BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg471954
Length=1335
Score E
Sequences producing significant alignments: (Bits) Value
AT1G17470.1 | Symbols: ATDRG1, ATDRG, DRG1 | developmentally re... 2302 0.0
AT1G72660.1 | Symbols: | P-loop containing nucleoside triphosp... 1561 0.0
> AT1G17470.1 | Symbols: ATDRG1, ATDRG, DRG1 | developmentally
regulated G-protein 1 | chr1:6002912-6006405 FORWARD LENGTH=1573
Length=1573
Score = 2302 bits (1246), Expect = 0.0
Identities = 1306/1335 (98%), Gaps = 4/1335 (0%)
Strand=Plus/Plus
Query 1 ATAGTAGCAAGAACAAGTGAAGCACAATGGGGATCATCGAAAGGATTAAGGAAATCGAGG 60
|||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 98 ATAGTAGCAAAAACAAGTGAAGCACAATGGGGATCATCGAAAGGATTAAAGAAATCGAGG 157
Query 61 CCGAGATGGCTCGGACTCAGAAGAATAAAGCTACAGAGTATCATCTTGGTCAGCTCAAGG 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 158 CCGAGATGGCTCGGACTCAGAAGAATAAAGCTACAGAGTATCATCTTGGTCAGCTCAAGG 217
Query 121 CAAAGATTGCAAAGCTCAGGACACAACTGTTGGAGCCTCCAAAAGGTGCTAGTGGAGGCG 180
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 218 CAAAGATTGCAAAACTCAGGACACAACTGTTGGAGCCTCCAAAAGGTGCTAGTGGAGGCG 277
Query 181 GGGAAGGTTTTGAAGTTACCAAGTATGGTCATGGACGTGTTGCACTTATAGGATTTCCAA 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 278 GGGAAGGTTTTGAAGTTACCAAGTATGGTCATGGACGTGTTGCACTTATAGGATTTCCTA 337
Query 241 GTGTCGGAAAGTCCACGCTTTTGACTATGTTAACTGGAACACATTCTGAAGCAGCCTCAT 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 338 GTGTCGGAAAGTCCACGCTTTTGACTATGTTAACTGGAACACATTCTGAAGCAGCCTCAT 397
Query 301 ATGAATTTACAACACTTACATGCATCCCTGGCGTAATTCACTACAATGACACAAAGATTC 360
||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||
Sbjct 398 ATGAATTTACAACACTTACATGCATCCCTGGTGTAATTCACTACAACGACACAAAGATTC 457
Query 361 AGCTTCTCGATCTTCCTGGGATTATTGAAGGTGCTTCGGAAGGAAAGGGGCGAGGAAGGC 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 458 AGCTTCTCGATCTTCCTGGGATTATTGAAGGTGCTTCGGAAGGAAAGGGGCGAGGAAGGC 517
Query 421 AGGTTATTGCTGTTGCAAAATCTTCCGACCTTGTATTGATGGTTCTTGATGCCTCAAAAG 480
||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 518 AGGTTATTGCTGTTGCAAAGTCTTCCGACCTTGTATTGATGGTTCTTGATGCCTCAAAA- 576
Query 481 TGAGTGAAGGCCACAGACAAATACTGACTAAGGAACTTGAGGCAGTGGGCTTGCGGCTAA 540
|| ||||||||||| |||||| ||||||||||||||||||||||||||||||| ||||
Sbjct 577 --AGCGAAGGCCACAGGCAAATATTGACTAAGGAACTTGAGGCAGTGGGCTTGCGACTAA 634
Query 541 ACAAAACTCCTCCGCAGATATACTTTAAAAAGAAAAAGACTGGTGGAATCTCTTTCAACA 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 635 ACAAAACTCCTCCGCAGATATACTTTAAAAAGAAAAAGACTGGTGGAATCTCTTTCAACA 694
Query 601 CTACAGCACCCTTGACTCACATTGATGAGAAGCTCTGTTATCAAATCCTGCATGAATACA 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 695 CTACAGCACCCTTGACTCACATTGATGAGAAGCTCTGTTATCAAATCCTGCATGAATACA 754
Query 661 AGATTCACAATGCTGAGGTGCTATTTCGTGAGAATGCCACAGTGGATGACTTTATTGATG 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 755 AGATTCACAATGCTGAGGTGCTATTTCGTGAGAATGCCACAGTGGATGACTTTATTGATG 814
Query 721 TCATTGAAGGCAACCGAAAATATATTAAGTGTGTATATGTCTACAACAAAATAGATGTTG 780
|||||||||||||||| || |||||||||||||| |||||||||||||||||||||||||
Sbjct 815 TCATTGAAGGCAACCGCAAGTATATTAAGTGTGTTTATGTCTACAACAAAATAGATGTTG 874
Query 781 TTGGAATTGATGATGTGGATAGACTATCCCGGCAGCCAAATTCCATTGTTATTAGCTGCA 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 875 TTGGAATTGATGATGTGGATAGACTATCCCGGCAGCCAAATTCCATTGTTATTAGCTGCA 934
Query 841 ATCTTAAGCTTAACTTAGACAGACTACTTGCAAGGATGTGGGACGAAATGGGCCTTGTGA 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 935 ATCTTAAGCTTAACTTAGACAGACTACTTGCAAGGATGTGGGACGAAATGGGCCTTGTGA 994
Query 901 GAGTTTACTCGAAGCCGCAAGGCCAGCAACCAGATTTCGATGAGCCTTTTGTCCTCTCAT 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 995 GAGTTTACTCGAAGCCGCAAGGCCAGCAACCAGATTTCGATGAGCCTTTTGTCCTCTCAT 1054
Query 961 CTGATCGAGGTGGCTGTACAGTGGAAGACTTCTGTAACCACGTCCACAGGACTCTGGTGA 1020
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 1055 CTGATCGAGGTGGCTGCACAGTGGAAGACTTCTGTAACCACGTCCACAGGACTCTGGTGA 1114
Query 1021 AGGATATGAAGTATGCACTCGTTTGGGGCACAAGCACAAGGCACAATCCTCAGAATTGTG 1080
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 1115 AGGATATGAAGTATGCACTCGTTTGGGGCACAAGCACAAGGCACAATCCACAGAATTGTG 1174
Query 1081 GTCTTTCTCAACATCTTGAAGACGAAGATGTTGTTCAGATCGTCAAGAAAAAGGAGAGAG 1140
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1175 GTCTTTCTCAACATCTTGAAGACGAAGATGTTGTTCAGATCGTCAAGAAAAAGGAGAGAG 1234
Query 1141 ATGAAGGAGGAAGAGGCCGGTTCAAGTCACACTCAAACGCCCCTGCTAGAATTGCAGACC 1200
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1235 ACGAAGGAGGAAGAGGCCGGTTCAAGTCACACTCAAACGCCCCTGCTAGAATTGCAGACA 1294
Query 1201 GAGAGAAGAAAGCTCCTCTGAAGCAATAAGCTTTTAGCTGATAAGTGATTTCCATACACC 1260
||||||| ||||||||||| |||||||||||||||||||||||||| || |||||||| |
Sbjct 1295 GAGAGAAAAAAGCTCCTCTTAAGCAATAAGCTTTTAGCTGATAAGTCATCTCCATACATC 1354
Query 1261 CATCTCCACCATCAATAGTCTTGGATGGTTTCACCTGAGTAAGATTTACTATGTTGTATC 1320
|||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 1355 CATCTCCACCATCA-TAGTCGTGGATGGTTTCACCTGAGTAAGATTTACTATGTTGTATC 1413
Query 1321 TGAATCCTTTTTGTT 1335
||||||| |||||||
Sbjct 1414 TGAATCCGTTTTGTT 1428
> AT1G72660.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr1:27353791-27356670
FORWARD LENGTH=1530
Length=1530
Score = 1561 bits (845), Expect = 0.0
Identities = 1091/1210 (90%), Gaps = 15/1210 (1%)
Strand=Plus/Plus
Query 26 AATGGGGATCATCGAAAGGATTAAGGAAATCGAGGCCGAGATGGCTCGGACTCAGAAGAA 85
|||||| || | |||||||| || || ||||| ||||||||||||||||| ||||||||
Sbjct 203 AATGGGAATTGTGGAAAGGATAAAAGAGATCGAAGCCGAGATGGCTCGGACGCAGAAGAA 262
Query 86 TAAAGCTACAGAGTATCATCTTGGTCAGCTCAAGGCAAAGATTGCAAAGCTCAGGACACA 145
|||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||
Sbjct 263 CAAAGCTACAGAGTATCATCTTGGTCAGCTCAAGGCAAAAATTGCAAAGCTCAGAACACA 322
Query 146 ACTGTTGGAGCCTCCAAAAGG-TGCTAGTGGAGGCGGGGAAGGTTTTGAAGTTACCAAGT 204
||| || |||||||||||||| | |||||||||| ||||| |||||||||||||| ||||
Sbjct 323 ACTCTTAGAGCCTCCAAAAGGCT-CTAGTGGAGGTGGGGATGGTTTTGAAGTTACAAAGT 381
Query 205 ATGGTCATGGACGTGTTGCACTTATAGGATTTCCAAGTGTCGGAAAGTCCACGCTTTTGA 264
|||| ||||||||||||||||||||||||||||||||||| |||||||| ||||||||||
Sbjct 382 ATGGGCATGGACGTGTTGCACTTATAGGATTTCCAAGTGTTGGAAAGTCTACGCTTTTGA 441
Query 265 CTATGTTAACTGGAACACATTCTGAAGCAGCCTCATATGAATTTACAACACTTACATGCA 324
| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 442 CAATGTTAACTGGCACACATTCTGAAGCAGCCTCATATGAATTTACAACACTTACATGCA 501
Query 325 TCCCTGGCGTAATTCACTACAATGACAC-AAAGATTCAGCTT-CTCGATCTTCCTGGGAT 382
||||||| || ||||||||||||||||| ||| || ||| || || ||||||||||||||
Sbjct 502 TCCCTGGAGTTATTCACTACAATGACACCAAA-ATCCAG-TTGCTTGATCTTCCTGGGAT 559
Query 383 TATTGAAGGTGCTTCGGAAGGAAAGGGGCGAGGAAGGCAGGTTATTGCTGTTGCAAAATC 442
||||||||||||||| ||||||||||| ||||| ||||||||||||||||||||||| ||
Sbjct 560 TATTGAAGGTGCTTCAGAAGGAAAGGGACGAGGGAGGCAGGTTATTGCTGTTGCAAAGTC 619
Query 443 TTCCGACCTTGTATTGATGGTTCTTGATGCCTCAAAAGTGAGTGAAGGCCACAGACAAAT 502
||| |||||||| |||||||||||||||||||||||| |||||||||||||| |||||
Sbjct 620 TTCAGACCTTGTGTTGATGGTTCTTGATGCCTCAAAA---AGTGAAGGCCACAGGCAAAT 676
Query 503 ACTGACTAAGGAACTTGAGGCAGTGGG-CTTGCGGCTAAACAAAACTCCTCCGCAGATAT 561
|||||||||||| ||||| ||||| || || ||| || ||||||| ||||| |||||||
Sbjct 677 ACTGACTAAGGAGCTTGAAGCAGTTGGTCT-GCGTCTGAACAAAAGACCTCCACAGATAT 735
Query 562 ACTTTAAAAAGAAAAAGACTGGTGGAATCTCTTTCAACACTACAGCACCCTTGACTCACA 621
||||||| ||||| ||||||||||| || ||||||||||||||| | |||||||||| ||
Sbjct 736 ACTTTAAGAAGAAGAAGACTGGTGGGATTTCTTTCAACACTACAACCCCCTTGACTCGCA 795
Query 622 TTGATGAGAAGCTCTGTTATCAAATCCTGCATGAATACAAGATTCACAATGCTGAGGTGC 681
||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
Sbjct 796 TTGATGAGAAGCTCTGTTATCAAATTCTGCATGAATACAAGATTCACAATGCTGAGGTTC 855
Query 682 TATTTCGTGA-GAATGCCACAGTGGATGACTTTATTGATGTCATTGAAGGCAACCGAAAA 740
|||||||||| || ||| || ||||||||||||||||||||| |||||||||| || |||
Sbjct 856 TATTTCGTGAAGA-TGCTACGGTGGATGACTTTATTGATGTCGTTGAAGGCAATCGCAAA 914
Query 741 TATATTAAGTGTGTATATGTCTACAACAAAATAGATGTTGTTGGAATTGATGATGTGGAT 800
|| || || |||||||||||||||||||||||||||||||||||||| ||||| || |||
Sbjct 915 TACATCAAATGTGTATATGTCTACAACAAAATAGATGTTGTTGGAATCGATGACGTTGAT 974
Query 801 AGACTATCCCGGCAGCCAAATTCCATTGTTATTAGCTGCAATCTTAAGCTTAACTTAGAC 860
|| || | |||||||||||||| ||||||||||||||||| || ||||| |||||||||
Sbjct 975 AGGCTGGCACGGCAGCCAAATTCTATTGTTATTAGCTGCAACCTAAAGCTAAACTTAGAC 1034
Query 861 AGACTACTTGCAAGGATGTGGGACGAAATGGGCCTTGTGAGAGTTTACTCGAAGCCGCAA 920
|||||||||||||| ||||||||||||||||| ||||||||||||||||| ||||| |||
Sbjct 1035 AGACTACTTGCAAGAATGTGGGACGAAATGGGACTTGTGAGAGTTTACTCAAAGCCTCAA 1094
Query 921 GGCCAGCAACCAGATTTCGATGAGCCTTTTGTCCTCTCATCTGATCGAGGTGGCTGTACA 980
|||||||||||||||||||||| || |||||||||||| ||||| |||||||||| |||
Sbjct 1095 AGCCAGCAACCAGATTTCGATGAACCCTTTGTCCTCTCAGCTGATAGAGGTGGCTGCACA 1154
Query 981 GTGGAAGACTTCTGTAACCACGTCCACAGGACTCTGGTGAAGGATATGAAGTATGCACTC 1040
|| ||||| ||||||||||| |||||||| |||||||||||||||||||||||||||||
Sbjct 1155 GTTGAAGATTTCTGTAACCAAGTCCACAGAACTCTGGTGAAGGATATGAAGTATGCACTA 1214
Query 1041 GTTTGGGGCACAAGCACAAGGCACAATCCTCAGA-ATTGTGGTCTTTCTCAACATCTTGA 1099
||||||||||||||| | |||||| | ||||| | | |||||||||| ||| ||||||||
Sbjct 1215 GTTTGGGGCACAAGCGCTAGGCACTACCCTCA-ACACTGTGGTCTTTTTCATCATCTTGA 1273
Query 1100 AGACGAAGATGTTGTTCAGATCGTCAAGAAAAAGGAGAGAGATGAAGGAGGAAGAGGCCG 1159
|| |||||||||||||| || ||||||||||||| |||||| ||||| ||||| || ||
Sbjct 1274 GGATGAAGATGTTGTTCAAATTGTCAAGAAAAAGGTGAGAGAAGAAGGGGGAAGGGGACG 1333
Query 1160 GTTCAAGTCACACTCAAACGCCCCTGCTAGAATTGCAGACCGAGAGAAGAAAGCTCCTCT 1219
||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||| ||
Sbjct 1334 GTTCAAGTCACACTCGAACGCACCTGCTAGAATTGCAGACCGAGAGAAGAAAGCTCCACT 1393
Query 1220 GAAGCAATAA 1229
|||||||||
Sbjct 1394 AAAGCAATAA 1403
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 65712513405
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5