BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg472122 Length=1678 Score E Sequences producing significant alignments: (Bits) Value AT1G18990.1 | Symbols: | Protein of unknown function, DUF593 |... 2638 0.0 AT1G74830.1 | Symbols: | Protein of unknown function, DUF593 |... 169 1e-40 > AT1G18990.1 | Symbols: | Protein of unknown function, DUF593 | chr1:6558678-6560489 REVERSE LENGTH=1732 Length=1732 Score = 2638 bits (1428), Expect = 0.0 Identities = 1601/1684 (95%), Gaps = 13/1684 (1%) Strand=Plus/Plus Query 1 TATCTTCGTGATCGCTTCTTGCAATCACAATAATGTCTAACCGTTCCTTCAAGAATTTCA 60 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 26 TATCTTCGTGATCGCTTTTTGCAATCACAATAATGTCTAACCGTTCCTTCAAGAATTTCA 85 Query 61 TAGAAGAAGAACTTGGAACATTCCCGCAGTTCTTAATCTACGCTCTTCTTGAATGGATCC 120 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 86 TAGAAGAAGAACTTGGAACATTCCCACAGTTCTTAATCTACGCTCTTCTTGAATGGATCC 145 Query 121 TCATCATTATCCTCTTCATTGATGGCTTCCTTGCTTTCTTCTCTAACCAAATCGCTAAAT 180 ||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||| Sbjct 146 TCATCATTATCCTCTTCATCGATGGCTTCCTCGCTTTCTTCTCTAACCAAATCGCTAAAT 205 Query 181 TCTTTGACCTTAAAATCCCCTGTCTTCTCTGCACTAGACTCGACCATGTTCTTGTCAGAA 240 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 206 TCTTTGACCTCAAAATCCCCTGTCTTCTCTGCACTAGACTCGACCATGTTCTTGTCAGCA 265 Query 241 GAAACCCTGATTTCTATTACAACGACTCGATATGCGATGCTCACAAGAAGAATGTCTCAT 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 266 GAAACCCTGATTTCTATTACAACGACTCGATATGCGATGCTCACAAGAAGAATGTCTCAT 325 Query 301 CTCTCGCTTACTGTCATGTTCACAAGAAACTCTCTGAGATCAAACGAATGTGTGAAGGAT 360 ||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||| Sbjct 326 CTCTCGCTTACTGTCATGTGCACAAGAAACTCTCTGAGATCAAACGTATGTGTGAAGGAT 385 Query 361 GTCTTCTTTCTTTCGCCACCGAGAAAGAATCAGATGTTGATACTTACAAGTCTCTTATTG 420 ||||||| |||||||| |||||||||||| |||||||||||||||||||||||||||||| Sbjct 386 GTCTTCTCTCTTTCGCTACCGAGAAAGAAACAGATGTTGATACTTACAAGTCTCTTATTG 445 Query 421 GAATCTTACATAAGGATCTTGAGCTTCTTATCGACGATGAACGTGAGCTTCAATTGGCTT 480 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 446 GAATCTTGCATAAGGATCTTGAGCTTCTTATCGACGATGAACGTGAGCTTCAATTGGCGT 505 Query 481 TTCCAGCTGCGGGTTCGAAGAAAGATGAAAACTTCTATCAGGTTGATCAGAGAACTAACA 540 |||| | ||||||||||||||||||||||||||||||||||||||| | |||||||||| Sbjct 506 TTCCGGTTGCGGGTTCGAAGAAAGATGAAAACTTCTATCAGGTTGAGAACAGAACTAACA 565 Query 541 ATAGCAATGACAGGTTTCACAAACAGCAACGTTGTTCTTGTTGTGGGCAGCTATTGAAGC 600 ||||||||||||||||||| | ||||||||||||||||||||||||||| || |||||| Sbjct 566 ATAGCAATGACAGGTTTCAGAGGCAGCAACGTTGTTCTTGTTGTGGGCAGATAATGAAGC 625 Query 601 TGAAATCCGAAAAACCGAAGAACAATAACCAATCTTTCTTCGCAGCTCCTAGTCCGTCTC 660 |||||||||| ||||| |||| |||||| |||||||| |||| |||||||||||| |||| Sbjct 626 TGAAATCCGATAAACCTAAGAGCAATAATCAATCTTTTTTCGGAGCTCCTAGTCCATCTC 685 Query 661 CTAGAGTTTCATTCAATCAAAGAACTTTGGATTTGTCTAACATTAAATACACGGATTCAC 720 ||||||||||||| || |||||||||||||||||||||||||||||||||||||||| | Sbjct 686 CTAGAGTTTCATTTAACCAAAGAACTTTGGATTTGTCTAACATTAAATACACGGATTTGC 745 Query 721 CCGAGGATGATGATGCTGTT-AACACGAAAGGCGCTTCAG-TGGATTCAGTTGATGACAG 778 | ||||||||||||||| || ||||||||||||||||| | ||||| ||||||||||||| Sbjct 746 CTGAGGATGATGATGCT-TTGAACACGAAAGGCGCTTC-GTTGGATGCAGTTGATGACAG 803 Query 779 AACTCCGAGTTTTGTTAAAGGAGGCAATAAATTCTTTGGCATTCCGCTTTCTGATTCGGC 838 ||||||||||||||| |||||||| ||||| ||||||||||||||||||||||| ||||| Sbjct 804 AACTCCGAGTTTTGTAAAAGGAGGTAATAAGTTCTTTGGCATTCCGCTTTCTGACTCGGC 863 Query 839 TCAGAATAGTCCGCGATGGTCTGTTCGATCTATGAAGAAATCTCT-GATTGATCAGAATG 897 |||||||||||||||||||||||||||||| |||||||||||| | | |||||||||||| Sbjct 864 TCAGAATAGTCCGCGATGGTCTGTTCGATCAATGAAGAAATCTTTCG-TTGATCAGAATG 922 Query 898 GTTCGGAGAGCGAAGTGTTGGATGGAGATTCGATACTTCAGCATCTAAATAGACAGGTTA 957 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 923 GTTTGGAGAGCGAAGTGTTGGATGGAGATTCGATACTTCAGCATCTAAATAGACAGGTTA 982 Query 958 GATTGGACCGTAAGTCATTGATGGATTTGTACATGGAGTTAGACGAAGAGAGGAGTGCTT 1017 ||||||| || ||||| |||||||||||||| ||||||||||| |||||||||||||||| Sbjct 983 GATTGGATCGCAAGTCGTTGATGGATTTGTATATGGAGTTAGATGAAGAGAGGAGTGCTT 1042 Query 1018 CAGCTGTTGCAGCAAACAATGCAATGGCTATGATCACAAGACTTCAAGCCGAGAAAGCTG 1077 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 1043 CAGCTGTTGCAGCAAACAATGCAATGGCTATGATCACAAGACTTCAAGCAGAGAAAGCTG 1102 Query 1078 CGGTTCAAATGGAGGCATTGCAGTATCAGAGAATGATGGATGAGCAAGCGGAATATGATC 1137 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 1103 CGGTTCAAATGGAGGCATTGCAGTATCAGAGAATGATGGATGAGCAAGCAGAATATGATC 1162 Query 1138 AAGAAGCTTTGCAGTCTATGAATGGCTTGTTGGTTAAGAGAGAAGAGGAAATGAAAGAGC 1197 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 1163 AAGAAGCTTTGCAGTCTATGAATGGTTTGTTGGTTAAGAGAGAAGAGGAAATGAAAGAGC 1222 Query 1198 TTGAAGCTGAAATTGAAGTTTATAGATTGAGATATGGATTGTTGAGAGAAG---GAGGAG 1254 ||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 1223 TTGAAGCTGGAATTGAAGTTTATAGATTGAGATATGGATTGTTGAGAGAAGAAAGAGGAG 1282 Query 1255 AAGCAGAAGAGTTTCTTGATGAAGAGACTAAACCGGTCTCAGAATTGCCTGTTTGTTCTT 1314 ||||||| ||||||||||||||||| ||||||||||| ||||| |||||||||||||||| Sbjct 1283 AAGCAGAGGAGTTTCTTGATGAAGAAACTAAACCGGTTTCAGATTTGCCTGTTTGTTCTT 1342 Query 1315 CAAATCATGAAGAAGATTTAGAACAAATGAAAGATTCAGCTGAGGATTCTAAAGCCAACA 1374 ||||||||||||||||||| ||||||||||||||||||||||||||||||| || ||| | Sbjct 1343 CAAATCATGAAGAAGATTTGGAACAAATGAAAGATTCAGCTGAGGATTCTATAGGCAATA 1402 Query 1375 ATGGTGTGATGATCATAGAGGAAGAAAAAGAGAATGGAAGCAGAAAAGATGTGTTAGTGA 1434 ||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 1403 ATGGTGTGATGATTATAGAGGAAGAAAAAGAGAATGGAAGCAGAAAAGATATGTTAGTGA 1462 Query 1435 AGGAAATCTCAGAGATTACAGAGAGACTAAATGCAATTGAATCAAAAGGTGAATTGTTGC 1494 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1463 AGGAAATTTCAGAGATTACAGAGAGACTAAATGCAATTGAATCAAAAGGTGAATTGTTGC 1522 Query 1495 AGCAAATTTCAGATGTTTTAGATGTTAGTGAAGGAGAAGCAATTCTATTACAGATATCTC 1554 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1523 AGCAAATTTCAGATGTTTTAGATGTTAGTGAAGGAGAAGCAATTCTATTACAGATATCTC 1582 Query 1555 AAAATCTGCATATGCTTCGTAGTTTCATTGAAATGCCATCAGAATCATGAATCTCTTTAC 1614 | |||||||||||||||||||||||||||||||||||| ||||||||||||||| ||| Sbjct 1583 AGAATCTGCATATGCTTCGTAGTTTCATTGAAATGCCAACAGAATCATGAATCTGTTT-- 1640 Query 1615 TTACTTAAGATATCAAATCAACATCCTTGTATCAAATCTGTATGTAACTGATACTGACAA 1674 | |||||||| |||||| |||||||||||| || ||||||||||||||||||||||||| Sbjct 1641 T-ACTTAAGAAATCAAAACAACATCCTTGT-TCTAATCTGTATGTAACTGATACTGACAG 1698 Query 1675 TTTT 1678 |||| Sbjct 1699 TTTT 1702 > AT1G74830.1 | Symbols: | Protein of unknown function, DUF593 | chr1:28113423-28115229 REVERSE LENGTH=1711 Length=1711 Score = 169 bits (91), Expect = 1e-40 Identities = 175/216 (81%), Gaps = 4/216 (2%) Strand=Plus/Plus Query 1391 AGAGGAAGAAAAAGAGAATGGAAGCAGAAAAGATGTGTTAGTGAAGGAAATCTCAGAGAT 1450 ||| |||||||||| || | ||| || ||||| | | |||| || || | |||||||| Sbjct 1446 AGATGAAGAAAAAGGGAGT-GAA--AGCAAAGAAGGGATAGTAAAAGAGCTTTCAGAGAT 1502 Query 1451 TACAGAGAGACTAAATGCAATTGAATCAAAAGGTGAATTGTTGCAGCAAATTTCAGATGT 1510 ||||||||||||| | | || ||||||| ||||| || ||| | || ||| | ||||| Sbjct 1503 CACAGAGAGACTAAGTACTCTTCAATCAAATGGTGATTTATTGAAACACATTGCTGATGT 1562 Query 1511 TTTAGATGTTAGTGAAGGAGAAGCAATTCTATTACAGATATCTCAAAATCTGCATATGCT 1570 ||| ||||||||||||||||||||||||||||| ||||||||||| ||| |||| ||||| Sbjct 1563 TTTGGATGTTAGTGAAGGAGAAGCAATTCTATTGCAGATATCTCAGAATTTGCACATGCT 1622 Query 1571 TCGTAGTTTCATTGAAATGCCATCAGAATC-ATGAA 1605 ||||||||| ||| ||||| || ||||| ||||| Sbjct 1623 TCGTAGTTTTGTTGCTATGCCTTCTGAATCCATGAA 1658 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 82931300340 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5