BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg472133 Length=849 Score E Sequences producing significant alignments: (Bits) Value AT1G19115.3 | Symbols: | unknown protein; FUNCTIONS IN: molecu... 918 0.0 > AT1G19115.3 | Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G72490.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr1:6606237-6607346 FORWARD LENGTH=791 Length=791 Score = 918 bits (497), Expect = 0.0 Identities = 593/636 (93%), Gaps = 20/636 (3%) Strand=Plus/Plus Query 1 ATTGACAGAAAAAGAAAATTTCTTGGAGATCATTGACAGAAAAAGAAATTTTCTTGGATA 60 ||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||| Sbjct 11 ATTGACAGAAAAAGAAAATTTCTTGGAGAACATTGACAGAAAAAGAAAATTTCTTGGATA 70 Query 61 AACACACATATACATGTGC--TT-T-TAT--ATGTCTCTGAAATATGAAGATTTTTAGTT 114 |||||||| |||||||||| || | ||| ||||||||||||||||||||||||||||| Sbjct 71 AACACACACATACATGTGCTTTTATATATGCATGTCTCTGAAATATGAAGATTTTTAGTT 130 Query 115 GGGTTCAAAGAAAGCTTAGCGGAAAGAAGCATGAGCCTACTTCAGATTCTTCTCAAGAAT 174 |||||||||||||||||||||||||||||| || ||||||||||||||||||||||||| Sbjct 131 GGGTTCAAAGAAAGCTTAGCGGAAAGAAGCGTGTGCCTACTTCAGATTCTTCTCAAGAAC 190 Query 175 CATTAGGTCCTCCTTTGAGTAAAGAAGTCCAAGGTTTGCCTCAAGACGAAGAAACCTTCT 234 ||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 191 CATCAAGTCCTCCTTTGAGTAAAGAAGTCCAAGGTTTGCCTCAAGACGAAGAAACCTTCT 250 Query 235 TAGCCATTGGAACACTTGGAAACAATCTC-TGCCC---C---AAG--GAAGAAGAAGAAA 285 ||||||| |||||||||||||||||| || | ||| | ||| ||||||||||||| Sbjct 251 TAGCCATCGGAACACTTGGAAACAATATCTTCCCCAAGCAAGAAGAAGAAGAAGAAGAAA 310 Query 286 CAGATTCTAGCAAATTAGATCTAACTGCGGTTAATACAGATGTTACTATTGGGAAGAAGA 345 ||||||||||| || |||| ||||| |||||||||||||||||||||| |||||||||| Sbjct 311 CAGATTCTAGC-AA--AGATATAACTCCGGTTAATACAGATGTTACTATCGGGAAGAAGA 367 Query 346 AATCACTTTCTTTTCTTCTCAAGAAGATGTTTGTTTGCACAAGTGGCTTCAAAACTCCAC 405 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 368 AATCGCTTTCTTTTCTTCTCAAGAAGATGTTTGTTTGCACAAGTGGCTTCAAAACTCCAC 427 Query 406 CTCCTCTTCTTGATTTGTCTAGAGGAGATTCATTGCACAATACACGAATGGAAAAGATGC 465 |||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||| Sbjct 428 CTCCTCTTCTTGATTTATCTAGAGGAGATTCATTGCACAACACACGAATGGAAAAGATGC 487 Query 466 TTAGGACAATACTCAACAAGAAGATACATCCACAACGTTCAAATTCTATTGCAAAGAAGT 525 | ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 488 TAAGGACAATACTCAACAAGAAGATACATCCACAACGTTCAAATTCTATAGCAAAGAAGT 547 Query 526 ACTTGGAGAA-TCATCATAAGTTTGTAGATGAAGCTCGTTCAAGTGTTGACGCCAACAAA 584 ||||||| || | |||||||| || | ||||||||||||||||||||||||||||||||| Sbjct 548 ACTTGGA-AAGTAATCATAAGATTATGGATGAAGCTCGTTCAAGTGTTGACGCCAACAAA 606 Query 585 TGGGTCAAGACTGATTCTGAATGTGAGATTTTCTAA 620 |||||||||||||||||||||||||||||||||||| Sbjct 607 TGGGTCAAGACTGATTCTGAATGTGAGATTTTCTAA 642 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 41392937128 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5