BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg471783 Length=870 Score E Sequences producing significant alignments: (Bits) Value AT1G15840.1 | Symbols: | unknown protein; Has 111484 Blast hit... 994 0.0 > AT1G15840.1 | Symbols: | unknown protein; Has 111484 Blast hits to 29940 proteins in 1985 species: Archae - 153; Bacteria - 40635; Metazoa - 31564; Fungi - 6444; Plants - 10232; Viruses - 1710; Other Eukaryotes - 20746 (source: NCBI BLink). | chr1:5451432-5452374 FORWARD LENGTH=923 Length=923 Score = 994 bits (538), Expect = 0.0 Identities = 731/819 (89%), Gaps = 33/819 (4%) Strand=Plus/Plus Query 80 AATCAGAAAATGATTAGTGTTTGAGCGGAGGGGATTCCATTAACAGTGGAGGAAACTGAT 139 ||||||||||||||||| |||||||| ||||||||||||| ||||||||||||| ||||| Sbjct 106 AATCAGAAAATGATTAGCGTTTGAGCAGAGGGGATTCCATGAACAGTGGAGGAATCTGAT 165 Query 140 CAAAGGTCTCTACCGACGA------GGCGGGAACATCCGGAGGAGGCAGCCAAGTTATTG 193 |||||| |||| | ||||| ||||||||||||||||||||||| ||| ||||||| Sbjct 166 CAAAGGCCTCTGCGGACGAGGTTTGGGCGGGAACATCCGGAGGAGGCAACCATGTTATTG 225 Query 194 GTGGCATAGGTGGAAACTCATCCTCCGGTGGTGGAAGAGAGAACATC-GGCGGCGTTTCT 252 ||||||||||||||||||||||| ||| |||||||||||||||| | ||||||||||| Sbjct 226 GTGGCATAGGTGGAAACTCATCCAACGGCGGTGGAAGAGAGAACA-CTGGCGGCGTTTCG 284 Query 253 TCTTGAAATGGTGGAGGTGGTAACCATAACGGCGGAGGTTGTGTCTGGCGGCGGAGGAGA 312 ||| ||||||||| || |||| ||||||||||||||||||||||||||||||||||||| Sbjct 285 TCTCCAAATGGTGGCGGAGGTAGCCATAACGGCGGAGGTTGTGTCTGGCGGCGGAGGAGA 344 Query 313 CGGCACCAAAGGGGGAGGAAACACTATGACTGGCGGTGGCGGTGAAGGGAAGAAGAAAAA 372 ||||||||||||||| ||||||||||| || ||||| ||||||||||||||||||||||| Sbjct 345 CGGCACCAAAGGGGGCGGAAACACTATCACCGGCGGGGGCGGTGAAGGGAAGAAGAAAAA 404 Query 373 tggtggcggagagggaggaggaggtgaaggaacaagcggtgaaggaggaggcggtggtgg 432 ||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||| Sbjct 405 TGGTGGCGGAGAGGGAGGAGGAGGTGAAGGAACGAGCGGTGAAGGAGGAGGTGGTGGTGG 464 Query 433 tgATGGAACCAAAGGTGGTGGAGACGGCACAAGCCGCGGTCGAGG--TGGGGACGGCCTT 490 ||||||||||||||| ||||||||||||| |||| | ||| | || ||||||||||||| Sbjct 465 TGATGGAACCAAAGGCGGTGGAGACGGCATAAGCGGTGGT-G-GGCATGGGGACGGCCTT 522 Query 491 GGACGCAGTGGTGGTGGTGGG-GATGGAACCAAGGGTGGTGGTAGACGTGGGGACGGCCT 549 ||| ||||||||||||| ||| ||||||||||| ||||| |||||||||||||| ||||| Sbjct 523 GGATGCAGTGGTGGTGG-GGGTGATGGAACCAAAGGTGGCGGTAGACGTGGGGATGGCCT 581 Query 550 TGGACGCGGTCTCGGACGTGGTGGTGGACGCGGAGGTTGGAAAGGGAGAAAAGGGTTTTC 609 ||||||||||||||||||||||||||||||||| |||||||| || |||||||||||||| Sbjct 582 TGGACGCGGTCTCGGACGTGGTGGTGGACGCGGTGGTTGGAATGGTAGAAAAGGGTTTTC 641 Query 610 CGGTGAAGGTGTTGTAGGAAAAGGCCAATGGCCACAGGTTTCGAATAAGTATTGATAGAG 669 ||| ||||| |||||||||||||||||||| |||||||| ||||| ||||||||||| || Sbjct 642 CGGCGAAGGAGTTGTAGGAAAAGGCCAATGACCACAGGTGTCGAACAAGTATTGATACAG 701 Query 670 AGGATCGCAGCTTCTCCGTCCACGATT-CTGACCGCTACCACT--T-CGTCTCCCTCTGT 725 ||||||||||||||| ||||| ||||| | ||| ||||||||| | ||||| ||||||| Sbjct 702 AGGATCGCAGCTTCTGCGTCCGCGATTAC-GACTGCTACCACTGCTGCGTCTTCCTCTGT 760 Query 726 TTGATTGCTTTTGCTCCTTTACGGTTACAGCTTCTACGTTAACGTTTG--T-C--TG-A- 778 |||||||||||||||||| |||||||| |||||||||||||||||||| | | | | Sbjct 761 TTGATTGCTTTTGCTCCTCTACGGTTAAAGCTTCTACGTTAACGTTTGACTTCACTTCAT 820 Query 779 -G----AT--GGACTCTGTTCTGTTAACGACTAAAAGGAGTAGAGACAACAAAAATCCAA 831 | || |||||||||| ||| || || ||||||||||||||||||||||| ||||| Sbjct 821 AGTCTGATATGGACTCTGTTGTGTGAATGATTAAAAGGAGTAGAGACAACAAAAGTCCAA 880 Query 832 CTACGAGTAGTTGTTTTGCTTTGATCATCTCTTTGTGTT 870 | |||||||||||||||||||| |||||||||||||||| Sbjct 881 CCACGAGTAGTTGTTTTGCTTTCATCATCTCTTTGTGTT 919 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 42447854215 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5