BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg471773
Length=3851
Score E
Sequences producing significant alignments: (Bits) Value
AT1G15750.1 | Symbols: WSIP1, TPL | Transducin family protein /... 6185 0.0
AT1G80490.2 | Symbols: TPR1 | TOPLESS-related 1 | chr1:30260903... 2495 0.0
> AT1G15750.1 | Symbols: WSIP1, TPL | Transducin family protein
/ WD-40 repeat family protein | chr1:5414817-5420630 REVERSE
LENGTH=3829
Length=3829
Score = 6185 bits (3349), Expect = 0.0
Identities = 3588/3700 (97%), Gaps = 29/3700 (1%)
Strand=Plus/Plus
Query 171 GAGATGCGAAGTTTCTGGATATTTTTTCAGATATAGATCTGGTGATAGTTTTGG-TAGGT 229
||||||||||||||||||||| || ||||||||||||||||||||||| ||||| ||| |
Sbjct 57 GAGATGCGAAGTTTCTGGATAATTATTCAGATATAGATCTGGTGATAG-TTTGGTTAGTT 115
Query 230 GTTGTGAATC-----T-G-----A----TTTAAGGAAGTGAGaaaaaaaCATGTCTTCTC 274
|||||| ||| | | | |||||||||||||| | |||||||||||||||
Sbjct 116 GTTGTGCATCTGAGTTAGAAAAAAGTCTTTTAAGGAAGTGAG-AGAAAACATGTCTTCTC 174
Query 275 TTAGTAGAGAGCTCGTTTTCTTGATCTTACAGTTTCTTGATGAAGAGAAGTTTAAAGAGA 334
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 175 TTAGTAGAGAGCTCGTTTTCTTGATCTTACAGTTTCTCGATGAAGAGAAGTTTAAAGAGA 234
Query 335 CTGTTCACAAGCTTGAACAAGAATCTGGGTTTTTCTTCAATATGAAGTATTTTGAGGATG 394
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 235 CTGTTCACAAGCTTGAACAAGAATCTGGGTTTTTCTTCAATATGAAGTATTTTGAGGATG 294
Query 395 AGGTGCACAATGGTAATTGGGATGAGGTTGAGAAGTATCTCTCTGGTTTCACTAAAGTAG 454
|||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 295 AGGTTCACAATGGAAATTGGGATGAGGTTGAGAAGTATCTCTCTGGTTTCACTAAAGTAG 354
Query 455 ATGATAATAGATACTCTATGAAGATATTCTTCGAGATAAGAAAGCAGAAGTATCTCGAGG 514
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 355 ATGATAATAGATACTCTATGAAGATATTCTTCGAGATAAGAAAGCAGAAGTATCTCGAGG 414
Query 515 CTTTGGATAAGCATGATCGTCCCAAGGCTGTGGATATACTAGTGAAGGATTTGAAAGTGT 574
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 415 CTTTGGATAAGCATGATCGTCCCAAGGCTGTGGATATACTAGTGAAGGATTTGAAAGTGT 474
Query 575 TTTCAACTTTTAATGAGGAGCTTTTCAAGGAAATAACGCAGCTCTTGACATTGGAGAACT 634
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 475 TTTCAACTTTTAATGAGGAGCTTTTCAAGGAAATAACACAGCTCTTGACATTGGAGAACT 534
Query 635 TCCGGGAGAATGAACAGTTGTCCAAGTATGGGGACACCAAGTCTGCAAGAGCTATAATGT 694
||||||||||||||||||| |||||||||||||||||||||||||||||||| || ||||
Sbjct 535 TCCGGGAGAATGAACAGTTATCCAAGTATGGGGACACCAAGTCTGCAAGAGCGATCATGT 594
Query 695 TGGTGGAACTCAAAAAGCTGATTGAGGCGAATCCGTTGTTCCGTGATAAATTGCAGTTCC 754
|||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||
Sbjct 595 TGGTGGAACTCAAAAAGCTGATTGAGGCGAATCCTTTATTCCGTGATAAATTGCAGTTCC 654
Query 755 CTACTCTTAGAAATTCAAGGCTGAGGACTTTGATCAACCAGAGCTTAAATTGGCAGCATC 814
||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |
Sbjct 655 CTACTCTTAGAAATTCAAGGCTGAGGACTTTGATCAACCAGAGCTTAAATTGGCAACACC 714
Query 815 AGCTTTGTAAAAATCCAAGGCCAAATCCAGATATAAAGACTCTTTTTGTGGATCACTCTT 874
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 715 AGCTTTGTAAAAATCCAAGGCCAAATCCAGATATCAAGACTCTTTTTGTGGATCACTCTT 774
Query 875 GTGGCCCTCCAAATGGCGCACGGGCTCCATCGCCTGTGAACAATCCTCTGCTTGGAGGAA 934
|||||||||||||||||||||| |||||||| |||||||||||||| ||||||||||| |
Sbjct 775 GTGGCCCTCCAAATGGCGCACGAGCTCCATCTCCTGTGAACAATCCACTGCTTGGAGGGA 834
Query 935 TACCAAAGGCTGGAGGATTTCCTCCTTTAGGCGCACACGGGCCATTTCAACCAACGGCAT 994
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 835 TACCAAAGGCTGGAGGATTTCCTCCTTTAGGCGCACACGGGCCATTTCAACCAACGGCGT 894
Query 995 CACCCGTTCCAACGCCTCTTGCTGGTTGGATGTCTAGTCCATCCTCTGTCCCACATCCAG 1054
|||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 895 CACCTGTTCCAACACCTCTTGCTGGTTGGATGTCTAGTCCATCCTCTGTCCCACATCCAG 954
Query 1055 CTGTCTCAGCAGGAGCCATTGCACTTGGTGGTCCATCAATCCCAGCGGCATTGAAGCACC 1114
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 955 CTGTCTCAGCAGGAGCCATTGCACTTGGTGGTCCATCAATCCCAGCGGCGTTGAAGCACC 1014
Query 1115 CGAGAACTCCTCCAACTAATGCTGCTTTAGACTACCCGTCAGCAGATTCTGAACATGTCT 1174
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 1015 CGAGAACTCCTCCAACTAATGCTTCTTTAGACTACCCGTCAGCAGATTCTGAACATGTCT 1074
Query 1175 CAAAAAGAACAAGGCCAATGGGAATTTCTGACGAGGTGAATCTAGGCGTGAACATGTTAC 1234
||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 1075 CAAAAAGAACAAGACCAATGGGAATCTCTGACGAGGTGAATCTAGGCGTGAACATGTTAC 1134
Query 1235 CGATGTCATTTTCAGGGCAGGCCCATGGTCATACTCCGGCTTTCAAAGCACCTGATGACT 1294
|||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||
Sbjct 1135 CGATGTCATTTTCAGGGCAGGCCCATGGTCATTCTCCGGCTTTCAAAGCACCTGACGACT 1194
Query 1295 TGCCCAAGACAGTTGCGCGAACTTTGAGTCAGGGCTCATCTCCCATGAGCATGGATTTCC 1354
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 1195 TGCCCAAGACAGTTGCGAGAACTTTGAGTCAGGGCTCATCTCCCATGAGCATGGATTTCC 1254
Query 1355 ATCCAATTAAACAGACTCTGCTTCTAGTTGGTACAAATGTAGGTGATATCGGGCTGTGGG 1414
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 1255 ATCCAATTAAACAGACCCTGCTTCTAGTTGGTACAAATGTAGGTGATATCGGGCTGTGGG 1314
Query 1415 AAGTTGGTTCTCGCGAAAGATTAGTACAGAAGACCTTCAAAGTCTGGGATTTGAGTAAAT 1474
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 1315 AAGTTGGTTCTCGCGAAAGATTAGTACAGAAGACGTTCAAAGTCTGGGATTTGAGTAAAT 1374
Query 1475 GTTCAATGCCCTTGCAGGCTGCTCTGGTGAAAGAACCTGTCGTTTCTGTCAACCGTGTGA 1534
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1375 GTTCAATGCCCTTGCAGGCTGCTCTGGTGAAAGAACCTGTCGTTTCTGTCAACCGTGTGA 1434
Query 1535 TATGGAGCCCTGACGGTTCCTTGTTTGGAGTTGCTTACTCGAGACATATTGTGCAACTAT 1594
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 1435 TATGGAGCCCTGACGGTTCCTTGTTTGGAGTTGCTTACTCGAGACATATTGTACAACTAT 1494
Query 1595 ACTCTTATCACGGAGGTGAAGACATGAGGCAACACCTGGAGATTGATGCTCATGTTGGTG 1654
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 1495 ACTCTTATCACGGAGGTGAAGACATGAGGCAACACCTTGAGATTGATGCTCATGTTGGTG 1554
Query 1655 GTGTGAACGATATTTCCTTCTCGACTCCGAACAAGCAACTATGTGTAATAACTTGTGGTG 1714
||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 1555 GTGTGAATGATATTTCCTTCTCGACTCCAAACAAGCAACTATGTGTAATAACTTGTGGTG 1614
Query 1715 ATGACAAAACCATCAAGGTTTGGGACGCTGCAACAGGTGTCAAAAGGCATACTTTTGAAG 1774
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1615 ATGACAAAACCATCAAGGTTTGGGACGCTGCAACAGGTGTCAAAAGGCATACTTTTGAAG 1674
Query 1775 GCCATGAAGCTCCTGTTTATTCCGTTTGTCCTCATTACAAGGAAAACATTCAGTTCATAT 1834
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1675 GCCATGAAGCTCCTGTTTATTCCGTTTGTCCTCATTACAAGGAAAACATTCAGTTCATAT 1734
Query 1835 TTTCAACAGCTCTTGATGGGAAAATTAAGGCATGGTTGTATGATAATATGGGTTCCCGAG 1894
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 1735 TTTCAACAGCTCTTGATGGGAAAATTAAGGCTTGGTTGTATGATAATATGGGTTCCCGAG 1794
Query 1895 TTGACTATGATGCACCTGGTCGCTGGTGTACTACAATGGCTTATAGTGCCGATGGTACTA 1954
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1795 TTGACTATGATGCACCTGGTCGCTGGTGTACTACAATGGCTTATAGTGCCGATGGTACTA 1854
Query 1955 GGCTATTCTCTTGTGGGACGAGTAAAGATGGAGAGTCTTTCATTGTTGAGTGGAATGAAA 2014
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1855 GGCTATTCTCTTGTGGGACGAGTAAAGATGGAGAGTCTTTCATTGTTGAGTGGAATGAAA 1914
Query 2015 GCGAAGGAGCTGTTAAAAGAACTTATCAAGGATTCCACAAGCGTTCTCTAGGTGTTGTGC 2074
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1915 GCGAAGGAGCTGTTAAAAGAACTTATCAAGGATTCCACAAGCGTTCTCTAGGTGTTGTGC 1974
Query 2075 AGTTTGATACAACTAAAAACCGTTATCTAGCTGCGGGTGATGACTTCTCCATCAAGTTCT 2134
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 1975 AGTTTGATACAACTAAAAACCGTTATCTAGCTGCGGGTGATGATTTCTCCATCAAGTTCT 2034
Query 2135 GGGATATGGACACTGTACAGCTTTTAACTGCCATTGATGGCGATGGAGGCCTCCAGGCAA 2194
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2035 GGGATATGGACGCTGTACAGCTTTTAACTGCCATTGATGGCGATGGAGGCCTCCAGGCAA 2094
Query 2195 GCCCGCGTATCCGGTTTAACAAGGAAGGCTCTCTCTTGGCCGTGTCTGGAAACGAGAATG 2254
|||||||||||||||| |||||||||||||||||| ||||||||||||| ||||||||||
Sbjct 2095 GCCCGCGTATCCGGTTCAACAAGGAAGGCTCTCTCCTGGCCGTGTCTGGCAACGAGAATG 2154
Query 2255 TGATCAAGATTATGGCAAACTCAGATGGTCTAAGGCTATTGCACACTTTTGAGAACATAT 2314
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2155 TGATCAAGATTATGGCAAACTCAGATGGTCTAAGGCTATTGCACACTTTTGAGAACATAT 2214
Query 2315 CATCTGAATCCTCTAAGCCTGCAATAAACAGCATTGCAGCGGCAGCGGCAGCTGCTGCAA 2374
||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 2215 CATCTGAATCCTCCAAGCCTGCAATAAACAGCATAGCAGCGGCAGCGGCAGCTGCTGCAA 2274
Query 2375 CGAGTGCTGGTCACGCAGATCGATCAGCCAATGTAGTTTCCATCCAAGGAATGAATGGAG 2434
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2275 CAAGTGCTGGTCACGCAGATCGATCAGCCAATGTAGTTTCCATCCAAGGAATGAATGGAG 2334
Query 2435 ATTCGCGGAATATGGTGGATGTGAAGCCAGTGATTACTGAAGAATCAAATGATAAGTCTA 2494
|||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||
Sbjct 2335 ATTCGCGGAATATGGTGGATGTGAAGCCAGTGATCACAGAAGAATCAAATGATAAGTCTA 2394
Query 2495 AGATATGGAAGCTTACTGAAGTCAGCGAGCCTTCTCAATGCAGGTCACTGAGACTCCCTG 2554
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2395 AGATATGGAAGCTTACTGAAGTCAGCGAGCCTTCTCAATGCAGGTCACTGAGACTCCCTG 2454
Query 2555 AGAATCTGAGAGTCGCCAAGATATCAAGATTGATTTTCACGAATTCGGGAAACGCTATTT 2614
||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 2455 AGAATCTGAGAGTAGCCAAGATATCAAGATTGATTTTCACGAATTCGGGAAATGCTATTT 2514
Query 2615 TGGCTTTGGCATCAAACGCCATTCATCTTCTATGGAAATGGCAGCGGAATGAGCGCAACG 2674
||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 2515 TGGCTCTGGCATCAAACGCAATTCATCTTCTATGGAAATGGCAGCGGAATGAGCGCAACG 2574
Query 2675 CAACTGGAAAGGCGACAGCTTCTTTACCGCCTCAGCAGTGGCAACCAGCTAGTGGGATAC 2734
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 2575 CAACTGGAAAGGCGACAGCTTCTTTACCGCCTCAGCAGTGGCAACCAGCTAGTGGGATCC 2634
Query 2735 TAATGACTAACGACGTTGCTGAAACCAATACTACCGAGGAAGCTGTACCTTGTTTTGCTT 2794
| ||||||||||| ||||||||||||||| | |||||||||||||||||||||||||||
Sbjct 2635 TCATGACTAACGATGTTGCTGAAACCAAT-C--CCGAGGAAGCTGTACCTTGTTTTGCTT 2691
Query 2795 TATCCAAGAATGATTCATATGTAATGTCAGCCTCCGGAGGAAAGATCTCCTTATTTAACA 2854
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 2692 TATCCAAGAATGATTCATATGTAATGTCAGCCTCCGGAGGAAAGATATCCTTATTTAACA 2751
Query 2855 TGATGACGTTTAAGACAATGGCGACTTTTATGCCCCCACCGCCGGCTGCAACTTTTCTTG 2914
|||||||||||||||||||||||||||| ||||||||||| |||||||| ||||||||||
Sbjct 2752 TGATGACGTTTAAGACAATGGCGACTTTCATGCCCCCACCACCGGCTGCTACTTTTCTTG 2811
Query 2915 CTTTTCATCCTCAAGACAACAATATCATTGCTATCGGAATGGATGATAGCACGATTCAGA 2974
|||||||||||||||||||||||||||| ||||| || ||||||||||||||||||||||
Sbjct 2812 CTTTTCATCCTCAAGACAACAATATCATCGCTATTGGGATGGATGATAGCACGATTCAGA 2871
Query 2975 TTTATAACGTCCGTGTTGATGAGGTGAAGAGTAAGCTTAAAGGTCATTCAAAGAGAATAA 3034
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2872 TTTATAATGTCCGTGTTGATGAGGTGAAGAGTAAGCTTAAAGGTCATTCAAAGAGAATAA 2931
Query 3035 CTGGTCTTGCCTTCTCCAACGTATTAAATGTGTTGGTTTCGTCTGGAGCAGATGCACAGC 3094
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 2932 CTGGTCTTGCCTTCTCCAACGTATTAAACGTGTTGGTTTCGTCTGGAGCAGATGCACAGC 2991
Query 3095 TCTGTGTTTGGAACACAGATGGATGGGAAAAGCAGAGAAGCAAGGTTTTGCCACTTCCAC 3154
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2992 TTTGTGTTTGGAACACAGATGGATGGGAAAAGCAGAGAAGCAAGGTTTTGCCACTTCCAC 3051
Query 3155 AGGGAAGACCAAACAGTGCACCTTCAGATACGCGTGTTCAGTTCCATCAAGATCAAGCTC 3214
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3052 AGGGAAGACCAAACAGTGCACCTTCAGATACGCGTGTTCAGTTCCATCAAGATCAAGCTC 3111
Query 3215 ACTTCCTCGTTGTGCACGAGACGCAGCTCGCTATATACGAAACGACCAAGCTCGAATGCA 3274
||||||||||||||||||||||||| || |||||||||||||| ||||||||||||||||
Sbjct 3112 ACTTCCTCGTTGTGCACGAGACGCAACTTGCTATATACGAAACTACCAAGCTCGAATGCA 3171
Query 3275 TGAAACAGTGGGCTGTACGAGAATCATTAGCTCCAATCACTCATGCCACATTCTCATGCG 3334
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 3172 TGAAACAGTGGGCTGTTCGAGAATCATTAGCTCCAATCACTCATGCCACATTCTCATGCG 3231
Query 3335 ATAGCCAATTGGTCTACGCGAGTTTTATGGATGCAACAGTTTGTGTATTTAGCTCTGCAA 3394
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3232 ATAGCCAATTGGTCTACGCGAGTTTTATGGATGCAACAGTTTGTGTATTTAGCTCTGCAA 3291
Query 3395 ATCTAAGATTGCGTTGCCGGGTCAACCCTTCTGCGTATCTACCAGCTAGTCTCAGCAATT 3454
||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3292 ATCTACGGCTGCGTTGCCGGGTCAACCCTTCTGCGTATCTACCAGCTAGTCTCAGCAATT 3351
Query 3455 CAAACGTACATCCACTAGTGATTGCGGCACATCCGCAAGAACCAAACATGTTTGCAGTTG 3514
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 3352 CAAACGTACATCCACTAGTGATTGCTGCACATCCGCAAGAACCAAACATGTTTGCAGTTG 3411
Query 3515 GTCTCTCAGACGGGGGAGTGCACATATTCGAACCGCTCGAGTCTGAAGGTAAATGGGGAG 3574
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3412 GTCTCTCAGACGGGGGAGTGCACATATTCGAACCGCTCGAGTCTGAAGGTAAATGGGGAG 3471
Query 3575 TCGCTCCACCTGCTGAGAACGGGTCGGCTAGCGGGGCAGCCA-CTGCACCTTCCGTTGGA 3633
|||||||||| ||||||||||||||||||||||| ||| ||| |||||||||||||||||
Sbjct 3472 TCGCTCCACCGGCTGAGAACGGGTCGGCTAGCGGTGCA-CCAACTGCACCTTCCGTTGGA 3530
Query 3634 GCCTCTGCATCTGATCAGCCTCAGAGATGATCTGAGCCGAGAGTCACCTACCTCTCTGAT 3693
||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||
Sbjct 3531 GCCTCTGCATCTGATCAGCCTCAGAGATGATCTGATCCGAGAGCCACCTACCTCTCTGAT 3590
Query 3694 TCCctttcttctttttaaaagtctttctttttattttatttttttGGTAGAAAGATTTAT 3753
|||||||||||| ||||||||||||| | ||| || |||||||||||||||| ||||||
Sbjct 3591 TCCCTTTCTTCTATTTAAAAGTCTTT-TCTTTCTT--ATTTTTTTGGTAGAAAAATTTAT 3647
Query 3754 GACCCAAAGATTCT-AACATTTAGATGTAACATATTATTCACAGTAATTCAGTAGTAAAG 3812
|||||| ||||||| ||||||||||||||||||||| ||||||||||||||||||| |||
Sbjct 3648 GACCCAGAGATTCTTAACATTTAGATGTAACATATT-TTCACAGTAATTCAGTAGTGAAG 3706
Query 3813 TT-GGATAAAAACAGTGACTGATGTTGTTTCTCTCTCTTT 3851
|| |||||||||||||||||||||||||||||||||||||
Sbjct 3707 TTTGGATAAAAACAGTGACTGATGTTGTTTCTCTCTCTTT 3746
> AT1G80490.2 | Symbols: TPR1 | TOPLESS-related 1 | chr1:30260903-30267038
REVERSE LENGTH=3787
Length=3787
Score = 2495 bits (1351), Expect = 0.0
Identities = 1848/2093 (88%), Gaps = 14/2093 (1%)
Strand=Plus/Plus
Query 264 CATGTCTTCTCTTAGTAGAGAGCTCGTTTTCTTGATCTTACAGTTTCTT-GATGAAGAGA 322
|||||||||||| || ||||||||||| |||||||||||||||||| || ||||||||||
Sbjct 233 CATGTCTTCTCTGAGCAGAGAGCTCGTCTTCTTGATCTTACAGTTT-TTAGATGAAGAGA 291
Query 323 AGTTTAAAGAGACTGTTCACAAGCTTGAACAAGAATCTGGGTTTTTCTTCAATATGAAGT 382
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 292 AGTTTAAAGAGACTGTTCATAAGCTTGAACAAGAATCTGGGTTTTTCTTCAATATGAAGT 351
Query 383 ATTTTGAGGATGAGGTGCACAATGGTAATTGGGATGAGGTTGAGAAGTATCTCTCTGGTT 442
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 352 ATTTTGAGGATGAGGTGCACAATGGTAACTGGGATGAGGTTGAGAAGTATCTCTCTGGTT 411
Query 443 TCACTAAAGTAGATGATAATAGATACTCTATGAAGATATTCTTCGAGATAAGAAAGCAGA 502
| |||||||| ||||||||| ||||||| |||||||| ||||||||||| || |||||||
Sbjct 412 TTACTAAAGTTGATGATAATCGATACTCCATGAAGATTTTCTTCGAGATTAGGAAGCAGA 471
Query 503 AGTATCTCGAGGCTTTGGATAAGCATGATCGTCCCAAGGCTGTGGATATACTAGTGAAGG 562
||||||||||||| ||||||| ||||||||||||||||||||| ||||| |||| || |
Sbjct 472 AGTATCTCGAGGCCTTGGATAGGCATGATCGTCCCAAGGCTGTCGATATTTTAGTCAAAG 531
Query 563 ATTTGAAAGTGTTTTCAACTTTTAATGAGGAGCTTTTCAAGGAAATAACGCAGCTCTTGA 622
|||||||||||||||| ||||||||||||||||||||||||||||| || ||||||||||
Sbjct 532 ATTTGAAAGTGTTTTCCACTTTTAATGAGGAGCTTTTCAAGGAAATCACTCAGCTCTTGA 591
Query 623 CATTGGAGAACTTCCGGGAGAATGAACAGTTGTCCAAGTATGGGGACACCAAGTCTGCAA 682
| || || |||||| ||||||| || ||||| ||||||||||||||||| ||||| || |
Sbjct 592 CCTTAGAAAACTTCAGGGAGAACGAGCAGTTATCCAAGTATGGGGACACAAAGTCCGCCA 651
Query 683 GAGCTATAATGTTGGTGGAACTCAAAAAGCTGATTGAGGCGAATCCGTTGTTCCGTGATA 742
||||||| ||||||||||||||||| ||| ||||||| || ||||| || ||||||||||
Sbjct 652 GAGCTATCATGTTGGTGGAACTCAAGAAGTTGATTGAAGCTAATCCTTTATTCCGTGATA 711
Query 743 AATTGCAGTTCCCTACTCTTAGAAATTCAAGGCTGAGGACTTTGATCAACCAGAGCTTAA 802
|||||||||| ||||| ||||||| |||| | || |||||| |||| || ||||||||||
Sbjct 712 AATTGCAGTTTCCTACCCTTAGAACTTCACGCCTCAGGACTCTGATTAATCAGAGCTTAA 771
Query 803 ATTGGCAGCATCAGCTTTGTAAAAATCCAAGGCCAAATCCAGATATAAAGACTCTTTTTG 862
||||||| || ||||||||||| || |||||||| ||||| ||||| |||||||| ||||
Sbjct 772 ATTGGCAACACCAGCTTTGTAAGAACCCAAGGCCTAATCCTGATATTAAGACTCTCTTTG 831
Query 863 TGGATCACTCTTGTGGCCCT-CCAAATGGCGCACGGGCTCCATCGCCTGTGAACAATCCT 921
| ||||| || || ||| | ||||||| ||||| || ||||| ||||| ||||||||
Sbjct 832 TCGATCATTCCTGCCGCC-TACCAAATGATGCACGAGCACCATCCCCTGTCAACAATCCG 890
Query 922 CTGCTTGGAGGAATACCAAAGGCTGGAGG-ATTTCCTCCTTTAGGCGCACACGGGCCATT 980
|| |||||| | ||||||| || | ||| |||||||||| |||||||||||||||| ||
Sbjct 891 CTTCTTGGATCATTACCAAAAGCCG-AGGGATTTCCTCCTCTAGGCGCACACGGGCCTTT 949
Query 981 TCAACCAACGGCATCACCCGTTCCAACGCCTCTTGCTGGTTGGATGTCTAGTCCATCCTC 1040
||||||||| | || || ||||| || |||||||||||||||||||||||||| |||||
Sbjct 950 TCAACCAACACCTTCTCCGGTTCCGACACCTCTTGCTGGTTGGATGTCTAGTCCTTCCTC 1009
Query 1041 TGTCCCACATCCAGCTGTCTCAGCAGGAGCCATTGCACTTGGTGGTCCATCAATCCCAGC 1100
|||||||||||||||||| || | |||| ||||||| ||||||| |||||| |||| |||
Sbjct 1010 TGTCCCACATCCAGCTGTGTCTGGAGGACCCATTGCTCTTGGTGCTCCATCCATCCAAGC 1069
Query 1101 GGCATTGAAGCACCCGAGAACTCCTCCAACTAATGCTGCTTTAGACTACCCGTCAGCAGA 1160
|| ||||| ||||||||||||||||| ||||| | ||| ||||||| || |||| ||
Sbjct 1070 AGCCTTGAAACACCCGAGAACTCCTCCTTCTAATTCCGCTGTAGACTATCCATCAGGTGA 1129
Query 1161 TTCTGAACATGTCTCAAAAAGAACAAGGCCAATGGGAATTTCTGACGAGGTGAATCTAGG 1220
|| || ||||||||||| |||| || || |||||||| ||||||||||||| ||||||
Sbjct 1130 CTCAGACCATGTCTCAAAGCGAACCAGACCTATGGGAATCTCTGACGAGGTGAGTCTAGG 1189
Query 1221 CGTGAACATGTTACCGATGTCATTTTCAGGGCAGGCCCATGGTCATACTCCGGCTTTCAA 1280
|||||||||||||| ||| |||| | |||||||| |||||||||| || | |||||
Sbjct 1190 TGTGAACATGTTACCAATGACATTCCCGGGGCAGGCTCATGGTCATAATCAAACCTTCAA 1249
Query 1281 AGCACCTGATGACTTGCCCAAGACAGTTGCGCGAACTTTGAGTCAGGGCTCATCTCCCAT 1340
|||||||||||||||||||||||||||||| ||||||||||| || ||||||||||||||
Sbjct 1250 AGCACCTGATGACTTGCCCAAGACAGTTGCACGAACTTTGAGCCAAGGCTCATCTCCCAT 1309
Query 1341 GAGCATGGATTTCCATCCAATTAAACAGACTCTGCTTCTAGTTGGTACAAATGTAGGTGA 1400
|||||||||||||||||| ||||||||||||||||| ||||||||||| |||||||| ||
Sbjct 1310 GAGCATGGATTTCCATCCTATTAAACAGACTCTGCTACTAGTTGGTACGAATGTAGGGGA 1369
Query 1401 TATCGGGCTGTGGGAAGTTGGTTCTCGCGAAAGAT-TAGTACAGAAGACCTTCAAAGTCT 1459
||| ||||| |||||||| |||||||| ||| | | |||| |||||||| |||||||| |
Sbjct 1370 TATTGGGCTCTGGGAAGTCGGTTCTCGAGAACG-TCTAGTCCAGAAGACTTTCAAAGTTT 1428
Query 1460 GGGATTTGAGTAAATGTTCAATGCCCTTGCAGGCTGCTCTGGTGAAAGAACCTGTCGTTT 1519
|||| |||||||||||||| |||||||||||||||||| |||||||||||||||||||||
Sbjct 1429 GGGACTTGAGTAAATGTTCGATGCCCTTGCAGGCTGCTTTGGTGAAAGAACCTGTCGTTT 1488
Query 1520 CTGTCAACCGTGTGATATGGAGCCCTGACGGTTCCTTGTTTGGAGTTGCTTACTCGAGAC 1579
|||||||||||||||| |||||||| ||||||||| | || ||||||||||| |||||||
Sbjct 1489 CTGTCAACCGTGTGATTTGGAGCCCGGACGGTTCCCTATTCGGAGTTGCTTATTCGAGAC 1548
Query 1580 ATATTGTGCAACTATACTCTTATCACGGAGGTGAAGACATGAGGCAACACCTGGAGATTG 1639
||||||| || ||||||||||||||||| ||||||||||||||||||||||| |||||||
Sbjct 1549 ATATTGTACAGCTATACTCTTATCACGGTGGTGAAGACATGAGGCAACACCTTGAGATTG 1608
Query 1640 ATGCTCATGTTGGTGGTGTGAACGATATTTCCTTCTCGACTCCGAACAAGCAACTATGTG 1699
||||||||||||| ||||| || || ||| | || || ||||||||||||||||||||||
Sbjct 1609 ATGCTCATGTTGGCGGTGTCAATGACATTGCATTTTCCACTCCGAACAAGCAACTATGTG 1668
Query 1700 TAA-TAACTTGTGGTGATGACAAAACCATCAAGGTTTGGGACGCTGCAACAGGTGTCAAA 1758
| | || |||||||||||||||||||||||||||| ||||| |||||||| ||||| |||
Sbjct 1669 TTACTA-CTTGTGGTGATGACAAAACCATCAAGGTCTGGGATGCTGCAACGGGTGT-AAA 1726
Query 1759 A-GGCATACTTTTGAAGGCCATGAAGCTCCTGTTTATTCCGTTTGTCCTCATTACAAGGA 1817
| || ||||||||||||||||||||||||||||||| || | || ||||| ||||||||
Sbjct 1727 ACGGTATACTTTTGAAGGCCATGAAGCTCCTGTTTACTCTATCTGCCCTCACTACAAGGA 1786
Query 1818 AAACATTCAGTTCATATTTTCAACAGCTCTTGATGGGAAAATTAAGGCATGGTTGTATGA 1877
|||||||||||| || |||||||| |||||||| || ||||| || |||||||| |||||
Sbjct 1787 AAACATTCAGTTTATCTTTTCAACTGCTCTTGACGGAAAAATAAAAGCATGGTTATATGA 1846
Query 1878 TAATATGGGTTCCCGAGTTGACTATGATGCACCTGGTCGCTGGTGTACTACAATGGCTTA 1937
|||||||||||| || |||||||| || || ||||||||||||||||| || ||||| ||
Sbjct 1847 TAATATGGGTTCTCGGGTTGACTACGAAGCTCCTGGTCGCTGGTGTACAACGATGGCCTA 1906
Query 1938 TAGTGCCGATGGTACTAGGCTATTCTCTTGTGGGACGAGTAAAGATGGAGAGTCTTTCAT 1997
||||| ||||| ||||||||||| ||||||||||||||||||||||| || || |||||
Sbjct 1907 CAGTGCTGATGGAACTAGGCTATTTTCTTGTGGGACGAGTAAAGATGGGGAATCGTTCAT 1966
Query 1998 TGTTGAGTGGAATGAAAGCGAAGGAGCTGTTAAAAGAACTTATCAAGGATTCCACAAGCG 2057
||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||
Sbjct 1967 AGTTGAGTGGAATGAAAGCGAAGGAGCTGTGAAGAGAACTTATCAAGGATTCCACAAGCG 2026
Query 2058 TTCTCTAGGTGTTGTGCAGTTTGATACAACTAAAAACCGTTATCTAGCTGCGGGTGATGA 2117
||| || |||||||| ||||||||||| ||||||||||||||||| ||||||||||| ||
Sbjct 2027 TTCCCTTGGTGTTGTCCAGTTTGATACTACTAAAAACCGTTATCTCGCTGCGGGTGACGA 2086
Query 2118 CTTCTCCATCAAGTTCTGGGATATGGACACTGTACAGCTTTTAACTGCCATTGATGGC-G 2176
||||||||| |||||||||||||||||||| |||||||||| ||||||||||||| | |
Sbjct 2087 CTTCTCCATTAAGTTCTGGGATATGGACACCATACAGCTTTTGACTGCCATTGATG-CTG 2145
Query 2177 ATGGAGGCCTCCAGGCAAGCCCGCGTATCCGGTTTAACAAGGAAGGCTCTCTCTTGGCCG 2236
||||||| ||||||||||| || || ||| | |||||||||||||||||||||||||| |
Sbjct 2146 ATGGAGGTCTCCAGGCAAGTCCACGGATCAGATTTAACAAGGAAGGCTCTCTCTTGGCTG 2205
Query 2237 TGTCTGGAAACGAGAATGTGATCAAGATTATGGCAAACTCAGATGGTCTAAGGCTATTGC 2296
| || | ||| || ||| |||| ||| |||||||||||||||||||||||||||||||||
Sbjct 2206 TTTCCGCAAATGACAATATGATTAAGGTTATGGCAAACTCAGATGGTCTAAGGCTATTGC 2265
Query 2297 ACACTTTTGAGAACATATCATCTGAATCCTCTAAGCCTGCAATAAACAGCATT 2349
|||| | |||||| |||| ||||||||||| ||||||||||| |||||||||
Sbjct 2266 ACACAGTCGAGAACTTATCTTCTGAATCCTCCAAGCCTGCAATCAACAGCATT 2318
Score = 1286 bits (696), Expect = 0.0
Identities = 1086/1274 (85%), Gaps = 27/1274 (2%)
Strand=Plus/Plus
Query 2406 TGTAGTTTCCATCCAAGGAATGAATGGAGATTCGCGGAATATGGTGGATGTGAAGCCAGT 2465
||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2342 TGTCGTTTCCATCCCTGGAATGAATGGAGATTCGCGGAATATGGTGGATGTGAAGCCAGT 2401
Query 2466 GATTACTGAAGAATCAAATGATAAGTCTAAGATATGGAAGCTTACTGAAGTCAGCGAGCC 2525
|||||| |||||||||||||||||||||||| |||||||||||||||||||| |||| ||
Sbjct 2402 GATTACCGAAGAATCAAATGATAAGTCTAAGGTATGGAAGCTTACTGAAGTCGGCGAACC 2461
Query 2526 TTCTCAATGCAGGTCACTGAGACTCCCTGAGAATCTGAGAGTCGCCAAGATATCAAGATT 2585
||||| ||| | ||| ||||||||||||||||| |||||||| |||||||||| |||||
Sbjct 2462 CTCTCAGTGCCGTTCATTGAGACTCCCTGAGAATATGAGAGTCACCAAGATATCGAGATT 2521
Query 2586 GATTTTCACGAATTCGGGAAACGCTATTTTGGCTTTGGCATCAAACGCCATTCATCTTCT 2645
||||||||| ||||||||||| || |||||||| ||||||||||| || |||||||| ||
Sbjct 2522 GATTTTCACAAATTCGGGAAATGCAATTTTGGCATTGGCATCAAATGCTATTCATCTGCT 2581
Query 2646 ATGGAAATGGCAGCGGAATGAGCGCAACGCAACTGGAAAGGCGACAGCTTCTTTACCGCC 2705
|||||| |||||||| ||||| || || |||||||| ||||| || ||||||||||| ||
Sbjct 2582 ATGGAAGTGGCAGCGAAATGACCGTAATGCAACTGGGAAGGCAACGGCTTCTTTACCTCC 2641
Query 2706 TCAGCAGTGGCAACCAGCTAGTGGGATACT-AATGACTAACGACGTTGCTGAAACCAATA 2764
|||||||||||||||||| || ||||| || |||||| ||||| || |||||||| |||
Sbjct 2642 TCAGCAGTGGCAACCAGCGAGCGGGAT-CTTAATGACAAACGATGTGGCTGAAACTAATC 2700
Query 2765 CTACCGAGGAAGCTGTACCTTGTTTTGCTTTATCCAAGAATGATTCATATGTAATGTCAG 2824
| | || ||||| ||||| |||||||||||||| || |||||||| || || |||||||
Sbjct 2701 C-A--GAAGAAGCCGTACCCTGTTTTGCTTTATCGAAAAATGATTCCTACGTGATGTCAG 2757
Query 2825 CCTCCGGAGGAAAGATCTCCTTATTTAACATGATGACGTTTAAGACAATGGCGACTTTTA 2884
| || |||||||||||||| || ||||| ||||||||||||||||||||||| ||||| |
Sbjct 2758 CATCGGGAGGAAAGATCTCTTTGTTTAATATGATGACGTTTAAGACAATGGCTACTTTCA 2817
Query 2885 TGCCCCCACCGCCGGCTGCAACTTTTCTTGCTTTTCATCCTCAAGACAACAATATCATTG 2944
|||| || || || || ||||| |||||||||||||| |||||||| |||||||||||||
Sbjct 2818 TGCCGCCTCCTCCTGCCGCAACGTTTCTTGCTTTTCACCCTCAAGATAACAATATCATTG 2877
Query 2945 CTATCGGAATGGATGATAGCACGATTCAGATTTATAACGTCCGTGTTGATGAGGTGAAGA 3004
| ||||| |||||||| || || || |||||||| || || |||||||||||||| ||||
Sbjct 2878 CGATCGGGATGGATGACAGTACAATACAGATTTACAATGTTCGTGTTGATGAGGTTAAGA 2937
Query 3005 GTAAGCTTAAAGGTCATTCAAAGAGAATAACTGGTCTTGCCTTCTCCAACGTATTAAATG 3064
| ||||||||||| ||||| ||||||||||| || || || |||||||| |||||||| |
Sbjct 2938 GCAAGCTTAAAGGACATTCTAAGAGAATAACCGGCCTCGCTTTCTCCAATGTATTAAACG 2997
Query 3065 TGT-TGGTTTCGTCTGGAGCAGATGCACAGCTCTGTGTTTGGAACACAGATGGATGGGAA 3123
| | ||||||||||||||||||| || ||||| || || |||||||| |||||||||||
Sbjct 2998 T-TCTGGTTTCGTCTGGAGCAGACGCTCAGCTTTGCGTATGGAACACGGATGGATGGGAG 3056
Query 3124 AAGCAGAGAAGCAAGGTTTTGCCACTTCCACAGGGAAGA-CCAAACAGTGCACCTT---C 3179
||||||| |||||||||| ||| | |||||||||||||| ||| | || | ||| |
Sbjct 3057 AAGCAGAAAAGCAAGGTTCTGCAAATTCCACAGGGAAGATCCA--C-GT-CTTCTTTGTC 3112
Query 3180 AGATACGCGTGTTCAGTTCCATCAAGATCAAGCT-CACTTCCTCGTTGTGCACGAGACGC 3238
||| |||||||||||||| ||||||||||||| | |||||||| || || || || || |
Sbjct 3113 AGACACGCGTGTTCAGTTTCATCAAGATCAAG-TACACTTCCTTGTGGTCCATGAAACTC 3171
Query 3239 AGCTCGCTATATACGAAACGACCAAGCTCGAATGCATGAAACAGTGGGCTGTACGAGAAT 3298
||||||||||||||||||| |||||||| |||||||||||||||||| |||| || ||||
Sbjct 3172 AGCTCGCTATATACGAAACAACCAAGCTTGAATGCATGAAACAGTGGCCTGTGCGTGAAT 3231
Query 3299 CATTAGCTCCAATCACTCATGCCACATTCTCATGCGATAGCCAATTGGTCTACGCGAGTT 3358
|| ||||||||| || ||||||||||||||||| |||||||||||| | ||| | ||||
Sbjct 3232 CAGCAGCTCCAATAACACATGCCACATTCTCATGTGATAGCCAATTGATATACACAAGTT 3291
Query 3359 TTATGGATGCAACAGTTTGTGTATTTAGCTCTGCAAATCTAAGATTGCGTTGCCGGGTCA 3418
| ||||| || ||| | || || || ||||||||||| || ||||||||||| | ||||
Sbjct 3292 TCATGGACGCTACAATATGCGTCTTCAGCTCTGCAAACCTTCGATTGCGTTGCAGAGTCA 3351
Query 3419 A-CCCTTCTGCGTATCTACCAGCTAGTCTCAGCAATTCAAACGTACATCCACTAGTGATT 3477
| |||| |||| ||| | |||||| ||||||||| || || || |||||||| |||||
Sbjct 3352 ATCCCT-CTGCATATTTGCCAGCTTCTCTCAGCAACTCGAATGTCCATCCACTGGTGATA 3410
Query 3478 GCGGCACATCCGCAAGAA-CCAAACATGTTTGCAGTTGGTCTCTCAGACGG-GGGAGTGC 3535
||||| |||||||||||| |||| |||||||||||| ||||| |||||||| ||| || |
Sbjct 3411 GCGGCTCATCCGCAAGAATCCAA-CATGTTTGCAGTGGGTCTGTCAGACGGAGGG-GTCC 3468
Query 3536 ACATATTCGAACCGCTCGAGTCTGAAGGTAAATGGGGAGTCGCTCCACCTGC-TGAGAAC 3594
| |||||||| ||||| ||||| ||||||||||||||||| |||||||| || ||| ||
Sbjct 3469 ATATATTCGAGCCGCTTGAGTCAGAAGGTAAATGGGGAGTAGCTCCACC-GCCTGAAAAT 3527
Query 3595 GGGTCGGCTAGCGGGG-CAGCCACTGCACCTTCCGTTGGAGCCTCTGCATCTGATCAGCC 3653
|| || || |||| | || | || |||||||||||||||| ||||| ||||| |||||
Sbjct 3528 GGCTCAGCCAGCGCTGTCA-CGGCTACACCTTCCGTTGGAGCTTCTGCCTCTGACCAGCC 3586
Query 3654 TCAGAGATGATCTG 3667
||||||||||||||
Sbjct 3587 TCAGAGATGATCTG 3600
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 191838390032
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5