BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg472014
Length=1628
Score E
Sequences producing significant alignments: (Bits) Value
AT1G18000.1 | Symbols: | Major facilitator superfamily protein... 2409 0.0
AT1G18010.1 | Symbols: | Major facilitator superfamily protein... 2313 0.0
> AT1G18000.1 | Symbols: | Major facilitator superfamily protein
| chr1:6194543-6196229 REVERSE LENGTH=1687
Length=1687
Score = 2409 bits (1304), Expect = 0.0
Identities = 1506/1602 (94%), Gaps = 19/1602 (1%)
Strand=Plus/Plus
Query 1 TGTTTTGTTAGAAAATTAATTTTTA-ATAATCATTTCTTCCCATGAAAATGTCCG---CT 56
||||||||||||||||||| ||||| |||| |||| |||||||||||||||||| ||
Sbjct 13 TGTTTTGTTAGAAAATTAAGTTTTAGTTAAT-ATTTATTCCCATGAAAATGTCCGCTACT 71
Query 57 ACTAAAGGAAGAATCGTAACAGACGGATCAC--A-A-TCAAAGATCCGTGCCCTGCTTTG 112
||||||| ||||||||||||||||||||||| | | ||| ||||||| |||||| ||||
Sbjct 72 ACTAAAGAAAGAATCGTAACAGACGGATCACAAACAGTCACAGATCCGAGCCCTGTTTTG 131
Query 113 AGTTTACGAGAAGGAA-ATTAAAATTCTCATCTTTCACCtttttttCCGATCATGAATGG 171
|||||||||||| ||| |||||||||||||||||| ||| |||| ||||||||||||||
Sbjct 132 AGTTTACGAGAA-GAATATTAAAATTCTCATCTTTAACCATTTTATCCGATCATGAATGT 190
Query 172 GAAAAACGA-GGAAATAAGTCCGGCGGAGAATCACGGCGGAGGAGAAGATATTAAACCCC 230
|| | |||| ||||| || | |||||||||| |||||||||||||| || | |||| | |
Sbjct 191 GAGAGACGAGGGAAA-AACTACGGCGGAGAAACACGGCGGAGGAGAGGAGAATAAATCAC 249
Query 231 CGGAAAATAAAAAATGGCGATTTAATTCTCCTTTTGTTCAAGTGAGCTTAATGGGATTCG 290
||| | || ||||||||||||||||||||| | | |||||||||||||||||||||||
Sbjct 250 CGG---AGAACAAATGGCGATTTAATTCTCCTCTAGCTCAAGTGAGCTTAATGGGATTCG 306
Query 291 TCTGTTTCTGTTGTCCAGGAATGTTCAACGCTCTCTCCGGCATGGGAGGCGGTGGTCAAG 350
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 307 TTTGTTTCTGTTGTCCAGGAATGTTCAACGCTCTCTCCGGCATGGGAGGCGGTGGTCAAG 366
Query 351 TAGATCCCACCGCCGCTAACAACGCTAACACCGCCGTTTACACCGCTTTCACCGTTTTCG 410
||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 367 TAGATCCAACCGCTGCTAACAACGCTAACACCGCCGTTTACACCGCTTTCACCGTTTTCG 426
Query 411 GCCTTTTAGGCGGCGCGTTTTACAACGTCCTCGGTCCACGGCTCACGTTAGCCGCTGGAT 470
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 427 GCCTTTTAGGCGGCGGGTTTTACAACGTCCTCGGTCCACGGCTCACGTTAGCCGCTGGAT 486
Query 471 GTTCGACTTACGTACTCTACGCCGGATCTTTCCTCTACTACAACCATCACCACCACCAAG 530
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 487 GTTCGACTTACGTACTCTACGCCGGATCTTTCCTCTACTACAACCATCACCACCACCAAG 546
Query 531 CCTTCGCGATAGTCGCCGGAGCTTTACTCGGTTGCGGCGCGGGACTTCTCTGGGCTGGAG 590
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 547 CCTTCGCGATAGTCGCCGGAGCTTTACTCGGTTGCGGCGCGGGACTTCTCTGGGCCGGAG 606
Query 591 AAGGAGCTGTGATGACGTCATATCCACCGCCGCATCGGAAAGGTACTTACATCGCTTTGT 650
|||||||||||||||||||||| || ||||||||||||||||| |||||||| || ||||
Sbjct 607 AAGGAGCTGTGATGACGTCATACCCTCCGCCGCATCGGAAAGGCACTTACATAGCGTTGT 666
Query 651 TCTGGAGTATCTTCAATCTAGGCGGCGTAATCGGTGGATTAATCCCGTTTATCCTAAATT 710
||||||||||||||||||| |||||||| |||||||||||||||||||||||||| || |
Sbjct 667 TCTGGAGTATCTTCAATCTCGGCGGCGTTATCGGTGGATTAATCCCGTTTATCCTCAACT 726
Query 711 ACCACCGTAGCTCCGCCGCATCGGTCAACGACTCGACGTATATCGCGTTCATGTGTTTCA 770
|||| ||||||||||||||||||||||||||||||||||| || ||||||||||||||||
Sbjct 727 ACCAACGTAGCTCCGCCGCATCGGTCAACGACTCGACGTACATAGCGTTCATGTGTTTCA 786
Query 771 TGTTCGCCGGCGTTCTCCTCTCTTTCGGAATCCTTCCGGCGACCTCCGTAATCCGCAACG 830
|||||||||||||||| ||||||||||| ||||| |||||||||||||| ||||| ||||
Sbjct 787 TGTTCGCCGGCGTTCTTCTCTCTTTCGGTATCCTCCCGGCGACCTCCGTGATCCGTAACG 846
Query 831 ACGGATCTAGATGCTCTGCCGTGAAATACTCCCGTCCGTCAACAGAAGCAGCGGCCGTGC 890
||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||
Sbjct 847 ACGGATCTAGATGCTCTGCCGTGAAATACTCCCGTCCGTCAACTGAAGCAGCCGCCGTGC 906
Query 891 TACGGCTATTCCTCGATCGGAAAATGCTCCTCATTGTCCCCGCGGCTTGGGCTAGCAACT 950
|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
Sbjct 907 TACGGCTATTCCTCGATCGGAAAATGCTCCTCATCGTCCCCGCGGCTTGGGCTAGCAATT 966
Query 951 TCTTCTATAGCTATCAATTCAACAATGTGAATGGAATTCTCTTTAACTTAAGAACCAGAG 1010
||||||| ||||||||||||||||||||||||||| | ||||||||||||||||||||||
Sbjct 967 TCTTCTACAGCTATCAATTCAACAATGTGAATGGACTCCTCTTTAACTTAAGAACCAGAG 1026
Query 1011 GATTCAACAACGTTTTCTACTGGGGAGCTCAAATGGCTGGATCCATTGCCATTGGTTACG 1070
|||||||||| || |||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 1027 GATTCAACAATGTCTTCTACTGGGGAGCTCAAATGGCTGGATCCATCGCCATTGGTTACG 1086
Query 1071 TGATGGACTTCAGCTTCAAAAGCCGGAGAGCGAGAGGATTTGCCGGAATATCATTAGTTG 1130
|||||||||||||||||||||||||| |||| |||||||| ||||||||||| |||| |
Sbjct 1087 TGATGGACTTCAGCTTCAAAAGCCGGCGAGCTAGAGGATTCACCGGAATATCACTAGTCG 1146
Query 1131 CGGTAATCGGAACCATTATTTGGGCGGGAGGGTTAGCGAATCAGCACGGTTACTCGTTGA 1190
||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||
Sbjct 1147 CGGTAATCGGAACCATTATATGGGCGGGCGGGTTAGCGAATCAGCACGGTTACTCGTTGG 1206
Query 1191 ACAATCTACCGGGAAAGAAACTTGATTTCAAAGATTCCGGGATAGAATTTGCGGGACCTT 1250
|||| ||||||| ||||||||||||||| ||||||||||||||||| ||||||||||| |
Sbjct 1207 ACAAACTACCGGAAAAGAAACTTGATTTTAAAGATTCCGGGATAGAGTTTGCGGGACCAT 1266
Query 1251 TCGTGTTATACATGAGCTATGGATTGTTAGATGCAATGTATCAGAGTATGGTGTATTGGT 1310
|||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 1267 TCGTGTTATATATGAGCTATGGATTGTTAGATGCAATGTATCAGAGTATGGTTTATTGGT 1326
Query 1311 TGATAGGAGCATTGGCTGATGATTCACAGACTTTGAGTAGATATAGTGGATTCTACAAAG 1370
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 1327 TGATAGGAGCATTGGCTGATGATTCGCAGACTTTGAGTAGATATAGTGGATTCTACAAAG 1386
Query 1371 GAGTGCAGAGTGCAGGAGCTGCAGTGGCTTGGCAAGTGGATACTCGTAAGGTTCCGTTAA 1430
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1387 GAGTGCAGAGTGCAGGAGCTGCAGTGGCTTGGCAAGTGGATACTCGTAAGGTTCCGTTAA 1446
Query 1431 TGTCACAGCTTATTGTTAATTGGTCACTTACTACTGTAAGTTATCCTTTACTGGTTCTTC 1490
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 1447 TGTCACAGCTTATTGTTAATTGGTCACTTACTACTGTAAGTTATCCTTTACTTGTTCTTC 1506
Query 1491 TTGTGTATTTTTATGTTAAAAATGATAATGATGATGATAGTAATGATAAGGTTTAGA--- 1547
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1507 TTGTGTATTTTTATGTTAAAAATGATAATGATGATGATAGTAATGATAAGGTTTAGAAGA 1566
Query 1548 TAGTAGTTTATTAGAACATTGAGTAAGTTTACTGTTTTTTAA 1589
||||||||||||||||||||||||||||| ||||||||||||
Sbjct 1567 TAGTAGTTTATTAGAACATTGAGTAAGTTAACTGTTTTTTAA 1608
Score = 73.1 bits (39), Expect = 8e-12
Identities = 41/42 (98%), Gaps = 0/42 (0%)
Strand=Plus/Plus
Query 1587 TAACAGTTACATAGAGAAACAAAGATTTGAGGCTGTGAAATG 1628
|||||||||||||||||||||||||||||||||| |||||||
Sbjct 1633 TAACAGTTACATAGAGAAACAAAGATTTGAGGCTCTGAAATG 1674
> AT1G18010.1 | Symbols: | Major facilitator superfamily protein
| chr1:6199898-6201484 FORWARD LENGTH=1587
Length=1587
Score = 2313 bits (1252), Expect = 0.0
Identities = 1425/1509 (94%), Gaps = 10/1509 (1%)
Strand=Plus/Plus
Query 86 ACAATCAAAGATCCGTGCCCTGCTTTGAGTTTACGAGAAGGAA-ATTAAAATTCTCATCT 144
||| ||| ||||||| |||||| |||||||||||||||| ||| ||||||||||||||||
Sbjct 5 ACAGTCACAGATCCGAGCCCTGTTTTGAGTTTACGAGAA-GAATATTAAAATTCTCATCT 63
Query 145 TTCACCtttttttCCGATCATGAATGGGAAAAACGA-GGAAATAAGTCCGGCGGAGAATC 203
|| ||| |||| |||||||||||||| || | |||| ||||| || | |||||||||| |
Sbjct 64 TTAACCATTTTATCCGATCATGAATGTGAGAGACGAGGGAAA-AACTACGGCGGAGAAAC 122
Query 204 ACGGCGGAGGAGAAGATATTAAACCCCCGGAAAATAAAAAATGGCGATTTAATTCTCCTT 263
||||||||||||| || | |||| | |||| | || |||||||||||||||||||||
Sbjct 123 ACGGCGGAGGAGAGGAGAATAAATCACCGG---AGAACAAATGGCGATTTAATTCTCCTC 179
Query 264 TTGTTCAAGTGAGCTTAATGGGATTCGTCTGTTTCTGTTGTCCAGGAATGTTCAACGCTC 323
| | |||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 180 TAGCTCAAGTGAGCTTAATGGGATTCGTTTGTTTCTGTTGTCCAGGAATGTTCAACGCTC 239
Query 324 TCTCCGGCATGGGAGGCGGTGGTCAAGTAGATCCCACCGCCGCTAACAACGCTAACACCG 383
|||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||
Sbjct 240 TCTCCGGCATGGGAGGCGGTGGTCAAGTAGATCCAACCGCTGCTAACAACGCTAACACCG 299
Query 384 CCGTTTACACCGCTTTCACCGTTTTCGGCCTTTTAGGCGGCGCGTTTTACAACGTCCTCG 443
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 300 CCGTTTACACCGCTTTCACCGTTTTCGGCCTTTTAGGCGGCGGGTTTTACAACGTCCTCG 359
Query 444 GTCCACGGCTCACGTTAGCCGCTGGATGTTCGACTTACGTACTCTACGCCGGATCTTTCC 503
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 360 GTCCACGGCTCACGTTAGCCGCTGGATGTTCGACTTACGTACTCTACGCCGGATCTTTCC 419
Query 504 TCTACTACAACCATCACCACCACCAAGCCTTCGCGATAGTCGCCGGAGCTTTACTCGGTT 563
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 420 TCTACTACAACCATCACCACCACCAAGCCTTCGCGATAGTCGCCGGAGCTTTACTCGGTT 479
Query 564 GCGGCGCGGGACTTCTCTGGGCTGGAGAAGGAGCTGTGATGACGTCATATCCACCGCCGC 623
|||||||||||||||||||||| |||||||||||||||||||||||||| || |||||||
Sbjct 480 GCGGCGCGGGACTTCTCTGGGCCGGAGAAGGAGCTGTGATGACGTCATACCCTCCGCCGC 539
Query 624 ATCGGAAAGGTACTTACATCGCTTTGTTCTGGAGTATCTTCAATCTAGGCGGCGTAATCG 683
|||||||||| |||||||| || ||||||||||||||||||||||| |||||||| ||||
Sbjct 540 ATCGGAAAGGCACTTACATAGCGTTGTTCTGGAGTATCTTCAATCTCGGCGGCGTTATCG 599
Query 684 GTGGATTAATCCCGTTTATCCTAAATTACCACCGTAGCTCCGCCGCATCGGTCAACGACT 743
|||||||||||||||||||||| || ||||| ||||||||||||||||||||||||||||
Sbjct 600 GTGGATTAATCCCGTTTATCCTCAACTACCAACGTAGCTCCGCCGCATCGGTCAACGACT 659
Query 744 CGACGTATATCGCGTTCATGTGTTTCATGTTCGCCGGCGTTCTCCTCTCTTTCGGAATCC 803
||||||| || |||||||||||||||||||||||||||||||| ||||||||||| ||||
Sbjct 660 CGACGTACATAGCGTTCATGTGTTTCATGTTCGCCGGCGTTCTTCTCTCTTTCGGTATCC 719
Query 804 TTCCGGCGACCTCCGTAATCCGCAACGACGGATCTAGATGCTCTGCCGTGAAATACTCCC 863
| |||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||
Sbjct 720 TCCCGGCGACCTCCGTGATCCGTAACGACGGATCTAGATGCTCTGCCGTGAAATACTCCC 779
Query 864 GTCCGTCAACAGAAGCAGCGGCCGTGCTACGGCTATTCCTCGATCGGAAAATGCTCCTCA 923
|||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 780 GTCCGTCAACTGAAGCAGCCGCCGTGCTACGGCTATTCCTCGATCGGAAAATGCTCCTCA 839
Query 924 TTGTCCCCGCGGCTTGGGCTAGCAACTTCTTCTATAGCTATCAATTCAACAATGTGAATG 983
| ||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||
Sbjct 840 TCGTCCCCGCGGCTTGGGCTAGCAATTTCTTCTACAGCTATCAATTCAACAATGTGAATG 899
Query 984 GAATTCTCTTTAACTTAAGAACCAGAGGATTCAACAACGTTTTCTACTGGGGAGCTCAAA 1043
|| | |||||||||||||||||||||||||||||||| || |||||||||||||||||||
Sbjct 900 GACTCCTCTTTAACTTAAGAACCAGAGGATTCAACAATGTCTTCTACTGGGGAGCTCAAA 959
Query 1044 TGGCTGGATCCATTGCCATTGGTTACGTGATGGACTTCAGCTTCAAAAGCCGGAGAGCGA 1103
||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||| |
Sbjct 960 TGGCTGGATCCATCGCCATTGGTTACGTGATGGACTTCAGCTTCAAAAGCCGGCGAGCTA 1019
Query 1104 GAGGATTTGCCGGAATATCATTAGTTGCGGTAATCGGAACCATTATTTGGGCGGGAGGGT 1163
||||||| ||||||||||| |||| |||||||||||||||||||| |||||||| ||||
Sbjct 1020 GAGGATTCACCGGAATATCACTAGTCGCGGTAATCGGAACCATTATATGGGCGGGCGGGT 1079
Query 1164 TAGCGAATCAGCACGGTTACTCGTTGAACAATCTACCGGGAAAGAAACTTGATTTCAAAG 1223
|||||||||||||||||||||||||| |||| ||||||| ||||||||||||||| ||||
Sbjct 1080 TAGCGAATCAGCACGGTTACTCGTTGGACAAACTACCGGAAAAGAAACTTGATTTTAAAG 1139
Query 1224 ATTCCGGGATAGAATTTGCGGGACCTTTCGTGTTATACATGAGCTATGGATTGTTAGATG 1283
||||||||||||| ||||||||||| ||||||||||| ||||||||||||||||||||||
Sbjct 1140 ATTCCGGGATAGAGTTTGCGGGACCATTCGTGTTATATATGAGCTATGGATTGTTAGATG 1199
Query 1284 CAATGTATCAGAGTATGGTGTATTGGTTGATAGGAGCATTGGCTGATGATTCACAGACTT 1343
||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||
Sbjct 1200 CAATGTATCAGAGTATGGTTTATTGGTTGATAGGAGCATTGGCTGATGATTCGCAGACTT 1259
Query 1344 TGAGTAGATATAGTGGATTCTACAAAGGAGTGCAGAGTGCAGGAGCTGCAGTGGCTTGGC 1403
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1260 TGAGTAGATATAGTGGATTCTACAAAGGAGTGCAGAGTGCAGGAGCTGCAGTGGCTTGGC 1319
Query 1404 AAGTGGATACTCGTAAGGTTCCGTTAATGTCACAGCTTATTGTTAATTGGTCACTTACTA 1463
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1320 AAGTGGATACTCGTAAGGTTCCGTTAATGTCACAGCTTATTGTTAATTGGTCACTTACTA 1379
Query 1464 CTGTAAGTTATCCTTTACTGGTTCTTCTTGTGTATTTTTATGTTAAAAATGATAATGATG 1523
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 1380 CTGTAAGTTATCCTTTACTTGTTCTTCTTGTGTATTTTTATGTTAAAAATGATAATGATG 1439
Query 1524 ATGATAGTAATGATAAGGTTTAGA---TAGTAGTTTATTAGAACATTGAGTAAGTTTACT 1580
|||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||
Sbjct 1440 ATGATAGTAATGATAAGGTTTAGAAGATAGTAGTTTATTAGAACATTGAGTAAGTTAACT 1499
Query 1581 GTTTTTTAA 1589
|||||||||
Sbjct 1500 GTTTTTTAA 1508
Score = 73.1 bits (39), Expect = 8e-12
Identities = 41/42 (98%), Gaps = 0/42 (0%)
Strand=Plus/Plus
Query 1587 TAACAGTTACATAGAGAAACAAAGATTTGAGGCTGTGAAATG 1628
|||||||||||||||||||||||||||||||||| |||||||
Sbjct 1533 TAACAGTTACATAGAGAAACAAAGATTTGAGGCTCTGAAATG 1574
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 80421273090
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5