BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg472112 Length=1901 Score E Sequences producing significant alignments: (Bits) Value AT1G18880.1 | Symbols: | Major facilitator superfamily protein... 2953 0.0 AT1G18890.1 | Symbols: ATCDPK1, CPK10, CDPK1, AtCPK10 | calcium... 909 0.0 > AT1G18880.1 | Symbols: | Major facilitator superfamily protein | chr1:6520748-6523368 FORWARD LENGTH=1943 Length=1943 Score = 2953 bits (1599), Expect = 0.0 Identities = 1810/1909 (95%), Gaps = 25/1909 (1%) Strand=Plus/Plus Query 1 AATGGAGGTTGAGAAGACAGAGAAGAACATTACGGAGGATGATGAGTCTAAGATCATCTA 60 ||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||| Sbjct 52 AATGGAGGTTGAGAAGACAGAGAAGAACATTGCAGAGGATGATGAGTCTAAGATCATCTA 111 Query 61 CAGAGGATGGAAAGTCATGCCCTTCATCATTGGAAATGAGACATTTGAGAAGCTGGGTAT 120 |||||||||||||||||||||||||||||||||||||||||||||||| || |||| || Sbjct 112 CAGAGGATGGAAAGTCATGCCCTTCATCATTGGAAATGAGACATTTGAAAAATTGGGGAT 171 Query 121 TGTTGGGAGTTCATCGAATCTGGTCATTTACTTAACGACGGTTTTCAACATGAAGAGCAT 180 |||||| ||||||||||||||||| || |||||||||||||||||||||||||||||||| Sbjct 172 TGTTGGAAGTTCATCGAATCTGGTTATATACTTAACGACGGTTTTCAACATGAAGAGCAT 231 Query 181 CACGGCTGCGAAAGTCGTCAACATCTACGGTGGCACTAGCAACTTTGGCACCATCGTCGC 240 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 232 CACGGCTGCGAAAGTCGTCAACATCTACGGTGGCACAAGCAACTTTGGCACCATCGTCGC 291 Query 241 CGCCTTCCTCTGTGACTCCTACTTTGGCCGCTACAAGACCCTATCTTTCGCCATGATCGC 300 || |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 292 TGCTTTCCTCTGTGACTCCTACTTTGGCCGCTACAAGACCCTATCTTTCGCCATGATCGC 351 Query 301 TTGCTTTCTCGGTTCGGTGGCGATGGATCTAACGGCTGTGTTTCCTCAGCTGCATCCAGC 360 ||||||||||||||||||||| |||||||||||||||||| ||| || ||||||||||| Sbjct 352 TTGCTTTCTCGGTTCGGTGGCAATGGATCTAACGGCTGTGATTCATCCCCTGCATCCAGC 411 Query 361 TAAATGCGCTAAGGAAATAGGAAGCGTGTGCAGTGGGCCATCTATTGGACAAATCATGTT 420 | |||||||||||||||||||||||||||||| ||||||||| || |||||||||||||| Sbjct 412 TCAATGCGCTAAGGAAATAGGAAGCGTGTGCAATGGGCCATCCATCGGACAAATCATGTT 471 Query 421 TCTCGCTGGAGCAATGGTTTTGCTGGTGATTGGAGCCGGTGGGATTAGGCCGTGCAATCT 480 |||||| ||||||||||||||||||||||| |||||||||||||||||||| |||||||| Sbjct 472 TCTCGCCGGAGCAATGGTTTTGCTGGTGATCGGAGCCGGTGGGATTAGGCCATGCAATCT 531 Query 481 TCCCTTTGGTGCTGATCAGTTTGATCCGAAGACAAAAGAAGGGAGACGAGGGATTGAGAG 540 ||| ||||||||||||||||| |||||||||||||||||||||| ||||||||||||||| Sbjct 532 TCCATTTGGTGCTGATCAGTTCGATCCGAAGACAAAAGAAGGGAAACGAGGGATTGAGAG 591 Query 541 TTTCTTCAATTGGTATTTCTTCACCTTCACGTTTGCTCAGATGGTGTCGTTAACGCTCAT 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct 592 TTTCTTCAATTGGTATTTCTTCACCTTCACGTTTGCTCAGATGGTGTCGTTAACCCTCAT 651 Query 601 CGTCTATGTTCAGTCAAACGTGAGCTGGAGCATTGGTTTAGCCATCCCAGCTATTCTAAT 660 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 652 CGTCTATGTTCAGTCAAACGTGAGCTGGAGCATTGGTTTAGCCATCCCAGCTATTCTAAT 711 Query 661 GTTACTTGGTTGCATCATATTCTTCGCTGGTTCTAAGCTTTATGTCAAAGTTAAAGCTAG 720 | ||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||| Sbjct 712 GCTACTTGGTTGCATCATATTCTTCGCTGGTTCTAAGCTCTATGTCAAGGTTAAAGCTAG 771 Query 721 TGGCAGTCCCATTCACAGCATAACTCGTGTCATTGTTGTCGCCATCAAGAAGAGGCGGTT 780 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 772 TGGCAGTCCCATTCACAGCATAACTCGTGTCATTGTTGTCGCGATCAAGAAGAGGCGGTT 831 Query 781 AAAGCCCGTTGGGTCTAACGAGCTTTACAACTACATCGGGAAG-GATTTCAAGAACTCGA 839 ||||||||||||| ||||||||||||||||||||||| | || |||||||||||||||| Sbjct 832 AAAGCCCGTTGGGCCTAACGAGCTTTACAACTACATC-GCCAGTGATTTCAAGAACTCGA 890 Query 840 AACTGGGCCATACAGAGCAGTTCAGGTTTCTTGACAAATCGGCAATCCAAACACAAGATG 899 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 891 AATTGGGCCATACAGAGCAGTTCAGGTTTCTTGACAAATCGGCAATCCAAACACAAGACG 950 Query 900 ACAAGTTGAACAAAGATGGGTCGCCGGTGGATCCATGGAAACTTTGCAGTATGCAACAAG 959 ||||| |||||||||||||||||||||||||| |||||||||| |||||||||||||||| Sbjct 951 ACAAGCTGAACAAAGATGGGTCGCCGGTGGATGCATGGAAACTCTGCAGTATGCAACAAG 1010 Query 960 TGGAGGAAGTGAAATGCGTGATCCGGGTGCTTCCGGTTTGGCTCCCGGCCGCCTTATTCT 1019 |||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct 1011 TGGAGGAAGTTAAATGCGTGATCCGGGTGCTTCCGGTTTGGCTCTCGGCCGCCTTATTCT 1070 Query 1020 ACCTAGCTTACATTCAACAAACAACCTACACAATATTTCAGTCTCTTCAATCCGATAGAC 1079 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct 1071 ACCTAGCTTACATTCAACAAACAACCTACACAATCTTTCAGTCTCTTCAATCCGATAGAC 1130 Query 1080 ACCTTGGTTCAGGAAGTTTCCAGATCCCAGCCGCG-ACTTATACCGTCTTCTTAATGCTT 1138 ||||||| ||||||||||||||||||| |||| | |||||||||||||| |||||||| Sbjct 1131 GCCTTGGTCCAGGAAGTTTCCAGATCCCGGCCG-GTTCTTATACCGTCTTCCTAATGCTT 1189 Query 1139 GGAATGACAATATTCATACCAATCTATGACCGCGTCCTTGTACCTTTATC-TAGAAAGTA 1197 |||||||| ||||||||||| |||||||||||||||||||||||||| | ||||||||| Sbjct 1190 GGAATGACGATATTCATACCTATCTATGACCGCGTCCTTGTACCTTT-CCTTAGAAAGTA 1248 Query 1198 TACAGGCAAAGACGGCGGTATCACACAACTGCAGAGAGTTGGAGCAGGCA-TGTTTCTAT 1256 |||||||| ||||||||||||||||||||||||||||||||||||||| | ||||||||| Sbjct 1249 TACAGGCAGAGACGGCGGTATCACACAACTGCAGAGAGTTGGAGCAGG-ACTGTTTCTAT 1307 Query 1257 GCATCACAAGTATGATGGTGTCTGCAATTGTAGAACAATACAGAAGAAAGGTAGCTCTCA 1316 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1308 GCATCACAAGTATGATGGTGTCTGCAATTGTAGAACAATACAGAAGAAAGGTAGCTCTCA 1367 Query 1317 CAAAACCGACGCTAGGGTTTGCCCCAAGAAAAGGCGCAATCTCTTCAATGTCCGGTATGT 1376 ||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||| Sbjct 1368 CAAAACCGACGCTAGGGTTGGCCCCAAGAAAAGGCGCAATCTCTTCGATGTCCGGTATGT 1427 Query 1377 GGTTGATTCCTCAGCTAGTGCTAATGGGTATCGCGGACGCCCTTGCTGGAGTTGGACAAA 1436 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct 1428 GGTTGATTCCTCAGCTAGTGCTAATGGGTATCGCGGACGCCCTCGCTGGAGTTGGACAAA 1487 Query 1437 TGGAGTTTTATTACAAACAGTTTCCAGAGAACATGAGAAGTTTTGCTGGTTCCCTGTATT 1496 |||||||||| |||||||||||||||||||||||| |||||||||||||||| ||||||| Sbjct 1488 TGGAGTTTTACTACAAACAGTTTCCAGAGAACATGCGAAGTTTTGCTGGTTCTCTGTATT 1547 Query 1497 ATTGCGGAATTGGATTGGCGAGTTACCTCGGCACCTTTTTGTTATCGGCGGTGCACGATA 1556 |||| ||||| |||||||||||||||||| |||||||||||||||||||||| ||||||| Sbjct 1548 ATTGTGGAATCGGATTGGCGAGTTACCTCAGCACCTTTTTGTTATCGGCGGTACACGATA 1607 Query 1557 CGACAGAGGGATTTTCGGGAGGAAGCTGGCTTCCGGAAGATTTAAACAAGGGAAGATTGG 1616 | |||||||||||||| |||||||| |||||||||||||||||||||||||||||||||| Sbjct 1608 CCACAGAGGGATTTTCAGGAGGAAGTTGGCTTCCGGAAGATTTAAACAAGGGAAGATTGG 1667 Query 1617 AGTACTTCTACTTCTTGGTTGCTGGTATTATGACTCTAAACTTTGCCTATTTCTTGTTGG 1676 |||| ||||||||||||||||||||||| |||||||||||||| |||||||||||||||| Sbjct 1668 AGTATTTCTACTTCTTGGTTGCTGGTATGATGACTCTAAACTTGGCCTATTTCTTGTTGG 1727 Query 1677 TCTCACATTGGTACCGTTACAAAGATGTTGTGGCCAAGGACAAGGACATGGACAAGTCTT 1736 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 1728 TCTCACATTGGTACCGTTACAAAGATGTTGTGGCCAAGGACAAGGACATGGACAAGACTT 1787 Query 1737 CTGAC-GAGTTTGATAAGGTGTCAGTGTAATAAAGATCTGTACCTT-GACTCTTTGGTAT 1794 ||| | ||||||||||||||||||||||||||||||||| | |||| ||||||||||| | Sbjct 1788 CTG-CTGAGTTTGATAAGGTGTCAGTGTAATAAAGATCTTT-CCTTTGACTCTTTGGTTT 1845 Query 1795 AGGGCTTTGAGTTGCTTTGAGACAATAAAA-TACAACCTTTGAACAAAACATTACATACA 1853 |||| | |||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 1846 AGGG----G-----CTTTGAGACAATAAAAATACAACCTTTGAACAAAACATTACATACA 1896 Query 1854 AA-TACAATGTAAAATGTTTTTTATATATAAAAGGACCATAGCTTCCGT 1901 || ||||||||||||||||| | |||| |||| | |||||||||||||| Sbjct 1897 AAATACAATGTAAAATGTTTAT-ATATGTAAA-GAACCATAGCTTCCGT 1943 > AT1G18890.1 | Symbols: ATCDPK1, CPK10, CDPK1, AtCPK10 | calcium-dependent protein kinase 1 | chr1:6522764-6525962 REVERSE LENGTH=2568 Length=2568 Score = 909 bits (492), Expect = 0.0 Identities = 579/618 (94%), Gaps = 17/618 (3%) Strand=Plus/Minus Query 1288 AGAACAATACAGAAGAAAGGTAGCTCTCACAAAACCGACGCTAGGGTTTGCCCCAAGAAA 1347 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 2568 AGAACAATACAGAAGAAAGGTAGCTCTCACAAAACCGACGCTAGGGTTGGCCCCAAGAAA 2509 Query 1348 AGGCGCAATCTCTTCAATGTCCGGTATGTGGTTGATTCCTCAGCTAGTGCTAATGGGTAT 1407 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 2508 AGGCGCAATCTCTTCGATGTCCGGTATGTGGTTGATTCCTCAGCTAGTGCTAATGGGTAT 2449 Query 1408 CGCGGACGCCCTTGCTGGAGTTGGACAAATGGAGTTTTATTACAAACAGTTTCCAGAGAA 1467 |||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 2448 CGCGGACGCCCTCGCTGGAGTTGGACAAATGGAGTTTTACTACAAACAGTTTCCAGAGAA 2389 Query 1468 CATGAGAAGTTTTGCTGGTTCCCTGTATTATTGCGGAATTGGATTGGCGAGTTACCTCGG 1527 |||| |||||||||||||||| ||||||||||| ||||| |||||||||||||||||| | Sbjct 2388 CATGCGAAGTTTTGCTGGTTCTCTGTATTATTGTGGAATCGGATTGGCGAGTTACCTCAG 2329 Query 1528 CACCTTTTTGTTATCGGCGGTGCACGATACGACAGAGGGATTTTCGGGAGGAAGCTGGCT 1587 ||||||||||||||||||||| |||||||| |||||||||||||| |||||||| ||||| Sbjct 2328 CACCTTTTTGTTATCGGCGGTACACGATACCACAGAGGGATTTTCAGGAGGAAGTTGGCT 2269 Query 1588 TCCGGAAGATTTAAACAAGGGAAGATTGGAGTACTTCTACTTCTTGGTTGCTGGTATTAT 1647 ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| || Sbjct 2268 TCCGGAAGATTTAAACAAGGGAAGATTGGAGTATTTCTACTTCTTGGTTGCTGGTATGAT 2209 Query 1648 GACTCTAAACTTTGCCTATTTCTTGTTGGTCTCACATTGGTACCGTTACAAAGATGTTGT 1707 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2208 GACTCTAAACTTGGCCTATTTCTTGTTGGTCTCACATTGGTACCGTTACAAAGATGTTGT 2149 Query 1708 GGCCAAGGACAAGGACATGGACAAGTCTTCTGAC-GAGTTTGATAAGGTGTCAGTGTAAT 1766 ||||||||||||||||||||||||| |||||| | ||||||||||||||||||||||||| Sbjct 2148 GGCCAAGGACAAGGACATGGACAAGACTTCTG-CTGAGTTTGATAAGGTGTCAGTGTAAT 2090 Query 1767 AAAGATCTGTACCTT-GACTCTTTGGTATAGGGCTTTGAGTTGCTTTGAGACAATAAAA- 1824 |||||||| | |||| ||||||||||| ||||| | |||||||||||||||| Sbjct 2089 AAAGATCTTT-CCTTTGACTCTTTGGTTTAGGG----G-----CTTTGAGACAATAAAAA 2040 Query 1825 TACAACCTTTGAACAAAACATTACATACAAA-TACAATGTAAAATGTTTTTTATATATAA 1883 ||||||||||||||||||||||||||||||| ||||||||||||||||| | |||| ||| Sbjct 2039 TACAACCTTTGAACAAAACATTACATACAAAATACAATGTAAAATGTTTAT-ATATGTAA 1981 Query 1884 AAGGACCATAGCTTCCGT 1901 | | |||||||||||||| Sbjct 1980 A-GAACCATAGCTTCCGT 1964 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 94126021875 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5