTACAGA-G-T-CAGAA 1511
Query 1512 C-----AGCTAAAGATTATAGAGACT-ATATGTTCCTCCGGTTTTACCATTTTTGTAGCA 1565
| | |||| ||||| || ||| | |||||||||| |||||||||||||||||||
Sbjct 1512 CTTCCCATCTAA-GATTACAGGGACACAGATGTTCCTCCTATTTTACCATTTTTGTAGCA 1570
Query 1566 GACAAATTGGTGA-ATGTTACT 1586
| ||||| | | | ||||||||
Sbjct 1571 GCCAAATCGTT-ATATGTTACT 1591
> AT1G15160.1 | Symbols: | MATE efflux family protein | chr1:5215475-5217545
FORWARD LENGTH=1464
Length=1464
Score = 1709 bits (925), Expect = 0.0
Identities = 1249/1403 (89%), Gaps = 32/1403 (2%)
Strand=Plus/Plus
Query 105 GTTGAGAACGTGACATGGAGAGATCTGCCAGACGGATCATTCACCGCTGAACTCAAGAGG 164
|||||||| || |||||||||||||||| ||||||||| |||||||| |||||||||| |
Sbjct 43 GTTGAGAAAGTAACATGGAGAGATCTGCAAGACGGATCTTTCACCGCAGAACTCAAGAAG 102
Query 165 CTCCTCTGCTTCGCCGCTCCTATGGCGGCTGTTGTTACCGCTCAGTTCATGTTGCAGATC 224
|| | ||||| || ||||||||||| || || |||| | |||||| |||||| ||||||
Sbjct 103 CTTATATGCTTTGCGGCTCCTATGGCTGCCGTGGTTATCACTCAGTCCATGTTACAGATC 162
Query 225 ATCTCAATGGTTATGGTTGGTCACCTTGGTA-ATCTCTCCCTCGCTAGTGCCT-CTCTCG 282
|| ||||||| || || |||||||| || | | ||||| |||||||| || | || |||
Sbjct 163 ATAACAATGGTGATTGTGGGTCACCTCGGCAGA-CTCTCTCTCGCTAGCGCTTCCT-TCG 220
Query 283 -CTTCCTCTTTCTGCAACGTCACTGGCTTCAGCTTCATTGTAGGATTGTCATGTGCCTTA 341
| | ||| ||||| |||||||||||||||||||||||| | ||||||||||||||||||
Sbjct 221 CCAT-CTCCTTCTGTAACGTCACTGGCTTCAGCTTCATTATGGGATTGTCATGTGCCTTA 279
Query 342 GATACTTTGATCGGTCAAGCTTATGGAGCTAAGCTCTATCGGAAAGTAGGAGTTCAGGCT 401
|||||| | | ||||||||| |||||||||||||| ||||||||| |||| |||||||||
Sbjct 280 GATACTCTCAGCGGTCAAGCCTATGGAGCTAAGCTATATCGGAAACTAGGTGTTCAGGCT 339
Query 402 TACACAGCAATGTTCTGTCTTGCATTAGTGTGTCTCCCTCTCACTGTCATATGGTTAAAC 461
|||||||| |||||||||||| |||||||||||||||||||| || || ||||||| |||
Sbjct 340 TACACAGCTATGTTCTGTCTTACATTAGTGTGTCTCCCTCTCTCTCTCCTATGGTTCAAC 399
Query 462 AT-GGAAACGCTTCTAGT-ATTCCTTGGCCAAGATCCTTCTATTGCTCACGAAGCCGGCA 519
|| ||||| |||||| || | ||||||||||||| ||||| ||||| ||||||||||| |
Sbjct 400 ATGGGAAA-GCTTCTCGTGA-TCCTTGGCCAAGACCCTTCAATTGCACACGAAGCCGGAA 457
Query 520 GATATGCTGCCTGCCTCATCCCAGGACTGTTTGCTTACGCTGTTCTGCAGCCGCTCACTC 579
||| |||||| || |||||||||||||||||||||||||||||||| |||||||| ||||
Sbjct 458 GATTTGCTGCTTGGCTCATCCCAGGACTGTTTGCTTACGCTGTTCTACAGCCGCTTACTC 517
Query 580 GCTACTTCCAAAACCAGAGCATGATTACACCTCTCCTCATCACCTCTTGTGTTGTGTTCT 639
|||||||| ||||||||||| |||| ||||||||||| ||||||||||||||||||||||
Sbjct 518 GCTACTTCAAAAACCAGAGCTTGATAACACCTCTCCTTATCACCTCTTGTGTTGTGTTCT 577
Query 640 GTCTCCACGTTCCT-TTCTGCTGGCTTTTGGTTTACAAGTCAGGGCTTGGTAATCTTGGA 698
||||||| |||||| || || |||||||||||||| ||||||||||||| | || |||||
Sbjct 578 GTCTCCATGTTCCTCTT-TGTTGGCTTTTGGTTTATAAGTCAGGGCTTGATCATATTGGA 636
Query 699 GGAGCCTTAGCTCTCAGTTTGTCAAACTGTCTCTATACCAT-TATCCTTGGATCTTTCAT 757
|||||||| ||||||||||||||| |||| |||||| |||| | | ||||||||||||||
Sbjct 637 GGAGCCTTGGCTCTCAGTTTGTCATACTGGCTCTATGCCATCT-TTCTTGGATCTTTCAT 695
Query 758 GT-GTTACTCCTCTGCCTGTTCTGAGACACGTGCACCACTCT-CCATGGAGATATTCCAT 815
|| || ||||||||| |||||||||||||||||||| || | |||||||||||||| |
Sbjct 696 GTACTT-CTCCTCTGCTTGTTCTGAGACACGTGCACCGCT-TACCATGGAGATATTCGAG 753
Query 816 GGCATTGGAGAGTTCT-TCAAATATGCTCTGCCTTCTGCGGCTATGATTTGCCTGGAGTG 874
||| || ||||||| | ||||||||||||| ||||||||||||||| ||||||| |||||
Sbjct 754 GGCGTTAGAGAGTT-TATCAAATATGCTCTTCCTTCTGCGGCTATGCTTTGCCTAGAGTG 812
Query 875 GTGGTCATACGAACTCATAATATTACTCTCTGGTCTCTTACCCAACCCACAACTGGAGAC 934
|||||| || ||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 813 GTGGTCTTATGAACTCATAATATTACTATCTGGTCTCTTACCCAACCCACAACTGGAGAC 872
Query 935 TTCTGTGCTCTCTGTCTGTCTCCAAACAACTG-CGACAGTCT-ATTCGATAC-ATCTTGC 991
|||||||||||||||||||||||||||| || ||| | || ||||||||| | || ||
Sbjct 873 TTCTGTGCTCTCTGTCTGTCTCCAAACA-CTTTCGAT-GACTTATTCGATACCA-CTAGC 929
Query 992 GATTGCAGCAGCAGCAAGCACAAGAATCTCAAATGAATTAGGAGCTGGAAACTCTCGAGC 1051
||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 930 GATTGCAGCTGCAGCAAGCACAAGAATCTCAAATGAATTAGGTGCTGGAAACTCTCGAGC 989
Query 1052 AGCACATATTGTGGTCTATGCAGCAATGTGTCTTGCGGTAATGGA-GACATTGATATTGA 1110
|||||||||||||||||| || ||||||| |||||| ||| |||| | ||||||| ||
Sbjct 990 AGCACATATTGTGGTCTACGCGGCAATGTCTCTTGCAGTAGTGGATG-CATTGATGGTGG 1048
Query 1111 GTACTTCTCTATTAGTTGGCAGGAATCTTTTCGGCCATGTTTTCAGCAGTGACAAGGATA 1170
|||| |||||||||| ||| | |||||| || ||||| |||||||||||||||||| |||
Sbjct 1049 GTACGTCTCTATTAGCTGGTAAGAATCTGTTGGGCCAAGTTTTCAGCAGTGACAAGAATA 1108
Query 1171 CCATCGACTATGTTGCAAAGATGGCTCCATTGGTCTCTATTTCTCTCATACTGGACGGTT 1230
||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||
Sbjct 1109 CCATCGACTATGTTGCAAAGATGGCTCCACTGGTCTCTATTTCTCTCATACTGGACAGTT 1168
Query 1231 TACAAGGGGTTCTCTCAGGTATTGCAAGGGGATGCGGATGGCAACAGATAGGGGCTTACA 1290
|||||||||||||||||||| ||||||| |||||||| ||||| || |||||||||||||
Sbjct 1169 TACAAGGGGTTCTCTCAGGTGTTGCAAGCGGATGCGGGTGGCAGCATATAGGGGCTTACA 1228
Query 1291 TAAACTTAGGAGCTTTCTATCTCTGGGGGATACCCATTGCTGCATCTTTAGCCTTCTGGA 1350
||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1229 TAAACTTTGGAGCTTTCTATCTCTGGGGGATACCCATTGCTGCATCTTTAGCCTTCTGGG 1288
Query 1351 TTCATCTGAAAGGGGTTGGCCTTTGGATCGGAATCCA-AGCCGGTGCCCTTCTGCAAACT 1409
||||||||||||| |||||||||||||| ||||| | |||||||||| |||||||||||
Sbjct 1289 TTCATCTGAAAGGTGTTGGCCTTTGGATTGGAATA-ATAGCCGGTGCCGTTCTGCAAACT 1347
Query 1410 CTTCTGCTGGCTCTTGTCACAGGCTGCACAAACTGGGAAAACCAGGC-CGATGAAGCGAG 1468
|||||||||||||||||||||||||||| |||||||||||||||||| || |||||||||
Sbjct 1348 CTTCTGCTGGCTCTTGTCACAGGCTGCATAAACTGGGAAAACCAGGCTCG-TGAAGCGAG 1406
Query 1469 GAAGCGAATGGCTTTGGCCTATG 1491
||||||||||||| ||||| |||
Sbjct 1407 GAAGCGAATGGCTGTGGCCCATG 1429
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 81776687805
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5