BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg471947
Length=2898
Score E
Sequences producing significant alignments: (Bits) Value
AT1G17420.1 | Symbols: LOX3 | lipoxygenase 3 | chr1:5977411-598... 4425 0.0
AT1G72520.1 | Symbols: LOX4 | PLAT/LH2 domain-containing lipoxy... 2060 0.0
> AT1G17420.1 | Symbols: LOX3 | lipoxygenase 3 | chr1:5977411-5981480
FORWARD LENGTH=2957
Length=2957
Score = 4425 bits (2396), Expect = 0.0
Identities = 2736/2903 (94%), Gaps = 12/2903 (0%)
Strand=Plus/Plus
Query 1 AACCAGAACGTTCATCTACCAACAAATTCTCAACTCCTTAATTCTTCACTAAACAGTATA 60
||||||||||||||||||||||||||| ||||||||||| ||||||||| || ||||||
Sbjct 5 AACCAGAACGTTCATCTACCAACAAATCCTCAACTCCTT-CTTCTTCACT-AATAGTATA 62
Query 61 CCACAAAACCTCAACACTAAAAATTATTAGATTATCGTGATGGCCTTAGCTAAAGAGTTA 120
|||||||||||||| | | || |||||||||||||||||||||||||||||||||||||
Sbjct 63 CCACAAAACCTCAAAATTGTAATTTATTAGATTATCGTGATGGCCTTAGCTAAAGAGTTA 122
Query 121 ATGGGTTATCCTCTGATCACAGAAAGGTCATCACTTGTTTTGTCGGCGTCGCATTTCAAG 180
|||||||||||||| ||||||||||||||||||||||| | |||||||||||||||||||
Sbjct 123 ATGGGTTATCCTCTCATCACAGAAAGGTCATCACTTGTCTCGTCGGCGTCGCATTTCAAG 182
Query 181 AAGAGGACACAGACAACGCAATTCTCGATCAACCCTTTTGACCGCAGACCAAGAAAAACC 240
|||||||||||| |||| || ||||||||||||||||||||||| |||||||||||||||
Sbjct 183 AAGAGGACACAGTCAACACAGTTCTCGATCAACCCTTTTGACCGGAGACCAAGAAAAACC 242
Query 241 AAATCCGGCGTCGTTGCGGCCATCAGCGAAGATTTGGTCAAAACGCTGCGTTTTTCCACA 300
||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||
Sbjct 243 AAATCCGGCGTCGTTGCAGCCATCAGCGAGGATTTGGTCAAAACGCTGCGTTTTTCCACA 302
Query 301 ACAACCGGAGACAGAAAGAGCGAAGAGGAAGAGAAAGCGGCGGTGAAATTCAAGGTGAGA 360
|| |||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||
Sbjct 303 ACGACCGGAGACAGAAAGAGCGAAGAGGAGGAGAAAGCGGCGGTGAAGTTCAAGGTGAGA 362
Query 361 GCTGTGGTTACTGTGAGGAACAAGAACAAGGAGGATTTAAAAGAGACTCTTGTTAAGCAT 420
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 363 GCTGTGGTTACTGTGAGGAACAAGAACAAGGAGGATTTGAAAGAGACTCTTGTTAAGCAT 422
Query 421 TTGGATGCTTTTGCTGATAAAATTGGTCGTAACATCGTCTTGGAGCTTATTAGCACCCAA 480
||||||||||||||||||||||||||||| ||||| |||||||||||||| |||||||||
Sbjct 423 TTGGATGCTTTTGCTGATAAAATTGGTCGAAACATTGTCTTGGAGCTTATCAGCACCCAA 482
Query 481 CTTGATCCAAAAACGAGGTTGCCAAAGAAGAGTAATGCAGCGGTTTTAAAGGATTGGTCA 540
|||||||||||||||| |||||| ||||| || |||||||| ||||||||||||||||||
Sbjct 483 CTTGATCCAAAAACGAAGTTGCCGAAGAAAAGCAATGCAGCAGTTTTAAAGGATTGGTCA 542
Query 541 AAGAAATCGAAAACGAAGGCGGATAGAGTTCACTACACGGCGGAGTTCACGGTGGACGCA 600
|||||||||||||| |||||||| ||||||||||| |||||||||||||||||||| |||
Sbjct 543 AAGAAATCGAAAACTAAGGCGGAGAGAGTTCACTATACGGCGGAGTTCACGGTGGATGCA 602
Query 601 GCGTTTGGCTCGCCGGGAGCCATCACCGTTATGAATAAACACCAGAAAGAGTTTTTCTTG 660
|||||||||||||||||||| |||||||| |||||||||||||| |||||||||||||||
Sbjct 603 GCGTTTGGCTCGCCGGGAGCAATCACCGTCATGAATAAACACCAAAAAGAGTTTTTCTTG 662
Query 661 GAGAGCATAACCATCGAAGGCTTCGCACTTGGTCCTGTTCACTTTCCATGCAATTCTTGG 720
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 663 GAGAGCATAACCATTGAAGGCTTCGCACTTGGTCCTGTTCACTTTCCATGCAATTCTTGG 722
Query 721 GTTCAGTCCCAAAAAGATCACCCTGAAAAACGAATCTTCTTCACTAATCAGCCGTATTTG 780
|||||||| ||||||||||||||||| |||||||| ||||||||||||||||||||||||
Sbjct 723 GTTCAGTCTCAAAAAGATCACCCTGATAAACGAATTTTCTTCACTAATCAGCCGTATTTG 782
Query 781 CCGAATGAGACACCAGGCGGATTAAGAGTATTGAGGGAAAAAGAGTTGAAGAATCTACGA 840
||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||
Sbjct 783 CCGAATGAGACACCAAGCGGATTAAGAGTATTGAGGGAGAAAGAGTTGAAGAATCTACGA 842
Query 841 GGAGATGGGAGTGGAGTAAGAAAATTATCAGACAGAATTTACGACTTTGATGTTTACAAC 900
|||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 843 GGAGATGGAAGTGGAGTGAGAAAATTATCAGACAGAATTTACGACTTTGATGTTTACAAC 902
Query 901 GACCTTGGAAATCCCGACAAGTCTTCTGAACTCTCTCGCCCCAAACTTGGCGGCCAAGAG 960
|||||||||||||||||||| || || || ||||||||||||||||| || ||| |||||
Sbjct 903 GACCTTGGAAATCCCGACAAATCATCCGAGCTCTCTCGCCCCAAACTCGGTGGCAAAGAG 962
Query 961 ATTCCTTACCCTAGACGTTGTCGTACTGGTCGCCAAACAACAGTTTCTGATAAAGAAGCG 1020
||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||
Sbjct 963 GTTCCTTACCCTAGACGTTGTCGTACTGGTCGCCAATCAACAGTTTCTGATAAAGACGCG 1022
Query 1021 GAGAGCCGAGTAGAGAAGCCACTACCGATGTACGTGCCACGAGACGAGCAATTCGAAGAG 1080
||||||||||||||||||||| |||| ||||| |||||||||||||||||||| ||||||
Sbjct 1023 GAGAGCCGAGTAGAGAAGCCATTACCTATGTATGTGCCACGAGACGAGCAATTTGAAGAG 1082
Query 1081 TCTAAACAAGACACTTTCGCTGCAGGGAGACTAAAAGCGGTCTTGCACCACCTAATTCCG 1140
|| || || |||||||| ||||||||||| |||||||| ||||| |||||||||||||||
Sbjct 1083 TCGAAGCAGGACACTTTTGCTGCAGGGAGGCTAAAAGCAGTCTTACACCACCTAATTCCG 1142
Query 1141 TCGCTCAAAGCTAGTATTGTAGCTGAGGACTTTGCAGACTTCGGCGAAATCGATAGTCTC 1200
||||||||||| ||||||||||||||||||||||||||||||||||| |||||| ||||
Sbjct 1143 TCGCTCAAAGCCAGTATTGTAGCTGAGGACTTTGCAGACTTCGGCGAGATCGATCGTCTT 1202
Query 1201 TATAAAGAAGGCTTGTTACTCAAGTTAGGGTTTCAAGATGACATCTTTAAGAAGTTCCCT 1260
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 1203 TATAAAGAAGGCTTGTTACTCAAGTTAGGGTTTCAAGATGACATCTTTAAGAAGTTTCCT 1262
Query 1261 TTGCCTAAGGTCGTCGTTGATACCCTCCAAGAATCTACTAAAGGACTCCTCAAATACGAC 1320
| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1263 CTCCCTAAGGTCGTAGTTGATACCCTCCAAGAATCTACTAAAGGACTCCTCAAATACGAC 1322
Query 1321 AC-CCCAAAAATATTATCGAAGGATAAAAATGCATGGCTAAGAGATGACGAGTTCGCACG 1379
|| ||| ||||||||||||||||||||||| |||||| ||||||||||||| ||||||||
Sbjct 1323 ACTCCC-AAAATATTATCGAAGGATAAAAACGCATGGTTAAGAGATGACGAATTCGCACG 1381
Query 1380 TCAAGCCATAGCTGGAATCAATCCAGTGAACATTGAGAGAGTCAAGACTTATCCACCGGT 1439
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 1382 TCAAGCCATAGCTGGAATCAATCCAGTGAACATTGAGAGAGTCAAGACTTTTCCACCGGT 1441
Query 1440 CAGCAATCTTGACCCCAAGATCTACGGTCCACAACACTCAGCTCTCACTCACGACCATAT 1499
||||||||||||||||||||||||||||||||||||||| ||||| ||| ||||||||||
Sbjct 1442 CAGCAATCTTGACCCCAAGATCTACGGTCCACAACACTCCGCTCTTACTGACGACCATAT 1501
Query 1500 CATTGGTCACCTCGACGGATTCTCCGTACAACAAGCGTTGGAAGAGAATAGATTGTATAT 1559
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1502 CATTGGTCACCTCGACGGATTCTCCGTACAACAAGCGTTGGAAGAGAATAGATTGTATAT 1561
Query 1560 GTTGGATTACCATGACATATTCTTACCGTTCCTAGACCGGATCAATGCGGTAGATGGACG 1619
|||||||||||||||||||||||||||||||||||||||||| |||||| |||| |||||
Sbjct 1562 GTTGGATTACCATGACATATTCTTACCGTTCCTAGACCGGATTAATGCGCTAGACGGACG 1621
Query 1620 CAAAGCTTATGCTACTCGAACCATTTTCTTCTTGACTCGTCTCGGTACACTGAAGCCTGT 1679
|||||| |||||||||||||| || ||||||||||||||||| || ||||| ||||| ||
Sbjct 1622 CAAAGCCTATGCTACTCGAACTATCTTCTTCTTGACTCGTCTAGGCACACTTAAGCCGGT 1681
Query 1680 AGCCATTGAGCTAAGCCTCCCTCCCAATGGCCCGAAACATCGGTCCAAGCGTGTGCTTAC 1739
||||||||||||||||||||||||| |||| || ||||||||||||||||||||||||||
Sbjct 1682 AGCCATTGAGCTAAGCCTCCCTCCCCATGGTCCAAAACATCGGTCCAAGCGTGTGCTTAC 1741
Query 1740 ACCTCCAGTCGATGCAACCTCCAACTGGATGTGGCAACTCGCTAAAGCCCACGTTAGTTC 1799
||||||||||||||||||||| || ||||||||||| |||||||||||||||||||||||
Sbjct 1742 ACCTCCAGTCGATGCAACCTCTAATTGGATGTGGCAGCTCGCTAAAGCCCACGTTAGTTC 1801
Query 1800 TAACGATGCTGGTGTCCATCAACTTGTCAATCACTGGTTACGGACTCATGCATGCTTGGA 1859
||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||
Sbjct 1802 TAACGATGCTGGTGTCCATCAGCTTGTCAATCACTGGTTACGGACACATGCATGCTTGGA 1861
Query 1860 GCCTTTTATATTAGCTGCGCATAGGCAGTTGAGCGCTATGCATCCGATATTCAAGCTACT 1919
||| |||||||||||||| || ||||| ||||||||||||||||| ||||||||||||||
Sbjct 1862 GCCATTTATATTAGCTGCACACAGGCAATTGAGCGCTATGCATCCCATATTCAAGCTACT 1921
Query 1920 GGATCCGCACATGAGGTACACGTTGGAAATCAATGCATTGGCGAGACAATCGTTGATCAG 1979
|||||| |||||||| |||||||||||||||||||| ||||| |||||||||||||||||
Sbjct 1922 GGATCCACACATGAGATACACGTTGGAAATCAATGCTTTGGCTAGACAATCGTTGATCAG 1981
Query 1980 TGCAGATGGTGTGATCGAAGGAGGCTTCACTGCCGGCGCATACGGCATGGAAATGAGCGC 2039
||||||||||||||||||||||||||||||||| || |||||||||||||||||||| ||
Sbjct 1982 TGCAGATGGTGTGATCGAAGGAGGCTTCACTGCTGGTGCATACGGCATGGAAATGAGTGC 2041
Query 2040 TGCCGCATATAAAAGCAGCTGGCGGTTCGACATGGAAGGCCTCCCCGCCGATCTCATTCG 2099
|||||||| ||||||||||||||||||||||||||||||||||| |||||||| |||||
Sbjct 2042 CGCCGCATACAAAAGCAGCTGGCGGTTCGACATGGAAGGCCTCCCTGCCGATCTAATTCG 2101
Query 2100 CAGAGGAATAGCAATTCCTGATGCATCACAACCACATGGTCTTAAACTCCTAATCGAAGA 2159
||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 2102 CAGAGGAATGGCAATTCCTGATGCAACACAACCACATGGTCTTAAACTCCTAATCGAAGA 2161
Query 2160 CTATCCGTACGCCAACGACGGTCTTTTACTCTGGTCCGCCATCCAAACCTGGGTCCGCAC 2219
|||||||||||||||||||||||||||||||||||| || ||||||||||||||||| ||
Sbjct 2162 CTATCCGTACGCCAACGACGGTCTTTTACTCTGGTCAGCAATCCAAACCTGGGTCCGAAC 2221
Query 2220 CTACGTGGAACGCTACTACT-CAAACCCGAGCCTAATCAAAACAGACTCTGAGCTCCAAA 2278
||| || ||||||||||| | ||||||||| ||| |||||||||||||||||||||| ||
Sbjct 2222 CTATGTTGAACGCTACTA-TCCAAACCCGAACCTTATCAAAACAGACTCTGAGCTCC-AA 2279
Query 2279 AC-TGGTACTCCGAATCAATCAACGTCGGCCACGCCGACCTCCGCGACGCTGATTGGTGG 2337
| |||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 2280 TCTTGGTACTCAGAATCAATCAACGTCGGCCACGCTGACCTCCGCGACGCTGATTGGTGG 2339
Query 2338 CCGGAGTTATCAACCGTCGACGACCTTGTGTCGATTCTCACCACCT-TAATCTGGCTAGC 2396
|||||||||||||||||||||||||| ||||||||||| |||| || |||||||||| ||
Sbjct 2340 CCGGAGTTATCAACCGTCGACGACCTCGTGTCGATTCTAACCA-CTCTAATCTGGCTCGC 2398
Query 2397 CTCAGCACAACACGCCGCTTTAAACTTCGGACAATACCCGTACGGCGGCTACGTCCCAAA 2456
||| || |||||||||||| ||||||| ||||||||||| ||||| ||||||||||||||
Sbjct 2399 CTCTGCTCAACACGCCGCTCTAAACTTTGGACAATACCCTTACGGTGGCTACGTCCCAAA 2458
Query 2457 CCGACCTCCGTTGATGCGACGGTTAATCCCGGACGAGTCGGATCCAGAGTATGCGAGCTT 2516
|||||| ||||||||||| ||||||||||| |||||||||||||||||||| ||||| ||
Sbjct 2459 CCGACCACCGTTGATGCGGCGGTTAATCCCCGACGAGTCGGATCCAGAGTACGCGAG-TT 2517
Query 2517 T-ATCTCTAATCCGGAGAAGTATTACTTCTCGTCGATGCCGAGTTTGGCGCAGACTTCGA 2575
| ||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 2518 TCATCTCCCATCCGGAGAAGTATTACTTCTCGTCGATGCCAAGTTTGGCGCAGACTTCGA 2577
Query 2576 AGTTTATGGCTGTGGTTGATACTTTGTCGACGCATTCGCCGGATGAGGAGTATATTGGGG 2635
|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 2578 AGTTTATGGCCGTGGTTGATACTTTGTCGACGCATTCGCCGGATGAGGAGTATATTGGAG 2637
Query 2636 AGAGACAACAGCCGTCGATTTGGACTGGAGATGCAGAGATCGTTGATGCGTTTTATGGAT 2695
||||||||||||||||||||||||| |||||||| ||||| ||||| |||||||||||||
Sbjct 2638 AGAGACAACAGCCGTCGATTTGGACAGGAGATGCGGAGATTGTTGAAGCGTTTTATGGAT 2697
Query 2696 TTGCGACGGAGATCGGACGGATAGAGAAAGAGATTGAGAAAAGGAACGCTGATCCTGACC 2755
||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2698 TTGCGGCAGAGATCGGACGGATAGAGAAAGAGATTGAGAAAAGGAACGCTGATCCTGACC 2757
Query 2756 GTAGAAATAGGTGTGGGGCTGGTGTTTTGCCTTATGAGTTGTTGGTTCCGAGTTCTGAGC 2815
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2758 GTAGAAATAGGTGTGGGGCTGGTGTTTTGCCTTATGAGTTGTTGGTTCCGAGTTCTGAGC 2817
Query 2816 CTGGTGTTACGTGTAGAGGTGTACCTAATAGTGTATCTATATAATTACGAACGAAATTAT 2875
||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||
Sbjct 2818 CTGGTGTTACGTGTAGAGGTGTACCTAATAGTGTATCTATATAATTAAGAAGGAAATTAT 2877
Query 2876 TTATGGGAAGTAAATGTAAAAAA 2898
|||| |||||||||||| ||||
Sbjct 2878 TTATAAGAAGTAAATGTAGAAAA 2900
> AT1G72520.1 | Symbols: LOX4 | PLAT/LH2 domain-containing lipoxygenase
family protein | chr1:27308515-27312754 FORWARD LENGTH=3042
Length=3042
Score = 2060 bits (1115), Expect = 0.0
Identities = 2220/2743 (81%), Gaps = 117/2743 (4%)
Strand=Plus/Plus
Query 176 TCAAGAAGAGGACACAGACAACGCAATTCTCGATCAACCCTTTTGA-CCGCAGACC-AAG 233
||||||||| |||||||| ||| || ||||| |||||||||||||| ||| ||||| | |
Sbjct 185 TCAAGAAGAAGACACAGAGAACACAGTTCTCCATCAACCCTTTTGATCCG-AGACCTATG 243
Query 234 AAAAACC---AAATC---CGGCGTCGTTGCGGCCATCAGCGAAGATTTGGTCAAAACGCT 287
| | || || || |||||| || |||||||||||||| |||||||| ||||||||
Sbjct 244 -AGAGCCGTTAACTCAAGCGGCGTTGTAGCGGCCATCAGCGAGGATTTGGTTAAAACGCT 302
Query 288 GCGTTTTTCCA-CAACAACCGG-AGACAGAA-AGAGCGAA-GAGGAAG-AGA-AAG-CGG 340
||| | || | | || ||| ||| | || | || ||| ||||||| ||| || |
Sbjct 303 GCG-TATT--AGC-ACTGTCGGTAGA-A-AACA-AGAGAAGGAGGAAGAAGAGGAGAAGT 355
Query 341 CGGTGAAATTCAAGGTGAGAGCTGTGGTTACTGTGAGGAACAAGAACAAGGAGGATTTAA 400
||||||| || ||||||||||| || | || ||||||||||| ||||| |||||||| |
Sbjct 356 CGGTGAAGTTTAAGGTGAGAGCAGTTGCGACGGTGAGGAACAAAAACAAAGAGGATTTTA 415
Query 401 AAGAGACTCTT-GTTAAGCATTTGGATGCTTTTGCTGATAAAATTGGTCGTAACATCGTC 459
|||| ||| || ||||||||||||||||||||| |||||||||||||| | ||| | |||
Sbjct 416 AAGAAACT-TTGGTTAAGCATTTGGATGCTTTTACTGATAAAATTGGTAGAAACGTTGTC 474
Query 460 TTGGAGCTTATTAGCACCCAACTTGATCCAAAAACG-AGGTTGCCAAAGAAGAGTAATGC 518
||||||||||| || |||||| |||||||||||||| | | ||||||||||||||| ||
Sbjct 475 TTGGAGCTTATGAGTACCCAAGTTGATCCAAAAACGAATG-AGCCAAAGAAGAGTAAAGC 533
Query 519 AGCGGTTTT-AAAGGATTGGTCAAAGAAATCGAAA-ACGAAGGCGGATAGAGTTCACTAC 576
|| ||||| ||| ||||||||||||||||| ||| | |||||||| ||||| || |||
Sbjct 534 GGCAGTTTTGAAA-GATTGGTCAAAGAAATC-AAATTCAAAGGCGGAAAGAGTCCATTAC 591
Query 577 ACGGCGGAGTTCACGGTGGACGCAGCGTTTGGCTCGCCGGGAGCCATCACCGTTATGAAT 636
||||| |||||||||||||| |||| ||||| || ||||||||||||||||| | ||
Sbjct 592 ACGGCCGAGTTCACGGTGGATTCAGCCTTTGGTTCTCCGGGAGCCATCACCGTGACCAAC 651
Query 637 AAACACCAGAAAGAGTT-TTTCTTGGAGAGCATAACCATCGAAGGCTTCGCACT-TGGTC 694
|||||||| |||||||| |||||| |||||||| |||||||| || |||||| | ||| |
Sbjct 652 AAACACCAAAAAGAGTTCTTTCTT-GAGAGCATCACCATCGAGGGTTTCGCA-TGTGGCC 709
Query 695 CTGTTCACTTTCCATGCAATTCTTGGGTTCAGTCCCAAAAAGATCA-CCCTGAAAAACGA 753
|||||||||| || ||||| |||||||| || || |||||||| || || | ||||||
Sbjct 710 CTGTTCACTTCCCCTGCAACTCTTGGGTCCAATCTCAAAAAGACCATCCAT-CCAAACGA 768
Query 754 A-TCTTCTTCACTAATCAGCCGTATTTGCCGAATGAGACACCAG-GCGGAT-TAAGAGTA 810
| || |||||||||||||||| || ||||||| |||||||| | ||| | ||||| |
Sbjct 769 ATTC-TCTTCACTAATCAGCCTTACTTGCCGAGCGAGACACC-GTCCGG-TCTAAGAACA 825
Query 811 TTGAGGGAAAAAGAGTTGAAGAATCTACGAGGAGATGGGAGTGGAGTAAGAAAATTATCA 870
|| ||||| ||||| ||| |||||||| ||||| |||| | |||| |||||||||||||
Sbjct 826 TTAAGGGAGAAAGAATTGGAGAATCTAAGAGGAAATGGTAAAGGAGAAAGAAAATTATCA 885
Query 871 GACAGAATTTACGACTT-TGATGTTTACAACGACCTTGGAAATCCCGACA-AGTCTTC-T 927
|||||||| ||||| || |||||| ||||||||| | |||||||| |||| | || | |
Sbjct 886 GACAGAATCTACGA-TTATGATGTGTACAACGACATAGGAAATCCGGACATA-TC-ACGT 942
Query 928 GAACTCTCTCGCCCCAAACTTGGCGGCCAAGAGA-TTCCTTACCCTAGACGTTGTCGTAC 986
||||| | || |||| |||||| |||| || | |||||||||||||||| ||||| ||
Sbjct 943 GAACTAGCCCGTCCCACACTTGGTGGCCGTGA-ATTTCCTTACCCTAGACGCTGTCGAAC 1001
Query 987 TGGTC-GCCAAACAACAGTTTCTGATAAAGAAG-CGGAGAGCCGAGTAGAGAAGCCACTA 1044
|| | | | |||| | | ||| | || | | ||||| || || ||||| ||| ||
Sbjct 1002 CGGCCGGTC-TTCAACCGACACCGAT-ATGATGTCTGAGAGGCGGGTGGAGAAACCATTA 1059
Query 1045 CCGATGTACGTGCCACGAGACGAGCAATTCGAAGAGTCTAAACAAG-ACACTTTCGCTGC 1103
|||||||| |||||| |||| ||||| ||||| |||||||| | || ||||||| |||||
Sbjct 1060 CCGATGTATGTGCCAAGAGATGAGCAGTTCGAGGAGTCTAAGC-AGAACACTTTTGCTGC 1118
Query 1104 AGGGAGACTAAAAGCGGTCTTGCACCACCTAATTCCGTCGCTCAAAGCTAGTATTGTAGC 1163
| | ||||| || ||||| || || |||| || || || || |||||||| ||| | ||
Sbjct 1119 ATGTAGACTTAAGGCGGTTTTACATAACCTTATACCTTCACTAAAAGCTAGCATTTTGGC 1178
Query 1164 TGAGGACTTTGC-AGACTTCGGCGAAATCGATAGTCTCTATAAAGAAGGCTTG-TTACTC 1221
||||||||| || | |||| || || ||||||||||| || |||||||||||| || |||
Sbjct 1179 TGAGGACTTCGCTA-ACTTTGGTGAGATCGATAGTCTTTACAAAGAAGGCTTGCTT-CTC 1236
Query 1222 AAGTTAGGGTTTCAAGATGACATCTTTAAGAAGTTCCCTTTGCCTAAGGTCGTCGTTGA- 1280
|||||||||||||||||||| || || ||||| |||||||| || ||| ||||| |
Sbjct 1237 AAGTTAGGGTTTCAAGATGATATGTTCAAGAAATTCCCTTTACCGAAGATCGTC----AC 1292
Query 1281 TACCCTCCAAGAATCTACTAAAGGAC-TCCTCAAATACGACACCCCAAAAATA-TTATCG 1338
|||||||||| |||| | ||| | | || | ||||||||| || |||||| || ||
Sbjct 1293 TACCCTCCAAAAATC-AAGCGAGGGCTTGCTTAGATACGACACTCCTAAAATAGTT-TCA 1350
Query 1339 AAGGATAAAAATGCATGGCTAAGAGATGACGAGTTCGCACGTCAAGCCATAGCTGGAATC 1398
||||||||| |||||||||| ||||||||||||||||||| |||||||||||||| |||
Sbjct 1351 AAGGATAAATATGCATGGCTTCGAGATGACGAGTTCGCACGCCAAGCCATAGCTGGGATC 1410
Query 1399 AATCCAGTGAACATTGAGA-GAGTCAAGACTTATCCACCGGTCAGCAATCTTGACCCC-A 1456
|| || || ||||| || | |||||| | |||||||||||||||||||||||||||| |
Sbjct 1411 AACCCGGTCAACATAGA-ACGAGTCACGTCTTATCCACCGGTCAGCAATCTTGACCCTGA 1469
Query 1457 AGATCTACGGTCCA---CAACACTCAGCTCTCACTCACGACCATATCATTGGTCACCTCG 1513
| |||||||| ||| | ||||| |||||||| | ||||| ||||| ||||| || |
Sbjct 1470 A-ATCTACGGACCAGGTCTTCACTCCGCTCTCACGGAAGACCACATCATCGGTCAACTTG 1528
Query 1514 ACGGATTCTCCGTACAACAAGCGTTGGAAGA-GAATAGATTGTATATGTTGGATTACCAT 1572
| || || |||||||||||||||| || || ||| | |||| |||| |||| ||||||
Sbjct 1529 ATGGCTTAACCGTACAACAAGCGTTAGA-GACGAACCGTTTGTTTATGGTGGACTACCAT 1587
Query 1573 GACATATTCTTACCGTTCCTAGACCGGATCAATGCGGTAGATGGACGCAAAGCTTATGCT 1632
||||||| ||||||||| ||||| | ||||| ||| | ||||||||||| ||||| ||
Sbjct 1588 GACATATACTTACCGTTTCTAGATAGAATCAACGCGCTTGATGGACGCAAGGCTTACGCG 1647
Query 1633 ACTCGAACCATTTTCTTCTTGACTCGTCTCGGTACACTGAAGCCTGTAGCCATTGAGCTA 1692
||||||||||| || |||||||| || ||||||||||| |||||| | ||||| ||||||
Sbjct 1648 ACTCGAACCATATTGTTCTTGACCCGACTCGGTACACTCAAGCCTATCGCCATCGAGCTA 1707
Query 1693 AGCCTCCCTCC-CAATG--GCCCGAAAC-ATCGGTCCAAGCGTGTGCTTACACCTCCAGT 1748
||||||||| | |||| || | |||| | ||||||||| ||| | |||||||||||
Sbjct 1708 AGCCTCCCTTCTCAATCAAGCTC-AAACCAAAAGTCCAAGCGCGTGGTCACACCTCCAGT 1766
Query 1749 CGATGCAACCTCCAACTGGATGTGGCAACTCGCTAAAGCCCACGTTAGTTCTAACGATGC 1808
|| ||||||||||||||||||||||| || || || ||||||||| | || || || ||
Sbjct 1767 AGACGCAACCTCCAACTGGATGTGGCAGCTAGCCAAGGCCCACGTTGGGTCCAATGACGC 1826
Query 1809 TGGTGTCCATCAACTTGTCAATCACTGGTTACGGACTCATGCATGCTTGGAGCCTTTTAT 1868
||||||||| || ||||| ||||| |||||||| |||||||| || ||||| || |||||
Sbjct 1827 TGGTGTCCACCAGCTTGTGAATCATTGGTTACGTACTCATGCGTGTTTGGAACCGTTTAT 1886
Query 1869 ATTAGCTGCGCATAGGCAGTTGAGCGCTATGCATCCGATATTCAAGCTACTGGATCCGCA 1928
||||||||| ||||| || || ||||| ||||||||||||||||| || | || || ||
Sbjct 1887 ATTAGCTGCTCATAGACAATTAAGCGCAATGCATCCGATATTCAAATTATTAGACCCTCA 1946
Query 1929 CATGAGGTACACGTTGGAAATCAATGCATTGGCGA-GACA-ATCGTTGATCAGTGCAGAT 1986
|||||||||||| ||||| |||||||| |||| | |||| | | ||||| ||||| ||
Sbjct 1947 CATGAGGTACACTTTGGAGATCAATGCCGTGGC-ACGACAGA-CTTTGATTAGTGCGGAC 2004
Query 1987 GGTGTGATCGAAGGAG-GCTTCACTGCCGGCGCA-TACGG-CATGGAAATGAGCGCTGCC 2043
||||||||||| | | |||||||||| || || ||||| | | || || || | ||
Sbjct 2005 GGTGTGATCGA-GTCGTGCTTCACTGCTGGT-CAATACGGTC-TAGAGATTAGTTCCGCT 2061
Query 2044 GCATATAA-AAGCAGCTGGCGGTTCGACATGGAAGGCCTCCCCGCCGATCTCATTCGCAG 2102
|| ||||| || || |||||||| || |||||||| ||||| || |||||||| || ||
Sbjct 2062 GCGTATAAGAA-CAAATGGCGGTTTGATATGGAAGGTCTCCCTGCTGATCTCATCCGAAG 2120
Query 2103 AGGAATAGCAATTCCTGATGCATCACAACCACATGGTCTTAAACTCCTAATCGAAGACTA 2162
|| || || |||| || || ||||||||||||| |||||| | || | ||||||||
Sbjct 2121 GGGGATGGCTGTTCCAGACCCAACACAACCACATGGGCTTAAATTACTTGTTGAAGACTA 2180
Query 2163 TCCGTACGCCAACGACGGTCTTTTACTCTGGTCCGCCATCCAAACCTGGGTCCGCACCTA 2222
|| ||||||||||||||||| ||| | |||||||| |||||||| |||||||| |||||
Sbjct 2181 CCCATACGCCAACGACGGTCTCTTATTATGGTCCGCAATCCAAACTTGGGTCCGAACCTA 2240
Query 2223 CGTGGAACGCTACTACTCAAACCCGAGCCTAATCAAAACAGACT-CTGAGCTCCAAAACT 2281
||||||||| || ||| ||||| ||| ||||||| |||| || | ||||||||||| ||
Sbjct 2241 CGTGGAACGTTATTACGCAAACTCGAACCTAATCCAAACCGA-TACTGAGCTCCAAGCCT 2299
Query 2282 GGTACTCCGAATCAATCAACGTCGGCCACGCCGACCTCCGCGACGCTGATTGGTGGCCGG 2341
||||||| || ||||||||||| || ||||| || | ||||||||| || |||||||||
Sbjct 2300 GGTACTCTGAGTCAATCAACGTAGGTCACGCTGATCACCGCGACGCCGAGTGGTGGCCGA 2359
Query 2342 AG-TTATCAACCGTCGACGACCTTGTGTC-GATTC-TCACCACCTTAATCTGGCTAGCCT 2398
|| || || |||||||| || || || || | | | |||||||| | |||||||| ||||
Sbjct 2360 AGCTT-TCCACCGTCGAAGATCTCGTCTCCG-T-CATCACCACCATCATCTGGCTCGCCT 2416
Query 2399 CAGCACAACACGCCGCTTTAAACTTCGGACAATACCCGTACGGCGGCTACGTCCCAAACC 2458
| ||||||||||| || | |||||||||||||| || ||||| ||||||||||| ||||
Sbjct 2417 CGGCACAACACGCGGCACTCAACTTCGGACAATATCCTTACGGTGGCTACGTCCCGAACC 2476
Query 2459 GACCTCCGTTGATGCGACGGTTAAT-CCCGGACGAGTCGGATCCAGAGTATG-CGAGCTT 2516
|||| ||| | ||||| ||||| || |||| ||||||| ||||| |||| | |||| ||
Sbjct 2477 GACCACCGCTAATGCGGCGGTTGATTCCCG-ACGAGTCAGATCCCGAGT-TCACGAGTTT 2534
Query 2517 TATCTCTA-ATCCGGAGAAGTATTACTTCTCGTCGATGCCGAGTTTGGCGCAGACTTCGA 2575
|||| | |||| | ||||||| |||||||||||||||||||| ||| || |||
Sbjct 2535 TATCGA-AGATCCTCAAAAGTATTTTTTCTCGTCGATGCCGAGTTTATTGCAAACGACGA 2593
Query 2576 AGTTTATGGCTGTGGTTGATACTTTGTCGACGCATTCGCCGGATGAGGAGTATATTGGGG 2635
|||||||||| ||||||||||| |||||||| ||||||||||||||||||||||| || |
Sbjct 2594 AGTTTATGGCGGTGGTTGATACATTGTCGACACATTCGCCGGATGAGGAGTATATCGGAG 2653
Query 2636 AGAGACAACAGCCGTCGATTTGGACTGGAGATGCAGAGATCGTTGATGCGTTTTATGGAT 2695
|||||||||| |||||||| |||||||||||||| |||||||| ||||||||||||||||
Sbjct 2654 AGAGACAACAACCGTCGATATGGACTGGAGATGCTGAGATCGTAGATGCGTTTTATGGAT 2713
Query 2696 T-TGCGACGGAGATCGGACGGATAGAGAAAGAGATTGAGAAAAGGAA-CGCTGATCCT-G 2752
| | || |||| ||||||||||||||||| |||||||| || ||||| || ||||||| |
Sbjct 2714 TCT-CGGCGGAAATCGGACGGATAGAGAAGGAGATTGACAAGAGGAATCG-TGATCCTAG 2771
Query 2753 ACCGTAGAAATAGGTGTGGGGCTGGTGTTTTGCCTTATGAGTTGTTGGTTCCGAGTTCTG 2812
|||||| ||| | ||||| || || || || || ||||||||| ||| |||||||||||
Sbjct 2772 -CCGTAGGAATCGCTGTGGCGCGGGAGTGTTACCGTATGAGTTGATGGCTCCGAGTTCTG 2830
Query 2813 AGCCTGGTGTTACGTGTAGAGGTGTACCTAATAGTGTATCTAT 2855
| || ||||||||||||||||| || |||||||||||||||||
Sbjct 2831 AACCGGGTGTTACGTGTAGAGGAGTGCCTAATAGTGTATCTAT 2873
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 144029293353
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5