BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg471904 Length=1770 Score E Sequences producing significant alignments: (Bits) Value AT1G17060.1 | Symbols: CYP72C1, SOB7 | cytochrome p450 72c1 | c... 2704 0.0 > AT1G17060.1 | Symbols: CYP72C1, SOB7 | cytochrome p450 72c1 | chr1:5832097-5835456 REVERSE LENGTH=1817 Length=1817 Score = 2704 bits (1464), Expect = 0.0 Identities = 1694/1799 (94%), Gaps = 39/1799 (2%) Strand=Plus/Plus Query 1 TTTTATCACATTTCTTTTCTACAGTAtttttttttttttttCTATTCACGCATATATATA 60 |||||||||||||||||||||||||| |||| |||||||||||||||||||| Sbjct 19 TTTTATCACATTTCTTTTCTACAGTA---------TTTTCTCTATTCACGCATATATATA 69 Query 61 GATATACAGCTGCCTCCAACATATATAGTCAACTGATGAAATTATAAGCATCATCATTAT 120 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 70 GATATCCAGCTGCCTCCAACATATATAGTCAACTGATGAAATTATAAGCATCATCATTAT 129 Query 121 AGTTTTGTCTCCtttttttCTT-TTC----C-TTTACTTTCTAGCTCCTCCCTTCTTCAT 174 |||||||||||||||||||||| ||| | ||| |||||||||| ||| ||||||||| Sbjct 130 AGTTTTGTCTCCTTTTTTTCTTCTTCTTTTCTTTTTCTTTCTAGCTACTCTCTTCTTCAT 189 Query 175 AGATAGATCAAGATGATGGAGATTAATATAGTAAGAAAAGTGTTCTTGATCGGATTCTTG 234 || |||||||||||| | ||||| | || |||||||||||||||||||||||||||||| Sbjct 190 AGCTAGATCAAGATGTTAGAGATCATTACGGTAAGAAAAGTGTTCTTGATCGGATTCTTG 249 Query 235 ATCTTGATTCTGAATTGGGTATGGAGAGCTGTGAATTGGGTTTGGTTAAGGCCAAAGAGA 294 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 250 ATCTTGATACTGAATTGGGTATGGAGAGCTGTGAATTGGGTTTGGTTAAGGCCAAAGAGA 309 Query 295 CTAGAGAAATATCTGAAGAAACAAGGATTTTCTGGGAATTCTTATAGGATTTTGATGGGA 354 || |||||||||||||||||||||||||| ||||||||||||||||| ||||| |||||| Sbjct 310 CTGGAGAAATATCTGAAGAAACAAGGATTCTCTGGGAATTCTTATAGAATTTTAATGGGA 369 Query 355 GATATGAGAGAGAGTAATCAGATGGATCAAGTTGCTCACTCTCTTCCTCTTCCTCTCGAC 414 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 370 GATATGAGAGAGAGTAATCAGATGGATCAAGTTGCTCACTCTCTTCCTCTTCCTCTCGAC 429 Query 415 GCCGATTTTCTCCCTCGCATGATGCCTTTTCTCCACCACACTGTTCTAAAACATGGGAAG 474 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 430 GCCGATTTTCTCCCTCGCATGATGCCTTTTCTCCACCACACTGTTCTAAAACATGGGAAG 489 Query 475 AAGTGTTTCACATGGTACGGACCGTACCCGAACGTGATAGTAATGGATCCAGAGACACTA 534 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 490 AAGTGTTTCACATGGTACGGACCGTACCCGAACGTGATAGTAATGGATCCAGAGACACTC 549 Query 535 CGAGAGATTATGTCAAAACACGAACTCTTTCCGAAACCAAAGATTGGGTCACATAATCAT 594 |||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||| Sbjct 550 CGAGAGATTATGTCAAAACACGAACTCTTTCCAAAACCAAAGATCGGGTCACATAATCAT 609 Query 595 GTTTTTCTCAGTGGTCTTCTCAATCACGAAGGTCCTAAATGGTCCAAGCATCGAAGCATT 654 ||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 610 GTTTTCCTAAGTGGTCTTCTCAATCACGAAGGTCCTAAATGGTCCAAGCATCGAAGCATT 669 Query 655 CTTAATCCTGCTTTTCGTATCGATAATTTGAAGAGCATACTACCAGCATTCAACTCGAGT 714 |||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||| Sbjct 670 CTTAATCCTGCTTTTCGTATTGATAATTTGAAGAGCATACTACCAGCATTTAACTCGAGT 729 Query 715 TGCAAAGAGATGTTAGAAGAATGGGAGAAATTAGCTTCAGCAAAAGGAACAGTGGAACTT 774 |||||||| ||||||||||||||||||| |||||| ||||||||||||||| |||||||| Sbjct 730 TGCAAAGAAATGTTAGAAGAATGGGAGAGATTAGCCTCAGCAAAAGGAACAATGGAACTT 789 Query 775 GATTCATGGACTCACTGTCATGACTTAACCAGAAACATGCTTGCTCGTGCTTCTTTTGGT 834 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 790 GATTCATGGACTCACTGTCATGACTTAACCAGAAACATGCTTGCTCGTGCTTCTTTTGGT 849 Query 835 GATTCCTACAAAGATGGTATCAAGATCTTCGAAATCCAACAAGAGCAGATCGATCTTGGT 894 |||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||| Sbjct 850 GATTCCTACAAAGATGGTATCAAGATCTTCGAAATCCAACAAGAACAGATTGATCTTGGT 909 Query 895 CTCCTCGCTATTCG-----T----------G-C-CA---TTTTTGCCAACAAAGTTCAAC 934 ||||| |||||||| | | | || ||||||||||||||||||||| Sbjct 910 CTCCTTGCTATTCGAGCCGTCTACATTCCTGGCTCAAAGTTTTTGCCAACAAAGTTCAAC 969 Query 935 AGGAGGTTGAGAGATTC-GAAAGGGACATGAGGGCTATGTTTAAAGCTATGATTGTGACT 993 |||||||||||||| | ||||||||||||||||||||||||||||| ||||||| ||| Sbjct 970 AGGAGGTTGAGAGAAACCGAAAGGGACATGAGGGCTATGTTTAAAGCGATGATTGAGACA 1029 Query 994 AAAGAGGAGGAGATAAAAAGAGGAAGAGCTGGTCAAAATGTCACTTCTTCATTGTTTGTT 1053 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 1030 AAAGAGGAGGAGATAAAAAGAGGAAGAGCTGGTCAAAATGTGACTTCTTCATTGTTTGTT 1089 Query 1054 TGGACACTTGTTGCTCTAAGCCAACATCAAGATTGGCAAAACAAAGCAAGAGACGAGGTT 1113 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 1090 TGGACACTTGTTGCTCTAAGCCAACATCAAGATTGGCAAAACAAAGCAAGAGACGAGATT 1149 Query 1114 TCTCAGGCCTTCGGTAACAACGAGCCAGATTTCGAAGGGTTAAGCCACCTGAAAGTTGTA 1173 ||||||||||||||||||||||| || |||||||||||| |||||||||||||||| ||| Sbjct 1150 TCTCAGGCCTTCGGTAACAACGAACCCGATTTCGAAGGGCTAAGCCACCTGAAAGTCGTA 1209 Query 1174 ACAATGATCCTCCATGAAGTTCTAAGGCTCTATTCACCAGCTTACTTCACATGTCGGATA 1233 |||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||| Sbjct 1210 ACAATGATCCTCCATGAAGTTCTACGACTCTATTCACCAGCTTACTTCACATGTCGGATA 1269 Query 1234 ACTAAACAAGAAGTGAAGTTAGAGAGATTCTCTTTACCCGAAGGAGTTGTGGTCACAATA 1293 |||||||||||||||||| ||||||||||||||||||| ||||||||||| || |||||| Sbjct 1270 ACTAAACAAGAAGTGAAGCTAGAGAGATTCTCTTTACCTGAAGGAGTTGTAGTAACAATA 1329 Query 1294 CCAATGCTCTTGGTGCACCATGATCCTGACCTTTGGGGAGACGATGTGAAACAGTTTAAG 1353 |||||||||||||||||||||||| |||| ||||||||||||||||||||| |||||||| Sbjct 1330 CCAATGCTCTTGGTGCACCATGATTCTGATCTTTGGGGAGACGATGTGAAAGAGTTTAAG 1389 Query 1354 CCCGAGAGATTCGTTAATGGCGTGGCGGGTGCAACCAAAGGAAGACTCTCCTTCTTGCCA 1413 ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1390 CCCGAGAGATTCGCCAATGGCGTGGCGGGTGCAACCAAAGGAAGACTCTCCTTCTTGCCA 1449 Query 1414 TTTAGCTCGGGCCCTCGGACTTGTATCGGTCAAAACTTTTCCATGTTGCAAGCTAAACTC 1473 |||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||| Sbjct 1450 TTTAGCTCGGGCCCTCGGACTTGTATCGGTCAGAACTTTTCGATGTTGCAAGCTAAACTC 1509 Query 1474 TTCTTGGCAATGGTACTTCAAAGGTTCAGTGTAGAGCTCTCTCCATCGTATACTCATGCT 1533 |||||||||||||||||||||||||||||||| || |||||||||||||||||||||||| Sbjct 1510 TTCTTGGCAATGGTACTTCAAAGGTTCAGTGTTGAACTCTCTCCATCGTATACTCATGCT 1569 Query 1534 CCTTTCCCAGCTGCAACTACATTTCCACAACATGGAGCTCATTTGATCATCCGAAAAGTT 1593 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 1570 CCTTTCCCAGCTGCAACTACATTTCCACAACATGGAGCTCATTTGATCATCCGAAAACTG 1629 Query 1594 TAGGAGGTAGAAGAA-GAAGAAAAAA-TGTAAAGGTGCTTCCTTTCTTTTTTGTTCATCA 1651 ||||||||||||||| || ||||||| |||||||||||||||||| |||||||||||||| Sbjct 1630 TAGGAGGTAGAAGAATGAGGAAAAAAATGTAAAGGTGCTTCCTTT-TTTTTTGTTCATCA 1688 Query 1652 ACAAAACAGAACCTTGAAGGTGTCTAGTGGTAAATGCAGTTTGAATCCTGTCAAGAAATC 1711 ||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||| Sbjct 1689 ACAAAACAGAACCTTGAAGGTGTGTAGTGGTAAATGCAGTTTGAATCCGGTCAAGAAATC 1748 Query 1712 TTATTTGGGTGTTTTTGTATATAAGAAACAGATTCAAATCTATAAATTTCATAAGATTT 1770 ||||||||||||||||||||||| |||||| ||| ||||||| |||||||||||||||| Sbjct 1749 TTATTTGGGTGTTTTTGTATATATGAAACAAATTAAAATCTAGAAATTTCATAAGATTT 1807 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 87549750480 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5