BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg471969
Length=2892
Score E
Sequences producing significant alignments: (Bits) Value
AT1G17600.1 | Symbols: | Disease resistance protein (TIR-NBS-L... 3256 0.0
AT5G40100.1 | Symbols: | Disease resistance protein (TIR-NBS-L... 1219 0.0
> AT1G17600.1 | Symbols: | Disease resistance protein (TIR-NBS-LRR
class) family | chr1:6052936-6056664 REVERSE LENGTH=3332
Length=3332
Score = 3256 bits (1763), Expect = 0.0
Identities = 1964/2061 (95%), Gaps = 13/2061 (1%)
Strand=Plus/Plus
Query 1 ATGGCGTCCTCCTCTGCACCTCGTGTATCGAAGTACGACGTCTTCCTCAGCTTCCGAGGA 60
|||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 93 ATGGTGTCCTCCTCTGCACCTCGTGTATCGAAGTACGACGTCTTCCTCAGCTTCCGTGGA 152
Query 61 GAAGACACCCGAAAAACAATCGTTAGTCATTTATACGCAGCACTTGATAGCAGAGGAATT 120
||||||||||| ||||| ||||| ||||||||||| |||||||||||||||||||| |||
Sbjct 153 GAAGACACCCGCAAAACCATCGTCAGTCATTTATATGCAGCACTTGATAGCAGAGGCATT 212
Query 121 GTTACTTTCAAAGACGACCAAAGGCTTGAGATAGGAGATCACATTTCTGATGAACTCCGC 180
|||||||||||||| |||||||||||||||||||| ||||||||||| |||||||||| |
Sbjct 213 GTTACTTTCAAAGATGACCAAAGGCTTGAGATAGGCGATCACATTTCCGATGAACTCCAC 272
Query 181 AGAGCACTAGGGAGTTCGAGTTTCGCTGTTGTGGTTCTCTCCGAGAACTACGCTACTTCC 240
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 273 AGAGCACTAGGGAGTTCGAGTTTCGCTGTTGTTGTTCTCTCCGAGAACTACGCTACTTCG 332
Query 241 AGGTGGTGCTTATTGGAACTTCAACTGATAATGGAGCTTATGAAAGAGGGAAGACTTGAA 300
|| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 333 AGATGGTGCTTATTGGAACTTCAACTGATAATGGAGCTTATGAAGGAGGGAAGACTTGAA 392
Query 301 GTATTTCCCATCTTCTATGGAGTAGATCCTTCCGTGGTGAGGCATCAGCTAGGAAGTTTC 360
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 393 GTCTTTCCCATCTTCTATGGAGTAGATCCTTCCGTGGTGAGGCATCAGCTAGGAAGTTTC 452
Query 361 GCTTTAGAAAAGTATCAAGGTCCTGAAATGGCGGATAAGGTTCTCAGGTGGAGAGAAGCT 420
|||||| |||||| ||||||| |||||||| ||||||||||||||||||||||||||||
Sbjct 453 TCTTTAGTAAAGTACCAAGGTCTTGAAATGGTGGATAAGGTTCTCAGGTGGAGAGAAGCT 512
Query 421 CTTAACCTAATCGCCAATCTTTCAGGCGTGGTTTCAAGCCACTGCGTTGATGAGGCTATA 480
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 513 CTTAACCTAATCGCCAATCTTTCAGGCGTGGTTTCAAGCCACTGTGTTGATGAGGCTATA 572
Query 481 ATGGTTGGAGAAATTGCCAGAGATATTTCAAGACGTGTGACATTGTTGCATAAAATAGAC 540
||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||
Sbjct 573 ATGGTTGGAGAAATTGCTAGAGATATTTCAAGACGTGTGACATTGATGCATAAAATAGAC 632
Query 541 TCTGGCAATATTGTTGGGATGAAAGCTCACATGGAAGGTCTTAATCATCGCTTGGATCTG 600
||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||| |
Sbjct 633 TCTGGAAATATTGTTGGGATGAAAGCTCACATGGAAGGTCTTAATCATCTCTTGGATCAG 692
Query 601 GAATCCAATGAGGTTCTCATGGTAGGAATCTGGGGAATGGGAGGAATTGGGAAAACCTCC 660
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 693 GAATCCAATGAGGTTCTCCTGGTAGGAATCTGGGGAATGGGAGGAATTGGGAAAACCTCC 752
Query 661 ATTGCTAAGTGTCTCTATGACCAGCTTTCACCTAAATTTCCAGCTCATTGTTTCACAGAA 720
|||| ||||||||||||||||||||| |||||||||||||||||||||||||||| ||||
Sbjct 753 ATTGTTAAGTGTCTCTATGACCAGCTCTCACCTAAATTTCCAGCTCATTGTTTCATAGAA 812
Query 721 AACATTAAGAGTGTTAGTAAAGATATTGGCCATGATCTAAAGCGTTTGCAAAAAGAAATG 780
||||||||||||||||||||||| | ||||||||||||||||| ||||||||||||| ||
Sbjct 813 AACATTAAGAGTGTTAGTAAAGACAATGGCCATGATCTAAAGCATTTGCAAAAAGAATTG 872
Query 781 CTCTGCAATATCCTCTGTGATGATATTAGGTTATGGAGCGTGGAAGCTGGATGCCAAGAG 840
|||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 873 CTCTCCAGTATCCTCTGTGATGATATTAGGTTATGGAGCGTGGAAGCTGGATGCCAAGAG 932
Query 841 ATAAAGAAGAGACTTGGGAATCAGAGGGTTTTTCTTGTGCTTGACGGTGTGGATAAAGTG 900
||||| ||||||||||||||||| | |||||||||||||||||| |||||||||||||||
Sbjct 933 ATAAAAAAGAGACTTGGGAATCAAAAGGTTTTTCTTGTGCTTGATGGTGTGGATAAAGTG 992
Query 901 TCACAGGTGCATGCTTTGGCAAAAGATAAAAACTGGTTTGGTCCTGGGAGCCGAATTATC 960
| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 993 GCGCAGGTGCATGCTTTGGCAAAAGAGAAAAACTGGTTTGGTCCTGGGAGCCGAATTATC 1052
Query 961 ATAACTACTCGAGATATGGGCTTGCTCAATACCTGTGGAGTAGAAATCGTTTATGAGGTT 1020
||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 1053 ATAACCACTCGAGATATGGGCTTGCTCAATACCTGTGGAGTAGAAGTCGTTTATGAGGTT 1112
Query 1021 AAGTGCTTGGATGATAAGGATGCCCTCCACATGTTTAAACAGATTGCTTTTGAAGGAGGA 1080
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 1113 AAGTGCTTGGATGATAAGGATGCCCTCCAGATGTTTAAACAGATTGCTTTTGAAGGAGGA 1172
Query 1081 CTTCCTCC---TGATAGTTTTGAGCAACTCTCACTCCGAGCTTCTCGGCTTGCTCACGGG 1137
|||||||| ||| ||||||| ||||||||| ||||||||||| |||||||||||||
Sbjct 1173 CTTCCTCCTTGTGAGGGTTTTGACCAACTCTCAATCCGAGCTTCTAAGCTTGCTCACGGG 1232
Query 1138 CTTCCTTCTGCCATTCAAGCTTATGCCTTATTTCTCCGTGGAAGGACCGCGACTCCTGAT 1197
|||||||||||||||||||| ||||| |||||||||||||||||||| |||| ||||||
Sbjct 1233 CTTCCTTCTGCCATTCAAGCCTATGCATTATTTCTCCGTGGAAGGACAGCGAGTCCTGA- 1291
Query 1198 GG-GTGGGAAGAAGCATTGAGTGCACTTGAAAGCAGTCTTGACGAGAATATAATGGAAAT 1256
|| ||||||||||||| || ||||||||||||||||||||||||||||||||||||||||
Sbjct 1292 GGAGTGGGAAGAAGCACTGGGTGCACTTGAAAGCAGTCTTGACGAGAATATAATGGAAAT 1351
Query 1257 CTTGAAAATCAGCTACGAGGGCTTACCAAAACCACATCAGAATGTATTCCTTCATGTTGT 1316
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1352 CTTGAAAATTAGCTACGAGGGCTTACCAAAACCACATCAGAATGTATTCCTTCATGTTGT 1411
Query 1317 CTGTCTCTTCAATGGAGACACTCTCCAGCGTATCACTTCCCTTCTTCATGGCCCCATACC 1376
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 1412 CTGTCTCTTCAATGGAGACACTCTCCAGCGAATCACTTCCCTTCTTCATGGCCCCATACC 1471
Query 1377 TCAGAGTAGCCTGTGGATAAGAGTTTTAGCAGAGAAATCTCTCATCAAAATATCAACTAA 1436
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1472 TCAGAGCAGCCTGTGGATAAGAGTTTTAGCAGAGAAATCTCTCATCAAAATATCAACTAA 1531
Query 1437 TGGATCTGTAATCATGCACAAGTTGGTAGAACAAATGGGTAGAGAAATTATCCGCGACAA 1496
||||||||| ||||||||||||||||| ||||||||||| |||||||||||||||||| |
Sbjct 1532 TGGATCTGTTATCATGCACAAGTTGGTCGAACAAATGGGAAGAGAAATTATCCGCGACGA 1591
Query 1497 TATGTCTTTGGCTCGAAAATTCCTCAGGGATCCTATGGAAATTCGTGATGCCTTGGCTTT 1556
||||||||||||||||| |||||||||||||||||||||||||| | |||| |||||||
Sbjct 1592 CATGTCTTTGGCTCGAAAGTTCCTCAGGGATCCTATGGAAATTCGCGTTGCCCTGGCTTT 1651
Query 1557 CAGAGACGCAGGAGAACAAACTGAATGCATGTGCCTACACACGTGTGAGT-TGACCTGTG 1615
|||||||| ||||||||||||||||||||||||||||||||||||||| | |||||||||
Sbjct 1652 CAGAGACGGAGGAGAACAAACTGAATGCATGTGCCTACACACGTGTGA-TATGACCTGTG 1710
Query 1616 TGTTGTCCATGGAGGCCAGTGTTGTTGGCCGTATGCATAATCTCAAGTTTCTCAAGGTTT 1675
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1711 TGTTATCCATGGAGGCCAGTGTTGTTGGCCGTATGCATAATCTCAAGTTTCTCAAGGTTT 1770
Query 1676 ACAAGCATGTAGATTACAGAGAGTCGAAGCTGCAACTCATTCCAGACCAACAGTTCCTGC 1735
|||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||
Sbjct 1771 ACAAGCATGTAGATTACAGAGAGTCGAATCTGCAACTCATTCCAGACCAACCGTTCCTGC 1830
Query 1736 CTCGTAGCCTACGGCTATTCCATTGGGATGCATTTCCATTGAGAGCCCTGCCTTCCGGCT 1795
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 1831 CTCGTAGCCTACGGCTATTCCATTGGGATGCATTTCCATTGAGAGCCCTGCCTTCCGGTT 1890
Query 1796 CTGATCCATGTTTTCTTGTTGAACTCAATCTGCGTCACAGTGATTTAGAAACTCTCAGGA 1855
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 1891 CTGATCCATGTTTTCTTGTTGAACTCAATCTGCGTCACAGTGATTTAGAAACTCTCTGGA 1950
Query 1856 CTTGTA------TGTTGAAGAGTTTGAAGAGACTAGATGTGACGGGATCTAAGTATCTCA 1909
| | | ||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 1951 GTGGAACACCGATGTTGAAGAGTTTGAAGAGACTAGATGTGACGGGATCTAAGCATCTCA 2010
Query 1910 AGCAACTTCCAGATCTTTCAAGTATCACGAGTCTTGAGGAATTGCTTCTGGAACAATGCA 1969
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2011 AGCAACTTCCAGATCTTTCAAGTATCACGAGTCTTGAGGAATTGCTTCTGGAACAATGCA 2070
Query 1970 CGAGACTGGATGGCATTCCAGAGTGTATTGGAAAAAGGTCTACCCTAAAGAAGCTTAAGC 2029
|||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 2071 CGAGACTGGAGGGCATTCCAGAGTGTATTGGAAAAAGGTCTACCTTAAAGAAGCTTAAGC 2130
Query 2030 TATCCTACCGTGGTGGGCGTA 2050
||||||||||||| |||||||
Sbjct 2131 TATCCTACCGTGGAGGGCGTA 2151
Score = 808 bits (437), Expect = 0.0
Identities = 491/518 (95%), Gaps = 0/518 (0%)
Strand=Plus/Plus
Query 2055 GCAGCAACATATTGGATTGGAGTTCCCAGACGCAAAAGTGAAAATGGATGCACTTATAAA 2114
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2189 GCAGCAACATATTGGATTGGAGTTCCCAGACGCAAAAGTGAAAATGGATGCACTTATAAA 2248
Query 2115 CATATCGATTGGTGGAGACATAAGTTTTGAGTTTTGCTCAAAATTTAGAGGATATGCTGA 2174
|||||||||||| |||||||| | |||||||||| | |||||||||||||||||||||||
Sbjct 2249 CATATCGATTGGGGGAGACATTACTTTTGAGTTTCGTTCAAAATTTAGAGGATATGCTGA 2308
Query 2175 ATACGTCTCTTTCAATTCTGAGCAACAGATACCTGTTATATCGACGATGATTCTGCAACA 2234
|||||||||||| |||||||||||||||||||| |||||||| |||||| |||||||||
Sbjct 2309 ATACGTCTCTTTTAATTCTGAGCAACAGATACCCATTATATCGGCGATGAGTCTGCAACA 2368
Query 2235 AGCACCTTGGGTCATCTCAGAGTGCAATAGATTCAATTCCCTCAGCATCATGAGGTTCAG 2294
||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||
Sbjct 2369 AGCACCTTGGGTCATCTCAGAGTGCAACAGATTCAATTCCCTCCGCATCATGAGGTTCAG 2428
Query 2295 CCACAAAGAAAACGGTGAATCTTTCTCCTTTGACATCTTTCCAGATTTTCCCGACCTGAA 2354
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 2429 CCACAAAGAAAACGGTGAATCTTTCTCCTTTGACGTCTTTCCAGATTTTCCCGACCTGAA 2488
Query 2355 AGAGCTTAAACTAGTGAACTTAAACATCCGGAGAATCCCATCTGGGATTTGTCACTTGGA 2414
|||||| ||||||||||||||||||||| ||| |||||||||||||||||||||| ||||
Sbjct 2489 AGAGCTAAAACTAGTGAACTTAAACATCAGGAAAATCCCATCTGGGATTTGTCACCTGGA 2548
Query 2415 GTTACTAGAGAAGCTGGACCTCAGCGGAAATGATTTTGAGAACTTACCAGAAGCTATGAA 2474
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2549 TTTACTAGAGAAGCTGGACCTCAGCGGAAATGATTTTGAGAACTTACCAGAAGCTATGAG 2608
Query 2475 CAGCCTTTCCCGGCTGAAAACTCTCTGGCTTCGAAACTGCTTCAAACTCGAGGAGTTGCC 2534
|||||||||||| | |||||||||||||||| ||||||||| || ||| ||||||||||
Sbjct 2609 TAGCCTTTCCCGGTTAAAAACTCTCTGGCTTCAAAACTGCTTTAAGCTCCAGGAGTTGCC 2668
Query 2535 AAAGCTAACTCAGGTGCAGACACTGACACTTACCAACT 2572
|||||||||||||||||||||||| |||||||||||||
Sbjct 2669 AAAGCTAACTCAGGTGCAGACACTTACACTTACCAACT 2706
Score = 318 bits (172), Expect = 2e-85
Identities = 268/309 (87%), Gaps = 28/309 (9%)
Strand=Plus/Plus
Query 2573 TCAAGATGAGGGAAGATACTGTTTGCTTGAGCTTTGCCTTGAAAACTGCAAGAGTGTTGA 2632
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 2747 TCAAGATGAGGGAAGATACTGTTTGCTTGAGCTTTGCCTTGAAAATTGCAAGAGTGTTGA 2806
Query 2633 ATCATTGTCAGAT---C--AG-C--TT-----AG-T--CATG---AG----CAG---CCA 2666
||||||||||||| | || | || || | |||| || ||| |||
Sbjct 2807 ATCATTGTCAGATCAGCTTAGTCATTTCACCAAGTTGACATGTTTAGATCTCAGCAACCA 2866
Query 2667 TGATTTTGAGACATTGCCACCAAGCATCAGAGATCTTACCTCATTGGTAACACTTTGCCT 2726
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 2867 TGATTTTGAGACATTGCCATCAAGCATCAGAGATCTTACCTCATTGGTAACACTTTGCCT 2926
Query 2727 TAATAACTGCAAGAAACTCAAATCAGTGGAAAGAA-TCCCCACGTCTCTCCAATTTCTGG 2785
||||||||||||||||||||||| ||||||| || | ||| ||||||||||||||| |
Sbjct 2927 CAATAACTGCAAGAAACTCAAATCGGTGGAAA-AACTTCCCTTGTCTCTCCAATTTCTCG 2985
Query 2786 ATGCACACGGCTGTGATTCCCTCGAAGCTGGTTGTGTAGAACATTTTAAGGACATACCAA 2845
||||||||||||||||||| ||||||||||||| || |||||||||| ||||||||||||
Sbjct 2986 ATGCACACGGCTGTGATTCTCTCGAAGCTGGTTCTGCAGAACATTTTGAGGACATACCAA 3045
Query 2846 ACAAAGAGG 2854
|||| ||||
Sbjct 3046 ACAAGGAGG 3054
> AT5G40100.1 | Symbols: | Disease resistance protein (TIR-NBS-LRR
class) family | chr5:16043929-16047355 FORWARD LENGTH=3101
Length=3101
Score = 1219 bits (660), Expect = 0.0
Identities = 1641/2098 (78%), Gaps = 134/2098 (6%)
Strand=Plus/Plus
Query 1 ATGGCGTCCTCCTCTGCACCTCGTGTATCGAAG-TACGACGTCTTCCTCAGCTTCCGAGG 59
||||| ||||| || ||| |||||| ||| || || || |||||| | || ||||| ||
Sbjct 48 ATGGCTTCCTCATCCGCATCTCGTGCATC-CAGCTATGATGTCTTCTTAAGTTTCCGTGG 106
Query 60 AGAAGACACCCGAAAAACAATCGTTAGTCATTTATACGCAGCACTTGA-TAGCAGAGGAA 118
|||||||| ||| | | ||||| || ||||| |||| ||||||| | ||||||||||
Sbjct 107 GGAAGACACTCGACATTCTATCGTCAGCCATTTGTACGAAGCACTT-ACCAGCAGAGGAA 165
Query 119 TTGTTACTTTCAAAGACGACCAAAGGCTTGAGATAGGAGATCACATTTCTGATGAACTCC 178
||| ||| |||||||||||| ||||||||||| |||| |||||||||||||| |||||||
Sbjct 166 TTGCTACCTTCAAAGACGACAAAAGGCTTGAGCTAGGTGATCACATTTCTGAAGAACTCC 225
Query 179 GCAGAG-CACTAG-GGAGTTCGAG-TTTCGCTGTTGTGGTTCTCTCCGAGAACTACGCTA 235
|||| || | | || |||| || ||| | ||| ||||||||||| ||||||||| |||
Sbjct 226 AAAGAGCCA-TTGAGG-GTTC-AGATTTTGTTGTCGTGGTTCTCTCAGAGAACTACCCTA 282
Query 236 CTTCCAGGTGGTGCTTATTGGAACTTCAACT-GATAATGGAGCTT-ATGAAAGAGGGAAG 293
|||| |||||||||||| |||| || ||| | ||||||||||||| | || ||||||||
Sbjct 283 CTTCTAGGTGGTGCTTAATGGAGCTCCAA-TCGATAATGGAGCTTCA-GATGGAGGGAAG 340
Query 294 ACTTGAAGTATTTCCCATCTTCTATGGAGTAGATCCTTCCGTGGTGAGGCATCAGCTAGG 353
||||| || |||||| ||||||| ||||||| || || | |||||| ||||||||||
Sbjct 341 ACTTGGTGTCTTTCCCGTCTTCTACAGAGTAGAACCCTCTGCAGTGAGGTATCAGCTAGG 400
Query 354 AAGTTTCGCTTTAGAAAAGTATCAA-G-G-TCCTGAAATGGCGGATAAGGTTCTCAGGTG 410
|||||||| | ||||| ||| ||| | | ||| ||||||| |||| ||||| || |||
Sbjct 401 AAGTTTCGATCTAGAAGGGTACCAACGTGATCCACAAATGGCTGATATGGTTCCCAAGTG 460
Query 411 GAGAGAAGCTCTTAACCTAATCGCCAATCTTTCAGGCGTGGTTTCAAGCCACTGCGTTGA 470
|||| |||||||||| || || ||| ||||||||||||||| || | || ||| ||||
Sbjct 461 GAGACAAGCTCTTAAACTGATTGCCGATCTTTCAGGCGTGGCATCGGGACAATGCATTGA 520
Query 471 TGAGGCTA-TAATGGTT-GGAGAAATTG-CCAGAGATATTTC-AAGACGTGTGACATTGT 526
|||||| | | |||||| ||| |||||| | | ||||||||| ||| || |||||||
Sbjct 521 TGAGGCAACT-ATGGTTCGGA-AAATTGTCGA-AGATATTTCAAAG-CGCAAGACATTGA 576
Query 527 TGCATAAAATAGACTCT-GGCAATATTGTTGG-GAT-GAAAGCTCACATGGAAGGTCTTA 583
|||||| ||||| | | | ||| ||||||| | | || | ||||| || ||||||| |
Sbjct 577 AGCATAAGATAGA-TTTCAGAAATTTTGTTGGTG-TGGATA-CTCACCTGCAAGGTCTCA 633
Query 584 A-TCATCGCTTGGATC-TGGAATCC----A--ATGAGGTTC-TCATGGTAGGAATCTGGG 634
| || | |||||| | |||| ||| | ||||||||| | ||| | ||||| ||||
Sbjct 634 AGTC-GCTCTTGGA-CATGGACTCCAATAATGATGAGGTTCGT-ATGATTGGAATATGGG 690
Query 635 GAATGGGAGGAATTGGGAAAACCTCCATTGCTAAGTGTCTCTATGACCAGCTTTCACCTA 694
|||||||||| ||||| |||||| |||| || |||||||||||||||||||| ||| | |
Sbjct 691 GAATGGGAGGCATTGGAAAAACCACCATCGCCAAGTGTCTCTATGACCAGCTCTCATC-A 749
Query 695 -AATTTCCAGCTCA-TTGTTTCACAGAAAACATT-AAGAGTGTT-AGTAAAGATATTGGC 750
||||| ||||| | || ||||||| || ||||| ||| || || | ||||| | |
Sbjct 750 CAATTTACAGCT-AGTTATTTCACACAAGACATTAAAG-GTATTCA-TAAAG--A---G- 800
Query 751 CATGATCTAAAGCGTTTGCAAAA-AGAAATGCTCTGCAATATCCTCTGTGATGATATTAG 809
| ||||||| || ||||||||| || | | |||| ||||| |||| ||||||||||||
Sbjct 801 CTTGATCTACTGCATTTGCAAAACAG-ACTTCTCTACAATACCCTCGGTGATGATATTAT 859
Query 810 GTTATGGAGCGTGGAAGCTGGATGCCAAGAGATA-AAGAAGAGACTTGGGAATCAGAGGG 868
| ||||| |||||||||||| || | | ||| | | ||||||||||| || | ||
Sbjct 860 GCCGTGGAGTGTGGAAGCTGGACGCGAGGTCATAGCGGCA-AGACTTGGGAACCACAAGG 918
Query 869 TTTTTCTTGTGCTTGACGGTGTGGATAAAGT-GTCACAGGTGCATGCTTTGGCAAAAGAT 927
|| ||||||||||||| |||||||||||| | || |||| | |||||| ||||||||||
Sbjct 919 TTCTTCTTGTGCTTGATGGTGTGGATAAACTGGT-ACAGATCCATGCTCTGGCAAAAGAG 977
Query 928 A-AAAACTGGTTTGGTCCTGGGAGCCGAATTATCATAACTACTCGAGATATGGGCTTGCT 986
| || | |||||||||| | ||||||||| |||||||| || ||||| | |||||||||
Sbjct 978 ACAAGA-TGGTTTGGTCGTCAGAGCCGAATCATCATAACCACCCGAGACAAGGGCTTGCT 1036
Query 987 CAATACCTGTGGAGTAGAAATCGTTTATGAGGTTAAGTGCTTGGATGATAAGGATGCCCT 1046
||||| ||||||||| ||| | | ||||| |||||||||||||| || |||||| ||||
Sbjct 1037 CAATAGTTGTGGAGTAAAAACCATCTATGATGTTAAGTGCTTGGACGACAAGGATTCCCT 1096
Query 1047 CCACATGTTTAAACAGATTGCTTTTGAAGGAGG-ACT--TCCTCCTGAT-AGTTTTGAGC 1102
|| ||||||||||||||||||||||||||||| | | |||| ||| | | |||||| |
Sbjct 1097 GCAGATGTTTAAACAGATTGCTTTTGAAGGAGGCAGTCCTCCTTCTGTTGA-TTTTGAAC 1155
Query 1103 AACTCTCACTCCGAGCTTCTCGGCTTGCTCACGGGCTTCCTTCTGCCATTCAAGCTTATG 1162
| |||||| ||||||| |||||||||| |||||||||||||||||| ||||||| ||||
Sbjct 1156 AGCTCTCAATCCGAGCAGCTCGGCTTGCGCACGGGCTTCCTTCTGCCCTTCAAGCCTATG 1215
Query 1163 CCTTATTTCTCCGTGGAAGGACCG-CGACTCCTGATGGGTGGGAAGAAGCATTGA-GTGC 1220
|||||||||||||||||||| || | ||||||| | |||||||||||| | | |||
Sbjct 1216 CCTTATTTCTCCGTGGAAGGGCCAACT-CTCCTGAAGAATGGGAAGAAGCAGT-ATGTGG 1273
Query 1221 ACTTGAAAGCAGTCTTGACGAGAATATAATGGAAATCTTGAAAATCAGCTACGAGGGCTT 1280
||||||||| | || |||||||||||||||||||||| ||||||| ||||||||||| ||
Sbjct 1274 ACTTGAAAGTACTCCTGACGAGAATATAATGGAAATCCTGAAAATTAGCTACGAGGGTTT 1333
Query 1281 ACCAAAACCACATCAGAATG-TATTCCTTCATGTTGTC-TGTCTCTTCAATGGAGACACT 1338
| ||||| |||||||||||| | ||| | ||||||| | |||||||| ||||||||||||
Sbjct 1334 AGCAAAAGCACATCAGAATGCTTTTC-TCCATGTTG-CATGTCTCTTTAATGGAGACACT 1391
Query 1339 CTCCAGCGTATCACTTCCCTTCTTCATGGCCCCATACCTC-AGAGTAGCCTGTGGATAAG 1397
||| |||| ||||||| || ||| ||| || | | | |||| | ||||||| ||
Sbjct 1392 TTCCGGCGTGTCACTTCACTACTTGATGTTAGCAGAA-TGGAAAGTAACTTGTGGATGAG 1450
Query 1398 AGTTTTAGCAGAGAAATCTCTCATCAAAATATCAACTAATGGATCTGTAATCATGCACAA 1457
||||||||||||||||||||||||||| ||| ||| |||||||| ||||| | |||| ||
Sbjct 1451 AGTTTTAGCAGAGAAATCTCTCATCAATATAACAAGTAATGGATATGTAACCCTGCATAA 1510
Query 1458 GTTGGTAGAACAAATGGGTAGAGAAATTATCCGCGACAATATGTCTTTGGCTCGAAAATT 1517
|||||| ||||||||||| ||||||||||| || | || | ||| ||||||
Sbjct 1511 GTTGGTTGAACAAATGGGAAGAGAAATTAT--GC-----T-TGCCAGTGG----AAAATT 1558
Query 1518 CCTCAGGGATCCT-ATGGA-AATTCGTGATGCCTTGGCTTTCAGAGACGCAGGAGAACAA 1575
| || ||||||| | | | ||||| |||| | | ||| || | | ||| |||
Sbjct 1559 CATCGGGGATCCGGA-G-ACAATTCATGATAC-T---CTTG--GA-ATG--GGA---CAA 1604
Query 1576 ACTGAATGCATGTGCCTACACACGTGTGAGTTGACCTGTGTGTTGTCCATGGAGGCCAGT 1635
|||||| |||| | |||||||| ||||| ||||||||| || || |||| | || ||
Sbjct 1605 ACTGAAAGCATCTCCCTACACATATGTGAAATGACCTGTGCATTTTCGATGGCGACCGGT 1664
Query 1636 GTTGTTGGCCGTATGCATAATCTCAAGTTTCTCAAGGTTTACAAGCATGT-AGATTACAG 1694
||| || || | ||| |||| || | |||| | ||||| ||||||||||| | | | ||
Sbjct 1665 GTTTTTAGCAGAATGTATAAACTTAGGTTTTTAAAGGTCTACAAGCATGTTA-ACGAGAG 1723
Query 1695 AGAGTCGAAGCTGCAACTCATTCCAGACCAACAGTTCC-TGCC-TCG-TAGCCTACGGCT 1751
||| |||| | |||| | ||||| || | | | || | || | | | || | ||
Sbjct 1724 AGAATCGATGTTGCAGGTGATTCCTGAAGATGAATACCCTTCCATAAATTGTCT-C--CT 1780
Query 1752 ATTCCATTGGGATGCATTTCCATTGAG-AGCCCTGCCT-TCCGGCTCTGATCCATGTTTT 1809
| |||||||||| |||||||||||||| | | ||| || || | | || ||| || |
Sbjct 1781 ACTCCATTGGGACGCATTTCCATTGAGCAAATTT-CCTCTCAGGTT-TAATACATATTGT 1838
Query 1810 CTTGTTGAACTCAATCTGCGTCACAGTGATTTAGAAACTCTCAGGACTTGTATGT--TGA 1867
|||||||||||||||||||||||||| | ||||||| ||| ||| | | | || |||
Sbjct 1839 CTTGTTGAACTCAATCTGCGTCACAGCAACCTAGAAACACTCTGGAGTGG-A-GTACTGA 1896
Query 1868 AGA--G-T--TT-GAAGAGACTAGATGTGACGGGATCTAAGTATCTCAAGCAACTTCCAG 1921
|| | | || || || |||||||||||||||||||||| ||||||| ||||||||||
Sbjct 1897 AGTTTGGTCATTTGAGGAAACTAGATGTGACGGGATCTAAGAATCTCAAACAACTTCCAG 1956
Query 1922 ATCTTTCAAGTATC-ACGAGTCTTGAGGAATTGCTTCTGGAACAATGCACGAGACTGGAT 1980
|||||||| || | | ||| ||||| || |||||||| |||||||||| |||||| |
Sbjct 1957 ATCTTTCATGTGCCGAGGAG-CTTGACGAGTTGCTTCTAGAACAATGCAAGAGACTAAAA 2015
Query 1981 GGCATTCCAGAGTGTATTGGAAAAAGGTCTACCCTAAAGAAG-CTTAAGCTATCCTAC 2037
|| |||||||||| |||| | | |||||||||||| | || ||||| ||||| |||
Sbjct 2016 GGAATTCCAGAGTCCATTGCAGAGAGGTCTACCCTAG-GCAGGCTTAATCTATCATAC 2072
Score = 165 bits (89), Expect = 2e-39
Identities = 149/177 (84%), Gaps = 8/177 (5%)
Strand=Plus/Plus
Query 2659 AGCAGCCATGATTTTGAGACATTGCCACCAAGCATCAGAGATCTTACCTCATTGGTAACA 2718
||||||||||| ||| ||| | ||||| |||||||||||||||||||||||||||||||
Sbjct 2790 AGCAGCCATGACTTTAAGAAACTGCCATCAAGCATCAGAGATCTTACCTCATTGGTAACT 2849
Query 2719 CTTTGCCTTAATAACTGCAAGAAACTCAAATCAGTGGAAAGAA-TCCCCAC-GT-CTCTC 2775
|| ||||| |||||||||||||||||||||||| ||||| ||| |||| || | | |||
Sbjct 2850 CTCTGCCTGAATAACTGCAAGAAACTCAAATCACTGGAA-GAACTCCC-ACTGAGC-CTC 2906
Query 2776 CAATTTCTGGATGCACACGGCTGTGATTCCCTCGAAGCTGGTTG-TGTAGAACATTT 2831
|| ||||| || ||| | || |||||||| || ||||||| | | | ||||||||||
Sbjct 2907 CAGTTTCTCGACGCAAAGGGTTGTGATTCTCTTGAAGCTGAT-GATTTAGAACATTT 2962
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 143728291695
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5