BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg471905
Length=2721
Score E
Sequences producing significant alignments: (Bits) Value
AT1G17070.1 | Symbols: | GC-rich sequence DNA-binding factor-l... 4305 0.0
AT2G42330.1 | Symbols: | GC-rich sequence DNA-binding factor-l... 1293 0.0
> AT1G17070.1 | Symbols: | GC-rich sequence DNA-binding factor-like
protein with Tuftelin interacting domain | chr1:5837590-5840332
FORWARD LENGTH=2743
Length=2743
Score = 4305 bits (2331), Expect = 0.0
Identities = 2598/2728 (95%), Gaps = 14/2728 (1%)
Strand=Plus/Plus
Query 1 CTCTGATATTTTGGAAACTTTG-AGGAGTTTCGGATCTAGTTTCGTCGCCATGGACGAGT 59
||| |||| |||||||| || | | ||||||| ||||||||||| |||||||||| ||||
Sbjct 15 CTCCGATAGTTTGGAAAATTCGCA-GAGTTTCAGATCTAGTTTCTTCGCCATGGATGAGT 73
Query 60 ATCAAGAGATGGAGAGATTTAGTATGGATAATGACTACGAAGGAGGTCGATGGGAAGGTG 119
||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 74 ATCAAGATATGGAGAGATTCAGTATGGATAATGACTACGAAGGAGGTCGATGGGAAGGTG 133
Query 120 ACGAGTTCGTATACGAAAAGAGGAAGGAGAAGCGGAAGCAAACCAAAAACGACGCTACTT 179
|||||||||||||| | |||||||||||||| ||||| ||||||||||||||||||||||
Sbjct 134 ACGAGTTCGTATACCAGAAGAGGAAGGAGAAACGGAAACAAACCAAAAACGACGCTACTT 193
Query 180 ATGGAATCTTCGCTGAGAGCGATTCGGATTCCGATGATTCTGGCGGCGGCGGCAGTCGTA 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 194 ATGGAATCTTCGCTGAGAGCGATTCGGATTCCGATGATTCTGGCGGCGGCGGCAGTCGTA 253
Query 240 GGAAGAGGCGTAAGGATCGTGATTCGGGAAGGAATGCCGACTTAACCAAGCCTGTCAATT 299
|||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||
Sbjct 254 GGAAGAGGCGTAAGGATCGTGATTCGGGAAGGAAAGCAGACTTAACCAAGCCTGTCAATT 313
Query 300 TTGTATCTACAGGTACGGTTATGCCGAATCAAGAGATTGATAAGGATTCTAGAGAACATA 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 314 TTGTATCTACAGGTACGGTTATGCCGAATCAAGAGATTGATAAGGATTCTAGAGAACATA 373
Query 360 ATGATGAGAAAGATAGGGATAGAATCGAAGATAGTGATATGATTGATGACGATGTTGAAG 419
||||||||||||||||||||| ||||||||||| ||||||||||||||| ||||||||||
Sbjct 374 ATGATGAGAAAGATAGGGATAAAATCGAAGATAATGATATGATTGATGAGGATGTTGAAG 433
Query 420 TTAGAGGTGGATTGGGTATGGGAAGCTCAGGTTTAGGGTTAGGGTTTAATGCGAATGGTT 479
||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||
Sbjct 434 TTAGAGGTGGATTGGGTATTGGTAGCTCAGGTTTAGGGTTAGGGTTTAATGCGAATGGTT 493
Query 480 TTGATGATGAGGACAATCTCTTACCGGGTGCATTGGGGAAGAAGATAGCTGATGGGGCAA 539
||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||
Sbjct 494 TTGATGATGAGGACAATCTTTTACCGGGTGCATTGGGGAAGAAGATAGCTGATCGGGCAA 553
Query 540 AGATGAGAGGGAAGGCCAAA-ATGGAGAAGAGAGGTCAAGAGGGTGGTGGTGCAAAGGGA 598
||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||
Sbjct 554 AGATGAGAGGGAAGG-CAAAGGTGGAGAAGAGAGGTCAAGAGGGTGGTGGTGCAAAGGGA 612
Query 599 GGAAAGAAGAATACCTTAGG-AGGTGATATAGGTAAGTTTGAGAAATCTACTAAAGGAAT 657
|||||||||||||| ||||| | ||||||||||| |||||||||| ||||||||||||||
Sbjct 613 GGAAAGAAGAATACTTTAGGCA-GTGATATAGGTCAGTTTGAGAAGTCTACTAAAGGAAT 671
Query 658 AGGTATGAAGCTGCTTGAAAAGATGGGGTATAAGGGAGGTGGGCTTGGGAAGAATCAGCA 717
||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||
Sbjct 672 TGGTATGAAGCTGCTTGAAAAGATGGGGTACAAGGGAGGTGGGCTTGGGAAGAACCAGCA 731
Query 718 AGGTATTGTAGCTCCTATTGAAGCGCAGTTGAGGCCGAAGAATATGGGTATGGGGTATAA 777
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 732 AGGTATTGTAGCTCCTATTGAAGCGCAGTTGAGGCCGAAGAATATGGGTATGGGGTATAA 791
Query 778 TGATTTCAAGGAAGCAAAGTTGCCTGATTTAAACAAGGTTGAGGAGAAGAAGATTGTTGG 837
|||||||||||| |||||||| || |||||||| |||||||| |||||||||||| ||||
Sbjct 792 TGATTTCAAGGAGGCAAAGTTACCCGATTTAAAGAAGGTTGAAGAGAAGAAGATTATTGG 851
Query 838 GGTCAGTGTCAGTGAGAATGAACAGAGTCATGGTGATAGAGGAGGGAAAAATCTTTGGAA 897
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 852 AGTCAGTGTCAGTGAGAATGAACAGAGCCATGGTGATAGAGGAGGGAAAAATCTTTGGAA 911
Query 898 GAAGAAGAAGGTGAGGAAGGCAGTTTATGTCACTGCAGAGGAGTTGTTGGAGAAGAAGCA 957
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 912 AAAGAAGAAGGTGAGGAAGGCAGTTTATGTCACTGCAGAGGAGTTGTTGGAAAAGAAGCA 971
Query 958 GGAA-CAGGGCTTTGGTGGTGGGCAGACCATTATTGATATGCGAGGACCACAAGTTCGGG 1016
|||| | ||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 972 GGAAGC-GGGGTTTGGTGGTGGGCAGACCATTATTGATATGCGAGGACCACAAGTTCGGG 1030
Query 1017 TTGTGACAAATTTGGAAAATTTAGATGCAGAGGAGAAAGCAAAAGAAGCAGATGTTCCAA 1076
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1031 TTGTGACAAATTTGGAAAATTTAGATGCAGAGGAGAAAGCAAAAGAAGCAGATGTTCCAA 1090
Query 1077 TGCCGGAGTTACAACACAACTTACGCTTGATTGTTGATCTAGTTGAGCATGAAATTCAGA 1136
|||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||| |
Sbjct 1091 TGCCGGAGTTGCAACACAACTTGCGCTTGATTGTTGATCTAGTTGAGCATGAAATTCAAA 1150
Query 1137 AGATTGATAGGGACTTGAGGAATGAGAGAGAATCAGCCTT-ATGCTTACAGCAGGAGAAG 1195
|||||||||||||||||||||| ||||||||||||||||| | |||||||||||||||||
Sbjct 1151 AGATTGATAGGGACTTGAGGAACGAGAGAGAATCAGCCTTGA-GCTTACAGCAGGAGAAG 1209
Query 1196 GAGATGCTTATAAATGAGGAAGAGAAACAAAAAAGACACTTAGACAACATGGAATATATC 1255
||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||
Sbjct 1210 GAGATGCTTATAAATGAGGAAGAGAAACAAAAAAGACACTTGGAAAACATGGAATATATC 1269
Query 1256 GCAGATGAAATTAGTCGAATTGAGCTGGAAAATACGGCTGGGAATTTGACACTGGACTCA 1315
||||||||||| |||||||| ||||| || ||||| ||||||||||||| |||||||||
Sbjct 1270 GCAGATGAAATAAGTCGAATCGAGCTTGAGAATACATCTGGGAATTTGACGCTGGACTCA 1329
Query 1316 CTTGCGAATCGTTTTGAGGACCTTCAAACATGCTATCCTGATGATTATAAGCTTTGTAAC 1375
||||| | |||||| |||||||| |||||| ||||||||||||||||||||||||||| |
Sbjct 1330 CTTGCTATTCGTTTCGAGGACCTGCAAACAAGCTATCCTGATGATTATAAGCTTTGTAGC 1389
Query 1376 TTGTCCACCATTGCTTGCTCACTGGCCTTGCCTCTCTTTATTAGGATGTTTCAGGGTTGG 1435
||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||
Sbjct 1390 TTGTCCACCATTGCTTGCTCACTGGCCTTGCCTCTCTTTATCAGAATGTTTCAGGGTTGG 1449
Query 1436 GACCCTCTTAGGGATCCAGTGCATGGTCTCAAGGCTATATCTTCTTGGAGAAAGCTTTTG 1495
||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1450 GACCCTCTTAGTGATGCAGTGCATGGTCTCAAGGCTATATCTTCTTGGAGAAAGCTTTTG 1509
Query 1496 GAAGTCGAGGAAGATCAAAATATCTGGGTAGTTTCAACGCCTTATAGCCAACTAGTCTCG 1555
||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||
Sbjct 1510 GAAGTCGAGGAAGATCATAATATCTGGGTAGTCTCAACGCCTTATAGCCAACTAGTCTCG 1569
Query 1556 GAGGTAGTGTTACCTGCTGTTCGAATAGCAGGCATTAATACCTGGGAACCTAGAGACCCT 1615
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 1570 GAGGTAGTGTTACCTGCTGTTCGAATAGCAGGCATTAATACCTGGGAACCCAGAGACCCT 1629
Query 1616 GAGCCGATGCTTAGATTTTTAGAGACATGGGAAAATTTGCTGCCTTCATCTGTCTTGCAT 1675
|||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||
Sbjct 1630 GAGCCGATGCTTAGATTTTTAGAGACATGGGAAACTTTGCTGCCTTCATCTGTATTGCAA 1689
Query 1676 ACGATTTTGGACACAGTAGTGCTGCCAAAATTGTCAACTGCTGTTGAATATTGGGATCCA 1735
||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||
Sbjct 1690 ACGATTTTGGACACAGTAGTGCTACCAAAGTTGTCAACTGCTGTTGAATATTGGGATCCA 1749
Query 1736 CGAAGGGAACTTGTTGCCATCCATGTTTGGGTTCATCCTTGGTTGCCAATACTTGGTGAG 1795
|||||||||||||||||||||||||||||||| |||||||||||||| ||||||||| ||
Sbjct 1750 CGAAGGGAACTTGTTGCCATCCATGTTTGGGTGCATCCTTGGTTGCCTATACTTGGTCAG 1809
Query 1796 AAGTTGGAGTTTCTTTATCAGATCATTCAGATGAAATTGAGTAATGTTCTTGATGCTTGG 1855
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1810 AAGTTGGAGTTTCTTTATCAGATCATTCAGATGAAATTGAGTAATGTTCTTGATGCTTGG 1869
Query 1856 CATCCCAGTGATTCATCTGCGTACACTATTCTTTCCCCATGGAAGACCGTTTTTGATACT 1915
|||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||
Sbjct 1870 CATCCCAGTGATTCATCTGCCTACACTATTCTTTCACCATGGAAGACCGTTTTTGATACT 1929
Query 1916 TCAAGCTGGGAACAGCTTATGCGCCGTTACATAGTTCCCAAACTTCAGCTGGCTTTGCAA 1975
|||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||
Sbjct 1930 ACAAGCTGGGAACAGCTTATGCGACGTTACATAGTTCCGAAACTTCAGCTGGCTTTGCAA 1989
Query 1976 GAGTTTCAGATAAACCCGGCAAACCAGAATTTAGAACGGTTCCATTGGGTTATGAAGTGG 2035
||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 1990 GAGTTTCAGGTAAACCCGGCAAACCAGAATTTAGAACGGTTTGATTGGGTTATGAAGTGG 2049
Query 2036 GCATCTGCAGTACCCATACATATAATGGCTGATTTGATGGGGAGGTTCTTCTTCCCCAAA 2095
||||||||||||||||||||| ||||||||||| |||||| |||||||||||||||||||
Sbjct 2050 GCATCTGCAGTACCCATACATCTAATGGCTGATATGATGGAGAGGTTCTTCTTCCCCAAA 2109
Query 2096 TGGCTGGATGTGTTGTACCTTTGGTTGCGTTCTAATCCGGGGTTCGAAGAGATCCACGGA 2155
||||||||||||||||||| |||||||||| |||| || |||||||||||||||| |||
Sbjct 2110 TGGCTGGATGTGTTGTACCATTGGTTGCGTGCTAAACCAAGGTTCGAAGAGATCCAGGGA 2169
Query 2156 TGGTATT-TAGGTTGGAAAGAGTTATTCCCGCAAGAGCTTTCAGCAAATGAGAGGATCCG 2214
||||||| | |||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 2170 TGGTATTAT-GGTTGGAAAGAGTTATTCCCGCAAGAGCTTACAGCAAATGAGAGGATCCG 2228
Query 2215 AATTCAGTTAAAGCGTGGTTTAGATATGTTGATGGAAGCTGTTGAAGGAGTTGAAGTGTC 2274
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2229 AATTCAGTTAAAGCGTGGTTTAGATATGTTGATGGAAGCTGTTGAAGGAGTTGAAGTGTC 2288
Query 2275 TCAGCCACGGGCAAGGGCAAATGAGCATACACAGTTCGAGCCGGCTCAGGCTCAAGCTCA 2334
||||||| | |||| ||||||||||| |||||||| || |||||||||||||||||||||
Sbjct 2289 TCAGCCAAGAGCAAAGGCAAATGAGCGTACACAGTCCGTGCCGGCTCAGGCTCAAGCTCA 2348
Query 2335 GGCCAAGGCTCAGATGGATAGCACTGAGGTGCTGAGTTTGAAAGAAGTGTTGGAAGTATT 2394
||||||||||||||||||||||||||| ||| |||||||||||||||| |||||||||||
Sbjct 2349 GGCCAAGGCTCAGATGGATAGCACTGAAGTGTTGAGTTTGAAAGAAGTCTTGGAAGTATT 2408
Query 2395 TGCGCAAGAGAAGGAGTTGCTGTTCAAACCTAAACCGAATAGAATGCACAATGGTCTTCA 2454
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2409 TGCGCAAGAGCAGGAGTTGCTGTTCAAACCTAAACCGAATAGAATGCACAATGGTCTTCA 2468
Query 2455 GATATATGGGTTTGGGAATGTGAGTGTTATTATAGACTCAGTGAACCAGAAGCTGTTGGC 2514
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 2469 GATATATGGGTTTGGGAATGTGAGTGTCATTATAGACTCAGTGAACCAGAAGCTGTTGGC 2528
Query 2515 TCAGAAAGATGGAGATTGGTATCTTGTAACTCCTGATGACTTATTAAGGATGCACAACAA 2574
|||||||||||| | ||||| ||||||||| |||||||||||||| ||||||||||||||
Sbjct 2529 TCAGAAAGATGGCGGTTGGTTTCTTGTAACCCCTGATGACTTATTGAGGATGCACAACAA 2588
Query 2575 TACAACTGTTTCTGGAAAAAGATAGATTTCGTTTCATTTTGTATGTTTTCTGATGTATAA 2634
|||||||||||||| |||||||||| |||| |||||||||||| |||| |||||||| ||
Sbjct 2589 TACAACTGTTTCTGCAAAAAGATAG-TTTCATTTCATTTTGTAAGTTTCCTGATGTAAAA 2647
Query 2635 ACCATCTTCAATCTCATCACATTTTGTCTCTCTATCT-AAATTTCATATCTTTGACTACT 2693
||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||| ||
Sbjct 2648 ACCATCTTCAATCTCATCACATTTTGTCTCTCTGTCTTAAATTTCATATCTTTGACTTCT 2707
Query 2694 TCTTATATAGATAACAAAACTCAAATAA 2721
|||||| |||||||||||||||||||||
Sbjct 2708 TCTTATTTAGATAACAAAACTCAAATAA 2735
> AT2G42330.1 | Symbols: | GC-rich sequence DNA-binding factor-like
protein with Tuftelin interacting domain | chr2:17630729-17634299
REVERSE LENGTH=2786
Length=2786
Score = 1293 bits (700), Expect = 0.0
Identities = 1567/1964 (80%), Gaps = 145/1964 (7%)
Strand=Plus/Plus
Query 652 AGGAATAGGTATGAAGCTGCTTGAAAAGATGGGGTATAAGGGAGGTGGGCTTGGGAAGAA 711
||| || |||||||| |||||||||| ||||| ||||| ||| | |||||||| |||||
Sbjct 413 AGGGATTGGTATGAAATTGCTTGAAAAAATGGGATATAAAGGAAGAGGGCTTGGAAAGAA 472
Query 712 TCAGCAAGGTATTGTAGCTCCTATTGAAGCGCAGTTGAGGCCGAAGAATATGGGTATGGG 771
|||||| || ||||||||||||||||||| || ||||| ||||||||||||||||||||
Sbjct 473 TCAGCAGGGAATTGTAGCTCCTATTGAAGTACAATTGAGACCGAAGAATATGGGTATGGG 532
Query 772 GTATAATGATTTC-A--AG--GAA-GCA---AAGTTGCC-TGATTTAAACAAGGTTGA-G 820
|| ||||||||| | || ||| ||| ||| || || ||||||||||||||| |
Sbjct 533 TTACAATGATTTCAAGGAGAAGAATGCACCTTTGTTTCCTTG-TTTAAACAAGGTTGAGG 591
Query 821 -G-AGAAGAAGATTGTTGGGGTCAGTGTCAGTGAGAATGAACAGAGTCATGGTGATAG-A 877
| ||||||||| ||||| ||||| ||| | || || ||| |||||||||| | |
Sbjct 592 AGAAGAAGAAGAGTGTTGTGGTCACTGT---T-AG--TG---AGAATCATGGTGATGGAA 642
Query 878 GGAGGGAAAAATCTTTGGAAGAAGAAGAAGGTGAGGAAGGCAGTTTATGTCACTGCAGAG 937
|||||| |||||||||| |||||||| |||||||||| ||||||| | || || ||
Sbjct 643 GGAGGG----ATCTTTGGAAAAAGAAGAATGTGAGGAAGGAAGTTTATATTACCGCGGAA 698
Query 938 GAG-TTGTTGGAGAAGAAGCAGGAACAGGGCTTTGGTGGTGGGCAGAC-CATTATTGATA 995
||| || |||| |||||| |||||| |||| |||||| ||| ||| | ||||||||||
Sbjct 699 GAGTTTCTTGG-GAAGAAACAGGAAGAGGGTTTTGGTTGTGATCAG-CTTATTATTGATA 756
Query 996 TGCGAGGACCACAAGTTCGGGTTG-TGACAAATTTGGA-AAATTTAGATGCAGAGGAGAA 1053
|||||||||||||| ||| |||| | || | ||| || ||||||| | |||||||||||
Sbjct 757 AGCGAGGACCACAAGATCGAGTTGTTAAC-AGTTT-GAGAAATTTATACGCAGAGGAGAA 814
Query 1054 AGCAAAAGAAGC-AGATGTTCCAA-TGCCGGAGTTACAACACAACTTACGCTTGATTGTT 1111
||||| ||| || | ||||| ||| ||| |||||||| || ||||| || || ||||||
Sbjct 815 AGCAACAGATGCTA-ATGTT-CAACAGCCAGAGTTACAGCATAACTTGCGGTTTATTGTT 872
Query 1112 -GATCTAGTTGAGCATGAAATTCAGAAGATTGATAGGGACTTGAGGAATGAGAGAGAATC 1170
||| | | ||||||| |||| ||||| ||||| ||| |||||||| |||| || ||
Sbjct 873 AAATC-ACTCGAGCATGGGATTCTGAAGACTGATAAGGATTTGAGGAACGAGAAAGGATT 931
Query 1171 AGCCTT-ATGCTTACAGCAGGAGAAGGAGATGCTTATAA-AT-GAGG-AAGAGAAACA-A 1225
|||||| | |||| ||||| |||||||||| || ||| || | || || ||||||| |
Sbjct 932 AGCCTTGA-GCTTGCAGCAAGAGAAGGAGA-AATT-TAAGATGGGGGTAA-AGAAACAGA 987
Query 1226 AAAAGACACTTAGACAACATGGAATATATCGCAGATGAAATTAG-TCGAATTGAGCTGGA 1284
||| | | || |||||| ||| |||| | ||||| |||| | | |||||||||| ||||
Sbjct 988 AAACG-CTGTTTGACAACTTGGGATATGTTGCAGAGGAAA-TCGATCGAATTGAGGTGGA 1045
Query 1285 AAATACGGCTGGGAATTTGACAC-TGGACTCACTTGCGAATCGTTTTGAGGACCTT-CAA 1342
| | || |||||||||| || | |||| |||||||| |||||||| |||| ||| |
Sbjct 1046 GATTGCGTCTGGGAATTTAAC-CTTGGATTCACTTGCCAATCGTTTCAAGGA-CTTGCGT 1103
Query 1343 ACATGCTATCCTGATGATTATAAGCT-TTGTAACTTGTCCA-CCATTGCTTGCTCACTGG 1400
|| ||||||||||||| |||||| | ||||||||||| || |||||||| ||||||||
Sbjct 1104 TCAAGCTATCCTGATGACTATAAG-TGTTGTAACTTGT-CATGCATTGCTTCCTCACTGG 1161
Query 1401 CCTTGCCTCTCTTTATTAGGATGTTTCAGGGTTGGGACCCTCTTAGGGATCCAGTGCATG 1460
|||||||||||||||| ||||||||||||||||||||||||||||| ||| ||| |||||
Sbjct 1162 CCTTGCCTCTCTTTATCAGGATGTTTCAGGGTTGGGACCCTCTTAGTGATGCAGAGCATG 1221
Query 1461 GTCTCAAGGCTATATCTTCTTGGAGAAA-GCTTTTGGAAGTCGAGGA-AGATCAAAATAT 1518
|| || ||||||||||||| |||| ||| ||| ||||||| ||||| | |||||| |||
Sbjct 1222 GTATCGAGGCTATATCTTCCTGGA-AAATGCTGCTGGAAGTTGAGGACA-ATCAAAGTAT 1279
Query 1519 CTGGGTAGTTTCAACGCCTTATAGCCAACTAGTCTCGGAGGTAGTGTTACCTGCTGTTCG 1578
|| | | | ||||||||||||||| ||||| |||||| | ||||||||||| ||
Sbjct 1280 CTCG--A----C---GCCTTATAGCCAACTTGTCTCAGAGGTAATTTTACCTGCTGTGCG 1330
Query 1579 AATAGCAGGCATTAATACCTGGGAACCTAGAGACCCTGAGCCGATGCTT-AGATTTTTAG 1637
| || ||||||| ||||| |||||||||||||| |||||||| ||| || ||||| |||
Sbjct 1331 AGTATCAGGCATCAATACTTGGGAACCTAGAGATCCTGAGCCAATG-TTGAGATTGCTAG 1389
Query 1638 AGACATGGGA-AAATTTGCTGCCTTCATCTG-TCTT-GCATACGATTTTGGAC-ACAGTA 1693
|||||||||| ||| | ||| || ||| || | || | | ||||||||| || ||||||
Sbjct 1390 AGACATGGGAGAAAAT-GCTACCCTCA-CTTATTTTCGAA-ACGATTTTG-ACCACAGTA 1445
Query 1694 GTGCTGCCAAAATTGTCAA-CTGCTGTTGAATATTGGGATCCACGAAGGGAA-CTTGTTG 1751
||||||||||||||||||| | ||| |||||| |||||| ||||| |||| || |||
Sbjct 1446 GTGCTGCCAAAATTGTCAATC-GCTATTGAATCTTGGGAACCACGTTTGGAAACT-GTTC 1503
Query 1752 CCATCCA-TGTTTGGGTTCATCCTTGGTTGCCAATACTTGGTGAGAAGTTGGA--GTTTC 1808
||||||| | ||||||| ||||| ||| ||||| |||||||| |||||||||| || |
Sbjct 1504 CCATCCACT-TTTGGGTACATCCGTGGCTGCCAGTACTTGGTCAGAAGTTGGAAAGTG-C 1561
Query 1809 TTTATCAGATCATTCAGA-TGAAATT-GAGTAATGTTCTTGATGCTTGGCATCCCAGTGA 1866
| |||||||||||| || ||||||| | |||| ||||||||||||||||||| |||||
Sbjct 1562 GT-ATCAGATCATTC-GAATGAAATTCG-GTAACCTTCTTGATGCTTGGCATCCTAGTGA 1618
Query 1867 T-TCATCTG-CGTACACTATTCTTTCCCCATGGAAGACCGTTTTTGATACTTCAAGCTGG 1924
| | |||| | ||||||| |||||||| |||||||| ||||||||| || ||||||||
Sbjct 1619 TGTG-TCTGTCC-ACACTATCCTTTCCCCTTGGAAGACTGTTTTTGATGCTGCAAGCTGG 1676
Query 1925 GAACAGCTTATGCGCCGTTACATAGTTCCCAAACTT-CAGCTGGCTTTGCAAGAGTTTCA 1983
|| ||||||||||| |||||||||||||| ||| || ||| |||| ||||||||||| ||
Sbjct 1677 GAGCAGCTTATGCGTCGTTACATAGTTCCTAAA-TTACAGGTGGCCTTGCAAGAGTTCCA 1735
Query 1984 GATAAACCCGGCAAACCAGAATTTAGAACG-GTTCCATTGGGTTATGAAGTGGGCATCTG 2042
||||||||| ||| | ||||| ||||| || |||| ||| ||||||| ||||| ||||
Sbjct 1736 GATAAACCCAGCAGATCAGAACTTAGA-CGAGTTCAATTTGGTTATGGGGTGGGTATCTT 1794
Query 2043 CAGTACCCATACATATAATGGCTGATTTGATGGGGAGGTTCTTCTTCCCCAAATGGCTGG 2102
|||||||||| ||| ||||| |||||||||||| ||| ||||| |||||||| |||||||
Sbjct 1795 CAGTACCCATTCATCTAATGACTGATTTGATGGAGAGATTCTTTTTCCCCAAGTGGCTGG 1854
Query 2103 ATGTGTTGTACCTTTGGTTGCGTTCT-AATCCGGGGTTCGAAGAGATCCACGGA-TGGTA 2160
|||| || || | |||||| |||| || || |||||| ||||| | | | ||||
Sbjct 1855 ATGTTTTATATCACTGGTTGTGTTCAGAA-CCAAAGTTCGATGAGATA-ATGAAATGGTT 1912
Query 2161 TTTAGGTTGGAAAG-AGTTATTCCCGCAAGAGCTTTCAGCAAATGAG-AGGATCCGAATT 2218
||| |||||||||| | |||||| || |||||||| ||||| || |||||| ||| |
Sbjct 1913 TTTGGGTTGGAAAGGAAC-ATTCCCACAGGAGCTTTCTGCAAAC-AGGAGGATC-GAAAT 1969
Query 2219 C-AGTTAAAGCGTGGTTTAGATATGTTGATGGAAGCTGTTGAA-GGAGTTGAAGTGTCTC 2276
| |||| ||||||||| |||||||| || |||||| |||||| ||| | ||| ||||||
Sbjct 1970 CCAGTTCAAGCGTGGTCTAGATATGGCGAGGGAAGCAGTTGAACGGA-TGGAAATGTCTC 2028
Query 2277 AGCCACGGGCAAGGGCAAA--TGAGCATAC-ACA-GTT-C--GAGCCG-G-C--TC--AG 2323
||||| ||||||||| ||| | || ||| ||| | | |||| | | | || ||
Sbjct 2029 AGCCAGGGGCAAGGGAAAACATAAGT-TACCACAAGGCACAAGAGCAGAGGCAGTCTGAG 2087
Query 2324 GCTCAAGCTCAGGC-CAAGGCTCAGATGGAT-AGCACTGAGGTGCTGAGTTTGAAAGAAG 2381
| || ||| ||| || ||||||| ||||| | | | |||| ||||||||| |||||||
Sbjct 2088 GGTCGTGCTAAGGTTCA-GGCTCAGGTGGATGACC-CGGAGGAGCTGAGTTTTAAAGAAG 2145
Query 2382 T-GTTGGAAGTATTTGCGCAAGAGAAGGAGTTGCTGTTCAAACCTAAACCGAATAGAATG 2440
|| | || | |||||||| ||||||||||||||||| ||||||||||| ||||||||
Sbjct 2146 CAGTAG-AATTGTTTGCGCAGGAGAAGGAGTTGCTGTTGAAACCTAAACCTCATAGAATG 2204
Query 2441 CACAATGGTCTTCAGATATATGGGTTTGGGAATGTGAGTGTTATTA-TAGACTCAGTGAA 2499
||||| ||||||||||| ||| |||| ||||| |||||||| ||| ||||||||| ||
Sbjct 2205 CACAACGGTCTTCAGATCTATAGGTTCGGGAACGTGAGTGTG-TTACTAGACTCAGCAAA 2263
Query 2500 C-CAGAAGCTGTTGGCTCAGAAAGATGGA-GATTGGTATCTTGT 2541
| | ||| ||||||| ||| |||| ||| | ||||| || |||
Sbjct 2264 CTCT-AAGTTGTTGGCCCAGGAAGAAGGACG-TTGGTTTCCTGT 2305
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 135149744442
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5