BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg471843
Length=1416
Score E
Sequences producing significant alignments: (Bits) Value
AT1G16460.2 | Symbols: ATRDH2, ATMST2, MST2, ST2, STR2, RDH2 | ... 1960 0.0
AT1G79230.1 | Symbols: ST1, ATMST1, MST1, ATRDH1, STR1 | mercap... 880 0.0
> AT1G16460.2 | Symbols: ATRDH2, ATMST2, MST2, ST2, STR2, RDH2
| rhodanese homologue 2 | chr1:5619641-5622624 REVERSE LENGTH=1379
Length=1379
Score = 1960 bits (1061), Expect = 0.0
Identities = 1295/1404 (92%), Gaps = 31/1404 (2%)
Strand=Plus/Plus
Query 15 ACTAGTGATCAGTGATCACCCGGTAATCACCCAGGTGGCAAAAGCAGCATCGTTGAGAAC 74
|||||||||||||||| | | |||||| | |||||||| |||||||||||||||||||
Sbjct 1 ACTAGTGATCAGTGATAATCTATTAATCATCTAGGTGGCAGAAGCAGCATCGTTGAGAAC 60
Query 75 GAAGAAGCTTGAAAAAGTTGCGAGCTCGGAGAATCTGGTGGCAGTAGCAAAATCTGGCGG 134
||||||||||||||||||||||||||| ||||||| ||| ||||||||||| ||||||
Sbjct 61 GAAGAAGCTTGAAAAAGTTGCGAGCTCAGAGAATC---TGGAAGTAGCAAAATTTGGCGG 117
Query 135 CTTTAAGTCAACAATTGTTCCACTACATGGTATTCTGA-GAAGAGAGCATTCAGGTCACA 193
|||||| ||| ||| | || | | | ||| | | ||||||||||||||| |||||
Sbjct 118 CTTTAACTCAGCAA-T-TT---GTTC-T-GTA--C--ATGAAGAGAGCATTCAGCTCACA 166
Query 194 GTTACGCTTTGCCTATTCAGCTTCTAAATCTACTCACGTTGGTCGAGTCATGGCTTCTTC 253
|||||||| ||||||| |||||||||||||||||||| ||||||||||||||||||||||
Sbjct 167 GTTACGCTCTGCCTATCCAGCTTCTAAATCTACTCACTTTGGTCGAGTCATGGCTTCTTC 226
Query 254 TGGATCTGGGGCAAAAGTTAATTACGCAACATCCTCTATATCTACCAATGAACCTGTCGT 313
|||||||| |||||||| |||||||| || || | |||||||||||||||||||| ||
Sbjct 227 TGGATCTGAGGCAAAAGCTAATTACG---CA-CC-C-ATATCTACCAATGAACCTGTTGT 280
Query 314 GTCTGTTGATTGGCTTCACTCTAATCTTAGAGATGCTGATATAAAGGTTTTGGATGCCTC 373
||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||
Sbjct 281 GTCTGTTGATTGGCTCCACTCTAATCTTGGAGATGCTGATATAAAGGTTTTGGATGCCTC 340
Query 374 ATGGTACATGCCACATGAGCAAAGAAATCCAATCCAAGAGTATCATGTTGCTCATATTCC 433
|||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 341 ATGGTACATGGCACATGAGCAAAGAAATCCAATCCAAGAGTATCAAGTTGCTCATATTCC 400
Query 434 AGGTGCTCTCTTCTTTGATGTGGATGGAATATCAGATCGAAAAACAAATTTACTACACAT 493
||||||||||||||||||| || |||||||| ||||||||||||||||||||| ||||||
Sbjct 401 AGGTGCTCTCTTCTTTGATTTGAATGGAATAGCAGATCGAAAAACAAATTTACGACACAT 460
Query 494 GCTACCATCCGAGGAAGCTTTTGCTGCTGGTTGTTCTGCTCTTGGAATCGAGAACAAAGA 553
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 461 GCTACCATCTGAGGAAGCTTTTGCTGCTGGTTGTTCTGCTCTTGGAATCGAGAACAACGA 520
Query 554 TGGAGTGGTTGTGTATGATGGAATGGGGCTCTTTAGTGCAGCTCGTGTATGGTGGATGTT 613
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 521 TGGAGTGGTTGTGTATGATGGAATGGGGCTCTTTAGTGCAGCTCGTGTATGGTGGATGTT 580
Query 614 TAGAATCTTTGGACATGACAAAGTATGGGTACTTGATGGAGGCTTGCCGAAATGGCGTGC 673
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 581 TAGAGTCTTTGGACATGACAAAGTATGGGTACTTGATGGAGGCTTGCCGAAATGGCGTGC 640
Query 674 TTCCGGCTATGATGTTGAATCCAGTGCTTCAAGTGATGCCATTTTGAAAGCCAGTGCAGC 733
||| |||||||| ||||||||||||| ||||| |||||||||||||||||||||||||||
Sbjct 641 TTCAGGCTATGACGTTGAATCCAGTGTTTCAAATGATGCCATTTTGAAAGCCAGTGCAGC 700
Query 734 AACTGAGGCTATAGAGAAAAT-TAATCAAGGACAAACAATTAGTCCAATAACTTTTCAGA 792
|||||||||||||||||| || || |||||||||||||||||| ||||||||||||||||
Sbjct 701 AACTGAGGCTATAGAGAAGATCTA-TCAAGGACAAACAATTAGCCCAATAACTTTTCAGA 759
Query 793 CGAAGTTCCGGCCACATCTTGTATTGGCACTTGATCAGGTGAAGCAAAACATCGAGGATA 852
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 760 CGAAGTTCCGGCCACATCTTGTATTGGCACTTGATCAGGTGAAGGAAAACATCGAGGATA 819
Query 853 AGACTTATCAGCACATCGATGGGCGATCAAAAGCTAGATTTGACGGTATTGCTCCAGAAC 912
||||||||||||||||||||| ||| ||||| ||||||||||||||||||||||||||||
Sbjct 820 AGACTTATCAGCACATCGATGCGCGTTCAAAGGCTAGATTTGACGGTATTGCTCCAGAAC 879
Query 913 CTCGGAAGGGAATACCGAGTGGTCATATACCCGGTAGCAAGTGTGTACCTTTTCCCCAAA 972
|| ||||||| |||||||||||||||||||||||||||||||||| |||||||||| ||
Sbjct 880 CTTGGAAGGGTTTACCGAGTGGTCATATACCCGGTAGCAAGTGTGTCCCTTTTCCCCTAA 939
Query 973 TGTTTGATTCCTCTCAAACAATGCTGCCAGCAGAGGAGCTGAAGAAGCGGTTTGAACAAG 1032
|||||||||||||||||||| || | |||||||||||||||||||||| ||||||||| |
Sbjct 940 TGTTTGATTCCTCTCAAACACTGTTACCAGCAGAGGAGCTGAAGAAGCAGTTTGAACAGG 999
Query 1033 AAGACATTTCACTGGACAGTCCGATCGTGGCCTCATGTGGAACCGGTGTAACAGCTTGTA 1092
||||||| || |||||||||||||| | ||||||||||||||||||||||||||||||||
Sbjct 1000 AAGACATATCTCTGGACAGTCCGATTGCGGCCTCATGTGGAACCGGTGTAACAGCTTGTA 1059
Query 1093 TTGTGGCATTGGGACTTTATCGTCTGGGAAAAACCGATGTGGCAATCTATGATGGGTCTT 1152
|| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 1060 TTTTGGCATTGGGACTTTATCGTCTGGGAAAAACTAATGTGGCAATCTATGATGGGTCTT 1119
Query 1153 GGACTGAATGGGCAACCGAACCAAACTTGCCCATAATGGGTTCTTCTTCATAAGAAAGTC 1212
|||||||||||||||| | |||||||||||||||| ||||||||||||||||||||||||
Sbjct 1120 GGACTGAATGGGCAACTGCACCAAACTTGCCCATAGTGGGTTCTTCTTCATAAGAAAGTC 1179
Query 1213 CAAGAAAAAGCTACAAGATCACAAGCCAGTTGATAT-TC---ATAAGGCTTAGCTTGGTT 1268
|||||||||||||||||||||||||||||| ||||| | ||||| ||||||||||||
Sbjct 1180 CAAGAAAAAGCTACAAGATCACAAGCCAGTGGATATATATTTATAAG-CTTAGCTTGGTT 1238
Query 1269 CAATCCATTTGTGTTTTAAATTTTAGCCAATTGCTGGGAGGGTTGTCTTGTTATTATTAT 1328
|||||||||| ||| ||||| |||| | |||||||||||||||||| || | ||||||
Sbjct 1239 CAATCCATTTCTGTGTTAAACTTTAACAAATTGCTGGGAGGGTTGTATT---AGTATTAT 1295
Query 1329 ACATCAGTATTCAAGATTCTTGAGTTTGGTCTCTTCTCTGTGGAGATTGATAAAAAGTCT 1388
||||||||||||| ||||||||||||||||||| ||| ||||||||||||| ||||||||
Sbjct 1296 ACATCAGTATTCAGGATTCTTGAGTTTGGTCTCATCTTTGTGGAGATTGATTAAAAGTCT 1355
Query 1389 TTATGTTCTTGTTGTCTGTTACAC 1412
| ||||||||||||| ||||||||
Sbjct 1356 TAATGTTCTTGTTGTTTGTTACAC 1379
> AT1G79230.1 | Symbols: ST1, ATMST1, MST1, ATRDH1, STR1 | mercaptopyruvate
sulfurtransferase 1 | chr1:29800693-29803939 FORWARD
LENGTH=1531
Length=1531
Score = 880 bits (476), Expect = 0.0
Identities = 808/967 (84%), Gaps = 28/967 (3%)
Strand=Plus/Plus
Query 235 GTCGAGTC-ATGGCTTCTTCTGGA-TCTGGGGCAAAAGTTAATTACGCAACATCCTCTAT 292
|||||| | ||||||||| ||||| | || | |||||| |||| | ||||| || |
Sbjct 295 GTCGAG-CTATGGCTTCTACTGGAGT-TGAGACAAAAGCCGGTTACTCCACATCATCCGT 352
Query 293 ATCTACCAATGAACCTGTCGTGTCTGTTGATTGGCTTCACT-CTAATCTTAGAGATG-CT 350
||| |||| ||||||||| || ||||||||||||||||| | ||||||||||||| | ||
Sbjct 353 ATCAACCAGTGAACCTGTTGTTTCTGTTGATTGGCTTCA-TGCTAATCTTAGAGA-GCCT 410
Query 351 GATATAAAGGTTTTGGATGCCTCATGGTACATGCCACATGAGCAAAGAAATCCAATCCAA 410
||| | ||| |||||||||| |||||||| ||||| ||||||| |||||||| ||||||
Sbjct 411 GATTTGAAGATTTTGGATGCTTCATGGTATATGCCGGATGAGCAGAGAAATCCGATCCAA 470
Query 411 GAGTATCATGTTGCTCATATTCCAGGTGCTCTCTTCTTTGATGTGGATGGAATATCAGAT 470
|| ||||| |||||||||||||| | ||||||||||||||| |||||||||||||||||
Sbjct 471 GAATATCAGGTTGCTCATATTCCCCGCGCTCTCTTCTTTGATTTGGATGGAATATCAGAT 530
Query 471 CGAAAAACAAATTTACTACACATGCT-ACCATCCGAGGAAGCTTTTGCTGCTGGTTGTTC 529
|||||||| | ||| | ||| ||| | ||| | ||||||||||||||||||||||||||
Sbjct 531 CGAAAAACTAGTTTGCCACATATGTTGCCCA-CTGAGGAAGCTTTTGCTGCTGGTTGTTC 589
Query 530 TGCTCTTGGAATCGAGAACAAAGATGGAGTGGTTGTGTATGATGGAATGGGGCTCTTTAG 589
|||||||||||| || |||||||||| ||||||||| |||||||||| |||| |||||||
Sbjct 590 TGCTCTTGGAATTGATAACAAAGATGAAGTGGTTGTCTATGATGGAAAGGGGATCTTTAG 649
Query 590 TGCAGCTCGTGTATGGTGGATGTTTAGAATCTTTGGACATGACAAAGTATGGGTACTTGA 649
|||||| ||||||||||||||||| || | ||||||||||| ||||| ||||| || ||
Sbjct 650 TGCAGCCCGTGTATGGTGGATGTTCCGAGTTTTTGGACATGAAAAAGTTTGGGTGCTCGA 709
Query 650 TGGAGG-CTTGCCGAA-ATGGCGTGCTTCCGGCTATGATGTTGAATCCAGTGCTTCAAGT 707
|||||| || || || ||||||||| || || |||||||||||||| ||||| ||| ||
Sbjct 710 TGGAGGTCTA-CC-AAGATGGCGTGCATCAGGTTATGATGTTGAATCTAGTGCATCAGGT 767
Query 708 GATGCCATTTTGAAAGCCAGTGCAGCAACTGAGGCTATAGAGAAAATTAATCAAGGACAA 767
||||| ||| ||||||||||||| |||| ||||||||||||||||||| |||||||||||
Sbjct 768 GATGCTATTCTGAAAGCCAGTGCCGCAAGTGAGGCTATAGAGAAAATTTATCAAGGACAA 827
Query 768 ACAATTAGTCCAATAACTTTTCAGACGAAGTTCCGGCCACATCTTGTATTGG-CACTTGA 826
|| | ||||| ||||| |||||||| ||||||| ||||||||| || | || |||||||
Sbjct 828 ACCGTCAGTCCGATAACCTTTCAGACTAAGTTCCAGCCACATCTAGTGT-GGACACTTGA 886
Query 827 TCAGGTGAAGCAA-AACATCGAGGATAAGACTTATCAGCACATCGATGGGCGATCAAAAG 885
|||||| ||| || || || |||||| ||||||||| ||||| || | || || ||||
Sbjct 887 TCAGGTCAAG-AACAATATGGAGGATCCGACTTATCAACACATAGACGCTCGTTCCAAAG 945
Query 886 CTAGATTTGACGGTATTGCTCCAGAACCTCGGAAGGGAATACCGA-GTGGTCATATACCC 944
| || ||||| |||| |||||||||||| || ||||||||| || | |||||||||||
Sbjct 946 CCAGGTTTGATGGTACTGCTCCAGAACCCCGTAAGGGAATAA-GAAGCGGTCATATACCT 1004
Query 945 GGTAGCAAGTGTGTACCTTTTCCCCAAATGTTTGATTCCTCTCAA-ACAATGCTGCCAGC 1003
|| ||||| ||| | |||||||| || ||||||||||| | | || ||| || | |||||
Sbjct 1005 GGAAGCAAATGTATCCCTTTTCCTCAGATGTTTGATTCTTGT-AACACATTGTTACCAGC 1063
Query 1004 AGAGGAGCTGAAGAAGCGGTTTGAACAAGAAGACATTTCACTGGACA-GTCCGATCGTGG 1062
||||||||||||||| || ||||| |||||||| || |||||||||| | || || |||
Sbjct 1064 AGAGGAGCTGAAGAAACGATTTGACCAAGAAGATATCTCACTGGACAAG-CCTATTATGG 1122
Query 1063 CCTCATGTGGAACCGGTGTAACAGCTTGTAT-TGTGGCATTGGGACTTTATCGTCTGGGA 1121
|||| ||||| || |||||||||||||| || | ||||| |||| ||| | || |||||
Sbjct 1123 CCTCGTGTGGGACTGGTGTAACAGCTTGCATCT-TGGCAATGGGGCTTCACCGGCTGGGG 1181
Query 1122 AAAACCGATGTGGCAATCTATGATGGGTCTTGGACTGAATGGGCAAC-CGAACCAAACTT 1180
|||||||| ||| | |||||||||||||| |||||||||||||| || | ||||| ||||
Sbjct 1182 AAAACCGACGTGCCGATCTATGATGGGTCGTGGACTGAATGGGCGACAC-AACCAGACTT 1240
Query 1181 GCCCATA 1187
|||||||
Sbjct 1241 GCCCATA 1247
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 69778757550
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5