BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg471865
Length=1781
Score E
Sequences producing significant alignments: (Bits) Value
AT1G16690.1 | Symbols: | Enhancer of polycomb-like transcripti... 2388 0.0
AT1G79020.1 | Symbols: | Enhancer of polycomb-like transcripti... 981 0.0
> AT1G16690.1 | Symbols: | Enhancer of polycomb-like transcription
factor protein | chr1:5705969-5709533 FORWARD LENGTH=1848
Length=1848
Score = 2388 bits (1293), Expect = 0.0
Identities = 1560/1682 (93%), Gaps = 46/1682 (3%)
Strand=Plus/Plus
Query 68 CAATTGTCCAGACTCGAG-TGAGATTTTCAATTCGCTTTCCGACATTTATAAAGCTTCTA 126
|||||||| ||||| ||| || |||||||||||| |||| ||||||||||||||||||
Sbjct 100 CAATTGTCGAGACTAGAGAGGA-ATTTTCAATTCGTTTTCGGACATTTATAAAGCTTCTC 158
Query 127 TCTTCC-TCAAGTTTCAACGTTTCTCGGAATCTGGGTAATCTCGAAAAAGAGAACTAAAC 185
|||||| | || |||||||| | | ||||||||| ||||||||||||||| | ||
Sbjct 159 TCTTCCTTGAA-TTTCAACG--T-T-----TCTGGGTAAGCTCGAAAAAGAGAAC-AGAC 208
Query 186 CCCAtttttttGATTAGCCTGTACGATTCTTCCGGAAGAGAGAACAAACCCTAGAAAATT 245
||| ||||||||||||| ||||||||| ||| | ||| | || ||||||| |
Sbjct 209 CCC-GATTTTTGATTAGCCGGTACGATTCGTCC-G--GAG-G----AA---TAGAAAACT 256
Query 246 CGCCTTACTCTACTTTCTTCCTGTCTCATTGTAGCAATTAGACGAAAGCGTTGATGAGGT 305
||||||| | |||||||||||||||||| ||| || | ||||||||||||||||
Sbjct 257 CGCCTTATTTTACTTTCTTCCTGTCTCA---TAG----GAG-C-AAAGCGTTGATGAGGT 307
Query 306 C-TTCCTACTC-AAATTGCTATATAGATATTGTTTAGTAGAGAGGAAGTAAGATTGTGAA 363
| ||| ||||| |||| |||||||||||||||||||||||||||| || ||||| |||||
Sbjct 308 CTTTCGTACTCAAAATAGCTATATAGATATTGTTTAGTAGAGAGG-AGGAAGATAGTGAA 366
Query 364 ATGAGTAGGCTATCTTTTCGACCCCGTCCATTGGACATACACAAGAAGCTTCCAATTTTA 423
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 367 ATGAGTAGGCTATCTTTTCGACCCCGTCCACTGGACATACACAAGAAGCTTCCAATTTTA 426
Query 424 AAGTCCTTTAAAGACTTTGAAGATGAAGAGAATCCTTCTTCCATTACTAGAAATTCTCAG 483
||||| ||||||||||||||||| ||||| ||||||||||||||||||||||| ||||||
Sbjct 427 AAGTCTTTTAAAGACTTTGAAGACGAAGATAATCCTTCTTCCATTACTAGAAACTCTCAG 486
Query 484 TTGCTGCGTATATCCGCCGTAGAGGTTGTTGACAATGAGGTGCAGCCTCCAGTGCCTAGT 543
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 487 TTGCTGCGTATATCTGCCGTAGAGGTTGTTGACAATGAGGTGCAGCCTCCAGTGCCTAGT 546
Query 544 AAGAAACTGGTTTCAGAAATACCAACACCTCAGTATCTTGTTGTTGATACATATGAAAGA 603
||||||||| |||| ||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 547 AAGAAACTGATTTCGGAAATCCCAACACCTCAGTATCTTGTTGTTGATACATATGAAAGA 606
Query 604 GACTACTCTAGGACTTTTAATCAGCCTGCCTCGTATTTACGCGCTAGAGGAGCTCGGGCT 663
||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||
Sbjct 607 GACTACTCTAGGACTTTTAATCAGCCTGCTTCATATTTACGCGCTAGAGGAGCTCGGGCT 666
Query 664 GAGCTTGGAGAATTTGTGGAGTATGATCTTGACAATGACGATGATGACTGGCTTTATGAG 723
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 GAGCTTGGAGAATTTGTGGAGTATGATCTTGACAATGACGATGATGACTGGCTTTATGAG 726
Query 724 TATAATAAGGAGACAATGATTCTCTCACCTGAAATGCTTGAGATCATTATATTTAAGCTC 783
||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||
Sbjct 727 TATAATAAGGAGACAATGATTCTCTCACCTGAAATGCTTGAGATCGTTATATTTAAACTA 786
Query 784 GAGGTATTGGATCATAAGGCGCGGGAAAGAGCTGGAGTTATTACTCCTACCCTTGGTTTG 843
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 787 GAGGTCTTGGATCATAAGGCGCGGGAAAGAGCTGGAGTTATTACTCCTACCCTTGGTTTG 846
Query 844 CCAGTTCCAGTGCTTTTGCAGCTTGATGCTGCTAGTGAGGCGTTGGCGTTGCAATCTTTG 903
|||||||||||||||||||||| |||||||||| ||||||| || || ||| ||||
Sbjct 847 CCAGTTCCAGTGCTTTTGCAGCCTGATGCTGCTGGTGAGGC----GC--TGAAATATTTG 900
Query 904 CCCATCAAATATGGAGTTTTCCAGGCTATATACAGTTATTGGAAAAATAAGCGTGAAAGA 963
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
Sbjct 901 TCCATCAAATATGGAGTTTTCCACGCTATATACAGTTATTGGAAAAATAAGCGTGAAATA 960
Query 964 TGGCAGAAGCCTATCTTGCGGCGTTTACAGCCTCCACCACCGGTCAATGATACCAATCCG 1023
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 961 TGGCAGAAGCCTATCTTGCGGCGTTTACAGCCTCCACCACCGGTCAATGATACCAATCCG 1020
Query 1024 TACAATGTGTTTAGGCCACGGGAGAAAGCTCATAGACTACACACAAGAAGGATGCAGCGG 1083
|||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||| |
Sbjct 1021 TACAATGTGTTTAGGCCACGGGAGAAAGCTCATAGACTACACGCAAGAAGAATGCAGCAG 1080
Query 1084 AGAGAAAACAATGCACAGTCATTTGAAAAGCTTCGACAGGTCAGGCGCAATCTTGACCAA 1143
|||||||||||||| ||||||||||| ||||| |||||||||||||||||||||||||||
Sbjct 1081 AGAGAAAACAATGCGCAGTCATTTGAGAAGCTGCGACAGGTCAGGCGCAATCTTGACCAA 1140
Query 1144 GCAAAGACCATTCTAGAAGCTCTTATTAAGAGAGAAGAGAAAAAGAGGGATTTCATGGCG 1203
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1141 GCAAAGACCATTCTAGAAGCTCTTATTAAGAGAGAAGAGAAAAAGAGGGATTTCATGGCG 1200
Query 1204 AGTGAGGTTAGCCTTCAGAGAATCCAACTCAAATATAAGAATGAAACCGAGCTTTTGGAA 1263
||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||
Sbjct 1201 AGTGAGGTTAGCCTTCAGAGAATCCAACTGAAATATAAGAATGAAACCGAACTTTTGGAA 1260
Query 1264 GATAGTTTGGCGCTGGCTGGGTTTCCACTCTCTACATCTTACAGATTTGGCTCAAGCGAA 1323
||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 1261 GATAGTTTGGCTCTGGCTGGGTTTCCACTCTCTACAGCTTACAGATTTGGCTCAAGCGAA 1320
Query 1324 GATGAATTCATGGACTCCGATGACCCTACCACCACCCAAACATGTACAAGGCCTTCCTTT 1383
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 1321 GATGAATTCATGGACTCCGATGACCCGACCACCACCCAAACATGTACAAGGCCTTCCTTT 1380
Query 1384 ACCCCTCATCCTCGTTTCACCGACTCAAATCTCGCTCGAGCTCAAGCTGGGCGCATAAAG 1443
|||||||||| |||||||||||||||||| ||||||||||||||||| ||| ||||||||
Sbjct 1381 ACCCCTCATCGTCGTTTCACCGACTCAAACCTCGCTCGAGCTCAAGCCGGGAGCATAAAG 1440
Query 1444 CAAGAGGCGAGAAGACTCGGTTGGCTCCACAAACTGAATCCTAATGAGCCAGTTATGCTG 1503
||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||
Sbjct 1441 CAAGAGGCGAGAAGACTTGGATGGCTCCACAAACTGAATCCTAATGAGCCAGTTATGCTG 1500
Query 1504 TTCACAAAACCACTGGTCCCCGATAAAATGGCTGCTGTGGGAATCATCCCTCCATCAGAT 1563
||||| ||| || |||||||||||||| ||||||||| ||||||||||||||||||||||
Sbjct 1501 TTCACGAAAGCATTGGTCCCCGATAAACTGGCTGCTGCGGGAATCATCCCTCCATCAGAT 1560
Query 1564 GCAAGAAGCGGAAGAGCTCGGTTTCAAGGAAGAATTGGTCGAGGTGGTCGGATTGTATTT 1623
|||||||| |||||||||||||||||||||||||| ||| |||| |||||||||||||||
Sbjct 1561 GCAAGAAGTGGAAGAGCTCGGTTTCAAGGAAGAATGGGTAGAGGCGGTCGGATTGTATTT 1620
Query 1624 GATAGATGGAATCCTCTAAACCAAGCCCACATGAACTGTGGGAACACTTTCTACATAGCA 1683
|||||||||||||||||||||||||||||||| |||||||| |||||| |||||||||||
Sbjct 1621 GATAGATGGAATCCTCTAAACCAAGCCCACATTAACTGTGGCAACACTCTCTACATAGCA 1680
Query 1684 CCATAACATCTCAACTAATTT-CTTCTTCTTTC-TCGTAAAAAGTTTTCCCCGTTAGTTC 1741
||||||||||||||||| ||| ||||||||| | | ||||| |||| |||||||||||||
Sbjct 1681 CCATAACATCTCAACTAGTTTTCTTCTTCTT-CATTGTAAAGAGTTATCCCCGTTAGTTC 1739
Query 1742 CT 1743
||
Sbjct 1740 CT 1741
> AT1G79020.1 | Symbols: | Enhancer of polycomb-like transcription
factor protein | chr1:29727123-29730431 REVERSE LENGTH=1893
Length=1893
Score = 981 bits (531), Expect = 0.0
Identities = 1101/1367 (81%), Gaps = 76/1367 (6%)
Strand=Plus/Plus
Query 364 ATGAGTAGGCTATCTTTTCGACCCCGTCCATTGGACATACACAAGAAGCTTCCAATTTTA 423
||||||||||| ||||| || || || ||||| ||||| || ||||||||||| ||||||
Sbjct 373 ATGAGTAGGCTCTCTTTCCGGCCACGGCCATTAGACATTCATAAGAAGCTTCCCATTTTA 432
Query 424 AAGTCCTTTAAAGACTTTGAAGATGAAGAGAATCCTTCTTCCATTACTAGAAATTCTCAG 483
|| ||||||||||||||||||||||| |||| ||| |||| | |||||||||||||||
Sbjct 433 AAATCCTTTAAAGACTTTGAAGATGATGAGACTCCAACTTCTACCACTAGAAATTCTCAG 492
Query 484 TTGCTGCGTATAT-CCGCCGTAGAGGTTGTTGACAATGAGGTGCAGCCTCCAGTGCCTAG 542
||||||||||| | | ||||||| ||||||||||||||| | |||||||||| ||
Sbjct 493 TTGCTGCGTAT-TGCTTCCGTAGA---AGTTGACAATGAGGTG--G-CTCCAGTGCCAAG 545
Query 543 TAAGAAACTGGTTTCAGAAATACCAACACCTCAGTATCTTGTTGTTGATACATATGAAAG 602
|||||||| || ||||||||||||||||||||| | | || |||| ||||||||||||||
Sbjct 546 TAAGAAACCGGCTTCAGAAATACCAACACCTCAATTTGTTATTGTGGATACATATGAAAG 605
Query 603 AGACTACTCTAGGACTTTTAATCAGCCTGCCTCGTATTTACGCGCTAGAGGAGCTCGGGC 662
|| || ||| ||||||| ||||||||| || ||| |||| || |||||||||||| |
Sbjct 606 GGATTATTCTCCGACTTTTGGTCAGCCTGCTTCTTATCTACGTGCAAGAGGAGCTCGGTC 665
Query 663 TGAGCTTGGAGAATTTGTGGAGTATGATCTTGACAATGACGATGATGACTGGCTTTATGA 722
||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||
Sbjct 666 TGAGCTTGGAGAATTTGTGGAGTATGATCTTGACAATGAGGATGAAGACTGGCTTTATGA 725
Query 723 GTATAATAAGGAGAC-AATGATTCTCTC-ACCTGAAATGCTTGAGATCATTATATTTAAG 780
|| | ||||||| | || || || || |||||||| |||||||||||| || |||||
Sbjct 726 GTTTGATAAGGATAAGAAAGAA-CT-TCCACCTGAAAAGCTTGAGATCATCATTTTTAAA 783
Query 781 CTCGAGGTATTGGATCATAAGGCGCGGGAAAGAGCTGGAGTTATTACTCCTACCCTTGGT 840
|| ||||| |||||||| ||| ||||||||||||| ||||||||||| ||||| || ||
Sbjct 784 CTAGAGGTGTTGGATCACAAGACGCGGGAAAGAGCAGGAGTTATTACACCTACTCTCGGC 843
Query 841 T-TGCCAGTTCCAGTGCTTTTGCAGCTTGATGCTGCTAGTGAGGCGTTGGCGTTGCAA-T 898
| | |||||||| |||||||||||| ||||||||||| ||| | | | | | |||| |
Sbjct 844 TCT-CCAGTTCCTGTGCTTTTGCAGTTTGATGCTGCTTCTGATG--T-G-C-T-GCAAGT 896
Query 899 -CTTTGCCCATCAAATATGGAGTTTTCCAGGCTATATACAGTTATTGGAAA-AATAAGCG 956
|| | || || || |||||| |||||||| || | || || |||||| || |||||
Sbjct 897 ACTGT-CC-ATTAATTATGGAACCTTCCAGGCGATCTTCAACTACTGGAAAGAA-AAGCG 953
Query 957 TGAAAGATGGCAGAAGCCTATCTTGCGGCGTTTACAGCCTCCACCACCGGTCAATGATAC 1016
| |||||||||||||||||||||| ||||||||||||||||| |||||||| ||||| ||
Sbjct 954 TAAAAGATGGCAGAAGCCTATCTTACGGCGTTTACAGCCTCCCCCACCGGTTAATGACAC 1013
Query 1017 CAATCCGTACAATGTGTTTAGGCCACGGGAGAAAGCTCATAGACTACACACAAGAAGGAT 1076
|||||| || ||||||||||||||| ||||||||| ||| ||||| ||||||||||||||
Sbjct 1014 CAATCCCTATAATGTGTTTAGGCCAAGGGAGAAAGTTCACAGACTCCACACAAGAAGGAT 1073
Query 1077 GCAGCGGAGAGAAAACAATGCACAGTCATTTGAAAAGCTTCGACAGGTCAGGCGCAATCT 1136
|||| ||||||||||||||| |||||||||||||||||||||||||| || ||||||||
Sbjct 1074 GCAGAGGAGAGAAAACAATGTGCAGTCATTTGAAAAGCTTCGACAGGTTAGACGCAATCT 1133
Query 1137 TGACCAAGCAAAGACCATTCTAGAAGCTCTTATTAAGAGAGAAGAGAAAAAGAGGGATTT 1196
| ||||||| ||| |||||| || ||||| ||||||||||||||||| ||||||||| |
Sbjct 1134 AGGCCAAGCACAGAGCATTCTGGAGGCTCTCATTAAGAGAGAAGAGAAGAAGAGGGATGT 1193
Query 1197 CATGG-CGAGTGAGGTTAGCCTTCAGAGAATCCAACTCAAATATAAGAATGAAACCGAGC 1255
||||| | |||||||||||||||||||||||||||||| |||| | | ||||||| ||||
Sbjct 1194 CATGGAC-AGTGAGGTTAGCCTTCAGAGAATCCAACTCCAATACAGGCATGAAACAGAGC 1252
Query 1256 TTTTGGAAGATAGTTTGGCGCTGGCTGGGTTTCCACTCTCTACATC-T--TACAGATTTG 1312
| ||||||||||| ||||| || |||| |||| || | ||||| | | |||| |||||
Sbjct 1253 TCTTGGAAGATAGCTTGGCTATGCCTGGATTTCAACCCACTACAACATCATACAAATTTG 1312
Query 1313 GCTCAAGCGAAGATGAATTCATGGACTCCGATGACC-CTACCACCACCCAAACATGTACA 1371
|||||||||| |||||| | |||||||| ||||| | | |||| || | | |||||
Sbjct 1313 GCTCAAGCGATGATGAACTGATGGACTCTGATGATCAC-ACCAGTACTCGTGTACGTACA 1371
Query 1372 AGGCCTTCCTTTACCCCTCA-TCCTCGTTTCACCGACTCAAATCTCGC-T-CGAGCTCAA 1428
|| ||| | ||| ||| | | ||||||||||| ||| |||||| | | | | ||||
Sbjct 1372 AGACCTGCGGTTATTCCT-AGTTCTCGTTTCACCAACTTAAATCT-GAATGC-ATCTCAT 1428
Query 1429 GCTGG-GCGCAT-AAAGCAAGA-G---GC-GA-GA-AG--ACT-C--GGTTGGCTCCACA 1474
| || | |||| ||| ||||| | | || || || || | || ||||| ||||
Sbjct 1429 CCCGGAG-GCATCAAA-CAAGAAGTTAGAAGACGACAGTCACAGCATGGATGGCTTCACA 1486
Query 1475 AACTGAATCCTAATGAGCCAGTTATGCTGTTCACAAAACCACTGGTCCCCGATAAAATGG 1534
|||| |||||||||| || || ||||| ||||||||||| ||||| ||||||||| |||
Sbjct 1487 GACTGGATCCTAATGAACCGGTAATGCTATTCACAAAACCGCTGGTTCCCGATAAACTGG 1546
Query 1535 CTGCTGT-GGGAATCATCCCTCCATCA--G-ATGCAAGAAGC-GG--AAG----A-GCTC 1582
| |||| |||| | ||| |||| || | || || | | || || | | ||
Sbjct 1547 CAGCTGCAGGGATTGTTCC-TCCAACACCGGATTCATCAC-CAGGTCAACCTCCAAG-TC 1603
Query 1583 GGTTTCAAGGAAGAATTGGTCGAGGTGGTCGGATTGTATTT-GATAGATGGAATCC-TCT 1640
||||||| || || ||||| || ||||| || ||| | ||| |||||||||||||| | |
Sbjct 1604 GGTTTCAGGGGAGGATTGGGCGTGGTGGCCGAATTAT-TTTCGATAGATGGAATCCGT-T 1661
Query 1641 AAACCAAGCCCACATGAACTGTGGGAACACTT-TCTACATAGCACCA 1686
| ||| | ||||| || ||||| ||| ||| | ||||| || |||
Sbjct 1662 GATGCAATCTCACATTAATTGTGGAAACTCTTAT-TACATTGCTCCA 1707
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 88101956475
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5