BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg471984
Length=2440
Score E
Sequences producing significant alignments: (Bits) Value
AT1G17720.1 | Symbols: ATB BETA | Protein phosphatase 2A, regul... 3374 0.0
AT1G51690.3 | Symbols: B ALPHA | protein phosphatase 2A 55 kDa ... 684 0.0
> AT1G17720.1 | Symbols: ATB BETA | Protein phosphatase 2A, regulatory
subunit PR55 | chr1:6093208-6098383 REVERSE LENGTH=2565
Length=2565
Score = 3374 bits (1827), Expect = 0.0
Identities = 2315/2525 (92%), Gaps = 136/2525 (5%)
Strand=Plus/Plus
Query 1 TTTTTCTTCTCTCGTTCCTCCATTTTCTTCAGAGAGATATATC-AAAATTCCATTTTCTA 59
|||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||
Sbjct 16 TTTTTCTTCTCTCGTTCCTCCATTTTCTACAGAGAGATATATCAAAAATTCCATTTTCTA 75
Query 60 C------------agagagagagagagag-GA---ACGAAAT-TTAATCATCGATCAA-- 100
| |||||||||||||||| || ||||||| |||||||||||||||
Sbjct 76 CAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGGGACGAAATATTAATCATCGATCAAGT 135
Query 101 -G--T---T-GCG-AAAAATCCATGAATAAAACTATGGAATGGAATGTGAATCAATGGAT 152
| | | ||| ||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 136 TGCTTCAATCGCGAAAAAATCCATGAATAAAACTATGGAATGGAATGTGAATCAAAGGAT 195
Query 153 TTGGTGATGGTGATGACCGCGATCTTCGATTCGATTTGGTGATTAAAAGATTTGGAAGCT 212
||||| |||||||||| ||||||||||||||||||| |||||||||||||||||||||||
Sbjct 196 TTGGTTATGGTGATGA-CGCGATCTTCGATTCGATTCGGTGATTAAAAGATTTGGAAGCT 254
Query 213 CAGATTTCAAGCTCGGATTTCTAATTTTTGTTGGATTATCTAACCCAAAA-CC--AAAAA 269
||||| |||||||||||||||||||||||||||||||||||||||||||| || |||||
Sbjct 255 CAGATCTCAAGCTCGGATTTCTAATTTTTGTTGGATTATCTAACCCAAAAGCCAAAAAAA 314
Query 270 GAAAATGAACGGTGGTGACGATGCCTCTTCCTCCGCCGCTACTAGTGGTCCTCCTCCGTC 329
|||||||||||||||||||| | ||||||||||||||||||||||||||
Sbjct 315 AAAAATGAACGGTGGTGACGA----------T--GCCGCTACTAGTGGTCCTCCTCCGTC 362
Query 330 TTTAGAGTGGAGATTCTCTCAGGTCTTCGGCGAGCGAACCGCCGGAGAAGAAGTTCAGGA 389
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 363 TTTAGAGTGGAGATTCTCTCAGGTCTTCGGTGAGCGAACCGCCGGAGAAGAAGTTCAGGA 422
Query 390 AGTTGACATCATTTCAGCCATCGAATTTGATAAAAGTGGAGACCATCTTGCAACTGGTGA 449
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 423 AGTTGACATCATTTCAGCCATCGAATTTGATAAAAGTGGAGACCATCTCGCAACTGGTGA 482
Query 450 CCGTGGGGGCCGAGTAGTTCTTTTCGAAAGGACAGATACTAAAGATCATGGAGGGTCCAG 509
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 483 CCGTGGGGGCCGAGTAGTTCTTTTTGAAAGGACAGATACTAAAGATCATGGAGGGTCCAG 542
Query 510 GAAGGATCTTGAGGAGACGGATTACCCAGTTAGGCATCCTGAGTTTAGATATAAAACAGA 569
||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 543 GAAGGATCTTGAGCAGACGGATTACCCAGTTAGGCATCCTGAGTTTCGATATAAAACAGA 602
Query 570 GTTTCAGAGTCATGAGCCAGAGTTTGACTATCTCAAGAGTTTGGAGATAGAGGAGAAAAT 629
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 603 ATTTCAGAGTCATGAACCAGAGTTTGACTATCTCAAGAGTTTGGAGATAGAGGAGAAAAT 662
Query 630 CAACAAAATCAGATGGTGTCAGCCAGCAAATGGTGCATTGTTTCTGCTTTCCACAAACGA 689
||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||
Sbjct 663 CAACAAAATCAGATGGTGTCAGCCAGCTAATGGTGCATTGTTTCTGCTTTCTACAAACGA 722
Query 690 TAAAACCATCAAATATTGGAAGGTACAAGAGAAGAAGATCAAGAAAATTAGTGAAATGAA 749
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 723 TAAAACCATCAAATATTGGAAGGTACAAGAGAAGAAGATCAAGAAAATTAGTGAAATGAA 782
Query 750 TATTGATCCGTCGAGAGAAGGAAGTTCAAGTATCCCTCCTCAATTAGTTACTAATGGATT 809
|||||||||||| || | |||||||| ||||||||||||||||||||||||||||||
Sbjct 783 TATTGATCCGTC---AG-A--AAGTTCAAATATCCCTCCTCAATTAGTTACTAATGGATT 836
Query 810 ACCTGCCGATAAAGCACATAG-CTACCTGAGCAATGAATATTCTTTCCCGCCAGGAGGCA 868
|||||| ||||||| ||| | |||||||||||| || | ||||||||||||||||||||
Sbjct 837 ACCTGCTGATAAAGGGCAT-GACTACCTGAGCAAGGACTTTTCTTTCCCGCCAGGAGGCA 895
Query 869 TTCCATCTCTGCGTTTACCTGT-G--GTTACAAGCCAGGAGACCAACCTTGTGGCTAGAT 925
|||||||||||||||| ||||| | ||||| ||||||||||| ||||||||||||||||
Sbjct 896 TTCCATCTCTGCGTTTGCCTGTGGTAGTTACCAGCCAGGAGACTAACCTTGTGGCTAGAT 955
Query 926 GCCGAAGAGTATATGCTCATGCTCATGATTACCATATTAATTCAATCTCAAATAGCAGCG 985
|||||||||| ||||| |||||||||||||||||||||||||||||||| |||||||| |
Sbjct 956 GCCGAAGAGTGTATGCCCATGCTCATGATTACCATATTAATTCAATCTCCAATAGCAGTG 1015
Query 986 ATGGAGAAACCTTTATTTCGGCTGATGATCTGCGAGTAAATCTCTGGAATTTGGAAATTA 1045
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1016 ACGGAGAAACCTTTATTTCGGCTGATGATCTGCGAGTAAATCTCTGGAATTTGGAAATTA 1075
Query 1046 GCAACCAGAGTTTCAATATTGTTGATGTTAAGCCCACAAACATGGAGGACTTAACTGAGG 1105
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1076 GCAACCAGAGTTTCAATATTGTTGATGTTAAGCCCACAAACATGGAGGACTTAACTGAGG 1135
Query 1106 TTATTACATCAGCTGAGTTTCATCCTATCCATTGTAATATGCTCGCATATAGTAGTTCAA 1165
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1136 TTATTACATCAGCTGAGTTTCATCCTATCCATTGTAATATGCTCGCATATAGTAGTTCAA 1195
Query 1166 AAGGCTCAATTCGTTTGATTGATATGCGTCAATCAGCTCTGTGTGATTCTCATACAAAAT 1225
||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 1196 AAGGCTCCATTCGTTTGATTGATATGCGTCAATCAGCTCTGTGTGATTCTCATACGAAAT 1255
Query 1226 TATTTGAAGAACCGGAAGCACCTGGTTCAAGATCATTTTTCACAGAGATAATTGCCTCAA 1285
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1256 TATTTGAAGAACCGGAAGCACCTGGTTCAAGATCATTTTTCACAGAGATAATTGCCTCAA 1315
Query 1286 TTTCAGATATTAAATTCTCAAAGGATGGGAGATACATACTTAGTCGCGATTACATGACGC 1345
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1316 TTTCAGATATTAAATTCTCAAAGGATGGGAGATACATACTTAGTCGCGATTACATGACGC 1375
Query 1346 TCAAGCTGTGGGACATAAACATGGATTCTGGTCCAGTTGCATCTTACCAGGTTCATGAGC 1405
|||||||||||||||||||||||||||||||||| || |||||||||||||||||||| |
Sbjct 1376 TCAAGCTGTGGGACATAAACATGGATTCTGGTCCGGTCGCATCTTACCAGGTTCATGAAC 1435
Query 1406 ATCTGAGACCCAGGCTATGCGATCTATATGAAAATGACTCCATCTTTGATAAATTTGAGT 1465
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1436 ATCTGAGACCCAGGCTATGCGATCTATATGAAAATGACTCCATCTTTGATAAATTTGAGT 1495
Query 1466 GTTGTCTGAGTGGCGATGGATTGAGGGTAGCAACAGGTTCTTACAGCAATCTATTCCGCG 1525
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1496 GTTGTCTGAGTGGCGATGGATTGAGGGTAGCAACAGGTTCTTACAGCAATCTATTCCGCG 1555
Query 1526 TATTTGGAGCGTCTCAAGGTAGTACCGAAGCTGCAACTTTGGAAGCTAGCAAAAACCCGA 1585
||||||||||||||||||| ||||| |||||||| |||||||||||||||||||||||||
Sbjct 1556 TATTTGGAGCGTCTCAAGGAAGTACTGAAGCTGCGACTTTGGAAGCTAGCAAAAACCCGA 1615
Query 1586 TGAGGAGGCAAATCCAGACACCTGCAAGACCTTCCAGATCTATAGGCAGTATGACACGTG 1645
||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |
Sbjct 1616 TGAGGAGGCAAATCCAGACACCTGCAAGACCATCCAGATCTATAGGCAGTATGACACGCG 1675
Query 1646 TGGTTAGACGAGGATCAGAGAGTCCCGGAACAGAGGCAAATGGGAACGCATATGATTTCA 1705
||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||
Sbjct 1676 TGGTTAGACGAGGATCAGAGAGTCCCGGAACAGAGGCAAATGGGAACGCCTACGATTTCA 1735
Query 1706 CAACTAAGTTGCTGCATATGGCATGGCACCCAACAGAGAACTCAATTGCTTGTGCAGCAG 1765
|||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 1736 CAACAAAGTTGCTGCATATGGCTTGGCACCCAACAGAGAACTCAATTGCTTGTGCAGCAG 1795
Query 1766 CAAACAGCTTGTACATGTACTATGCATGAATTGgagagagagagagagagaAGACA-AAC 1824
||||||||||||||||||||||||||||| |||| || ||||||||||| | |||| ||
Sbjct 1796 CAAACAGCTTGTACATGTACTATGCATGAGTTGG-GA-AGAGAGAGAGA-A-GACATAA- 1850
Query 1825 ACATGGAACCAGCTTGCTCCAATTTAACTTT---T--C--CA------GGctctctctct 1871
|||||||| |||||||||||||||||||||| | | | || |||||||||
Sbjct 1851 ACATGGAATCAGCTTGCTCCAATTTAACTTTCCCTTTCTTCTTTTCCCGGGTCTCTCTCT 1910
Query 1872 c--tctcattctct-TT-CTTTTTAACAACCAAAGTCATGATGTAACCAGAAAAGGTGTA 1927
| |||| |||||| || ||||| ||||||||||||||||||||||||||||||||||||
Sbjct 1911 CACTCTCTTTCTCTCTTTCTTTT-AACAACCAAAGTCATGATGTAACCAGAAAAGGTGTA 1969
Query 1928 GTAGTAACATTGTTATGCTGTGTCCAAGACCAAAGGCTGACCAGTCATACCGCGACGAGT 1987
||||||||| || |||||||| |||||||||||| ||||||||||| |||||||||||
Sbjct 1970 GTAGTAACAGAGTAATGCTGTGACCAAGACCAAAGCCTGACCAGTCA--CCGCGACGAGT 2027
Query 1988 CAACAGAAGAAGCA--A-CAGTAATCTTTCAGGAGTTAG-AAGGTAAAAAAGTATTGGGT 2043
|||| ||||||||| | ||||||||||||||||||||| |||||||||| || ||||||
Sbjct 2028 CAACGGAAGAAGCAGCAACAGTAATCTTTCAGGAGTTAGTAAGGTAAAAA-GTGTTGGGT 2086
Query 2044 TGGGAAATTTACCA-GAAGAAGGG-TT--GTCt---t---------t--t-t-ttGAAAT 2083
||||||| | || ||||| || || || | | | | | || ||||
Sbjct 2087 TGGGAAAGAAAACAAGAAGA-GGCCTTTTGTTTACCTGAAGAAGGGTAATGTCTT-AAAT 2144
Query 2084 ATCCGAACCACCCCTCCTACTTAGGTTGTCttttttt-GGGTTGC---AC-AAGGATACa 2138
||||||||||||||||||||||||||||||||||||| ||||||| || ||||||| |
Sbjct 2145 ATCCGAACCACCCCTCCTACTTAGGTTGTCTTTTTTTTGGGTTGCTGCACTAAGGATAAA 2204
Query 2139 ttttattttattttcttattagtttcgattctattac-tttcttttctttc--ttaAGAA 2195
|||||||||||||| || | ||| ||||||||||||| ||| |||| |||| |||||||
Sbjct 2205 TTTTATTTTATTTT-TT-T-AGTATCGATTCTATTACCTTT-TTTT-TTTCAATTAAGAA 2259
Query 2196 ACAGATTATGGTGTGTGCGAtttttttAGTATGAGACGATTGGGAGGGATGTGCTTCAAA 2255
||| ||||||||||||| |||||||| |||||||||||||||||||||||||||||||||
Sbjct 2260 ACAAATTATGGTGTGTGGGATTTTTT-AGTATGAGACGATTGGGAGGGATGTGCTTCAAA 2318
Query 2256 ATTTGTTTATTGATTCTTTTGTCATAtcttcttcttcttcttcttcttGAACACCACATA 2315
|||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 2319 ATTTGTTTATTGATTCTTTTGTCATATCTTCTTCTTCTTCTT------GAACACCACATC 2372
Query 2316 CATACGTGTGGCtttttttttGCTATTTGTCTATTTTTCAATTGTATTGTCAGACACCTC 2375
||| | ||| |||||| ||||||||||||||||||||||||||| |||||||||||
Sbjct 2373 CATTC-TGT---TTTTTT---GCTATTTGTCTATTTTTCAATTGTATTTTCAGACACCTC 2425
Query 2376 TTCTGTGTTTTCTTACTTTTACCCACAATAAAAAGTAGTTTTCTCCTCAATTCCTCATGG 2435
|| |||||||| |||||||||||||||||||||||||| ||||||||| ||||||| | |
Sbjct 2426 TTTTGTGTTTT-TTACTTTTACCCACAATAAAAAGTAGCTTTCTCCTCCATTCCTCGTAG 2484
Query 2436 ATTCT 2440
|||||
Sbjct 2485 ATTCT 2489
> AT1G51690.3 | Symbols: B ALPHA | protein phosphatase 2A 55 kDa
regulatory subunit B alpha isoform | chr1:19164075-19170449
FORWARD LENGTH=2336
Length=2336
Score = 684 bits (370), Expect = 0.0
Identities = 762/949 (80%), Gaps = 36/949 (4%)
Strand=Plus/Plus
Query 860 CAGGAGGCATTC-CATCTCTGCGTTTACCTGTGGTTACAAGCCAGGAGACCAACCTTGTG 918
||||||||| || | || ||||| ||||| ||||| || ||||| ||| | | || ||||
Sbjct 927 CAGGAGGCA-TCTCTTCGCTGCGATTACCAGTGGTAACTAGCCATGAGTCGAGCCCTGTG 985
Query 919 GCTAGATGCCGAAGAGTATATGCTCATGCTCATGATTACCATATTAATTCAATCTCAAAT 978
|||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 986 GCTAGATGTCGAAGAGTATATGCTCATGCTCATGATTATCATATTAATTCAATCTCAAAT 1045
Query 979 AGCAGCGATGGAGAAACCTTTATTTCGGCTGATGATCTGCGAGTAAATCTCTGGAATTTG 1038
| |||||| || ||||| |||||||| ||||||||| ||||| | ||||| |||||| ||
Sbjct 1046 AACAGCGACGGCGAAACATTTATTTCTGCTGATGATTTGCGAATTAATCTTTGGAATCTG 1105
Query 1039 GAAATTAGCAACCAGAGTTTCAATATTGTTGATGTTAAGCCCAC-AAACATGGAGGA-CT 1096
||||||||||| || |||||||||||||||||||| ||||| | ||| ||||| || ||
Sbjct 1106 GAAATTAGCAATCAAAGTTTCAATATTGTTGATGTCAAGCCTGCGAAA-ATGGAAGATCT 1164
Query 1097 TAACTGAGGTTATTACATCAGCTGAGTTTCATCCTATCCATTGTAATATGCTCGCATATA 1156
| |||||||||| |||||||| || |||||||||| |||||| |||||| | || ||||
Sbjct 1165 -ATCTGAGGTTATCACATCAGCAGAATTTCATCCTACCCATTGCAATATGTTAGCCTATA 1223
Query 1157 GTAGTTCAAAAGGCTCAATTCGTTTGATTGATATGCGTCAATCAGCTCTGTGTGATTCTC 1216
| ||||| ||||| |||||||| |||||||| |||| || |||||| | |||||||| |
Sbjct 1224 GCAGTTCGAAAGGTTCAATTCGCCTGATTGATCTGCGCCAGTCAGCTTTATGTGATTCAC 1283
Query 1217 ATACAAAATTATTTGAAGAACCGGAAGCAC-CTGGTTC-AAGATCATT-TTTCACAGAGA 1273
|| ||||||| ||||| ||||| || ||| | ||| | || ||| || ||| || ||||
Sbjct 1284 ATTCAAAATTGTTTGAGGAACCAGA-GCAAGCAGGTCCTAA-ATCGTTCTTT-ACTGAGA 1340
Query 1274 TAATTGCCTCAATTTCAGATATTAAATTCT-CAAAGGATGGGAGATA-CATACTTAGTCG 1331
||||||| ||| | ||||| || ||||| | |||| || || ||||| | ||||||| ||
Sbjct 1341 TAATTGCTTCAGTCTCAGACATCAAATT-TGCAAAAGAAGGAAGATATC-TACTTAGCCG 1398
Query 1332 CGATTACATGACGCTCAAGCTGTGGGACATAAACATGGATTCTGGTCCAGTTGCATCTTA 1391
|| || ||||| || ||| | |||||||| |||||||| | |||||||| ||| |||
Sbjct 1399 TGACTATATGACACTTAAGTTATGGGACATCAACATGGACGCAGGTCCAGTAGCAACTTT 1458
Query 1392 CCAGGTTCATGAGCATCTGAGACCCAGGCTATGCGATCTATATGAAAATGACTCCATCTT 1451
|||||||||||| || ||| ||| | ||| || ||| ||||||||||||| ||||||||
Sbjct 1459 CCAGGTTCATGAATATTTGAAACCAAAGCTCTGTGATTTATATGAAAATGATTCCATCTT 1518
Query 1452 TGATAAATTTGAGTGTTGTCTGAGTGGCGATGGATTGAGGGTAGCAACAGGTTCTTACAG 1511
||| || || ||||||||| | |||||| |||| ||| | | ||| ||||||||||||||
Sbjct 1519 TGACAAGTTCGAGTGTTGTATAAGTGGCAATGGCTTGCGAGCAGCTACAGGTTCTTACAG 1578
Query 1512 CAATCTATTCCGCGTATTTGGAGC-GTCTCAAGGTAGTACCGA-AGCTGCAACTTTGGAA 1569
|||||| ||||| || ||||| | | | | || ||||| || | | ||||| || |||
Sbjct 1579 CAATCTGTTCCGTGTGTTTGGTGTTGCCCCC-GGAAGTACTGAGA-CGGCAACCTTAGAA 1636
Query 1570 GCTAGCAAAAACCCGATGAGGAGGCAAATCC-AGACACC-TGCAAGACCTTCCAGATCTA 1627
|| |||| |||||| |||||||| || ||| | | || | | || || |||||| | |
Sbjct 1637 GCAAGCAGAAACCCAATGAGGAGACATGTCCCA-ATTCCGT-CGAGGCCATCCAGAGC-A 1693
Query 1628 -TAGGCAGTATGACACGTGTGGTTAG-ACGAGGATCAGAGAGTCCCGGAA-CAGA-GGCA 1683
|| ||||||| || ||||| || || | |||||||||||||||| ||| | || || |
Sbjct 1694 CTAAGCAGTATAACGCGTGTCGTAAGTA-GAGGATCAGAGAGTCCGGGAGTC-GATGGGA 1751
Query 1684 AATGGGAACGCATAT-GATTTCACAACTAAGTTGCTGCATATGGCATGGCACCCAA-CAG 1741
| | || || | | |||| |||||| ||| |||||||| | || ||||| |||| | |
Sbjct 1752 A-TACTAATGC-TCTTGATTACACAACAAAGCTGCTGCATCTTGCTTGGCATCCAAAC-G 1808
Query 1742 AGAACTCAATTGCTTGTGCAGCAGCAAACAGCTTGTACATGTACTATGC 1790
|||||||||||||||| || || ||||| ||||||||||||||||||||
Sbjct 1809 AGAACTCAATTGCTTGCGCCGCTGCAAATAGCTTGTACATGTACTATGC 1857
Score = 381 bits (206), Expect = 2e-104
Identities = 357/429 (83%), Gaps = 14/429 (3%)
Strand=Plus/Plus
Query 329 CTTTAGAGTGGAGATTCTCTCAGGTCTTCGGCGAGCGAACCGCCGGAGAAGAAGTTCAGG 388
|||| || ||||||||||||||||||||||| || |||| ||| || ||||||||||| |
Sbjct 372 CTTTGGAATGGAGATTCTCTCAGGTCTTCGGTGAACGAAGCGCTGGTGAAGAAGTTCAAG 431
Query 389 AAGTTGACATCATTTCAGCCATCGAATTTGATAAAAGTGGAGACCATCTTGCAACTGGTG 448
||||||| || || ||||| || ||||||||||| |||| |||||||||| ||||| |
Sbjct 432 AAGTTGATATAATCTCAGCGATTGAATTTGATAATTCTGGAAACCATCTTGCTACTGGGG 491
Query 449 ACCGTGGGGGCCGAGTAGTTCTTTTCGAAAGGACAGATACTAA-AGATCATGGAG-GG-T 505
||||||| || || || ||||||||||| || || ||||| || | || | | || ||
Sbjct 492 ACCGTGGAGGACGTGTTGTTCTTTTCGAGAGAACCGATACCAATA-AT-A-GCAGTGGAA 548
Query 506 CCAGGAAG-GATCTTG-AGGAGACGGATTACCCAGTTAGGCATCCTGAGTTTAGATATAA 563
||| |||| || |||| || || | ||||| ||| | |||||||| |||||| | |||||
Sbjct 549 CCA-GAAGAGAGCTTGAAGAAG-CTGATTATCCACTGAGGCATCCAGAGTTTCGTTATAA 606
Query 564 AACAGAGTTTCAGAGTCATGAGCCAGAGTTTGACTATCTCAAGAGTTTGGAGATAGAGGA 623
||||||||||||||||||||| || |||||||| || |||||||||||||||||||||||
Sbjct 607 AACAGAGTTTCAGAGTCATGACCCTGAGTTTGATTACCTCAAGAGTTTGGAGATAGAGGA 666
Query 624 GAAAATCAACAAAATCAGATGGTGTCAGCCAGCAAATGGTGCA-TTGTTTCTGCTTTCCA 682
|||||| |||||||| ||||||||||| |||||||||| || || ||||| || || |
Sbjct 667 GAAAATTAACAAAATTAGATGGTGTCAAACAGCAAATGGAGCTCTT-TTTCTCCTCTCGA 725
Query 683 CAAACGATAAAACCATCAAATATTGGAAGGTACAAGAGAAGAAGATCAAGAAAAT-TAGT 741
| || |||||||||||||| | ||||||||| ||||| ||||||||||||||||| | ||
Sbjct 726 CCAATGATAAAACCATCAAGTTTTGGAAGGTTCAAGACAAGAAGATCAAGAAAATCT-GT 784
Query 742 GAAATGAAT 750
|| ||||||
Sbjct 785 GATATGAAT 793
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 121184115630
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5